niman

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Everything posted by niman

  1. Anticipate weekly updates.
  2. Ongoing investigation in Georgia
  3. Immediate notification report Report reference: REF OIE 23367, Report Date: 24/03/2017, Country : China (People's Rep. of) Report Summary Name of sender of the report Dr Zhang Zhongqui Telephone (86-10) 591 928 28 Position Director General Fax (86-10) 591 928 45 Address No.11, Nongzhanguan Nanli Chaoyang District Beijing, 100125 Beijing Email chinadelegate@agri.gov.cn Date submitted to OIE 24/03/2017 Animal type Terrestrial Date of report 24/03/2017 Disease Highly pathogenic avian influenza Date of start of the event 19/03/2017 Causal Agent Highly pathogenic avian influenza virus Date of confirmation of the event 24/03/2017 Serotype(s) H7N9 Diagnosis Clinical, Laboratory (basic), Laboratory (advanced) Reason New strain of a listed disease Clinical signs Yes Country or zone a zone or compartment Number of reported outbreaks submitted= 1, Draft= 0 Outbreak details Province Number of outbreaks City County Unit Type Location Latitude Longitude Start Date End Date: HUNAN- (this report - submitted) - Dongan Farm Yongzhou 26.389 111.311 19/03/2017 Species Measuring units Susceptible Cases Deaths Destroyed Slaughtered Birds Animals 189676 29760 18497 171179 0 Affected Population The event was observed in local layer farm by active surveillance. Outbreak summary: Total outbreaks = 1 (Submitted) Species Susceptible Cases Deaths Destroyed Slaughtered Birds 189676 29760 18497 171179 0 http://www.oie.int/wahis_2/temp/reports/en_imm_0000023367_20170324_164234.pdf
  4. Japan has issue a ban for a new region in Alabama. The center of the restriction zone is a farm in Pickens Co Alabama near the border with Tusaloosa. Therefore the exclusion zone covers areas in both counties. The center of the circle is on a farm owned by Peco Foods. https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Japan
  5. Japan has now banned poultry in a restriction zone centered in Christian County, Kentucky, which extends to Todd County https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/Japan
  6. Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1k-KvqZz3R_Dhe4TOrFD7aYv34Hs&ll=36.87094919945865%2C-87.595331053125&z=10
  7. Kentucky - Poultry slaughtered on or after February 23, 2017, which originated from or passed through or is slaughtered/processed within the zone shown on the attached map is ineligible. Within the zone, poultry slaughtered and processed before February 23 , 2017 is eligible.*
  8. Peco Foods https://www.pecofoods.com/avianflu.php
  9. Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1k-KvqZz3R_Dhe4TOrFD7aYv34Hs&ll=33.30384513352203%2C-87.8713778043213&z=14
  10. Poultry slaughtered on or after February 14, 2017, which originated from or passed through or is slaughtered/processed within the zones shown on the attached maps (2 pages) is ineligible. Within those zones, poultry slaughtered and processed before February 14 , 2017 is eligible.*
  11. Poultry meat and poultry meat products from Lincoln, Franklin, and Moore Counties in Tennessee and Madison and Jackson Counties in Alabama produced on or after March 4, 2017 are not eligible to export to or transit via the European Union. Poultry meat and poultry meat products from Lincoln, Franklin, and Moore Counties in Tennessee and Madison and Jackson Counties in Alabama produced prior to March 4, 2017 are eligible.* https://www.fsis.usda.gov/wps/portal/fsis/topics/international-affairs/exporting-products/export-library-requirements-by-country/European-Union
  12. EU has banned poultry from Moore County Tennessee, suggesting further H7N9 spread.
  13. Align Segment-ID Name Score E-Value Identity EPI959439 A/mute swan/Poland/64/2017 (A/H5N5) segment 8 (NS) 1460.0 0.000000e+00 790/790 (100%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI925950 A/gadwall/Chany/97/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI959429 A/chicken/Poland/79A/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 780/787 (99%) EPI952643 A/chicken/Korea/H903/2017 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 782/791 (98%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1408.3 0.000000e+00 779/790 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 780/790 (98%) EPI959420 A/domestic goose/Poland/33/2016 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI952801 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI942939 A/turkey/England/003778/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1393.5 0.000000e+00 779/791 (98%)
  14. National Veterinary Research Institut Poland has release sequences for all 8 gene segments from 2017 H5N5 isolate from a mute swan.
