niman Posted August 25, 2016 Report Share Posted August 25, 2016 Michigan H3N2v sequence, A/Michigan/84/2016, has H3 that matches 2015 New Jersey case and N2 matching 2012 human cases. This constellation is distinct from recently released 2016 human sequences from Michigan and Ohio. Link to comment Share on other sites More sharing options...
niman Posted August 25, 2016 Author Report Share Posted August 25, 2016 Isolate name: A/Michigan/84/2016 Isolate ID: EPI_ISL_232047 Passage details/history: OR Type: A / H3N2 Lineage: Sample information Collection date: 2016-08-11 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: United States / Michigan Additional location information: Patient age: Gender: Outbreak: Treatment: Specimen source: Institute information Originating lab: Michigan Department of Community Health Sample ID given by the sample provider: CL16-430446 ORIGINAL Address: Michigan Department of Community Health Viral Isolation and Molecular Testing 3350 N. Martin Luther King, Jr. Blvd Lansing, 48909 United States Submitting lab: Centers for Disease Control and Prevention Sample ID given by the submitting laboratory: 3000478560 Authors: Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence HA 3000478560_4 1701 EPI824767 NA 3000478560_6 1358 EPI824766 Submitter information Submitter: Jang, Yunho Submission Date: 2016-08-19 Last modifier: Jang, Yunho Last modified: 2016-08-19 Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States Link to comment Share on other sites More sharing options...
niman Posted August 25, 2016 Author Report Share Posted August 25, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI824767 A/Michigan/84/2016 (A/H3N2) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI573017 A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI573003 A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI600470 A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%) EPI573495 A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI573486 A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI573448 A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI573445 A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA) 3072.1 0.000000e+00 1688/1701 (99%) EPI573602 A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA) 3068.4 0.000000e+00 1687/1701 (99%) EPI573000 A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA) 3068.4 0.000000e+00 1687/1701 (99%) EPI669178 A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA) 3064.7 0.000000e+00 1687/1701 (99%) EPI584802 A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA) 3064.7 0.000000e+00 1687/1701 (99%) EPI685734 A/New Jersey/53/2015 (A/H3N2) segment 4 (HA) 3059.2 0.000000e+00 1686/1701 (99%) EPI678644 A/swine/Ohio/A01795365/2015 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%) EPI678347 A/swine/Ohio/A01857766/2015 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%) EPI703954 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%) EPI703878 A/swine/Ohio/A01895033/2015 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%) EPI687608 A/swine/Ohio/A01941023/2015 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%) EPI678584 A/swine/Ohio/A01944458/2015 (A/H3N2) segment 4 (HA) 3044.4 0.000000e+00 1683/1701 (98%) EPI704980 A/swine/Ohio/A01727442/2015 (A/H3N2) segment 4 (HA) 3042.6 0.000000e+00 1683/1701 (98%) EPI678350 A/swine/Arkansas/A01857979/2015 (A/H3N2) segment 4 (HA) 3042.6 0.000000e+00 1683/1701 (98%) EPI532373 A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA) 3025.9 0.000000e+00 1680/1701 (98%) EPI711740 A/swine/Indiana/A01729047/2016 (A/H3N2) segment 4 (HA) 3022.2 0.000000e+00 1680/1702 (98%) EPI573807 A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA) 3022.2 0.000000e+00 1679/1701 (98%) EPI542447 A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%) EPI534947 A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%) EPI538664 A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA) 3016.7 0.000000e+00 1678/1701 (98%) EPI533782 A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA) 3016.7 0.000000e+00 1678/1701 (98%) EPI778247 A/swine/North Dakota/A01895932/2016 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI623626 A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI574154 A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI550293 A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI531059 A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI530996 A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI460390 A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%) EPI597655 A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%) EPI545416 A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI545407 A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI542551 A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI538670 A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI532376 A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI460381 A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%) EPI597661 A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA) 3005.6 0.000000e+00 1676/1701 (98%) EPI542524 A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA) 3005.6 0.000000e+00 1676/1701 (98%) EPI593956 A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI573350 A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI572994 A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI559548 A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI558839 A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI558834 A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI558819 A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI550296 A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI548259 A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI545840 A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI510214 A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI510211 A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI510199 A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI510190 A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI510173 A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI507284 A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI505102 A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI504864 A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI460387 A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1677/1702 (98%) EPI460372 A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%) EPI542548 A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA) 3000.1 0.000000e+00 1675/1701 (98%) EPI586151 A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI559025 A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI558883 A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI558842 A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI545858 A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI545852 A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI545816 A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI545379 A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI538990 A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI530299 A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI530284 A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI508836 A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI542474 A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA) 2996.4 0.000000e+00 1672/1698 (98%) EPI573035 A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA) 2994.5 0.000000e+00 1674/1701 (98%) EPI508858 A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA) 2994.5 0.000000e+00 1674/1701 (98%) EPI584808 A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI573793 A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI573599 A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI542563 A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI542542 A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI530309 A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI505062 A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI398672 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA) 2989.0 0.000000e+00 1672/1699 (98%) EPI391413 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA) 2989.0 0.000000e+00 1672/1699 (98%) EPI704595 A/swine/Pennsylvania/A01727958/2015 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI684579 A/swine/North Carolina/A01795709/2015 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI678353 A/swine/North Carolina/A01945823/2015 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI623700 A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI600344 A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI586038 A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI573479 A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI573020 A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI559533 A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI557544 A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI557542 A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI545813 A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI542530 A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI531097 A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1674/1702 (98%) EPI509764 A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI505039 A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%) EPI558851 A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA) 2985.3 0.000000e+00 1671/1699 (98%) EPI620523 A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1672/1701 (98%) EPI600449 A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1672/1701 (98%) EPI600431 A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1672/1701 (98%) EPI396270 A/Indiana/133/2012 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1671/1699 (98%) EPI394913 