September 2015 Iowa Swine Match 2012 Cases

niman · November 17, 2015

USDA has released Iowa swine sequences from a September 28 collection which matches human 2012 cases.

niman · November 17, 2015

LOCUS       KT924265                1701 bp    cRNA    linear   VRL 14-NOV-2015
DEFINITION  Influenza A virus (A/swine/Iowa/A01944211/2015(H3N2)) segment 4
            hemagglutinin (HA) gene, complete cds.
ACCESSION   KT924265
VERSION     KT924265.1  GI:949601209
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Iowa/A01944211/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Iowa/A01944211/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Iowa/A01944211/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Iowa/A01944211/2015"
                     /serotype="H3N2"
                     /isolation_source="oral fluid"
                     /host="swine"
                     /db_xref="taxon:1739956"
                     /segment="4"
                     /country="USA: Iowa"
                     /collection_date="28-Sep-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALN12297.1"
                     /db_xref="GI:949601210"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKEWDL
                     FVERSTAYSNCYPYYVPDYATLRSLVASSGNLEFTQESFNWTGVAQDGSSYACRRGSV
                     KSFFSRLNWLHNLDYKYPEQNVTMPNNDEFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIHWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSISNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQARGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLESTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEXEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYNHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGSIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01944211.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctaa ttttcgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctgggacacc atgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caaggaatgg
      301 gaccttttcg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgccaccc ttagatcact agttgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagttatg cctgcagaag aggatctgtt
      481 aaaagtttct tcagtagatt gaattggttg cataacctgg attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacgaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaggacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtgtgtcca gcataataag catccattgg acgatagtaa aaccgggtga catactcttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca tttccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccttg aaattggcta caggaatgcg aaatgtacca
     1021 gagaaacaag ctagaggcat attcggtgca attgcaggtt tcatagaaaa tggttgggaa
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac tggacaagca
     1141 gcagatcttg aaagcactca agcagcaatc aaccaaatca ccggaaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctctga artagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aatgcctgca taggatcaat cagaaatgga
     1501 acttataacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa aatcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggtcc attatgtggg cttgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · November 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI586062	A/swine/Iowa/A01478820/2015 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1688/1701 (99%)
EPI573469	A/swine/Iowa/A01840226/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1701 (99%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI393298	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI392696	A/Indiana/43/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI392693	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI388362	A/Indiana/16/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI394060	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1672/1701 (98%)
EPI392699	A/Indiana/46/2012 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1672/1701 (98%)
EPI533925	A/swine/South Dakota/A01481392/2014 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397404	A/Indiana/99/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI396239	A/Indiana/103/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI395251	A/Indiana/152/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI394063	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI392705	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1671/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1671/1701 (98%)
EPI397204	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1671/1701 (98%)
EPI509753	A/swine/Nebraska/A01491558/2014 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI488005	A/swine/USA/A01291038/2013 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1672/1702 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1672/1702 (98%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI392748	A/Wisconsin/22/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI392735	A/Pennsylvania/13/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI414156	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI397562	A/Wisconsin/29/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI397206	A/Ohio/34/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI396277	A/Indiana/135/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI396200	A/Ohio/79/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI388290	A/Indiana/17/2012 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI506265	A/swine/Nebraska/A01395901/2013 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI493688	A/swine/Iowa/13E045/2013 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI446871	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI446838	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI443542	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI443534	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI443518	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI443510	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI440751	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI427184	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI426908	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI407279	A/Minnesota/18/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI401687	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI401676	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI400095	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI398040	A/Ohio/57/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI397912	A/Indiana/114/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI397654	A/Indiana/90/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI397555	A/Ohio/86/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI397211	A/Indiana/113/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI396291	A/Ohio/63/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI395956	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI395948	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI395940	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI395932	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI395740	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI394069	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI378523	A/Indiana/09/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI378515	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI378502	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI392684	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1669/1701 (98%)
EPI550135	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI530344	A/swine/Iowa/A01480817/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI509734	A/swine/Iowa/13H075/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI508811	A/swine/Minnesota/A01366913/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI506274	A/swine/Nebraska/A01393702/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI400101	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI397961	A/Ohio/88/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI397759	A/Wisconsin/35/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI397412	A/Michigan/16/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI397106	A/Indiana/115/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI397092	A/Indiana/57/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI396246	A/Indiana/125/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI396230	A/Indiana/147/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395891	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395858	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395850	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395732	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395725	A/swine/Indiana/A01104029/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395335	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1668/1701 (98%)
EPI393661	A/Ohio/62/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI392708	A/Indiana/59/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI392934	A/Minnesota/11/2012 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI392711	A/Indiana/60/2012 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI515309	A/swine/Kansas/13-152087/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI508788	A/swine/Nebraska/A01491325/2014 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI506253	A/swine/Nebraska/A01395921/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI492947	A/swine/Iowa/A01365608/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI492437	A/swine/Iowa/A01364803/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI472195	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1669/1702 (98%)
EPI472183	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI460375	A/swine/Indiana/A01260280/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI453566	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI446735	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI406469	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI397677	A/Ohio/83/2012 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI395331	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2957.6	0.000000e+00	1667/1701 (98%)
EPI550128	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI550079	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI546878	A/swine/Ohio/13TOSU1560/2013 (A/H0) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI539058	A/swine/South Dakota/A01481928/2014 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI527985	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI527981	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI527090	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI527085	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI504870	A/swine/Iowa/A01290867/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI502658	A/swine/Minnesota/A01409450/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI499946	A/swine/Iowa/13H087/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI484447	A/swine/North Carolina/A01364613/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI484441	A/swine/Ohio/A01364406/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI482825	A/Iowa/04/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI468206	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI468198	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI467958	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI465422	A/Indiana/05/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI465420	A/Indiana/17/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI465391	A/Indiana/09/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI465382	A/Indiana/05/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI465379	A/Indiana/17/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI464503	A/Indiana/04/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI464500	A/Indiana/05/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI462227	A/Indiana/15/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI461883	A/Indiana/09/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI460974	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI459618	A/swine/Michigan/A01432678/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI457281	A/swine/Korea/CY02-08/2012 (A/H3N1) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI457109	A/swine/Korea/CY02-07/2012 (A/H3N1) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)