  15. Align Segment-ID Name Score E-Value Identity EPI959438 A/mute swan/Poland/64/2017 (A/H5N5) segment 5 (NP) 2730.5 0.000000e+00 1478/1478 (100%) EPI926005 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 5 (NP) 2658.4 0.000000e+00 1465/1478 (99%) EPI889966 A/mallard duck/Netherlands/7/2014 (A/H6N2) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI687188 A/chicken/Scotland/532/2016 (A/H5N1) segment 5 (NP) 2564.3 0.000000e+00 1449/1479 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2553.2 0.000000e+00 1446/1478 (97%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI942171 A/duck/Ganzhou/GZ5/2015 (A/H4N6) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI909468 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI925997 A/mallard/Chany/355/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925989 A/gadwall/Chany/315/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925981 A/mallard/Chany/313/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI889141 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI601684 A/duck/Jiangxi/3961/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1438/1475 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI583947 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2518.1 0.000000e+00 1439/1477 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI664214 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2514.4 0.000000e+00 1440/1479 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI618599 A/mallard/Sweden/107688/2009 (A/H10N1) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI470377 A/wild duck/Jiangxi/19831/2009 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI891012 A/turnstone/Netherlands/1/2010 (A/H3N8) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602448 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602441 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602403 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602396 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602389 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602382 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602375 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602368 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602343 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602336 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602329 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599873 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599866 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599859 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599852 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599845 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599838 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599831 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI392508 A/pintail/Korea/1173/09 (A/H7N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI315101 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602434 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 5 (NP) 2501.5 0.000000e+00 1437/1479 (97%) EPI891060 A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI889265 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI602427 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI470441 A/wild waterfowl/Hong Kong/MPM2121/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470440 A/wild waterfowl/Hong Kong/MPL705/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470438 A/common teal/Hong Kong/MPL634/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470436 A/common teal/Hong Kong/MPM1645/2011 (A/H7N1) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470411 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%)
  16. Align Segment-ID Name Score E-Value Identity EPI959440 A/mute swan/Poland/64/2017 (A/H5N5) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2134/2152 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI909467 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3829.2 0.000000e+00 2123/2148 (98%) EPI959430 A/chicken/Poland/79A/2016 (A/H5N8) segment 3 (PA) 3825.5 0.000000e+00 2124/2151 (98%) EPI869808 A/duck/France/161108h/2016 (A/H5N8) segment 3 (PA) 3823.7 0.000000e+00 2124/2151 (98%) EPI887467 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI959418 A/domestic goose/Poland/33/2016 (A/H5N8) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI895128 A/whooper swan/Korea/Gangjin 49_2/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895105 A/whooper swan/Korea/Gangjin 48/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895095 A/environment/Korea/W544/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895094 A/environment/Korea/W543/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895093 A/environment/Korea/W542/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895092 A/environment/Korea/W541/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3618.7 0.000000e+00 2087/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2087/2153 (96%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI890596 A/greater white-fronted goose/Netherlands/1/2012 (A/H1N1) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%) EPI891127 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%)