A/Indiana/132/2012 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1671/1699 (98%) EPI388327 A/Indiana/14/2012 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1671/1699 (98%) EPI678281 A/swine/North Carolina/A01857750/2015 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI669209 A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI623703 A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI598964 A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI584734 A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI573818 A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI557534 A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%) EPI573452 A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1671/1701 (98%) EPI573011 A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1671/1701 (98%) EPI528431 A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI527870 A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI527113 A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI451202 A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI446888 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI446879 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI446800 A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI443550 A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI426887 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI414186 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI414170 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI408202 A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI406576 A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI406504 A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI404890 A/Iowa/16/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI401609 A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397913 A/Indiana/123/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397906 A/Illinois/11/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397905 A/Hawaii/03/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397662 A/Maryland/28/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397396 A/Indiana/93/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397210 A/Maryland/25/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI397006 A/Ohio/78/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI396262 A/Indiana/127/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI396254 A/Indiana/126/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI395883 A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI395259 A/Ohio/35/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI394944 A/Maryland/22/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI393306 A/Indiana/18/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI392926 A/Maryland/20/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI391404 A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI388352 A/Indiana/20/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI388346 A/Indiana/15/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI388298 A/Indiana/19/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI388282 A/Indiana/13/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI383528 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI381873 A/Hawaii/03/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI366030 A/Utah/10/2012 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI346493 A/West Virginia/06/2011 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1670/1699 (98%) EPI760179 A/swine/Pennsylvania/A01733733/2016 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI684572 A/swine/Ohio/A01797012/2015 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI672951 A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI642513 A/Michigan/39/2015 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI620526 A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI559530 A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%) EPI678650 A/swine/North Carolina/A01945473/2015 (A/H0) segment 4 (HA) 2974.2 0.000000e+00 1670/1701 (98%) EPI623651 A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA) 2974.2 0.000000e+00 1670/1701 (98%) EPI398492 A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA) 2974.2 0.000000e+00 1669/1699 (98%) EPI395331 A/West Virginia/06/2011 (A/H3N2) segment 4 (HA) 2974.2 0.000000e+00 1669/1699 (98%) EPI395328 A/West Virginia/06/2011 (A/H3N2) segment 4 (HA) 2974.2 0.000000e+00 1669/1699 (98%) EPI647569 A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1670/1701 (98%) EPI573566 A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1670/1700 (98%) EPI509734 A/swine/Iowa/13H075/2013 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI499946 A/swine/Iowa/13H087/2013 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI493012 A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI492349 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI446927 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI446919 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI446863 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI446830 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI443558 A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI443526 A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI433540 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI433533 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI433306 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI433298 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI424073 A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI414178 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI414156 A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI408199 A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI406530 A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI401702 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI401684 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI401680 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI401667 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI400105 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398542 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398534 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398526 A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398518 A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398500 A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI398479 A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397969 A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397962 A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397954 A/Ohio/85/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397939 A/Ohio/41/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397548 A/Ohio/84/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397540 A/Ohio/56/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397532 A/Ohio/47/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397524 A/Ohio/44/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397516 A/Ohio/36/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397503 A/Indiana/104/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397446 A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397432 A/Ohio/81/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397426 A/Minnesota/15/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397385 A/Indiana/138/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397351 A/Ohio/37/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397340 A/Indiana/150/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI397089 A/Indiana/52/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396299 A/Maryland/23/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396280 A/Indiana/144/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396208 A/Indiana/149/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396192 A/Ohio/77/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396183 A/Indiana/77/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI396175 A/Ohio/80/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395874 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395866 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395718 A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395711 A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395357 A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395344 A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395270 A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI395267 A/Ohio/65/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI394937 A/Ohio/75/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI394933 A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI394921 A/Ohio/69/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI394077 A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393914 A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393782 A/Ohio/74/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393702 A/Ohio/64/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393695 A/West Virginia/16/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393681 A/West Virginia/10/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393673 A/Ohio/71/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393519 A/Indiana/65/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393317 A/Ohio/38/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393311 A/West Virginia/09/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393299 A/Indiana/31/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI393298 A/Indiana/21/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) EPI392748 A/Wisconsin/22/2012 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1669/1699 (98%) Link to comment Share on other sites More sharing options...
