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Panel of Full Zika Sequences From 2013 French Polynesia Outbreak

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Aix Marseille Universite has released 9 full Zika sequences from the 2013/2014 Zika outbreak in French Polynesia.

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325 325 100% 1e-85 100% KX447517.1
325 325 100% 1e-85 100% KX447516.1
325 325 100% 1e-85 100% KX447515.1
325 325 100% 1e-85 100% KX447514.1
325 325 100% 1e-85 100% KX447513.1
325 325 100% 1e-85 100% KX447512.1
325 325 100% 1e-85 100% KX447511.1
325 325 100% 1e-85 100% KX447510.1
325 325 100% 1e-85 100% KX447509.1

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LOCUS       KX447517               10654 bp    RNA     linear   VRL 14-AUG-2016
DEFINITION  Zika virus isolate 1_0038_PF polyprotein gene, complete cds.
ACCESSION   KX447517
VERSION     KX447517.1  GI:1041521226
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10654)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Zika virus outbreak in French Polynesia, 2013-2014
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10654)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2016) Umr190, Aix Marseille Universite, 27 Bd
            Jean Moulin, Marseille 13005, France
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 8.5.1
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10654
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="1_0038_PF"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="French Polynesia"
                     /collection_date="Jan-2014"
                     /note="Vero cells; one passage;
                     genotype: Asian"
     CDS             85..10356
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ANO46309.1"
                     /db_xref="GI:1041521227"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEAALGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQTLIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 actgcgacag ttcgagtttg aagcgaaagc tagcaacagt atcaacaggt tttattttgg
       61 atttggaaac gagagtttct ggtcatgaaa aacccaaaaa agaaatccgg aggattccgg
      121 attgtcaata tgctaaaacg cggagtagcc cgtgtgagcc cctttggggg cttgaagagg
      181 ctgccagccg gacttctgct gggtcatggg cccatcagga tggtcttggc gattctagcc
      241 tttttgagat tcacggcaat caagccatca ctgggtctca tcaatagatg gggttcagtg
      301 gggaaaaaag aggctatgga aataataaag aagttcaaga aagatctggc tgccatgctg
      361 agaataatca atgccaggaa ggagaagaag agacgaggcg cagatactag tgtcggaatt
      421 gttggcctcc tgctgaccac agctatggca gcggaggtca ctagacgtgg gagtgcatac
      481 tatatgtact tggacagaaa cgatgctggg gaggccatat cttttccaac cacattgggg
      541 atgaataagt gttatataca gatcatggat cttggacaca tgtgcgatgc caccatgagc
      601 tatgaatgcc ctatgctgga tgagggggtg gaaccagatg acgtcgattg ttggtgcaat
      661 acgacgtcaa cttgggttgt gtacggaacc tgccatcaca aaaaaggtga agcacggaga
      721 tctagaagag ctgtgacgct cccctcccat tccactagga agctgcaaac gcggtcgcaa
      781 acctggttgg aatcaagaga atacacaaag cacttgatta gagtcgaaaa ttggatattc
      841 aggaaccctg gcttcgcgtt agcagcagct gccatcgctt ggcttttggg aagctcaacg
      901 agccaaaaag tcatatactt ggtcatgata ctgctgattg ccccggcata cagcatcagg
      961 tgcataggag tcagcaatag ggactttgtg gaaggtatgt caggtgggac ttgggttgat
     1021 gttgtcttgg aacatggagg ttgtgtcacc gtaatggcac aggacaaacc gactgtcgac
     1081 atagagctgg ttacaacaac agtcagcaac atggcggagg taagatccta ctgctatgag
     1141 gcatcaatat cggacatggc ttcggacagc cgctgcccaa cacaaggtga agcctacctt
     1201 gacaagcaat cagacactca atatgtctgc aaaagaacgt tagtggacag aggctgggga
     1261 aatggatgtg gactttttgg caaagggagc ctggtgacat gcgctaagtt tgcatgctcc
     1321 aagaaaatga ccgggaagag catccagcca gagaatctgg agtaccggat aatgctgtca
     1381 gttcatggct cccagcacag tgggatgatc gttaatgaca caggacatga aactgatgag
     1441 aatagagcga aggttgagat aacgcccaat tcaccaagag ccgaagccgc cctggggggt
     1501 tttggaagcc taggacttga ttgtgaaccg aggacaggcc ttgacttttc agatttgtat
     1561 tacttgacta tgaataacaa gcactggttg gttcacaagg agtggttcca cgacattcca
     1621 ttaccttggc acgctggggc agacaccgga actccacact ggaacaacaa agaagcactg
     1681 gtagagttca aggacgcaca tgccaaaagg caaactgtcg tggttctagg gagtcaagaa
     1741 ggagcagttc acacggccct tgctggagct ctggaggctg agatggatgg tgcaaaggga
     1801 aggctgtcct ctggccactt gaaatgtcgc ctgaaaatgg ataaacttag attgaagggc
     1861 gtgtcatact ccttgtgtac tgcagcgttc acattcacca agatcccggc tgaaacactg
     1921 cacgggacag tcacagtgga ggtacagtac gcagggacag atggaccttg caaggttcca
     1981 gctcagatgg cggtggacat gcaaactctg accccagttg ggaggttgat aaccgctaac
     2041 cctgtaatca ctgaaagcac tgagaactct aagatgatgc tggaacttga tccaccattt
     2101 ggggactctt acattgtcat aggagtcggg gagaagaaga tcacccacca ctggcacagg
     2161 agtggcagca ccattggaaa agcatttgaa gccactgtga gaggtgccaa gagaatggca
     2221 gtcttgggag acacagcctg ggactttgga tcagttggag gcgctctcaa ctcattgggc
     2281 aagggcatcc atcaaatttt tggagcagct ttcaaatcat tgtttggagg aatgtcctgg
     2341 ttctcacaaa ctctcattgg aacgttgctg atgtggttgg gtctgaacac aaagaatgga
     2401 tctatttccc ttatgtgctt ggccttaggg ggagtgttga tcttcttatc cacagccgtc
     2461 tctgctgatg tggggtgctc ggtggacttc tcaaagaagg agacgagatg cggtacaggg
     2521 gtgttcgtct ataacgacgt tgaagcctgg agggacaggt acaagtacca tcctgactcc
     2581 ccccgtagat tggcagcagc agtcaagcaa gcctgggaag atggtatctg tgggatctcc
     2641 tctgtttcaa gaatggaaaa catcatgtgg agatcagtag aaggggagct caacgcaatc
     2701 ctggaagaga atggagttca actgacggtc gttgtgggat ctgtaaaaaa ccccatgtgg
     2761 agaggtccac agagattgcc cgtgcctgtg aacgagctgc cccacggctg gaaggcttgg
     2821 gggaaatcgt acttcgtcag agcagcaaag acaaataaca gctttgtcgt ggatggtgac
     2881 acactgaagg aatgcccact caaacataga gcatggaaca gctttcttgt ggaggatcat
     2941 gggttcgggg tatttcacac tagtgtctgg ctcaaggtta gagaagatta ttcattagag
     3001 tgtgatccag ccgttattgg aacagctgtt aagggaaagg aggctgtaca cagtgatcta
     3061 ggctactgga ttgagagtga gaagaatgac acatggaggc tgaagagggc ccatctgatc
     3121 gagatgaaaa catgtgaatg gccaaagtcc cacacattgt ggacagatgg aatagaagag
     3181 agtgatctga tcatacccaa gtctttagct gggccactca gccatcacaa taccagagag
     3241 ggctacagga cccaaatgaa agggccatgg cacagtgaag agcttgaaat tcggtttgag
     3301 gaatgcccag gcactaaggt ccacgtggag gaaacatgcg gaacaagagg accatctctg
     3361 agatcaacca ctgcaagcgg aagggtgatc gaggaatggt gctgcaggga gtgcacaatg
     3421 cccccactgt cgttccgggc taaagatggc tgttggtatg gaatggagat aaggcccagg
     3481 aaagaaccag aaagtaactt agtaaggtca atggtgactg caggatcaac tgatcacatg
     3541 gatcacttct cccttggagt gcttgtgatt ctgctcatgg tgcaggaagg gctgaagaag
     3601 agaatgacca caaagatcat cataagcaca tcaatggcag tgctggtagc tatgatcctg
     3661 ggaggatttt caatgagtga cctggctaag cttgcaatct tgatgggtgc caccttcgct
     3721 gaaatgaaca ctggaggaga tgtagctcat ctggcgctga tagcggcatt caaagtcaga
     3781 ccagcgttgc tggtatcttt catcttcaga gctaattgga caccccgtga aagcatgctg
     3841 ctggccttgg cctcgtgtct tttgcaaact gcgatctccg ccttggaagg cgacctgatg
     3901 gttctcatca atggttttgc tttggcctgg ttggcaatac gagcgatggt tgttccacgc
     3961 actgataaca tcaccttggc aatcctggct gctctgacac cactggcccg gggcacactg
     4021 cttgtggcgt ggagagcagg ccttgctact tgcggggggt ttatgctcct ctctctgaag
     4081 ggaaaaggca gtgtgaagaa gaacttacca tttgtcatgg ccctgggact aaccgctgtg
     4141 aggctggtcg accccatcaa cgtggtggga ctgctgttgc tcacaaggag tgggaagcgg
     4201 agctggcccc ctagcgaagt actcacagct gttggcctga tatgcgcatt ggctggaggg
     4261 ttcgccaagg cagatataga gatggctggg cccatggccg cggtcggtct gctaattgtc
     4321 agttacgtgg tctcaggaaa gagtgtggac atgtacattg aaagagcagg tgacatcaca
     4381 tgggaaaaag atgcggaagt cactggaaac agtccccggc tcgatgtggc gctagatgag
     4441 agtggtgatt tctccctggt ggaggatgac ggtcccccca tgagagagat catactcaag
     4501 gtggtcctga tgaccatctg tggcatgaac ccaatagcca taccctttgc agctggagcg
     4561 tggtacgtat acgtgaagac tggaaaaagg agtggtgctc tatgggatgt gcctgctccc
     4621 aaggaagtaa aaaaggggga gaccacagat ggagtgtaca gagtaatgac tcgtagactg
     4681 ctaggttcaa cacaagttgg agtgggagtt atgcaagagg gggtctttca cactatgtgg
     4741 cacgtcacaa aaggatccgc gctgagaagc ggtgaaggga gacttgatcc atactgggga
     4801 gatgtcaagc aggatctggt gtcatactgt ggtccatgga agctagatgc cgcctgggac
     4861 gggcacagcg aggtgcagct cttggccgtg ccccccggag agagagcgag gaacatccag
     4921 actctgcccg gaatatttaa gacaaaggat ggggacattg gagcggttgc gctggactac
     4981 ccagcaggaa cttcaggatc tccaatccta gacaagtgtg ggagagtgat aggactttat
     5041 ggcaatgggg tcgtgatcaa aaatgggagt tatgttagtg ccatcaccca agggaggagg
     5101 gaggaagaga ctcctgttga gtgcttcgag ccttcgatgc tgaagaagaa gcagctaact
     5161 gtcttagact tgcatcctgg agctgggaaa accaggagag ttcttcctga aatagtccgt
     5221 gaagccataa aaacaagact ccgtactgtg atcttagctc caaccagggt tgtcgctgct
     5281 gaaatggagg aagcccttag agggcttcca gtgcgttata tgacaacagc agtcaatgtc
     5341 acccattctg gaacagaaat cgtcgactta atgtgccatg ccaccttcac ttcacgtcta
     5401 ctacagccaa tcagagtccc caactataat ctgtatatta tggatgaggc ccacttcaca
     5461 gatccctcaa gtatagcagc aagaggatac atttcaacaa gggttgagat gggcgaggcg
     5521 gctgccatct tcatgaccgc cacgccacca ggaacccgtg acgcatttcc ggactccaac
     5581 tcaccaatta tggacaccga agtggaagtc ccagagagag cctggagctc aggctttgat
     5641 tgggtgacgg atcattctgg aaaaacagtt tggtttgttc caagcgtgag gaacggcaat
     5701 gagatcgcag cttgtctgac aaaggctgga aaacgggtca tacagctcag cagaaagact
     5761 tttgagacag agttccagaa aacaaaacat caagagtggg actttgtcgt gacaactgac
