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Full 2015 Zika Sequences From Brazil

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Evandro Chagas Institute has released four full Zika sequences from Brazil.

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LOCUS       KU365777               10662 bp    RNA     linear   VRL 26-JAN-2016
DEFINITION  Zika virus strain BeH818995 polyprotein gene, complete cds.
ACCESSION   KU365777
VERSION     KU365777.1  GI:975885964
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus; Spondweni virus group.
REFERENCE   1  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Genome sequences of four Zika virus isolates from Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2015) Center for Technological Innovation,
            Evandro Chagas Institute, BR 316, Km 07, s/n, Ananindeua, Para
            67030-000, Brazil
COMMENT     EMAIL: bioinformatica@iec.pa.gov.br
            ##Assembly-Data-START##
            Assembly method: Mira 4.0 and Geneious 7.0
            Sequencing Technology: Ion and 454
            ##Assembly-Data-END##.
FEATURES             Location/Qualifiers
     source          1..10662
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /strain="BeH818995"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Brazil"
                     /collection_date="2015"
     CDS             94..10365
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AMA12084.1"
                     /db_xref="GI:975885965"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVDLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gtgaatcaga ctgcgacagt tcgagtttga agcgaaagct agcaacagta tcaacaggtt
       61 ttattttgga tttggaaacg agagtttctg gtcatgaaaa acccaaaaaa gaaatccgga
      121 ggattccgga ttgtcaatat gctaaaacgc ggagtagccc gtgtgagccc ctttgggggc
      181 ttgaagaggc tgccagccgg acttctgctg ggtcatgggc ccatcaggat ggtcttggcg
      241 attctagcct ttttgagatt cacggcaatc aagccatcac tgggtctcat caatagatgg
      301 ggttcagtgg ggaaaaaaga ggctatggaa ataataaaga agttcaagaa agatctggct
      361 gccatgctga gaataatcaa tgctaggaag gagaagaaga gacgaggcgc agatactagt
      421 gtcggaattg ttggcctcct gctgaccaca gctatggcag cggaggtcac tagacgtggg
      481 agtgcatact atatgtactt ggacagaaac gatgctgggg aggccatatc ttttccaacc
      541 acattgggga tgaataagtg ttatatacag atcatggatc ttggacacat gtgtgatgcc
      601 accatgagct atgaatgccc tatgctggat gagggggtgg aaccagatga cgtcgattgt
      661 tggtgcaaca cgacgtcaac ttgggttgtg tacggaacct gccatcacaa aaaaggtgaa
      721 gcacggagat ctagaagagc tgtgacgctc ccctcccatt ccactaggaa gctgcaaacg
      781 cggtcgcaaa cctggttgga atcaagagaa tacacaaagc acttgattag agtcgaaaat
      841 tggatattta ggaaccctgg cttcgcgtta gcagcagctg ccatcgcttg gcttttggga
      901 agctcaacga gccaaaaagt catatacttg gtcatgatac tgctgattgc cccggcatac
      961 agcatcaggt gcataggagt cagcaatagg gactttgtgg aaggtatgtc aggtgggacc
     1021 tgggttgatg ttgtcttgga acatggaggt tgtgtcaccg taatggcaca ggacaaaccg
     1081 actgtcgaca tagagctggt tacaacaaca gtcagcaaca tggcggaggt aagatcctac
     1141 tgctatgagg catcaatatc agacatggct tcggacagcc gctgcccaac acaaggtgaa
     1201 gcctaccttg acaagcaatc agacactcaa tatgtctgca aaagaacgtt agtggacaga
     1261 ggctggggaa atggatgtgg actttttggc aaagggagcc tggtgacatg cgctaagttt
     1321 gcatgctcca agaaaatgac cgggaagagc atccagccag agaatctgga gtaccggata
     1381 atgctgtcag ttcatggctc ccagcacagt gggatgattg ttaatgacac aggacatgaa
     1441 actgatgaga atagagcgaa agttgagata acgcccaatt caccaagagc cgaagccacc
     1501 ctggggggtt ttggaagcct aggacttgat tgtgaaccga ggacaggcct tgacttttca