niman Posted August 25, 2016 Author Report Share Posted August 25, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI824766 A/Michigan/84/2016 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1358/1358 (100%) EPI704981 A/swine/Ohio/A01727442/2015 (A/H3N2) segment 6 (NA) 2447.9 0.000000e+00 1347/1358 (99%) EPI703955 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 6 (NA) 2447.9 0.000000e+00 1347/1358 (99%) EPI703879 A/swine/Ohio/A01895033/2015 (A/H3N2) segment 6 (NA) 2447.9 0.000000e+00 1347/1358 (99%) EPI678351 A/swine/Arkansas/A01857979/2015 (A/H3N2) segment 6 (NA) 2447.9 0.000000e+00 1347/1358 (99%) EPI641459 A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1347/1358 (99%) EPI669180 A/swine/Indiana/A01260958/2015 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1345/1358 (99%) EPI573600 A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1345/1358 (99%) EPI558823 A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA) 2431.3 0.000000e+00 1344/1358 (98%) EPI573810 A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA) 2420.2 0.000000e+00 1342/1358 (98%) EPI533783 A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA) 2420.2 0.000000e+00 1342/1358 (98%) EPI531060 A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA) 2420.2 0.000000e+00 1342/1358 (98%) EPI532377 A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA) 2416.5 0.000000e+00 1341/1358 (98%) EPI573351 A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI545408 A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI545380 A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI542531 A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI538665 A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI534948 A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1341/1358 (98%) EPI532374 A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1340/1358 (98%) EPI530997 A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1340/1358 (98%) EPI574155 A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI573480 A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI559534 A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI558882 A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI558852 A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI558843 A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI550294 A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI542448 A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI538671 A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1340/1358 (98%) EPI557541 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1338/1356 (98%) EPI669173 A/swine/Indiana/A01260933/2015 (A/H1N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI647635 A/swine/Indiana/A01260918/2015 (A/H0) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI572995 A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI545841 A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI542564 A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI542552 A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI542543 A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI533959 A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1339/1358 (98%) EPI685646 A/swine/North Carolina/A02025176/2015 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1338/1358 (98%) EPI557543 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1337/1356 (98%) EPI557533 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1337/1356 (98%) EPI542549 A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1338/1358 (98%) EPI647624 A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI620515 A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI612572 A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI600450 A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI600348 A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI573036 A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI573021 A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI559531 A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI559026 A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI558840 A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI558835 A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI558820 A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI550297 A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI548260 A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI460388 A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI460382 A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI460373 A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI460367 A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI393526 A/West Virginia/15/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1338/1358 (98%) EPI593957 A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1337/1358 (98%) EPI750301 A/swine/North Carolina/A01732197/2016 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI709842 A/swine/North Carolina/A01728545/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI678633 A/swine/North Carolina/A01945452/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI678334 A/swine/North Carolina/A01945753/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI672888 A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI600345 A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI598965 A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI584809 A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI559549 A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI542525 A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI502642 A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI460391 A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI446797 A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI443547 A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI443523 A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI433303 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI433295 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI427179 A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI414172 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI406470 A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI401685 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI401681 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI400106 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI400096 A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI398520 A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI398502 A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI398494 A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI398486 A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI398034 A/Maryland/22/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397661 A/Maryland/28/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397620 A/Maryland/25/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397531 A/Ohio/47/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397523 A/Ohio/44/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397515 A/Ohio/36/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397431 A/Ohio/81/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397350 A/Ohio/37/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397208 A/Ohio/78/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI397088 A/Indiana/52/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI396276 A/Indiana/135/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI396261 A/Indiana/127/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI396253 A/Indiana/126/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI396234 A/Ohio/34/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI395885 A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI395336 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI395266 A/Ohio/65/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI395258 A/Ohio/35/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI394062 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393694 A/West Virginia/16/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393680 A/West Virginia/10/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393672 A/Ohio/71/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393316 A/Ohio/38/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393310 A/West Virginia/09/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI393305 A/Indiana/18/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI392925 A/Maryland/20/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1335/1355 (98%) EPI392704 A/Indiana/52/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI392683 A/Indiana/13/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1337/1358 (98%) EPI669248 A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1336/1358 (98%) EPI396298 A/Maryland/23/2012 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1335/1356 (98%) EPI393781 A/Ohio/74/2012 