niman · November 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI586063	A/swine/Iowa/A01478820/2015 (A/H3N2) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI597692	A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI573470	A/swine/Iowa/A01840226/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI558899	A/swine/Iowa/A01566473/2014 (A/H1N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI597689	A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI600310	A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI590498	A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI545881	A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI545777	A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI542568	A/swine/South Dakota/A01482581/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI538921	A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI531098	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI623636	A/swine/Iowa/A02077681/2015 (A/H1N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI600302	A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI586093	A/swine/Minnesota/A01489541/2015 (A/H1N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI641412	A/swine/Minnesota/A01822846/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI612581	A/swine/Illinois/A01554475/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI612536	A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI612518	A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI612515	A/swine/Ohio/A02077256/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586161	A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586146	A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586143	A/swine/Illinois/A01478910/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586134	A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586131	A/swine/Illinois/A01478979/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586122	A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586119	A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586069	A/swine/Indiana/A01840743/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586036	A/swine/Indiana/A01840753/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586033	A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI586015	A/swine/Illinois/A01840755/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI584741	A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI573573	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI558863	A/swine/Iowa/A01477772/2014 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI612557	A/swine/Illinois/A02077158/2015 (A/H1N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI671811	A/swine/Indiana/A02025965/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI653058	A/swine/Indiana/A01260910/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI653037	A/swine/Indiana/A01260906/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI653023	A/swine/Indiana/A01260885/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI653016	A/swine/Indiana/A01260888/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI641835	A/swine/Illinois/A02034146/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI641618	A/swine/Illinois/A02024907/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI641542	A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI621372	A/swine/Illinois/A01820488/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI612719	A/swine/Illinois/A01820457/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI597683	A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI590669	A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI586158	A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI586149	A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI586137	A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI584791	A/swine/Indiana/A02077078/2015 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI538991	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI620509	A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI612539	A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI584815	A/swine/Indiana/A02077077/2015 (A/H1N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI573440	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI669219	A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI641536	A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI623695	A/swine/Indiana/A01260875/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI620615	A/swine/Indiana/A02024006/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI620609	A/swine/Indiana/A02077457/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI620541	A/swine/Indiana/A02077486/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI620500	A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI590795	A/swine/Illinois/A01470861/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI584794	A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI573052	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545853	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI508859	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI669234	A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI669228	A/swine/Iowa/A02025827/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI620646	A/swine/Illinois/A02077350/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI612725	A/swine/Illinois/A01820414/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI612549	A/swine/Illinois/A01471010/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510215	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510200	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510191	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510174	A/swine/Illinois/A01411461/2014 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI641533	A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 6 (NA)	2495.9	0.000000e+00	1390/1410 (98%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2495.9	0.000000e+00	1390/1410 (98%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2495.9	0.000000e+00	1390/1410 (98%)
EPI669140	A/swine/Oklahoma/A01770672/2015 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI663396	A/swine/Illinois/A01769612/2015 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI647529	A/swine/Illinois/A02025282/2015 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI620706	A/swine/Illinois/A01470835/2015 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI586039	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI573739	A/swine/Indiana/A01260735/2014 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1391/1411 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI663399	A/swine/Iowa/A02025573/2015 (A/H1N2) segment 6 (NA)	2492.3	0.000000e+00	1389/1410 (98%)
EPI647508	A/swine/Illinois/A02025300/2015 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI645060	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI645052	A/swine/Illinois/A02090176/2015 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI641444	A/swine/Indiana/A02077934/2015 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI623685	A/swine/Illinois/A01822445/2015 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI459619	A/swine/Michigan/A01432678/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)