  17. Align Segment-ID Name Score E-Value Identity EPI959441 A/mute swan/Poland/64/2017 (A/H5N5) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI942215 A/duck/Hubei/ZYSYG3/2015 (A/H6N2) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704534 A/duck/Mongolia/709/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704526 A/duck/Mongolia/626/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704509 A/duck/Mongolia/499/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI942217 A/duck/Hubei/ZYSYG8/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI942216 A/duck/Hubei/ZYSYG7/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704396 A/duck/Mongolia/520/2015 (A/H1N1) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704501 A/duck/Mongolia/326/2015 (A/H10N3) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI704479 A/duck/Mongolia/245/2015 (A/H10N3) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI704297 A/duck/Mongolia/141/2015 (A/H0N2) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI618043 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 2 (PB1) 3991.7 0.000000e+00 2236/2274 (98%) EPI891424 A/mallard duck/Netherlands/26/2010 (A/H4N6) segment 2 (PB1) 3986.2 0.000000e+00 2236/2275 (98%) EPI617988 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI617899 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI617760 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI891371 A/mallard duck/Netherlands/6/2013 (A/H3N8) segment 2 (PB1) 3953.0 0.000000e+00 2229/2274 (98%) EPI891426 A/mallard duck/Netherlands/26/2011 (A/H11N9) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI618617 A/mallard/Sweden/133546/2011 (A/H10N4) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI891301 A/greater white-fronted goose/Netherlands/2/2010 (A/H5N2) segment 2 (PB1) 3925.3 0.000000e+00 2224/2274 (97%) EPI514974 A/mallard/Sweden/80261/2008 (A/H4N9) segment 2 (PB1) 3914.2 0.000000e+00 2222/2274 (97%) EPI464920 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 2 (PB1) 3914.2 0.000000e+00 2218/2268 (97%) EPI623944 A/chicken/England/26352/2015 (A/H7N7) segment 2 (PB1) 3908.6 0.000000e+00 2221/2274 (97%) EPI629347 A/chicken/NL-Barneveld/15004745-006-010/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI629339 A/Chicken/NL-Barneveld/15004745-001-005/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI540405 A/waterfowl/Bangladesh/12301/2013 (A/H6N7) segment 2 (PB1) 3877.2 0.000000e+00 2215/2274 (97%) EPI940659 A/duck/India/11CL01/2014 (A/H6N2) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI372361 A/shoveler/Egypt/14879-NAMRU3/2006 (A/H7N1) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI560057 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 2 (PB1) 3866.2 0.000000e+00 2212/2272 (97%) EPI182047 A/common eider/Netherlands/1/2006 (A/H3N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI617954 A/Mediterranean gull/Republic of Georgia/1/2011 (A/H9N3) segment 2 (PB1) 3853.2 0.000000e+00 2211/2274 (97%) EPI617793 A/yellow-legged gull/Republic of Georgia/1/2012 (A/H0) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI887466 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI839726 A/chicken/France/150169a/2015 (A/H5N1) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704370 A/duck/Mongolia/211/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704362 A/duck/Mongolia/208/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704313 A/duck/Mongolia/167/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693704 A/duck/Mongolia/83/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693696 A/duck/Mongolia/20/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI464928 A/chicken/Italy/11VIR-7548/2011 (A/H5N2) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI959417 A/domestic goose/Poland/33/2016 (A/H5N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI617820 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI891412 A/mallard duck/Netherlands/30/2010 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI891408 A/mallard duck/Netherlands/67/2008 (A/H10N7) segment 2 (PB1) 3786.8 0.000000e+00 2199/2274 (96%) EPI891297 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 2 (PB1) 3786.8 0.000000e+00 2200/2275 (96%) EPI891469 A/mallard duck/Netherlands/1/2009 (A/H10N7) segment 2 (PB1) 3781.2 0.000000e+00 2198/2274 (96%) EPI345434 A/Larus argentatus/Belgium/02936cls9/2010 (A/H5N2) segment 2 (PB1) 3777.5 0.000000e+00 2193/2267 (96%) EPI891291 A/mallard duck/Netherlands/29/2009 (A/H11N9) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464944 A/chicken/Italy/12VIR-7785-67/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464936 A/turkey/Italy/12VIR-6607-5/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI618937 A/mallard/Sweden/101165/2009 (A/H8N4) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI618407 