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1335/1356 (98%) EPI684573 A/swine/Ohio/A01797012/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI669155 A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI620491 A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI573808 A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI573794 A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI573453 A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI530300 A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI530285 A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI510212 A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI507285 A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI505103 A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI446924 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI446916 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI446868 A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI446860 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI446835 A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI433542 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI433535 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI408203 A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI406575 A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI401703 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI401688 A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI398671 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI398544 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI398536 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397946 A/Ohio/84/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397904 A/Hawaii/03/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397626 A/Ohio/57/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397623 A/Indiana/150/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397554 A/Ohio/86/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397502 A/Indiana/104/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397425 A/Minnesota/15/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397403 A/Indiana/99/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI396207 A/Indiana/149/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI396191 A/Ohio/77/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI396182 A/Indiana/77/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI395876 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI395868 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI394925 A/Illinois/11/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI394059 A/Indiana/38/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI393701 A/Ohio/64/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI393518 A/Indiana/65/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI393297 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI393291 A/Indiana/38/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI392752 A/Indiana/16/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI392698 A/Indiana/46/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI392695 A/Indiana/43/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI392691 A/Indiana/31/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI383539 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI346492 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1336/1358 (98%) EPI397097 A/Indiana/103/2012 (A/H3N2) segment 6 (NA) 2385.1 0.000000e+00 1335/1357 (98%) EPI388289 A/Indiana/17/2012 (A/H3N2) segment 6 (NA) 2385.1 0.000000e+00 1331/1351 (98%) EPI663314 A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA) 2383.3 0.000000e+00 1335/1358 (98%) EPI504865 A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA) 2383.3 0.000000e+00 1335/1358 (98%) EPI684593 A/swine/North Carolina/A01945973/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI682818 A/swine/North Carolina/A01945969/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI663381 A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI647585 A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI647505 A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI623704 A/swine/Indiana/A01260882/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI623701 A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI590660 A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI586152 A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI545817 A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1336/1359 (98%) EPI545814 A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI545417 A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1336/1359 (98%) EPI530310 A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI509736 A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI505063 A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI492350 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI488006 A/swine/USA/A01291038/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI453567 A/swine/Indiana/A01260230/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI446885 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI446876 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI446827 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI443555 A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI443539 A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI443531 A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI443515 A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI443507 A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI426886 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI414188 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI404892 A/Iowa/16/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI401610 A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI400102 A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI398123 A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI398107 A/Ohio/90/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397931 A/Ohio/19/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397918 A/Ohio/17/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397750 A/Ohio/87/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397627 A/Ohio/63/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397625 A/Ohio/43/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397624 A/Ohio/80/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397621 A/Ohio/79/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397547 A/Ohio/83/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397539 A/Ohio/56/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397395 A/Indiana/93/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397384 A/Indiana/138/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397377 A/Indiana/123/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI397363 A/Ohio/23/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI396279 A/Indiana/144/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI396269 A/Indiana/133/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395958 A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395950 A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395934 A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395921 A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395860 A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395852 A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395742 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395330 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395327 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI395250 A/Indiana/152/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI394936 A/Ohio/75/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI394932 A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI394920 A/Ohio/69/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI394912 A/Indiana/132/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI394905 A/Ohio/62/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI393696 A/Indiana/20/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI393687 A/Ohio/23/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI393666 A/Ohio/28/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI393510 A/Ohio/52/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI393294 A/Ohio/24/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI392677 A/Ohio/13/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI388365 A/Ohio/17/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI388345 A/Indiana/15/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI388338 A/Ohio/16/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI388329 A/Ohio/20/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) EPI388320 A/Ohio/18/2012 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1335/1358 (98%) Link to comment Share on other sites More sharing options...
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