     5821 atttcagaga tgggcgccaa ctttaaagct gaccgtgtca tagattccag gagatgccta
     5881 aagccggtca tacttgatgg cgagagagtc attctggctg gacccatgcc tgtcacacat
     5941 gccagcgctg cccagaggag ggggcgcata ggcaggaatc ccaacaaacc tggagatgag
     6001 tatctgtatg gaggtgggtg cgcagagact gacgaagacc atgcacactg gcttgaagca
     6061 agaatgctcc ttgacaatat ttacctccaa gatggcctca tagcctcgct ctatcgacct
     6121 gaggccgaca aagtagcagc cattgaggga gagttcaagc ttaggacgga gcaaaggaag
     6181 acctttgtgg aactcatgaa aagaggagat cttcctgttt ggctggccta tcaggttgca
     6241 tctgccggaa taacctacac agatagaaga tggtgctttg atggcacgac caacaacacc
     6301 ataatggaag acagtgtgcc ggcagaggtg tggaccagac acggagagaa aagagtgctc
     6361 aaaccgaggt ggatggacgc cagagtttgt tcagatcatg cggccctgaa gtcattcaag
     6421 gagtttgccg ctgggaaaag aggagcggct tttggagtga tggaagccct gggaacactg
     6481 ccaggacaca tgacagagag attccaggaa gccattgaca acctcgctgt gctcatgcgg
     6541 gcagagactg gaagcaggcc ttacaaagcc gcggcggccc aattgccgga gaccctagag
     6601 accattatgc ttttggggtt gctgggaaca gtctcgctgg gaatcttttt cgtcttgatg
     6661 aggaacaagg gcatagggaa gatgggcttt ggaatggtga ctcttggggc cagcgcatgg
     6721 ctcatgtggc tctcggaaat tgagccagcc agaattgcat gtgtcctcat tgttgtgttc
     6781 ctattgctgg tggtgctcat acctgagcca gaaaagcaaa gatctcccca ggacaaccaa
     6841 atggcaatca tcatcatggt agcagtaggt cttctgggct tgattaccgc caatgaactc
     6901 ggatggttgg agagaacaaa gagtgaccta agccatctaa tgggaaggag agaggagggg
     6961 gcaaccatag gattctcaat ggacattgac ctgcggccag cctcagcttg ggccatctat
     7021 gctgccttga caaccttcat taccccagcc gtccaacatg cagtgaccac ttcatacaac
     7081 aactactcct taatggcgat ggccacgcaa gctggagtgt tgtttggtat gggcaaaggg
     7141 atgccattct acgcatggga ctttggagtc ccgctgctaa tgataggttg ctactcacaa
     7201 ttaacacccc tgaccctaat agtggccatc attttgctcg tggcgcacta catgtacttg
     7261 atcccagggc tgcaggcagc agctgcgcgt gctgcccaga agagaacggc agctggcatc
     7321 atgaagaacc ctgttgtgga tggaatagtg gtgactgaca ttgacacaat gacaattgac
     7381 ccccaagtgg agaaaaagat gggacaggtg ctactcatag cagtagccgt ctccagcgcc
     7441 atactgtcgc ggaccgcctg ggggtggggg gaggctgggg ccctgatcac agctgcaact
     7501 tccactttgt gggaaggctc tccgaacaag tactggaact cctctacagc cacttcactg
     7561 tgtaacattt ttaggggaag ttacttggct ggagcttctc taatctacac agtaacaaga
     7621 aacgctggct tggtcaagag acgtgggggt ggaacaggag agaccctggg agagaaatgg
     7681 aaggcccgct tgaaccagat gtcggccctg gagttctact cctacaaaaa gtcaggcatc
     7741 accgaggtgt gcagagaaga ggcccgccgc gccctcaagg acggtgtggc aacgggaggc
     7801 catgctgtgt cccgaggaag tgcaaagctg agatggttgg tggagcgggg atacctgcag
     7861 ccctatggaa aggtcattga tcttggatgt ggcagagggg gctggagtta ctacgccgcc
     7921 accatccgca aagttcaaga agtgaaagga tacacaaaag gaggccctgg tcatgaagaa
     7981 cccatgttgg tgcaaagcta tgggtggaac atagtccgtc ttaagagtgg ggtggacgtc
     8041 tttcatatgg cggctgagcc gtgtgacacg ttgctgtgtg acataggtga gtcatcatct
     8101 agtcctgaag tggaagaagc acggacgctc agagtcctct ccatggtggg ggattggctt
     8161 gaaaaaagac caggagcctt ttgtataaaa gtgttgtgcc catacaccag cactatgatg
     8221 gaaaccctgg agcgactgca gcgtaggtat gggggaggac tggtcagagt gccactctcc
     8281 cgcaactcta cacatgagat gtactgggtc tctggagcga aaagcaacac cataaaaagt
     8341 gtgtccacca cgagccagct cctcttgggg cgcatggacg ggcccaggag gccagtgaaa
     8401 tatgaggagg atgtgaatct cggctctggc acgcgggctg tggtaagctg cgctgaagct
     8461 cccaacatga agatcattgg taaccgcatt gaaaggatcc gcagtgagca cgcggaaacg
     8521 tggttctttg acgagaacca cccatatagg acatgggctt accatggaag ctatgaggcc
     8581 cccacacaag ggtcagcgtc ctctctaata aacggggttg tcaggctcct gtcaaaaccc
     8641 tgggatgtgg tgactggagt cacaggaata gccatgaccg acaccacacc gtatggtcag
     8701 caaagagttt tcaaggaaaa agtggacact agggtgccag acccccaaga aggcactcgt
     8761 caggttatga gcatggtctc ttcctggttg tggaaagagc taggcaaaca caaacggcca
     8821 cgagtctgta ccaaagaaga gttcatcaac aaggttcgta gcaatgcagc attaggggca
     8881 atatttgaag aggaaaaaga gtggaagact gcagtggaag ctgtgaacga tccaaggttc
     8941 tgggctctag tggacaagga aagagagcac cacctgagag gagagtgcca gagttgtgtg
     9001 tacaacatga tgggaaaaag agaaaagaaa caaggggaat ttggaaaggc caagggcagc
     9061 cgcgccatct ggtatatgtg gctaggggct agatttctag agttcgaagc ccttggattc
     9121 ttgaacgagg atcactggat ggggagagag aactcaggag gtggtgttga agggctggga
     9181 ttacaaagac tcggatatgt cctagaagag atgagtcgca taccaggagg aaggatgtat
     9241 gcagatgaca ctgctggctg ggacacccgc atcagcaggt ttgatctgga gaatgaagct
     9301 ctaatcacca accaaatgga gaaagggcac agggccttgg cgttggccat aatcaagtac
     9361 acataccaaa acaaagtggt aaaggtcctt agaccagctg aaaaagggaa gacagttatg
     9421 gacattattt cgagacaaga ccaaaggggg agcggacaag ttgtcactta cgctcttaac
     9481 acatttacca acctagtggt gcaactcatt cggaatatgg aggctgagga agttctagag
     9541 atgcaagact tgtggctgct gcggaggtca gagaaagtga ccaactggtt gcagagcaac
     9601 ggatgggata ggctcaaacg aatggcagtc agtggagatg attgcgttgt gaagccaatt
     9661 gatgataggt ttgcacatgc cctcaggttc ttgaatgata tgggaaaagt taggaaggac
     9721 acacaagagt ggaaaccctc aactggatgg gacaactggg aagaagttcc gttttgctcc
     9781 caccacttca acaagctcca tctcaaggac gggaggtcca ttgtggttcc ctgccgccac
     9841 caagatgaac tgattggccg ggcccgcgtc tctccagggg cgggatggag catccgggag
     9901 actgcttgcc tagcaaaatc atatgcgcaa atgtggcagc tcctttattt ccacagaagg
     9961 gacctccgac tgatggccaa tgccatttgt tcatctgtgc cagttgactg ggttccaact
    10021 gggagaacta cctggtcaat ccatggaaag ggagaatgga tgaccactga agacatgctt
    10081 gtggtgtgga acagagtgtg gattgaggag aacgaccaca tggaagacaa gaccccagtt
    10141 acgaaatgga cagacattcc ctatttggga aaaagggaag acttgtggtg tggatctctc
    10201 atagggcaca gaccgcgcac cacctgggct gagaacatta aaaacacagt caacatggtg
    10261 cgcaggatca taggtgatga agaaaagtac atggactacc tatccaccca agttcgctac
    10321 ttgggtgaag aagggtctac acctggagtg ctgtaagcac caatcttagt gttgtcaggc
    10381 ctgctagtca gccacagctt ggggaaagct gtgcagcctg tgaccccccc aggagaagct
    10441 gggaaaccaa gcctatagtc aggccgagaa cgccatggca cggaagaagc catgctgcct
    10501 gtgagcccct cagaggacac tgagtcaaaa aaccccacgc gcttggaggc gcaggatggg
    10561 aaaagaaggt ggcgaccttc cccacccttc aatctggggc ctgaactgga gatcagctgt
    10621 ggatctccag aagagggact agtggttaga ggag

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
18525 18525 100% 0.0 100% KX447517.1
18447 18447 100% 0.0 99% KX447509.1
18444 18444 100% 0.0 99% KX447512.1
18444 18444 100% 0.0 99% KX369547.1
18444 18444 100% 0.0 99% KJ776791.1
18438 18438 100% 0.0 99% KX447515.1
18435 18435 100% 0.0 99% KX447514.1
18435 18435 100% 0.0 99% KX447513.1
18429 18429 100% 0.0 99% KX447516.1
18429 18429 100% 0.0 99% KX447511.1
18426 18426 100% 0.0 99% KX447510.1
18399 18399 100% 0.0 99% KU509998.3
18381 18381 100% 0.0 99% KX280026.1
18381 18381 100% 0.0 99% KX051563.1
18375 18375 100% 0.0 99% KU991811.1
18375 18375 100% 0.0 99% KU707826.1
18375 18375 100% 0.0 99% KU365779.1
18375 18375 100% 0.0 99% KU321639.1
18366 18366 100% 0.0 99% KU729218.1
18363 18363 100% 0.0 99% KX262887.1
18363 18363 100% 0.0 99% KX197192.1
18363 18363 100% 0.0 99% KU365780.1
18357 18357 100% 0.0 99% KX117076.1
18357 18357 100% 0.0 99% KU365777.1
18354 18354 100% 0.0 99% KU758877.1
18354 18354 100% 0.0 99% KX247646.1
18354 18354 100% 0.0 99% KX198135.1
18354 18354 100% 0.0 99% KX156776.1
18354 18354 100% 0.0 99% KU926309.1
18350 18350 99% 0.0 99% KU497555.1
18348 18348 100% 0.0 99% KX185891.1
18348 18348 100% 0.0 99% KX156774.1
18348 18348 100% 0.0 99% KU963796.1
18348 18348 100% 0.0 99% KU940228.1
18348 18348 100% 0.0 99% KU647676.1
18345 18345 100% 0.0 99% KU820897.3
18345 18345 100% 0.0 99% KX253996.1
18345 18345 100% 0.0 99% KX156775.1
18345 18345 100% 0.0 99% KX087102.1
18345 18345 100% 0.0 99% KU955589.1
18345 18345 100% 0.0 99% KU820899.2
18345 18345 100% 0.0 99% KU501217.1
18345 18345 100% 0.0 99% KU365778.1
18345 18345 100% 0.0 99% KU312312.1
18341 18341 100% 0.0 99% KX266255.1
18339 18339 100% 0.0 99% KU866423.2
18339 18339 100% 0.0 99% KU729217.2
18339 18339 100% 0.0 99% KU527068.1
18339 18339 100% 0.0 99% KU501216.1
18336 18336 100% 0.0 99% KX247632.1
18336 18336 100% 0.0 99% KU937936.1
18336 18336 100% 0.0 99% KU501215.1
18330 18330 100% 0.0 99% KX601168.1
18330 18330 100% 0.0 99% KX520666.1
18330 18330 100% 0.0 99% KX087101.2
18330 18330 100% 0.0 99% KU922960.1
18327 18327 100% 0.0 99% KX548902.1
18327 18327 100% 0.0 99% KX446951.1
18327 18327 100% 0.0 99% KX377337.1
18327 18327 100% 0.0 99% KU926310.1
18327 18327 100% 0.0 99% KU922923.1
18327 18327 100% 0.0 99% KU853013.1
18325 18325 100% 0.0 99% KU853012.1
18321 18321 100% 0.0 99% KX446950.1
18321 18321 100% 0.0 99% KU870645.1
18318 18318 100% 0.0 99% KU820898.1
18312 18312 100% 0.0 99% KX056898.1
18312 18312 100% 0.0 99% KU955590.1
18309 18309 100% 0.0 99% KU740184.2
18309 18309 100% 0.0 99% KU761564.1
18303 18303 100% 0.0 99% KX673530.1
18254 18254 99% 0.0 99% KU940224.1
18150 18150 100% 0.0 99% KU744693.1
18123 18123 100% 0.0 99% KU681081.3
17825 17825 100% 0.0 98% KU955593.1
17825 17825 99% 0.0 99% JN860885.1
17769 17769 98% 0.0 99% KF993678.1
17670 17670 100% 0.0 98% EU545988.1
17524 17524 100% 0.0 98% KU681082.3
16482 16482 100% 0.0 96% KX601167.1
16475 16475 99% 0.0 96% HQ234499.1
16469 16469 100% 0.0 96% KX377336.1
16253 16253 88% 0.0 99% KX447518.1

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LOCUS       KX447516               10654 bp    RNA     linear   VRL 14-AUG-2016
DEFINITION  Zika virus isolate 1_0111_PF polyprotein gene, complete cds.