A/mallard/Sweden/101589/2009 (A/H11N9) segment 2 (PB1) 3770.1 0.000000e+00 2197/2275 (96%) EPI464952 A/turkey/Italy/12VIR-8036-2/2012 (A/H5N2) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI891326 A/greater white-fronted goose/Netherlands/4/2011 (A/H1N1) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI618651 A/mallard/Sweden/69794/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618636 A/mallard/Sweden/68529/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618622 A/mallard/Sweden/60069/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618605 A/mallard/Sweden/107688/2009 (A/H10N1) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI211183 A/mallard/Poland/16/09 (A/H7N7) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618014 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI687185 A/chicken/Scotland/532/2016 (A/H5N1) segment 2 (PB1) 3749.8 0.000000e+00 2149/2209 (97%) EPI891374 A/mallard duck/Netherlands/51/2010 (A/H1N1) segment 2 (PB1) 3748.0 0.000000e+00 2192/2274 (96%) EPI475930 A/mallard/Iceland/1007/2011 (A/H3N6) segment 2 (PB1) 3742.4 0.000000e+00 2191/2274 (96%) EPI618448 A/mallard/Sweden/101993/2009 (A/H2N9) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI457917 A/duck/Guangxi/GXd-4/2011 (A/H1N2) segment 2 (PB1) 3736.9 0.000000e+00 2190/2274 (96%) EPI378008 A/mallard/Netherlands/29/2010 (A/H2N3) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI891447 A/mallard duck/Netherlands/7/2011 (A/H4N6) segment 2 (PB1) 3735.0 0.000000e+00 2190/2274 (96%) EPI387542 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 2 (PB1) 3725.8 0.000000e+00 2189/2275 (96%) EPI891361 A/Eurasian wigeon/Netherlands/1/2010 (A/H5N2) segment 2 (PB1) 3720.3 0.000000e+00 2187/2274 (96%) EPI475944 A/great black-backed gull/Iceland/1110/2011 (A/H5N2) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI457909 A/duck/Guangxi/GXd-1/2011 (A/H1N2) segment 2 (PB1) 3714.7 0.000000e+00 2186/2274 (96%) EPI367587 A/mallard/Czech Republic/15008-11K/2009 (A/H5N3) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI485721 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI439584 A/avian/Israel/289/2001 (A/H6N2) segment 2 (PB1) 3709.2 0.000000e+00 2185/2274 (96%) EPI236192 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI433380 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI367595 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI284355 A/mallard/Czech Republic/15902-17K/2009 (A/H6N2) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI891346 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI891336 A/greater white-fronted goose/Netherlands/6/2010 (A/H6N2) segment 2 (PB1) 3698.1 0.000000e+00 2184/2275 (96%) EPI891221 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI439586 A/avian/Israel/320/2001 (A/H6N2) segment 2 (PB1) 3694.4 0.000000e+00 2182/2274 (95%) EPI618214 A/mallard/Sweden/1689/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI618201 A/mallard/Sweden/1645/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI617059 A/mallard/Sweden/1671/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI891316 A/greater white-fronted goose/Netherlands/1/2011 (A/H6N8) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI618139 A/mallard/Sweden/1690/2002 (A/H7N7) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI692423 A/duck/Guangxi/S1107/2010 (A/H4N6) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI285821 A/avian/Egypt/920431/2006 (A/H9N2) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI692454 A/duck/Guizhou/S1167/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI692430 A/duck/Guangxi/S1211/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI540165 A/duck/Bangladesh/1578/2009 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI540157 A/duck/Bangladesh/1595/2010 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI336987 A/duck/Zhejiang/2245/2011 (A/H5N1) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI229961 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI173879 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI169291 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI167837 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI891458 A/greater white-fronted goose/Netherlands/1/2007 (A/H1N1) segment 2 (PB1) 3670.4 0.000000e+00 2179/2275 (95%)
  18. Align Segment-ID Name Score E-Value Identity EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2232/2280 (97%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3945.6 0.000000e+00 2242/2295 (97%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI704478 A/duck/Mongolia/245/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%) EPI890976 A/mallard duck/Netherlands/2/2011 (A/H10N7) segment 1 (PB2) 3917.9 0.000000e+00 2237/2295 (97%) EPI890786 A/mallard duck/Netherlands/47/2010 (A/H10N7) segment 1 (PB2) 3912.3 0.000000e+00 2236/2295 (97%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3910.5 0.000000e+00 2213/2261 (97%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3906.8 0.000000e+00 2231/2289 (97%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3890.2 