niman · November 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI586064	A/swine/Iowa/A01478820/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI568714	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI531099	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI573471	A/swine/Iowa/A01840226/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI620634	A/swine/Iowa/A01554775/2015 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI597642	A/swine/Iowa/A01476877/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI597636	A/swine/Iowa/A01476878/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI559571	A/swine/Iowa/A01476715/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI559214	A/swine/Minnesota/A01483483/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI557798	A/swine/Minnesota/A01566467/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545854	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538922	A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI530311	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI508898	A/swine/Illinois/A01409928/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI508860	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI508838	A/swine/Illinois/A01409932/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505041	A/swine/Illinois/A01410018/2013 (A/H0) segment 7 (MP)	1785.0	0.000000e+00	976/982 (99%)
EPI671794	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI597693	A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI586040	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI586004	A/swine/Iowa/A01489235/2015 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI573740	A/swine/Indiana/A01260735/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI568683	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI558900	A/swine/Iowa/A01566473/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI558864	A/swine/Iowa/A01477772/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545778	A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530301	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530286	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI663318	A/swine/Illinois/A01770246/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI654000	A/swine/Minnesota/A01823864/2015 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI645061	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI642508	A/Michigan/39/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI641413	A/swine/Minnesota/A01822846/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI600311	A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI597690	A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI559529	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI545880	A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	976/983 (99%)
EPI502748	A/swine/USA/A01409276/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1773.9	0.000000e+00	974/981 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI641619	A/swine/Illinois/A02024907/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI641537	A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI641534	A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI623699	A/swine/Indiana/A01260874/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI623637	A/swine/Iowa/A02077681/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI620647	A/swine/Illinois/A02077350/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI620501	A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612540	A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612537	A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612516	A/swine/Ohio/A02077256/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI600301	A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI597684	A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI590670	A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586162	A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586159	A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586150	A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586147	A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586144	A/swine/Illinois/A01478910/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586138	A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586135	A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586123	A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586120	A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586070	A/swine/Indiana/A01840743/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI586016	A/swine/Illinois/A01840755/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI584816	A/swine/Indiana/A02077077/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI584795	A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI584792	A/swine/Indiana/A02077078/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI584742	A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI584736	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)

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September 2015 Iowa Swine Match 2012 Cases

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