ACCESSION   KX447516
VERSION     KX447516.1  GI:1041521224
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10654)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Zika virus outbreak in French Polynesia, 2013-2014
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10654)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2016) Umr190, Aix Marseille Universite, 27 Bd
            Jean Moulin, Marseille 13005, France
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 8.5.1
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10654
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="1_0111_PF"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="French Polynesia"
                     /collection_date="Jan-2014"
                     /note="Vero cells; one passage;
                     genotype: Asian"
     CDS             85..10356
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ANO46308.1"
                     /db_xref="GI:1041521225"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSKKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 actgcgacag ttcgagtttg aagcgaaagc tagcaacagt atcaacaggt tttattttgg
       61 atttggaaac gagagtttct ggtcatgaaa aacccaaaaa agaaatccgg aggattccgg
      121 attgtcaata tgctaaaacg cggagtagcc cgtgtgagcc cctttggggg cttgaagagg
      181 ctgccagccg gacttctgct gggtcatggg cccatcagga tggtcttggc gattctagcc
      241 tttttgagat tcacggcaat caagccatca ctgggtctca tcaatagatg gggttcagtg
      301 gggaaaaaag aggctatgga aataataaag aagttcaaga aagatctggc tgccatgctg
      361 agaataatca atgctaggaa ggagaagaag agacgaggcg cagatactag tgtcggaatt
      421 gttggcctcc tgctgaccac agctatggca gcggaggtca ctagacgtgg gagtgcatac
      481 tatatgtact tggacagaaa cgatgctggg gaggccatat cttttccaac cacattgggg
      541 atgaataagt gttatataca gatcatggat cttggacaca tgtgtgatgc caccatgagc
      601 tatgaatgcc ctatgctgga tgagggggtg gaaccagatg acgtcgattg ttggtgcaac
      661 acgacgtcaa cttgggttgt gtacggaacc tgccatcaca aaaaaggtga agcacggaga
      721 tctagaagag ctgtgacgct cccctcccat tccactagga agctgcaaac gcggtcgcaa
      781 acctggttgg aatcaagaga atacacaaag cacttgatta gagtcgaaaa ttggatattc
      841 aggaaccctg gcttcgcgtt agcagcagct gccatcgctt ggcttttggg aagttcaacg
      901 agcaaaaaag tcatatactt ggtcatgata ctgctgattg ccccggcata cagcatcagg
      961 tgcataggag tcagcaatag ggactttgtg gaaggtatgt caggtgggac ttgggttgat
     1021 gttgtcttgg aacatggagg ttgtgtcacc gtaatggcac aggacaaacc gactgtcgac
     1081 atagagctgg ttacaacaac agtcagcaac atggcggagg taagatccta ctgctatgag
     1141 gcatcaatat cggacatggc ttcggacagc cgctgcccaa cacaaggtga agcctacctt
     1201 gacaagcaat cagacactca atatgtctgc aaaagaacgt tagtggacag aggctgggga
     1261 aatggatgtg gactttttgg caaagggagc ctggtgacat gcgctaagtt tgcatgctcc
     1321 aagaaaatga ccgggaagag catccagcca gagaatctgg agtaccggat aatgctgtca
     1381 gttcatggct cccagcacag tgggatgatc gttaatgaca caggacatga aactgatgag
     1441 aatagagcga aggttgagat aacgcccaat tcaccaagag ccgaagccac cctggggggt
     1501 tttggaagcc taggacttga ttgtgaaccg aggacaggcc ttgacttttc agatttgtat
     1561 tacttgacta tgaataacaa gcactggttg gttcacaagg agtggttcca cgacattcca
     1621 ttaccttggc acgctggggc agacaccgga actccacact ggaacaacaa agaagcactg
     1681 gtagagttca aggacgcaca tgccaaaagg caaactgtcg tggttctagg gagtcaagaa
     1741 ggagcagttc acacggccct tgctggagct ctggaggctg agatggatgg tgcaaaggga
     1801 aggctgtcct ctggccactt gaaatgtcgc ctgaaaatgg ataaacttag attgaagggc
     1861 gtgtcatact ccttgtgtac cgcagcgttc acattcacca agatcccggc tgaaacactg
     1921 cacgggacag tcacagtgga ggtacagtac gcagggacag atggaccttg caaggttcca
     1981 gctcagatgg cggtggacat gcaaactctg accccagttg ggaggttgat aaccgctaac
     2041 cccgtaatca ctgaaagcac tgagaactct aagatgatgc tggaacttga tccaccattt
     2101 ggggactctt acattgtcat aggagtcggg gagaagaaga tcacccacca ctggcacagg
     2161 agtggcagca ccattggaaa agcatttgaa gccactgtga gaggtgccaa gagaatggca
     2221 gtcttgggag acacagcctg ggactttgga tcagttggag gcgctctcaa ctcattgggc
     2281 aagggcatcc atcaaatttt tggagcagct ttcaaatcat tgtttggagg aatgtcctgg
     2341 ttctcacaaa ttctcattgg gacgttgctg atgtggttgg gtctgaacac aaagaatgga
     2401 tctatttccc ttatgtgctt ggccttaggg ggagtgttga tcttcttatc cacagccgtc
     2461 tctgctgatg tggggtgctc ggtggacttc tcaaagaagg agacgagatg cggtacaggg
     2521 gtgttcgtct ataacgacgt tgaagcctgg agggacaggt acaagtacca tcctgactcc
     2581 ccccgtagat tggcagcagc agtcaagcaa gcctgggaag atggtatctg tgggatctcc
     2641 tctgtttcaa gaatggaaaa catcatgtgg agatcagtag aaggggagct caacgcaatc
     2701 ctggaagaga atggagttca actgacggtc gttgtgggat ctgtaaaaaa ccccatgtgg
     2761 agaggtccac agagattgcc cgtgcctgtg aacgagttgc cccacggctg gaaggcttgg
     2821 gggaaatcgt acttcgtcag agcagcaaag acaaataaca gctttgtcgt ggatggtgac
     2881 acactgaagg aatgcccact caaacataga gcatggaaca gctttcttgt ggaggatcat
     2941 gggttcgggg tatttcacac tagtgtctgg ctcaaggtta gagaagatta ttcattagag
     3001 tgtgatccag ccgttattgg aacagctgtt aagggaaagg aggctgtaca cagtgatcta
     3061 ggctactgga ttgagagtga gaagaatgac acatggaggc tgaagagggc ccatctgatc
     3121 gagatgaaaa catgtgaatg gccaaagtcc cacacattgt ggacagatgg aatagaagag
     3181 agtgatctga tcatacccaa gtctttagct gggccactca gccatcacaa taccagagag
     3241 ggctacagga cccaaatgaa agggccatgg cacagtgaag agcttgaaat tcggtttgag
     3301 gaatgcccag gcactaaggt ccacgtggag gaaacatgtg gaacaagagg accatctctg
     3361 agatcaacca ctgcaagcgg aagggtgatc gaggaatggt gctgcaggga gtgcacaatg
     3421 cccccactgt cgttccgggc taaagatggc tgttggtatg gaatggagat aaggcccagg
     3481 aaagaaccag aaagtaactt agtaaggtca atggtgactg caggatcaac tgatcacatg
     3541 gatcacttct cccttggagt gcttgtgatt ctgctcatgg tgcaggaagg gctgaagaag
     3601 agaatgacca caaagatcat cataagcaca tcaatggcag tgctggtagc tatgatcctg
     3661 ggaggatttt caatgagtga cctggctaag cttgcaattt tgatgggtgc caccttcgcg
     3721 gaaatgaaca ctggaggaga tgtagctcat ctggcgctga tagcggcatt caaagtcaga
     3781 ccagcgttgc tggtatcttt catcttcaga gctaattgga caccccgtga aagcatgctg
     3841 ctggccttgg cctcgtgtct tttgcaaact gcgatctccg ccttggaagg cgacctgatg
     3901 gttctcatca atggttttgc tttggcctgg ttggcaatac gagcgatggt tgttccacgc
     3961 actgataaca tcaccttggc aatcctggct gctctgacac cactggcccg gggcacactg
     4021 cttgtggcgt ggagagcagg ccttgctact tgcggggggt ttatgctcct ctctctgaag
     4081 ggaaaaggca gtgtgaagaa gaacttacca tttgtcatgg ccctgggact aaccgctgtg
     4141 aggctggtcg accccatcaa cgtggtggga ctgctgttgc tcacaaggag tgggaagcgg
     4201 agctggcccc ctagcgaagt actcacagct gttggcttga tatgcgcatt ggctggaggg
     4261 ttcgccaagg cagatataga gatggctggg cccatggccg cggtcggtct gctaattgtc
     4321 agttacgtgg tctcaggaaa gagtgtggac atgtacattg aaagagcagg tgacatcaca
     4381 tgggaaaaag atgcggaagt cactggaaac agtccccggc tcgatgtggc gctagatgag
     4441 agtggtgatt tctccctggt ggaggatgac ggtcccccca tgagagagat catactcaag
     4501 gtggtcctga tgaccatctg tggcatgaac ccaatagcca taccctttgc agctggagcg
     4561 tggtacgtat acgtgaagac tggaaaaagg agtggtgctc tatgggatgt gcctgctccc
     4621 aaggaagtaa aaaaggggga gaccacagat ggagtgtaca gagtaatgac tcgtagactg
     4681 ctaggttcaa cacaagttgg agtgggagtt atgcaagagg gggtctttca cactatgtgg
     4741 cacgtcacaa aaggatccgc gctgagaagc ggtgaaggga gacttgatcc atactgggga
     4801 gatgtcaagc aggatctggt gtcatactgt ggtccatgga agctagatgc cgcctgggac
     4861 gggcacagcg aggtgcagct cttggccgtg ccccccggag agagagcgag gaacatccag
     4921 actctgcccg gaatatttaa gacaaaggat ggggacattg gagcggttgc gctggattac
     4981 ccagcaggaa cttcaggatc tccaatccta gacaagtgtg ggagagtgat aggactttat
     5041 ggcaatgggg tcgtgatcaa aaatgggagt tatgttagtg ccatcaccca agggaggagg
     5101 gaggaagaga ctcctgttga gtgcttcgag ccttcgatgc tgaagaagaa gcagctaact
     5161 gtcttagact tgcatcctgg agctgggaaa accaggagag ttcttcctga aatagtccgt
     5221 gaagccataa aaacaagact ccgtactgtg atcttagctc caaccagggt tgtcgctgct
     5281 gaaatggagg aagcccttag agggcttcca gtgcgttata tgacaacagc agtcaatgtc
     5341 acccactctg gaacagaaat cgtcgactta atgtgccatg ccaccttcac ttcacgtcta
     5401 ctacagccaa tcagagtccc caactataat ctgtatatta tggatgaggc ccacttcaca
     5461 gatccctcaa gtatagcagc aagaggatac atttcaacaa gggttgagat gggcgaggcg
     5521 gctgccatct tcatgaccgc cacgccacca ggaacccgtg acgcatttcc ggactccaac
     5581 tcaccaatta tggacaccga agtggaagtc ccagagagag cctggagctc aggctttgat
     5641 tgggtgacgg atcattctgg aaaaacagtt tggtttgttc caagcgtgag gaacggcaat
     5701 gagatcgcag cttgtctgac aaaggctgga aaacgggtca tacagctcag cagaaagact
     5761 tttgagacag agttccagaa aacaaaacat caagagtggg actttgtcgt gacaactgac
     5821 atttcagaga tgggcgccaa ctttaaagct gaccgtgtca tagattccag gagatgccta
     5881 aagccggtca tacttgatgg cgagagagtc attctggctg gacccatgcc tgtcacacat
     5941 gccagcgctg cccagaggag ggggcgcata ggcaggaatc ccaacaaacc tggagatgag
     6001 tatctgtatg gaggtgggtg cgcagagact gacgaagacc atgcacactg gcttgaagca
     6061 agaatgctcc ttgacaatat ttacctccaa gatggcctca tagcctcgct ctatcgacct
     6121 gaggccgaca aagtagcagc cattgaggga gagttcaagc ttaggacgga gcaaaggaag