0.000000e+00 2232/2295 (97%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3868.0 0.000000e+00 2229/2296 (97%) EPI942332 A/duck/Shanghai/602/2009 (A/H10N8) segment 1 (PB2) 3856.9 0.000000e+00 2226/2295 (96%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI889413 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 1 (PB2) 3840.3 0.000000e+00 2223/2295 (96%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3840.3 0.000000e+00 2214/2281 (97%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3823.7 0.000000e+00 2202/2268 (97%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3812.6 0.000000e+00 2219/2296 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3812.6 0.000000e+00 2210/2282 (96%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3801.5 0.000000e+00 2217/2296 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3794.1 0.000000e+00 2192/2261 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3792.3 0.000000e+00 2194/2264 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3786.8 0.000000e+00 2215/2296 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3786.8 0.000000e+00 2214/2295 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3779.4 0.000000e+00 2213/2296 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3757.2 0.000000e+00 2199/2281 (96%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3748.0 0.000000e+00 2170/2240 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3740.6 0.000000e+00 2197/2282 (96%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3731.4 0.000000e+00 2180/2259 (96%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3731.4 0.000000e+00 2204/2295 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3729.5 0.000000e+00 2195/2282 (96%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3724.0 0.000000e+00 2194/2282 (96%) EPI959432 A/chicken/Poland/79A/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI959416 A/domestic goose/Poland/33/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3718.4 0.000000e+00 2203/2297 (95%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3718.4 0.000000e+00 2193/2282 (96%) EPI869806 A/duck/France/161108h/2016 (A/H5N8) segment 1 (PB2) 3712.9 0.000000e+00 2200/2295 (95%) EPI618400 A/mallard/Sweden/79984/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618386 A/mallard/Sweden/79436/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618372 A/mallard/Sweden/80079/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 3709.2 0.000000e+00 2194/2287 (95%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3707.3 0.000000e+00 2189/2280 (96%) EPI618365 A/mallard/Sweden/80253/2008 (A/H11N9) segment 1 (PB2) 3707.3 0.000000e+00 2201/2297 (95%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3701.8 0.000000e+00 2190/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3701.8 0.000000e+00 2200/2297 (95%)
  19. Descriptions Align Segment-ID Name Score E-Value Identity EPI931201 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 7 (MP) 1391.6 0.000000e+00 753/753 (100%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI959427 A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI959421 A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942946 A/chicken/Wales/000023/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942938 A/turkey/England/003778/2017 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI931196 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI930842 A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI919638 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI917482 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916524 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916387 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 748/753 (99%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 746/749 (99%) EPI916606 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI952800 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI925951 A/gadwall/Chany/97/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 749/754 (99%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI952642 A/chicken/Korea/H903/2017 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1352.9 0.000000e+00 746/753 (99%)
  20. Align Segment-ID Name Score E-Value Identity EPI888601 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 6 (NA) 2555.0 0.000000e+00 1387/1389 (99%) EPI873621 A/mute swan/Croatia/102/2016 (A/H5N5) segment 6 (NA) 2544.0 0.000000e+00 1385/1389 (99%) EPI680489 A/common redshank/Singapore/F83-2/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI680487 A/common redshank/Singapore/F83-1/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678380 A/common redshank/Singapore/F83-2/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678379 A/common redshank/Singapore/F83-1/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI940483 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 6 (NA) 2405.5 0.000000e+00 1304/1305 (99%) EPI600154 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 6 (NA) 2405.5 0.000000e+00 1360/1389 (97%) EPI399897 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI314739 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI461090 A/duck/Guangxi/GXd-1/2009 (A/H6N5) segment 6 (NA) 2316.8 0.000000e+00 1344/1389 (96%) EPI268287 A/duck/Hunan/5613/2003 (A/H6N5) segment 6 (NA) 2255.9 0.000000e+00 1333/1389 (95%) EPI600798 A/migratory duck/Jiangxi/7231/2003 (A/H10N5) segment 6 (NA) 2244.8 0.000000e+00 1331/1389 (95%) EPI600792 A/migratory duck/Jiangxi/6847/2003 (A/H10N5) segment 6 (NA) 2228.2 0.000000e+00 1328/1389 (95%) EPI618625 A/mallard/Sweden/343/2002 (A/H12N5) segment 6 (NA) 2200.5 0.000000e+00 1323/1389 (95%) EPI377768 A/mallard/Sweden/30/2002 (A/H2N5) segment 6 (NA) 2194.9 0.000000e+00 1322/1389 (95%) EPI296546 A/Bewicks swan/Netherlands/1/2007 (A/H1N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI190186 A/mallard/Switzerland/WV4060167/2006 (A/H3N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI618665 A/mallard/Sweden/2213/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618645 A/mallard/Sweden/69794/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI618630 A/mallard/Sweden/68529/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI514607 A/mallard/Sweden/50709/2006 (A/H4N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI251818 A/mallard/Sweden/86/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618616 A/mallard/Sweden/60069/2007 (A/H12N5) segment 6 (NA) 2156.2 0.000000e+00 1316/1390 (94%) EPI618602 A/mallard/Sweden/50968/2006 (A/H12N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI296562 A/black-headed gull/Netherlands/1/2006 (A/H4N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI890453 A/greater white-fronted goose/Netherlands/3/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI760593 A/wigeon/Italy/6127-23/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI618810 A/mallard/Sweden/69773/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI618769 A/mallard/Sweden/69792/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI463356 A/mallard/Sweden/100127/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463355 A/mallard/Sweden/100117/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463353 A/mallard/Sweden/100103/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI251663 A/mallard/Netherlands/2/1999 (A/H3N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI174859 A/mallard/Denmark/77-64590-5/2005 (A/H7N5) segment 6 (NA) 2122.9 0.000000e+00 1311/1391 (94%) EPI345387 A/Arenaria interpres/Belgium/02936pcs1/2010 (A/H12N5) segment 6 (NA) 2111.8 0.000000e+00 1308/1390 (94%) EPI295953 A/duck/Yangzhou/013/2008 (A/H6N5) segment 6 (NA) 2111.8 0.000000e+00 1307/1389 (94%) EPI476025 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1307/1390 (94%) EPI316866 A/mallard/Czech Republic/14924-1/2007 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1306/1389 (94%) EPI397609 A/sentinel mallard/Germany/sum156/2007 (A/H6N5) segment 6 (NA) 2100.8 0.000000e+00 1306/1390 (93%) EPI259429 A/duck/Hokkaido/111/2009 (A/H1N5) segment 6 (NA) 2100.8 0.000000e+00 1305/1389 (93%) EPI476092 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI476074 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328876 A/duck/Eastern China/031/2009 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328868 A/duck/Eastern China/008/2008 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1304/1389 (93%) EPI160652 A/duck/Hokkaido/24/04 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI160651 A/duck/Mongolia/149/03 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI1871 A/duck/Hokkaido/1058/01 (A/H4N5) segment 6 (NA) 2089.7 0.000000e+00 1305/1391 (93%) EPI476059 A/black-headed gull/Iceland/1298/2011 (A/H10N5) segment 6 (NA) 2084.1 0.000000e+00 1304/1391 (93%) EPI181656 A/duck/Tsukuba/255/2005 (A/H8N5) segment 6 (NA) 2078.6 0.000000e+00 1304/1392 (93%) EPI363513 A/duck/Guizhou/888/2006 (A/H6N5) segment 6 (NA) 2073.1 0.000000e+00 1302/1391 (93%) EPI534745 A/mallard/Finland/10952/2008 (A/H4N5) segment 6 (NA) 2071.2 0.000000e+00 1297/1385 (93%) EPI764880 A/duck/Bangladesh/18-C/2013 (A/H1N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI357827 A/duck/Mongolia/OIE-7457/2011 (A/H3N5) segment 6 (NA) 2067.5 0.000000e+00 1300/1390 (93%) EPI268286 A/duck/Guangxi/1455/2004 (A/H6N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI1887 A/duck/Hokkaido/66/01 (A/H12N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI102207 A/duck/Taiwan/WB459/04 (A/H6N5) segment 6 (NA) 2062.0 0.000000e+00 1300/1391 (93%) EPI299316 A/avian/Japan/8KI0040/2008 (A/H3N5) segment 6 (NA) 2056.4 0.000000e+00 1300/1392 (93%) EPI764882 A/duck/Bangladesh/33-O/2013 (A/H2N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI442027 A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 6 (NA) 2050.9 0.000000e+00 1296/1389 (93%) EPI268283 A/duck/Guangxi/585/2005 (A/H6N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI493827 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI493819 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI338864 A/aquatic