     6181 acctttgtgg aactcatgaa aagaggagat cttcctgttt ggctggccta tcaggttgca
     6241 tctgccggaa taacctacac agatagaaga tggtgctttg atggcacgac caacaacacc
     6301 ataatggaag acagtgtgcc ggcagaggtg tggaccagac acggagagaa aagagtgctc
     6361 aaaccgaggt ggatggacgc cagagtttgt tcagatcatg cggccctgaa gtcattcaag
     6421 gagtttgccg ctgggaaaag aggagcggct tttggagtga tggaagccct gggaacactg
     6481 ccaggacaca tgacagagag attccaggaa gccattgaca acctcgctgt gctcatgcgg
     6541 gcagagactg gaagcaggcc ttacaaagcc gcggcggccc aattgccgga gaccctagag
     6601 accattatgc ttttggggtt gctgggaaca gtctcgctgg gaatcttttt cgtcttgatg
     6661 aggaacaagg gcatagggaa gatgggcttt ggaatggtga ctcttggggc cagcgcatgg
     6721 ctcatgtggc tctcggaaat tgagccagcc agaattgcat gtgtcctcat tgttgtgttc
     6781 ctattgctgg tggtgctcat acctgagcca gaaaagcaaa gatctcccca ggacaaccaa
     6841 atggcaatca tcatcatggt agcagtaggt cttctgggct tgattaccgc caatgaactc
     6901 ggatggttgg agagaacaaa gagtgaccta agccatctaa tgggaaggag agaggagggg
     6961 gcaaccatag gattctcaat ggacattgac ctgcggccag cctcagcttg ggccatctat
     7021 gctgccttga caactttcat taccccagcc gtccaacatg cagtgaccac ttcatacaac
     7081 aactactcct taatggcgat ggccacgcaa gctggagtgt tgtttggtat gggcaaaggg
     7141 atgccattct acgcatggga ctttggagtc ccgctgctaa tgataggttg ctactcacaa
     7201 ttaacacccc tgaccctaat agtggccatc attttgctcg tggcgcacta catgtacttg
     7261 atcccagggc tgcaggcagc agctgcgcgt gctgcccaga agagaacggc agctggcatc
     7321 atgaagaacc ctgttgtgga tggaatagtg gtgactgaca ttgacacaat gacaattgac
     7381 ccccaagtgg agaaaaagat gggacaggtg ctactcatag cagtagccgt ctccagcgcc
     7441 atactgtcgc ggaccgcctg ggggtggggg gaggctgggg ccctgatcac agctgcaact
     7501 tccactttgt gggaaggctc tccgaacaag tactggaact cctctacagc cacttcactg
     7561 tgtaacattt ttaggggaag ttacttggct ggagcttctc taatctacac agtaacaaga
     7621 aacgctggct tggtcaagag acgtgggggt ggaacaggag agaccctggg agagaaatgg
     7681 aaggcccgct tgaaccagat gtcggccctg gagttctact cctacaaaaa gtcaggcatc
     7741 accgaggtgt gcagagaaga ggcccgccgc gccctcaagg acggtgtggc aacgggaggc
     7801 catgctgtgt cccgaggaag tgcaaagctg agatggttgg tggagcgggg atacctgcag
     7861 ccctatggaa aggtcattga tcttggatgt ggcagagggg gctggagtta ctacgccgcc
     7921 accatccgca aagttcaaga agtgaaagga tacacaaaag gaggccctgg tcatgaagaa
     7981 cccatgttgg tgcaaagcta tgggtggaac atagtccgtc ttaagagtgg ggtggacgtc
     8041 tttcatatgg cggctgagcc gtgtgacacg ttgctgtgtg acataggtga gtcatcatcc
     8101 agtcctgaag tggaagaagc acggacgctc agagtcctct ccatggtggg ggattggctt
     8161 gaaaaaagac caggagcctt ttgtataaaa gtgttgtgcc catacaccag cactatgatg
     8221 gaaaccctgg agcgactgca gcgtaggtat gggggaggac tggtcagagt gccactctcc
     8281 cgcaactcta cacatgagat gtactgggtc tctggagcga aaagcaacac cataaaaagt
     8341 gtgtccacca cgagccagct cctcttgggg cgcatggacg ggcccaggag gccagtgaaa
     8401 tatgaggagg atgtgaatct cggctctggc acgcgggctg tggtaagctg cgctgaagct
     8461 cccaacatga agatcattgg taaccgcatt gaaaggatcc gcagtgagca cgcggaaacg
     8521 tggttctttg acgagaacca cccatatagg acatgggctt accatggaag ctatgaggcc
     8581 cccacacaag ggtcagcgtc ctctctaata aacggggttg tcaggctcct gtcaaaaccc
     8641 tgggatgtgg tgactggagt cacaggaata gccatgaccg acaccacacc gtatggtcag
     8701 caaagagttt tcaaggaaaa agtggacact agggtgccag acccccaaga aggcactcgt
     8761 caggttatga gcatggtctc ttcctggttg tggaaagagc taggcaaaca caaacggcca
     8821 cgagtctgta ccaaagaaga gttcatcaac aaggttcgta gcaatgcagc actaggggca
     8881 atatttgaag aggaaaaaga gtggaagact gcagtggaag ctgtgaacga tccaaggttc
     8941 tgggctctag tggacaagga aagagagcac cacctgagag gagagtgcca gagttgtgtg
     9001 tacaacatga tgggaaaaag agaaaagaaa caaggggaat ttggaaaggc caagggcagc
     9061 cgcgccatct ggtatatgtg gctaggggct agatttctag agttcgaagc ccttggattc
     9121 ttgaacgagg atcactggat ggggagagag aactcaggag gtggtgttga agggctggga
     9181 ttacaaagac tcggatatgt cctagaagag atgagtcgca taccaggagg aaggatgtat
     9241 gcagatgaca ctgctggctg ggacacccgc atcagcaggt ttgatctgga gaatgaagct
     9301 ctaatcacca accaaatgga gaaagggcac agggccttgg cattggccat aatcaagtac
     9361 acataccaaa acaaagtggt aaaggtcctt agaccagctg aaaaagggaa gacagttatg
     9421 gacattattt cgagacaaga ccaaaggggg agcggacaag ttgtcactta cgctcttaac
     9481 acatttacca acctagtggt gcaactcatt cggaatatgg aggctgagga agttctagag
     9541 atgcaagact tgtggctgct gcggaggtca gagaaagtga ccaactggtt gcagagcaac
     9601 ggatgggata ggctcaaacg aatggcagtc agtggagatg attgcgttgt gaagccaatt
     9661 gatgataggt ttgcacatgc cctcaggttc ttgaatgata tgggaaaagt taggaaggac
     9721 acacaagagt ggaaaccctc aactggatgg gacaactggg aagaagttcc gttttgctcc
     9781 caccacttca acaagctcca tctcaaggac gggaggtcca ttgtggttcc ctgccgccac
     9841 caagatgaac tgattggccg ggcccgcgtc tctccagggg cgggatggag catccgggag
     9901 actgcttgcc tagcaaaatc atatgcgcaa atgtggcagc tcctttattt ccacagaagg
     9961 gacctccgac tgatggccaa tgccatttgt tcatctgtgc cagttgactg ggttccaact
    10021 gggagaacta cctggtcaat ccatggaaag ggagaatgga tgaccactga agacatgctt
    10081 gtggtgtgga acagagtgtg gattgaggag aacgaccaca tggaagacaa gaccccagtt
    10141 acgaaatgga cagacattcc ctatttggga aaaagggaag acttgtggtg tggatctctc
    10201 atagggcaca gaccgcgcac cacctgggct gagaacatta aaaacacagt caacatggtg
    10261 cgcaggatca taggtgatga agaaaagtac atggactacc tatccaccca agttcgctac
    10321 ttgggtgaag aagggtctac acctggagtg ctgtaagcac caatcttagt gttgtcaggc
    10381 ctgctagtca gccacagctt ggggaaagct gtgcagcctg tgaccccccc aggagaagct
    10441 gggaaaccaa gcctatagtc aggccgagaa cgccatggca cggaagaagc catgctgcct
    10501 gtgagcccct cagaggacac tgagtcaaaa aaccccacgc gcttggaggc gcaggatggg
    10561 aaaagaaggt ggcgaccttc cccacccttc aatctggggc ctgaactgga gatcagctgt
    10621 ggatctccag aagagggact agtggttaga ggag

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
18525 18525 100% 0.0 100% KX447516.1
18480 18480 100% 0.0 99% KX447509.1
18474 18474 100% 0.0 99% KX447512.1
18474 18474 100% 0.0 99% KX369547.1
18474 18474 100% 0.0 99% KJ776791.1
18471 18471 100% 0.0 99% KX447515.1
18465 18465 100% 0.0 99% KX447514.1
18465 18465 100% 0.0 99% KX447513.1
18462 18462 100% 0.0 99% KX447511.1
18456 18456 100% 0.0 99% KX447510.1
18429 18429 100% 0.0 99% KX447517.1
18429 18429 100% 0.0 99% KU509998.3
18411 18411 100% 0.0 99% KX280026.1
18411 18411 100% 0.0 99% KX051563.1
18408 18408 100% 0.0 99% KU991811.1
18408 18408 100% 0.0 99% KU321639.1
18399 18399 100% 0.0 99% KU729218.1
18399 18399 100% 0.0 99% KU707826.1
18399 18399 100% 0.0 99% KU365779.1
18393 18393 100% 0.0 99% KX262887.1
18393 18393 100% 0.0 99% KX197192.1
18390 18390 100% 0.0 99% KX117076.1
18390 18390 100% 0.0 99% KU940228.1
18384 18384 100% 0.0 99% KX198135.1
18384 18384 100% 0.0 99% KU926309.1
18384 18384 100% 0.0 99% KU365780.1
18381 18381 100% 0.0 99% KX185891.1
18381 18381 100% 0.0 99% KU963796.1
18381 18381 100% 0.0 99% KU647676.1
18381 18381 100% 0.0 99% KU365777.1
18375 18375 100% 0.0 99% KU758877.1
18375 18375 100% 0.0 99% KX253996.1
18375 18375 100% 0.0 99% KX247646.1
18375 18375 100% 0.0 99% KX156776.1
18375 18375 100% 0.0 99% KU955589.1
18375 18375 100% 0.0 99% KU820899.2
18375 18375 100% 0.0 99% KU501217.1
18372 18372 100% 0.0 99% KX266255.1
18372 18372 100% 0.0 99% KX520666.1
18372 18372 100% 0.0 99% KU866423.2
18372 18372 100% 0.0 99% KX156774.1
18372 18372 100% 0.0 99% KU729217.2
18372 18372 99% 0.0 99% KU497555.1
18372 18372 100% 0.0 99% KU527068.1
18372 18372 100% 0.0 99% KU501216.1
18366 18366 100% 0.0 99% KU820897.3
18366 18366 100% 0.0 99% KX247632.1
18366 18366 100% 0.0 99% KX156775.1
18366 18366 100% 0.0 99% KX087102.1
18366 18366 100% 0.0 99% KU365778.1
18366 18366 100% 0.0 99% KU312312.1
18363 18363 100% 0.0 99% KU922960.1
18357 18357 100% 0.0 99% KX548902.1
18357 18357 100% 0.0 99% KX446951.1
18357 18357 100% 0.0 99% KU937936.1
18357 18357 100% 0.0 99% KU926310.1
18357 18357 100% 0.0 99% KU922923.1
18357 18357 100% 0.0 99% KU501215.1
18354 18354 100% 0.0 99% KX601168.1
18354 18354 100% 0.0 99% KX446950.1
18354 18354 100% 0.0 99% KX087101.2
18354 18354 100% 0.0 99% KU870645.1
18348 18348 100% 0.0 99% KX377337.1
18348 18348 100% 0.0 99% KU853013.1
18348 18348 100% 0.0 99% KU853012.1
18339 18339 100% 0.0 99% KU820898.1
18336 18336 100% 0.0 99% KX056898.1
18336 18336 100% 0.0 99% KU955590.1
18330 18330 100% 0.0 99% KU740184.2
18330 18330 100% 0.0 99% KU761564.1
18327 18327 100% 0.0 99% KX673530.1
18294 18294 99% 0.0 99% KU940224.1
18191 18191 100% 0.0 99% KU744693.1
18137 18137 100% 0.0 99% KU681081.3
17831 17831 100% 0.0 99% KU955593.1
17829 17829 99% 0.0 99% JN860885.1
17766 17766 98% 0.0 99% KF993678.1
17685 17685 100% 0.0 98% EU545988.1
17528 17528 100% 0.0 98% KU681082.3
16496 16496 100% 0.0 96% KX601167.1
16487 16487 99% 0.0 96% HQ234499.1
16482 16482 100% 0.0 96% KX377336.1
16280 16280 88% 0.0 99% KX447518.1

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LOCUS       KX447510               10588 bp    RNA     linear   VRL 14-AUG-2016
DEFINITION  Zika virus isolate 1_0049_PF polyprotein gene, complete cds.