bird/Korea/W69/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI299284 A/avian/Japan/8KI0135/2008 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1298/1392 (93%) EPI181654 A/duck/Tsukuba/11/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI268285 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI181655 A/duck/Shiga/69/2006 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI268284 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1296/1392 (93%) EPI268282 A/duck/Hunan/748/2005 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1295/1391 (93%) EPI493835 A/duck/Guangdong/wy24/2008 (A/H5N5) segment 6 (NA) 2028.7 0.000000e+00 1293/1390 (93%) EPI618588 A/mallard/Sweden/3328/2003 (A/H12N5) segment 6 (NA) 2012.1 0.000000e+00 1289/1389 (92%) EPI182107 A/mallard/Netherlands/11/2007 (A/H6N5) segment 6 (NA) 1995.5 0.000000e+00 1289/1392 (92%) EPI442003 A/goose/Shandong/k1204/2009 (A/H5N5) segment 6 (NA) 1993.7 0.000000e+00 1264/1356 (93%) EPI889488 A/mallard duck/Netherlands/13/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI408363 A/wild duck/Korea/SH12-7/2008 (A/H10N5) segment 6 (NA) 1990.0 0.000000e+00 1287/1391 (92%) EPI221527 A/Anas plathyrhynchos/Spain/1252/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI454768 A/ruddy turnstone/Delaware/AI03-162/2003 (A/H0) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI454761 A/ruddy turnstone/Delaware/AI03-165/2003 (A/H9N5) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI343733 A/shorebird/Delaware Bay/246/2003 (A/H9N5) segment 6 (NA) 1978.9 0.000000e+00 1286/1392 (92%) EPI574266 A/mule duck/Bulgaria/674/2010 (A/H6N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI454689 A/ruddy turnstone/Delaware/AI03-193/2003 (A/H9N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI617866 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 6 (NA) 1967.8 0.000000e+00 1287/1395 (92%) EPI315149 A/duck/Vietnam/G18/2009 (A/H12N5) segment 6 (NA) 1956.7 0.000000e+00 1283/1393 (92%) EPI534755 A/mallard/Finland/13016/2008 (A/H12N5) segment 6 (NA) 1916.1 0.000000e+00 1202/1284 (93%) EPI399888 A/duck/HuBei/03/2010 (A/H5N5) segment 6 (NA) 1895.8 0.000000e+00 1271/1392 (91%) EPI395082 A/swine/Hubei/10/2008 (A/H10N5) segment 6 (NA) 1895.8 0.000000e+00 1270/1391 (91%) EPI816852 A/chinstrap penguin/Antarctica/B04/2015 (A/H5N5) segment 6 (NA) 1890.2 0.000000e+00 1270/1392 (91%) EPI774536 A/Chinstrap penguin/Antarctica/15459/2015 (A/H5N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI316499 A/chicken/Hubei/119/1983 (A/H10N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI407981 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI3007 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI704456 A/duck/Hong Kong/934/1980 (A/H10N5) segment 6 (NA) 1862.5 0.000000e+00 1265/1392 (90%) EPI442011 A/goose/Guangdong/k0103/2010 (A/H5N5) segment 6 (NA) 1851.5 0.000000e+00 1262/1391 (90%) EPI418314 A/duck/Vietnam/OIE-707/2011 (A/H11N5) segment 6 (NA) 1812.7 0.000000e+00 1258/1394 (90%) EPI290489 A/common murre/Oregon/19497-004/2005 (A/H9N5) segment 6 (NA) 1785.0 0.000000e+00 1252/1393 (89%) EPI184639 A/mallard/Gurjev/263/1982 (A/H14N5) segment 6 (NA) 1785.0 0.000000e+00 1223/1350 (90%) EPI700304 A/duck/Cambodia/1426W44M3/2013 (A/H2N5) segment 6 (NA) 1707.4 0.000000e+00 1229/1379 (89%) EPI407910 A/shearwater/Australia/1/1973 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%) EPI242559 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%)
  21. Align Segment-ID Name Score E-Value Identity EPI931200 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI888600 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI873619 A/mute swan/Croatia/102/2016 (A/H5N5) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI916604 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI952639 A/chicken/Korea/H903/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI943320 A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI930838 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI919636 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI959435 A/chicken/Poland/002/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI952782 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI942943 A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI930843 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI925956 A/gadwall/Chany/97/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI931194 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931145 A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931110 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1683/1704 (98%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1671/1686 (99%) EPI916503 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI916385 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1684/1705 (98%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI959433 A/chicken/Poland/114/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI942935 A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI917480 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%)