ACCESSION   KX447510
VERSION     KX447510.1  GI:1041521212
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10588)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Zika virus outbreak in French Polynesia, 2013-2014
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10588)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2016) Umr190, Aix Marseille Universite, 27 Bd
            Jean Moulin, Marseille 13005, France
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 8.5.1
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10588
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="1_0049_PF"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="French Polynesia"
                     /collection_date="Dec-2013"
                     /note="Vero cells; one passage;
                     genotype: Asian"
     CDS             48..10319
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ANO46302.1"
                     /db_xref="GI:1041521213"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 agtatcaaca ggttttattt tggatttgga aacgagagtt tctggtcatg aaaaacccta
       61 aaaagaaatc cggaggattc cggattgtca atatgctaaa acgcggagta gcccgtgtga
      121 gcccctttgg gggcttgaag aggctgccag ccggacttct gctgggtcat gggcccatca
      181 ggatggtctt ggcgattcta gcctttttga gattcacggc tatcaagcca tcactgggtc
      241 tcatcaatag atggggttca gtggggaaaa aagaggctat ggaaataata aagaagttca
      301 agaaagatct ggctgccatg ctgagaataa tcaatgctag gaaggagaag aagagacgag
      361 gcgcagatac tagtgtcgga attgttggcc tcctgctgac cacagctatg gcagcggagg
      421 tcactagacg tgggagtgca tactatatgt acttggacag aaacgatgct ggggaggcca
      481 tatcttttcc aaccacattg gggatgaata agtgttatat acagatcatg gatcttggac
      541 acatgtgtga tgccaccatg agctatgaat gccctatgct ggatgagggg gtggaaccag
      601 atgacgtcga ttgttggtgc aacacgacgt caacttgggt tgtgtacgga acctgccatc
      661 acaaaaaagg tgaagcacgg agatctagaa gagctgtgac gctcccctcc cattccacta
      721 ggaagctgca aacgcggtcg caaacctggt tggaatcaag agaatacaca aagcacttga
      781 ttagagtcga aaattggata ttcaggaacc ctggcttcgc gttagcagca gctgccatcg
      841 cttggctttt gggaagctca acgagccaaa aagtcatata cttggtcatg atactgctga
      901 ttgccccggc atacagcatc aggtgcatag gagtcagcaa tagggacttt gtggaaggta
      961 tgtcaggtgg gacttgggtt gatgttgtct tggaacatgg aggttgtgtc accgtaatgg
     1021 cacaggacaa accgactgtc gacatagagc tggttacaac aacagtcagc aacatggcgg
     1081 aggtaagatc ctactgctat gaggcatcaa tatcagacat ggcttcggac agccgctgcc
     1141 caacacaagg tgaagcctac cttgacaagc aatcagacac tcaatatgtc tgcaaaagaa
     1201 cgttagtgga cagaggctgg ggaaatggat gtggactttt tggcaaaggg agcctggtga
     1261 catgcgctaa gtttgcatgc tccaagaaaa tgaccgggaa gagcatccag ccagagaatc
     1321 tggagtaccg gataatgctg tcagttcatg gctcccagca cagtgggatg atcgttaatg
     1381 acacaggaca tgaaactgat gagaatagag cgaaggttga gataacgccc aattcaccaa
     1441 gagccgaagc caccctgggg ggttttggaa gcctaggact tgattgtgaa ccgaggacag
     1501 gccttgactt ttcagatttg tattacttga ctatgaataa caagcactgg ttggttcaca
     1561 aggagtggtt ccacgacatt ccattacctt ggcacgctgg ggcagacacc ggaactccac
     1621 actggaacaa caaagaagca ctggtagagt tcaaggacgc acatgccaaa aggcaaactg
     1681 tcgtggttct agggagtcaa gaaggagcag ttcacacggc ccttgctgga gctctggagg
     1741 ctgagatgga tggtgcaaag ggaaggctgt cctctggcca cttgaaatgt cgcctgaaaa
     1801 tggataaact tagattgaag ggcgtgtcat actccttgtg taccgcagcg ttcacattca
     1861 ccaagatccc ggctgaaaca ctgcacggga cagtcacagt ggaggtacag tacgcaggga
     1921 cagatggacc ttgcaaggtt ccagctcaga tggcggtgga catgcaaact ctgaccccag
     1981 ttgggaggtt gataaccgct aaccccgtaa tcactgaaag cactgagaac tctaagatga
     2041 tgctggaact tgatccacca tttggggact cttacattgt cataggagtc ggggagaaga
     2101 agatcaccca ccactggcac aggagtggca gcaccattgg aaaagcattt gaagccactg
     2161 tgagaggtgc caagagaatg gcagtcttgg gagacacagc ctgggacttt ggatcagttg
     2221 gaggcgctct caactcattg ggcaagggca tccatcaaat ttttggagca gctttcaaat
     2281 cattgtttgg aggaatgtcc tggttctcac aaattctcat tggaacgttg ctgatgtggt
     2341 tgggtctgaa cacaaagaat ggatctattt cccttatgtg cttggcctta gggggagtgt
     2401 tgatcttctt atccacagcc gtctctgctg atgtggggtg ctcggtggac ttctcaaaga
     2461 aggagacgag atgcggtaca ggggtgttcg tctataacga cgttgaagcc tggagggaca
     2521 ggtacaagta ccatcctgac tccccccgta gattggcagc agcagtcaag caagcctggg
     2581 aagatggtat ctgcgggatc tcctctgttt caagaatgga aaacatcatg tggagatcag
     2641 tagaagggga gctcaacgca atcctggaag agaatggagt tcaactgacg gtcgttgtgg
     2701 gatctgtaaa aaaccccatg tggagaggtc cacagagatt gcccgtgcct gtgaacgagc
     2761 tgccccacgg ctggaaggct tgggggaaat cgtacttcgt cagagcagca aagacaaata
     2821 acagctttgt cgtggatggt gacacactga aggaatgccc actcaaacat agagcatgga
     2881 acagctttct tgtggaggat catgggttcg gggtatttca cactagtgtc tggctcaagg
     2941 ttagagaaga ttattcatta gagtgtgatc cagccgttat tggaacagct gttaagggaa
     3001 aggaggctgt acacagtgat ctaggctact ggattgagag tgagaagaat gacacatgga
     3061 ggctgaagag ggcccatctg atcgagatga aaacatgtga atggccaaag tcccacacat
     3121 tgtggacaga tggaatagaa gagagtgatc tgatcatacc caagtcttta gctgggccac
     3181 tcagccatca caataccaga gagggctaca ggacccaaat gaaagggcca tggcacagtg
     3241 aagagcttga aattcggttt gaggaatgcc caggcactaa ggtccacgtg gaggaaacat
     3301 gtggaacaag aggaccatct ctgagatcaa ccactgcaag cggaagggtg atcgaggaat
     3361 ggtgctgcag ggagtgcaca atgcccccac tgtcgttccg ggctaaagat ggctgttggt
     3421 atggaatgga gataaggccc aggaaagaac cagaaagcaa cttagtaagg tcaatggtga
     3481 ctgcaggatc aactgatcac atggatcact tctcccttgg agtgcttgtg attctgctca
     3541 tggtgcagga agggctgaag aagagaatga ccacaaagat catcataagc acatcaatgg
     3601 cagtgctggt agctatgatc ctgggaggat tttcaatgag tgacctggct aagcttgcaa
     3661 ttttgatggg tgccaccttc gcggaaatga acactggagg agatgtagct catctggcgc
     3721 tgatagcggc attcaaagtc agaccagcgt tgctggtatc tttcatcttc agagctaatt
     3781 ggacaccccg tgaaagcatg ctgctggcct tggcctcgtg tcttttgcaa actgcgatct
     3841 ccgccttgga aggcgacctg atggttctca tcaatggttt tgctttggcc tggttggcaa
     3901 tacgagcgat ggttgttcca cgcactgata acatcacctt ggcaatcctg gctgctctga
     3961 caccactggc ccggggcaca ctgcttgtgg cgtggagagc aggccttgct acttgtgggg
     4021 ggtttatgct cctctctctg aagggaaaag gcagtgtgaa gaagaactta ccatttgtca
     4081 tggccctggg actaaccgct gtgaggctgg tcgaccccat caacgtggtg ggactgctgt
     4141 tgctcacaag gagtgggaag cggagctggc cccctagcga agtactcaca gctgttggcc
     4201 tgatatgcgc attggctgga gggttcgcca aggcagatat agagatggct gggcccatgg
     4261 ccgcggtcgg tctgctaatt gtcagttacg tggtctcagg aaagagtgtg gacatgtaca
     4321 ttgaaagagc aggtgacatc acatgggaaa aagatgcgga agtcactgga aacagtcccc
     4381 ggctcgatgt ggcgctagat gagagtggtg atttctccct ggtggaggat gacggtcccc
     4441 ccatgagaga gatcatactc aaggtggtcc tgatgaccat ctgtggcatg aacccaatag
     4501 ccataccctt tgcagctgga gcgtggtacg tatacgtgaa gactggaaaa aggagtggtg
     4561 ctctatggga tgtgcctgct cccaaggaag taaaaaaggg ggagaccaca gatggagtgt
     4621 acagagtaat gactcgtaga ctgctaggtt caacacaagt tggagtggga gttatgcaag
     4681 agggggtctt tcacactatg tggcacgtca caaaaggatc cgcgctgaga agcggtgaag
     4741 ggagacttga tccatactgg ggagatgtca agcaggatct ggtgtcatac tgtggtccat
     4801 ggaagctaga tgccgcctgg gacgggcaca gcgaggtgca gctcttggcc gtgccccccg
     4861 gagagagagc gaggaacatc cagactctgc ccggaatatt taagacaaag gatggggaca
     4921 ttggagcggt tgcgctggat tacccagcag gaacttcagg atctccaatc ctagacaagt
     4981 gtgggagagt gataggactt tatggcaatg gggtcgtgat caaaaatggg agttatgtta
     5041 gtgccatcac ccaagggagg agggaggaag agactcctgt tgagtgcttc gagccttcga
     5101 tgctgaagaa gaagcagcta actgtcttag acttgcatcc tggagctggg aaaaccagga
     5161 gagttcttcc tgaaatagtc cgtgaagcca taaaaacaag actccgtact gtgatcttag
     5221 ctccaaccag ggttgtcgct gctgaaatgg aggaagccct tagagggctt ccagtgcgtt
     5281 atatgacaac agcagtcaat gtcacccact ctggaacaga aatcgtcgac ttaatgtgcc
     5341 atgccacctt cacttcacgt ctactacagc caatcagagt ccccaactat aatctgtata
     5401 ttatggatga ggcccacttc acagatccct caagtatagc agcaagagga tacatttcaa
     5461 caagggttga gatgggcgag gcggctgcca tcttcatgac cgccacgcca ccaggaaccc
     5521 gtgacgcatt tccggactcc aactcaccaa ttatggacac cgaagtggaa gtcccagaga
     5581 gagcctggag ctcaggcttt gattgggtga cggatcattc tggaaaaaca gtttggtttg
     5641 ttccaagcgt gaggaacggc aatgagatcg cagcttgtct gacaaaggct ggaaaacggg
     5701 tcatacagct cagcagaaag acttttgaga cagagttcca gaaaacaaaa catcaagagt
     5761 gggactttgt cgtgacaact gacatttcag agatgggcgc caactttaaa gctgaccgtg
     5821 tcatagattc caggagatgc ctaaagccgg tcatacttga tggcgagaga gtcattctgg
     5881 ctggacccat gcctgtcaca catgccagcg ctgcccagag gagggggcgc ataggcagga
     5941 atcccaacaa acctggagat gagtatctgt atggaggtgg gtgcgcagag actgacgaag
     6001 accatgcaca ctggcttgaa gcaagaatgc tccttgacaa tatttacctc caagatggcc
     6061 tcatagcttc gctctatcga cctgaggccg acaaagtagc agccattgag ggagagttca
     6121 agcttaggac ggagcaaagg aagacctttg tggaactcat gaaaagagga gatcttcctg
     6181 tttggctggc ctatcaggtt gcatctgccg gaataaccta cacagataga agatggtgct
     6241 ttgatggcac gaccaacaac accataatgg aagacagtgt gccggcagag gtgtggacca
     6301 gacacggaga gaaaagagtg ctcaaaccga ggtggatgga cgccagagtt tgttcagatc
     6361 atgcggccct gaagtcattc aaggagtttg ccgctgggaa aagaggagcg gcttttggag
     6421 tgatggaagc cctgggaaca ctgccaggac acatgacaga gagattccag gaagccattg
     6481 acaacctcgc tgtgctcatg cgggcagaga ctggaagcag gccttacaaa gccgcggcgg
     6541 cccaattgcc ggagacccta gagaccatta tgcttttggg gttgctggga acagtctcgc
     6601 tgggaatctt tttcgtcttg atgaggaaca agggcatagg gaagatgggc tttggaatgg
     6661 tgactcttgg ggccagcgca tggctcatgt ggctctcgga aattgagcca gccagaattg
     6721 catgtgtcct cattgttgtg ttcctattgc tggtggtgct catacctgag ccagaaaagc
     6781 aaagatctcc ccaggacaac caaatggcaa tcatcatcat ggtagcagta ggtcttctgg
     6841 gcttgattac cgccaatgaa ctcggatggt tggagagaac aaagagtgac ctaagccatc
     6901 taatgggaag gagagaggag ggggcaacca taggattctc aatggacatt gacctgcggc
     6961 cagcctcagc ttgggccatc tatgctgcct tgacaacttt cattacccca gccgtccaac
     7021 atgcagtgac cacttcatac aacaactact ccttaatggc gatggccacg caagctggag
     7081 tgttgtttgg tatgggcaaa gggatgccat tctacgcatg ggactttgga gtcccgctgc
     7141 taatgatagg ttgctactca caattaacac ccctgaccct aatagtggcc atcattttgc
     7201 tcgtggcgca ctacatgtac ttgatcccag ggctgcaggc agcagctgcg cgtgctgccc
     7261 agaagagaac ggcagctggc atcatgaaga accctgttgt ggatggaata gtggtgactg
     7321 acattgacac aatgacaatt gacccccaag tggagaaaaa gatgggacag gtgctactca
     7381 tagcagtagc cgtctccagc gccatactgt cgcggaccgc ctgggggtgg ggggaggctg
     7441 gggccctgat cacagctgca acttccactt tgtgggaagg ctctccgaac aagtactgga
     7501 actcctctac agccacttca ctgtgtaaca tttttagggg aagttacttg gctggagctt
     7561 ctctaatcta cacagtaaca agaaacgctg gcttggtcaa gagacgtggg ggtggaacag
     7621 gagagaccct gggagagaaa tggaaggccc gcttgaacca gatgtcggcc ctggagttct
     7681 actcctacaa aaagtcaggc atcaccgagg tgtgcagaga agaggcccgc cgcgccctca
     7741 aggacggtgt ggcaacggga ggccatgctg tgtcccgagg aagtgcaaag ctgagatggt
     7801 tggtggagcg gggatacctg cagccctatg gaaaggtcat tgatcttgga tgtggcagag
     7861 ggggctggag ttactacgcc gccaccatcc gcaaagttca agaagtgaaa ggatacacaa
     7921 aaggaggccc tggtcatgaa gaacccatgt tggtgcaaag ctatgggtgg aacatagtcc
     7981 gtcttaagag tggggtggac gtctttcata tggcggctga gccgtgtgac acgttgctgt
     8041 gtgacatagg tgagtcatca tctagtcctg aagtggaaga agcacggacg ctcagagtcc
     8101 tctccatggt gggggattgg cttgaaaaaa gaccaggagc cttttgtata aaagtgttgt
     8161 gcccatacac cagcactatg atggaaaccc tggagcgact gcagcgtagg tatgggggag
     8221 gactggtcag agtgccactc tcccgcaact ctacacatga gatgtactgg gtctctggag
     8281 cgaaaagcaa caccataaaa agtgtgtcca ccacgagcca gctcctcttg gggcgcatgg
     8341 acgggcctag gaggccagtg aaatatgagg aggatgtgaa tctcggctct ggcacgcggg
     8401 ctgtggtaag ctgcgctgaa gctcccaaca tgaagatcat tggtaaccgc attgaaagga
     8461 tccgcagtga gcacgcggaa acgtggttct ttgacgagaa ccacccatat aggacatggg
     8521 cttaccatgg aagctatgag gcccccacac aagggtcagc gtcctctcta ataaacgggg
     8581 ttgtcaggct cctgtcaaaa ccctgggatg tggtgactgg agtcacagga atagccatga
     8641 ccgacaccac accgtatggt cagcaaagag ttttcaagga aaaagtggac actagggtgc
     8701 cagaccccca agaaggcact cgtcaggtta tgagcatggt ctcttcctgg ttgtggaaag
     8761 agctaggcaa acacaaacgg ccacgagtct gtaccaaaga agagttcatc aacaaggttc
     8821 gtagcaatgc agcattaggg gcaatatttg aagaggaaaa agagtggaag actgcagtgg
     8881 aagctgtgaa cgatccaagg ttctgggctc tagtggacaa ggaaagagag caccacctga
     8941 gaggagagtg ccagagttgt gtgtacaaca tgatgggaaa aagagaaaag aaacaagggg
     9001 aatttggaaa ggccaagggc agccgcgcca tctggtatat gtggctaggg gctagatttc
     9061 tagagttcga agcccttgga ttcttgaacg aggatcactg gatggggaga gagaactcag
     9121 gaggtggtgt tgaagggctg ggattacaaa gactcggata tgtcctagaa gagatgagtc
     9181 gcataccagg aggaaggatg tatgcagatg acactgctgg ctgggacacc cgcatcagca
     9241 ggtttgatct ggagaatgaa gctctaatca ccaaccaaat ggagaaaggg cacagggcct
     9301 tggcattggc cataatcaag tacacatacc aaaacaaagt ggtaaaggtc cttagaccag
     9361 ctgaaaaagg gaagacagtt atggacatta tttcgagaca agaccaaagg gggagcggac
     9421 aagttgtcac ttacgctctt aacacattta ccaacctagt ggtgcaactc attcggaata
     9481 tggaggctga ggaagttcta gagatgcaag acttgtggct gctgcggagg tcagagaaag
     9541 tgaccaactg gttgcagagc aacggatggg ataggctcaa acgaatggca gtcagtggag
     9601 atgattgcgt tgtgaagcca attgatgata ggtttgcaca tgccctcagg ttcttgaatg
     9661 atatgggaaa agttaggaag gacacacaag agtggaaacc ctcaactgga tgggacaact
     9721 gggaagaagt tccgttttgc tcccaccact tcaacaagct ccatctcaag gacgggaggt
     9781 ccattgtggt tccctgccgc caccaagatg aactgattgg ccgggcccgc gtctctccag
     9841 gggcgggatg gagcatccgg gagactgctt gcctagcaaa atcatatgcg caaatgtggc
     9901 agctccttta tttccacaga agggacctcc gactgatggc caatgccatt tgttcatctg
     9961 tgccagttga ctgggttcca actgggagaa ctacctggtc aatccatgga aagggagaat
    10021 ggatgaccac tgaagacatg cttgtggtgt ggaacagagt gtggattgag gagaacgacc
    10081 acatggaaga caagacccca gttacgaaat ggacagacat tccctatttg ggaaaaaggg
    10141 aagacttgtg gtgtggatct ctcatagggc acagaccgcg caccacctgg gctgagaaca
    10201 ttaaaaacac agtcaacatg gtgcgcagga tcataggtga tgaagaaaag tacatggact
    10261 acctatccac ccaagttcgc tacttgggtg aagaagggtc tacacctgga gtgctgtaag
    10321 caccaatctt agtgttgtca ggcctgctag tcagccacag cttggggaaa gctgtgcagc
    10381 ctgtgacccc cccaggagaa gctgggaaac caagcctata gtcaggccga gaacgccatg
    10441 gcacggaaga agccatgctg cctgtgagcc cctcagagga cactgagtca aaaaacccca
    10501 cgcgcttgga ggcgcaggat gggaaaagaa ggtggcgacc ttccccaccc ttcaatctgg
    10561 ggcctgaact ggagatcagc tgtggatc

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
18525 18525 100% 0.0 100% KX447510.1
18480 18480 100% 0.0 99% KX447512.1
18480 18480 100% 0.0 99% KX369547.1
18474 18474 100% 0.0 99% KX447509.1
18471 18471 100% 0.0 99% KX447513.1
18471 18471 100% 0.0 99% KJ776791.1
18465 18465 100% 0.0 99% KX447515.1
18465 18465 100% 0.0 99% KX447511.1
18462 18462 100% 0.0 99% KX447514.1
18462 18462 100% 0.0 99% KU509998.3
18456 18456 100% 0.0 99% KX447516.1
18444 18444 100% 0.0 99% KX051563.1
18438 18438 100% 0.0 99% KX280026.1
18438 18438 100% 0.0 99% KU991811.1
18438 18438 100% 0.0 99% KU321639.1
18429 18429 100% 0.0 99% KU729218.1
18429 18429 100% 0.0 99% KU707826.1
18429 18429 100% 0.0 99% KU365779.1
18426 18426 100% 0.0 99% KX447517.1
18426 18426 100% 0.0 99% KX262887.1
18426 18426 100% 0.0 99% KX197192.1
18417 18417 100% 0.0 99% KX198135.1
18417 18417 100% 0.0 99% KU926309.1
18417 18417 100% 0.0 99% KU365780.1
18411 18411 100% 0.0 99% KU940228.1
18411 18411 100% 0.0 99% KU647676.1
18411 18411 100% 0.0 99% KU365777.1
18408 18408 100% 0.0 99% KU758877.1
18408 18408 100% 0.0 99% KX247646.1
18408 18408 100% 0.0 99% KX156776.1
18408 18408 100% 0.0 99% KU501217.1
18404 18404 99% 0.0 99% KU497555.1
18402 18402 100% 0.0 99% KX156774.1
18402 18402 100% 0.0 99% KU729217.2
18402 18402 100% 0.0 99% KU527068.1
18402 18402 100% 0.0 99% KU501216.1
18399 18399 100% 0.0 99% KU820897.3
18399 18399 100% 0.0 99% KX247632.1
18399 18399 100% 0.0 99% KX156775.1
18399 18399 100% 0.0 99% KX087102.1
18399 18399 100% 0.0 99% KU365778.1
18399 18399 100% 0.0 99% KU312312.1
18393 18393 100% 0.0 99% KX520666.1
18393 18393 100% 0.0 99% KU922960.1
18390 18390 100% 0.0 99% KX548902.1
18390 18390 100% 0.0 99% KX446951.1
18390 18390 100% 0.0 99% KU937936.1
18390 18390 100% 0.0 99% KU926310.1
18390 18390 100% 0.0 99% KU922923.1
18390 18390 100% 0.0 99% KU501215.1
18384 18384 100% 0.0 99% KX601168.1
18384 18384 100% 0.0 99% KX446950.1
18384 18384 100% 0.0 99% KX087101.2
18384 18384 100% 0.0 99% KX117076.1
18384 18384 100% 0.0 99% KU870645.1
18381 18381 100% 0.0 99% KX377337.1
18381 18381 100% 0.0 99% KU853013.1
18379 18379 100% 0.0 99% KU853012.1
18375 18375 100% 0.0 99% KX185891.1
18375 18375 100% 0.0 99% KU963796.1
18372 18372 100% 0.0 99% KX253996.1
18372 18372 100% 0.0 99% KU955589.1
18372 18372 100% 0.0 99% KU820898.1
18372 18372 100% 0.0 99% KU820899.2
18368 18368 100% 0.0 99% KX266255.1
18366 18366 100% 0.0 99% KU866423.2
18366 18366 100% 0.0 99% KX056898.1
18366 18366 100% 0.0 99% KU955590.1
18363 18363 100% 0.0 99% KU740184.2
18363 18363 100% 0.0 99% KU761564.1
18357 18357 100% 0.0 99% KX673530.1
18321 18321 99% 0.0 99% KU940224.1
18213 18213 100% 0.0 99% KU744693.1
18132 18132 100% 0.0 99% KU681081.3
17825 17825 100% 0.0 98% KU955593.1
17825 17825 99% 0.0 99% JN860885.1
17793 17793 98% 0.0 99% KF993678.1
17676 17676 100% 0.0 98% EU545988.1
17524 17524 100% 0.0 98% KU681082.3
16491 16491 100% 0.0 96% KX601167.1
16484 16484 99% 0.0 96% HQ234499.1
16478 16478 100% 0.0 96% KX377336.1
16310 16310 88% 0.0 99% KX447518.1

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LOCUS       KX447510               10588 bp    RNA     linear   VRL 14-AUG-2016
DEFINITION  Zika virus isolate 1_0049_PF polyprotein gene, complete cds.
ACCESSION   KX447510
VERSION     KX447510.1  GI:1041521212
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10588)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Zika virus outbreak in French Polynesia, 2013-2014
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10588)
  AUTHORS   Nougairede,A., Bouazza,N., Piorkowski,G., Baronti,C., Musso,D. and
            De Lamballerie,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2016) Umr190, Aix Marseille Universite, 27 Bd
            Jean Moulin, Marseille 13005, France
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 8.5.1
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10588
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="1_0049_PF"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="French Polynesia"
                     /collection_date="Dec-2013"
                     /note="Vero cells; one passage;
                     genotype: Asian"
     CDS             48..10319
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="ANO46302.1"
                     /db_xref="GI:1041521213"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 agtatcaaca ggttttattt tggatttgga aacgagagtt tctggtcatg aaaaacccta
       61 aaaagaaatc cggaggattc cggattgtca atatgctaaa acgcggagta gcccgtgtga
      121 gcccctttgg gggcttgaag aggctgccag ccggacttct gctgggtcat gggcccatca
      181 ggatggtctt ggcgattcta gcctttttga gattcacggc tatcaagcca tcactgggtc
      241 tcatcaatag atggggttca gtggggaaaa aagaggctat ggaaataata aagaagttca
      301 agaaagatct ggctgccatg ctgagaataa tcaatgctag gaaggagaag aagagacgag
      361 gcgcagatac tagtgtcgga attgttggcc tcctgctgac cacagctatg gcagcggagg
      421 tcactagacg tgggagtgca tactatatgt acttggacag aaacgatgct ggggaggcca
      481 tatcttttcc aaccacattg gggatgaata agtgttatat acagatcatg gatcttggac
      541 acatgtgtga tgccaccatg agctatgaat gccctatgct ggatgagggg gtggaaccag
      601 atgacgtcga ttgttggtgc aacacgacgt caacttgggt tgtgtacgga acctgccatc
      661 acaaaaaagg tgaagcacgg agatctagaa gagctgtgac gctcccctcc cattccacta
      721 ggaagctgca aacgcggtcg caaacctggt tggaatcaag agaatacaca aagcacttga
      781 ttagagtcga aaattggata ttcaggaacc ctggcttcgc gttagcagca gctgccatcg
      841 cttggctttt gggaagctca acgagccaaa aagtcatata cttggtcatg atactgctga
      901 ttgccccggc atacagcatc aggtgcatag gagtcagcaa tagggacttt gtggaaggta
      961 tgtcaggtgg gacttgggtt gatgttgtct tggaacatgg aggttgtgtc accgtaatgg
     1021 cacaggacaa accgactgtc gacatagagc tggttacaac aacagtcagc aacatggcgg
     1081 aggtaagatc ctactgctat gaggcatcaa tatcagacat ggcttcggac agccgctgcc
     1141 caacacaagg tgaagcctac cttgacaagc aatcagacac tcaatatgtc tgcaaaagaa
     1201 cgttagtgga cagaggctgg ggaaatggat gtggactttt tggcaaaggg agcctggtga
     1261 catgcgctaa gtttgcatgc tccaagaaaa tgaccgggaa gagcatccag ccagagaatc
     1321 tggagtaccg gataatgctg tcagttcatg gctcccagca cagtgggatg atcgttaatg
     1381 acacaggaca tgaaactgat gagaatagag cgaaggttga gataacgccc aattcaccaa
     1441 gagccgaagc caccctgggg ggttttggaa gcctaggact tgattgtgaa ccgaggacag
     1501 gccttgactt ttcagatttg tattacttga ctatgaataa caagcactgg ttggttcaca
     1561 aggagtggtt ccacgacatt ccattacctt ggcacgctgg ggcagacacc ggaactccac
     1621 actggaacaa caaagaagca ctggtagagt tcaaggacgc acatgccaaa aggcaaactg
     1681 tcgtggttct agggagtcaa gaaggagcag ttcacacggc ccttgctgga gctctggagg
     1741 ctgagatgga tggtgcaaag ggaaggctgt cctctggcca cttgaaatgt cgcctgaaaa
     1801 tggataaact tagattgaag ggcgtgtcat actccttgtg taccgcagcg ttcacattca
     1861 ccaagatccc ggctgaaaca ctgcacggga cagtcacagt ggaggtacag tacgcaggga
     1921 cagatggacc ttgcaaggtt ccagctcaga tggcggtgga catgcaaact ctgaccccag
     1981 ttgggaggtt gataaccgct aaccccgtaa tcactgaaag cactgagaac tctaagatga
     2041 tgctggaact tgatccacca tttggggact cttacattgt cataggagtc ggggagaaga
     2101 agatcaccca ccactggcac aggagtggca gcaccattgg aaaagcattt gaagccactg
     2161 tgagaggtgc caagagaatg gcagtcttgg gagacacagc ctgggacttt ggatcagttg
     2221 gaggcgctct caactcattg ggcaagggca tccatcaaat ttttggagca gctttcaaat
     2281 cattgtttgg aggaatgtcc tggttctcac aaattctcat tggaacgttg ctgatgtggt
     2341 tgggtctgaa cacaaagaat ggatctattt cccttatgtg cttggcctta gggggagtgt
     2401 tgatcttctt atccacagcc gtctctgctg atgtggggtg ctcggtggac ttctcaaaga
     2461 aggagacgag atgcggtaca ggggtgttcg tctataacga cgttgaagcc tggagggaca
     2521 ggtacaagta ccatcctgac tccccccgta gattggcagc agcagtcaag caagcctggg
     2581 aagatggtat ctgcgggatc tcctctgttt caagaatgga aaacatcatg tggagatcag
     2641 tagaagggga gctcaacgca atcctggaag agaatggagt tcaactgacg gtcgttgtgg
     2701 gatctgtaaa aaaccccatg tggagaggtc cacagagatt gcccgtgcct gtgaacgagc
     2761 tgccccacgg ctggaaggct tgggggaaat cgtacttcgt cagagcagca aagacaaata
     2821 acagctttgt cgtggatggt gacacactga aggaatgccc actcaaacat agagcatgga
     2881 acagctttct tgtggaggat catgggttcg gggtatttca cactagtgtc tggctcaagg
     2941 ttagagaaga ttattcatta gagtgtgatc cagccgttat tggaacagct gttaagggaa
     3001 aggaggctgt acacagtgat ctaggctact ggattgagag tgagaagaat gacacatgga
     3061 ggctgaagag ggcccatctg atcgagatga aaacatgtga atggccaaag tcccacacat
     3121 tgtggacaga tggaatagaa gagagtgatc tgatcatacc caagtcttta gctgggccac
     3181 tcagccatca caataccaga gagggctaca ggacccaaat gaaagggcca tggcacagtg
     3241 aagagcttga aattcggttt gaggaatgcc caggcactaa ggtccacgtg gaggaaacat
     3301 gtggaacaag aggaccatct ctgagatcaa ccactgcaag cggaagggtg atcgaggaat
     3361 ggtgctgcag ggagtgcaca atgcccccac tgtcgttccg ggctaaagat ggctgttggt
     3421 atggaatgga gataaggccc aggaaagaac cagaaagcaa cttagtaagg tcaatggtga
     3481 ctgcaggatc aactgatcac atggatcact tctcccttgg agtgcttgtg attctgctca
     3541 tggtgcagga agggctgaag aagagaatga ccacaaagat catcataagc acatcaatgg
     3601 cagtgctggt agctatgatc ctgggaggat tttcaatgag tgacctggct aagcttgcaa
     3661 ttttgatggg tgccaccttc gcggaaatga acactggagg agatgtagct catctggcgc
     3721 tgatagcggc attcaaagtc agaccagcgt tgctggtatc tttcatcttc agagctaatt
     3781 ggacaccccg tgaaagcatg ctgctggcct tggcctcgtg tcttttgcaa actgcgatct
     3841 ccgccttgga aggcgacctg atggttctca tcaatggttt tgctttggcc tggttggcaa
     3901 tacgagcgat ggttgttcca cgcactgata acatcacctt ggcaatcctg gctgctctga
     3961 caccactggc ccggggcaca ctgcttgtgg cgtggagagc aggccttgct acttgtgggg
     4021 ggtttatgct cctctctctg aagggaaaag gcagtgtgaa gaagaactta ccatttgtca
     4081 tggccctggg actaaccgct gtgaggctgg tcgaccccat caacgtggtg ggactgctgt
     4141 tgctcacaag gagtgggaag cggagctggc cccctagcga agtactcaca gctgttggcc
     4201 tgatatgcgc attggctgga gggttcgcca aggcagatat agagatggct gggcccatgg
     4261 ccgcggtcgg tctgctaatt gtcagttacg tggtctcagg aaagagtgtg gacatgtaca
     4321 ttgaaagagc aggtgacatc acatgggaaa aagatgcgga agtcactgga aacagtcccc
     4381 ggctcgatgt ggcgctagat gagagtggtg atttctccct ggtggaggat gacggtcccc
     4441 ccatgagaga gatcatactc aaggtggtcc tgatgaccat ctgtggcatg aacccaatag
     4501 ccataccctt tgcagctgga gcgtggtacg tatacgtgaa gactggaaaa aggagtggtg
     4561 ctctatggga tgtgcctgct cccaaggaag taaaaaaggg ggagaccaca gatggagtgt
     4621 acagagtaat gactcgtaga ctgctaggtt caacacaagt tggagtggga gttatgcaag
     4681 agggggtctt tcacactatg tggcacgtca caaaaggatc cgcgctgaga agcggtgaag
     4741 ggagacttga tccatactgg ggagatgtca agcaggatct ggtgtcatac tgtggtccat
     4801 ggaagctaga tgccgcctgg gacgggcaca gcgaggtgca gctcttggcc gtgccccccg
     4861 gagagagagc gaggaacatc cagactctgc ccggaatatt taagacaaag gatggggaca
     4921 ttggagcggt tgcgctggat tacccagcag gaacttcagg atctccaatc ctagacaagt
     4981 gtgggagagt gataggactt tatggcaatg gggtcgtgat caaaaatggg agttatgtta
     5041 gtgccatcac ccaagggagg agggaggaag agactcctgt tgagtgcttc gagccttcga
     5101 tgctgaagaa gaagcagcta actgtcttag acttgcatcc tggagctggg aaaaccagga
     5161 gagttcttcc tgaaatagtc cgtgaagcca taaaaacaag actccgtact gtgatcttag
     5221 ctccaaccag ggttgtcgct gctgaaatgg aggaagccct tagagggctt ccagtgcgtt
     5281 atatgacaac agcagtcaat gtcacccact ctggaacaga aatcgtcgac ttaatgtgcc
     5341 atgccacctt cacttcacgt ctactacagc caatcagagt ccccaactat aatctgtata
     5401 ttatggatga ggcccacttc acagatccct caagtatagc agcaagagga tacatttcaa
     5461 caagggttga gatgggcgag gcggctgcca tcttcatgac cgccacgcca ccaggaaccc
     5521 gtgacgcatt tccggactcc aactcaccaa ttatggacac cgaagtggaa gtcccagaga
     5581 gagcctggag ctcaggcttt gattgggtga cggatcattc tggaaaaaca gtttggtttg
     5641 ttccaagcgt gaggaacggc aatgagatcg cagcttgtct gacaaaggct ggaaaacggg
     5701 tcatacagct cagcagaaag acttttgaga cagagttcca gaaaacaaaa catcaagagt
     5761 gggactttgt cgtgacaact gacatttcag agatgggcgc caactttaaa gctgaccgtg
     5821 tcatagattc caggagatgc ctaaagccgg tcatacttga tggcgagaga gtcattctgg
     5881 ctggacccat gcctgtcaca catgccagcg ctgcccagag gagggggcgc ataggcagga
     5941 atcccaacaa acctggagat gagtatctgt atggaggtgg gtgcgcagag actgacgaag
     6001 accatgcaca ctggcttgaa gcaagaatgc tccttgacaa tatttacctc caagatggcc
     6061 tcatagcttc gctctatcga cctgaggccg acaaagtagc agccattgag ggagagttca
     6121 agcttaggac ggagcaaagg aagacctttg tggaactcat gaaaagagga gatcttcctg
     6181 tttggctggc ctatcaggtt gcatctgccg gaataaccta cacagataga agatggtgct
     6241 ttgatggcac gaccaacaac accataatgg aagacagtgt gccggcagag gtgtggacca
     6301 gacacggaga gaaaagagtg ctcaaaccga ggtggatgga cgccagagtt tgttcagatc
     6361 atgcggccct gaagtcattc aaggagtttg ccgctgggaa aagaggagcg gcttttggag
     6421 tgatggaagc cctgggaaca ctgccaggac acatgacaga gagattccag gaagccattg
     6481 acaacctcgc tgtgctcatg cgggcagaga ctggaagcag gccttacaaa gccgcggcgg
     6541 cccaattgcc ggagacccta gagaccatta tgcttttggg gttgctggga acagtctcgc
     6601 tgggaatctt tttcgtcttg atgaggaaca agggcatagg gaagatgggc tttggaatgg
     6661 tgactcttgg ggccagcgca tggctcatgt ggctctcgga aattgagcca gccagaattg
     6721 catgtgtcct cattgttgtg ttcctattgc tggtggtgct catacctgag ccagaaaagc
     6781 aaagatctcc ccaggacaac caaatggcaa tcatcatcat ggtagcagta ggtcttctgg
     6841 gcttgattac cgccaatgaa ctcggatggt tggagagaac aaagagtgac ctaagccatc
     6901 taatgggaag gagagaggag ggggcaacca taggattctc aatggacatt gacctgcggc
     6961 cagcctcagc ttgggccatc tatgctgcct tgacaacttt cattacccca gccgtccaac
     7021 atgcagtgac cacttcatac aacaactact ccttaatggc gatggccacg caagctggag
     7081 tgttgtttgg tatgggcaaa gggatgccat tctacgcatg ggactttgga gtcccgctgc
     7141 taatgatagg ttgctactca caattaacac ccctgaccct aatagtggcc atcattttgc
     7201 tcgtggcgca ctacatgtac ttgatcccag ggctgcaggc agcagctgcg cgtgctgccc
     7261 agaagagaac ggcagctggc atcatgaaga accctgttgt ggatggaata gtggtgactg
     7321 acattgacac aatgacaatt gacccccaag tggagaaaaa gatgggacag gtgctactca
     7381 tagcagtagc cgtctccagc gccatactgt cgcggaccgc ctgggggtgg ggggaggctg
     7441 gggccctgat cacagctgca acttccactt tgtgggaagg ctctccgaac aagtactgga
     7501 actcctctac agccacttca ctgtgtaaca tttttagggg aagttacttg gctggagctt
     7561 ctctaatcta cacagtaaca agaaacgctg gcttggtcaa gagacgtggg ggtggaacag
     7621 gagagaccct gggagagaaa tggaaggccc gcttgaacca gatgtcggcc ctggagttct
     7681 actcctacaa aaagtcaggc atcaccgagg tgtgcagaga agaggcccgc cgcgccctca
     7741 aggacggtgt ggcaacggga ggccatgctg tgtcccgagg aagtgcaaag ctgagatggt
     7801 tggtggagcg gggatacctg cagccctatg gaaaggtcat tgatcttgga tgtggcagag
     7861 ggggctggag ttactacgcc gccaccatcc gcaaagttca agaagtgaaa ggatacacaa
     7921 aaggaggccc tggtcatgaa gaacccatgt tggtgcaaag ctatgggtgg aacatagtcc
     7981 gtcttaagag tggggtggac gtctttcata tggcggctga gccgtgtgac acgttgctgt
     8041 gtgacatagg tgagtcatca tctagtcctg aagtggaaga agcacggacg ctcagagtcc
     8101 tctccatggt gggggattgg cttgaaaaaa gaccaggagc cttttgtata aaagtgttgt
     8161 gcccatacac cagcactatg atggaaaccc tggagcgact gcagcgtagg tatgggggag
     8221 gactggtcag agtgccactc tcccgcaact ctacacatga gatgtactgg gtctctggag
     8281 cgaaaagcaa caccataaaa agtgtgtcca ccacgagcca gctcctcttg gggcgcatgg
     8341 acgggcctag gaggccagtg aaatatgagg aggatgtgaa tctcggctct ggcacgcggg
     8401 ctgtggtaag ctgcgctgaa gctcccaaca tgaagatcat tggtaaccgc attgaaagga
     8461 tccgcagtga gcacgcggaa acgtggttct ttgacgagaa ccacccatat aggacatggg
     8521 cttaccatgg aagctatgag gcccccacac aagggtcagc gtcctctcta ataaacgggg
     8581 ttgtcaggct cctgtcaaaa ccctgggatg tggtgactgg agtcacagga atagccatga
     8641 ccgacaccac accgtatggt cagcaaagag ttttcaagga aaaagtggac actagggtgc
     8701 cagaccccca agaaggcact cgtcaggtta tgagcatggt ctcttcctgg ttgtggaaag
     8761 agctaggcaa acacaaacgg ccacgagtct gtaccaaaga agagttcatc aacaaggttc
     8821 gtagcaatgc agcattaggg gcaatatttg aagaggaaaa agagtggaag actgcagtgg
     8881 aagctgtgaa cgatccaagg ttctgggctc tagtggacaa ggaaagagag caccacctga
     8941 gaggagagtg ccagagttgt gtgtacaaca tgatgggaaa aagagaaaag aaacaagggg
     9001 aatttggaaa ggccaagggc agccgcgcca tctggtatat gtggctaggg gctagatttc
     9061 tagagttcga agcccttgga ttcttgaacg aggatcactg gatggggaga gagaactcag
     9121 gaggtggtgt tgaagggctg ggattacaaa gactcggata tgtcctagaa gagatgagtc
     9181 gcataccagg aggaaggatg tatgcagatg acactgctgg ctgggacacc cgcatcagca
     9241 ggtttgatct ggagaatgaa gctctaatca ccaaccaaat ggagaaaggg cacagggcct
     9301 tggcattggc cataatcaag tacacatacc aaaacaaagt ggtaaaggtc cttagaccag
     9361 ctgaaaaagg gaagacagtt atggacatta tttcgagaca agaccaaagg gggagcggac
     9421 aagttgtcac ttacgctctt aacacattta ccaacctagt ggtgcaactc attcggaata
     9481 tggaggctga ggaagttcta gagatgcaag acttgtggct gctgcggagg tcagagaaag
     9541 tgaccaactg gttgcagagc aacggatggg ataggctcaa acgaatggca gtcagtggag
     9601 atgattgcgt tgtgaagcca attgatgata ggtttgcaca tgccctcagg ttcttgaatg
     9661 atatgggaaa agttaggaag gacacacaag agtggaaacc ctcaactgga tgggacaact
     9721 gggaagaagt tccgttttgc tcccaccact tcaacaagct ccatctcaag gacgggaggt
     9781 ccattgtggt tccctgccgc caccaagatg aactgattgg ccgggcccgc gtctctccag
     9841 gggcgggatg gagcatccgg gagactgctt gcctagcaaa atcatatgcg caaatgtggc
     9901 agctccttta tttccacaga agggacctcc gactgatggc caatgccatt tgttcatctg
     9961 tgccagttga ctgggttcca actgggagaa ctacctggtc aatccatgga aagggagaat
    10021 ggatgaccac tgaagacatg cttgtggtgt ggaacagagt gtggattgag gagaacgacc
    10081 acatggaaga caagacccca gttacgaaat ggacagacat tccctatttg ggaaaaaggg
    10141 aagacttgtg gtgtggatct ctcatagggc acagaccgcg caccacctgg gctgagaaca
    10201 ttaaaaacac agtcaacatg gtgcgcagga tcataggtga tgaagaaaag tacatggact
    10261 acctatccac ccaagttcgc tacttgggtg aagaagggtc tacacctgga gtgctgtaag
    10321 caccaatctt agtgttgtca ggcctgctag tcagccacag cttggggaaa gctgtgcagc
    10381 ctgtgacccc cccaggagaa gctgggaaac caagcctata gtcaggccga gaacgccatg
    10441 gcacggaaga agccatgctg cctgtgagcc cctcagagga cactgagtca aaaaacccca
    10501 cgcgcttgga ggcgcaggat gggaaaagaa ggtggcgacc ttccccaccc ttcaatctgg
    10561 ggcctgaact ggagatcagc tgtggatc

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
18525 18525 100% 0.0 100% KX447510.1
18480 18480 100% 0.0 99% KX447512.1
18480 18480 100% 0.0 99% KX369547.1
18474 18474 100% 0.0 99% KX447509.1
18471 18471 100% 0.0 99% KX447513.1
18471 18471 100% 0.0 99% KJ776791.1
18465 18465 100% 0.0 99% KX447515.1
18465 18465 100% 0.0 99% KX447511.1
18462 18462 100% 0.0 99% KX447514.1
18462 18462 100% 0.0 99% KU509998.3
18456 18456 100% 0.0 99% KX447516.1
18444 18444 100% 0.0 99% KX051563.1
18438 18438 100% 0.0 99% KX280026.1
18438 18438 100% 0.0 99% KU991811.1
18438 18438 100% 0.0 99% KU321639.1
18429 18429 100% 0.0 99% KU729218.1
18429 18429 100% 0.0 99% KU707826.1
18429 18429 100% 0.0 99% KU365779.1
18426 18426 100% 0.0 99% KX447517.1
18426 18426 100% 0.0 99% KX262887.1
18426 18426 100% 0.0 99% KX197192.1
18417 18417 100% 0.0 99% KX198135.1
18417 18417 100% 0.0 99% KU926309.1
18417 18417 100% 0.0 99% KU365780.1
18411 18411 100% 0.0 99% KU940228.1
18411 18411 100% 0.0 99% KU647676.1
18411 18411 100% 0.0 99% KU365777.1