     1561 gatttgtatt acttgactat gaataacaag cactggttgg ttcacaagga gtggttccac
     1621 gacattccat taccttggca cgctggggca gacaccggaa ctccacactg gaacaacaaa
     1681 gaagcactgg tagagttcaa ggacgcacat gccaaaaggc aaactgtcgt ggttctaggg
     1741 agtcaagaag gagcagttca cacggccctt gctggagctc tggaggctga gatggatggt
     1801 gcaaagggaa ggctgtcctc tggccacttg aaatgtcgcc tgaaaatgga taaacttaga
     1861 ttgaagggcg tgtcatactc cttgtgtact gcagcgttca cattcaccaa gatcccggct
     1921 gaaacactgc acgggacagt cacagtggag gtacagtacg cagggacaga tggaccttgc
     1981 aaggttccag ctcagatggc ggtggacatg caaactctga ccccagttgg gaggttgata
     2041 accgctaacc ccgtaatcac tgaaagcact gagaactcta agatgatgct ggaacttgat
     2101 ccaccatttg gggactctta cattgtcata ggagtcgggg agaagaagat cacccaccac
     2161 tggcacagga gtggcagcac cattggaaaa gcatttgaag ccactgtgag aggtgccaag
     2221 agaatggcag tcttgggaga cacagcctgg gactttggat cagttggagg cgctctcaac
     2281 tcattgggca agggcatcca tcaaattttt ggagcagctt tcaaatcatt gtttggagga
     2341 atgtcctggt tctcacaaat tctcattgga acgttgctga tgtggttggg tctgaacaca
     2401 aagaatggat ctatttccct tatgtgcttg gccttagggg gagtgttgat cttcttatcc
     2461 acagccgtct ctgctgatgt ggggtgctcg gtggacttct caaagaagga gacgagatgc
     2521 ggtacagggg tgttcgtcta taacgacgtt gaagcctgga gggacaggta caagtaccat
     2581 cctgactccc cccgtagatt ggcagcagca gtcaagcaag cctgggaaga tggtatctgc
     2641 gggatctcct ctgtttcaag aatggaaaac atcatgtgga gatcagtaga aggggagctc
     2701 aacgcaatcc tggaagagaa tggagttcaa ctgacggtcg ttgtgggatc tgtaaaaaac
     2761 cccatgtgga gaggtccaca gagattgccc gtgcctgtga acgagctgcc ccacggctgg
     2821 aaggcttggg ggaaatcgta cttcgtcaga gcagcaaaga caaataacag ctttgtcgtg
     2881 gatggtgaca cactgaagga atgcccactc aaacatagag catggaacag ctttcttgtg
     2941 gaggatcatg ggttcggggt atttcacact agtgtctggc tcaaggttag agaagattat
     3001 tcattagagt gtgatccagc cgttattgga acagctgtta agggaaagga ggctgtacac
     3061 agtgatctag gctactggat tgagagtgag aagaatgaca catggaggct gaagagggcc
     3121 catctgatcg agatgaaaac atgtgaatgg ccaaagtccc acacattgtg gacagatgga
     3181 atagaagaga gtgatctgat catacccaag tctttagctg ggccactcag ccatcacaat
     3241 accagagagg gctacaggac ccaaatgaaa gggccatggc acagtgaaga gcttgaaatt
     3301 cggtttgagg aatgcccagg cactaaggtc cacgtggagg aaacatgtgg aacaagagga
     3361 ccatctctga gatcaaccac tgcaagcgga agggtgatcg aggaatggtg ctgcagggag
     3421 tgcacaatgc ccccactgtc gttccgggct aaagatggct gttggtatgg aatggagata
     3481 aggcccagga aagaaccaga aagcaactta gtaaggtcaa tggtgactgc aggatcaact
     3541 gatcacatgg accacttctc ccttggagtg cttgtgattc tgctcatggt gcaggaaggg
     3601 ctgaagaaga gaatgaccac aaagatcatc ataagcacat caatggcagt gctggtagct
     3661 atgatcctgg gaggattttc aatgagtgac ctggctaagc ttgcaatttt gatgggtgcc
     3721 accttcgcgg aaatgaacac tggaggagat gtagctcatc tggcgctgat agcggcattc
     3781 aaagtcagac cagcgttgct ggtatctttc atcttcagag ctaattggac accccgtgaa
     3841 agcatgctgc tggccttggc ctcgtgtctt ttgcaaactg cgatctccgc cttggaaggc
     3901 gacctgatgg ttctcatcaa tggttttgct ttggcctggt tggcaatacg agcgatggtt
     3961 gttccacgca ctgataacat caccttggca atcctggctg ctctgacacc actggcccgg
     4021 ggcacactgc ttgtggcgtg gagagcaggc cttgctactt gcggggggtt tatgctcctc
     4081 tctctgaagg gaaaaggcag tgtgaagaag aacttaccat ttgtcatggc cctgggacta
     4141 accgctgtga ggctggtcga ccccatcaac gtggtgggac tgctgttgct cacaaggagt
     4201 gggaagcgga gctggccccc tagcgaagta ctcacagctg ttggcctgat atgcgcattg
     4261 gctggagggt tcgccaaggc agatatagag atggctgggc ccatggccgc ggtcggtctg
     4321 ctaattgtca gttacgtggt ctcaggaaag agtgtggaca tgtacattga aagagcaggt
     4381 gacatcacat gggaaaaaga tgcggaagtc actggaaaca gtccccggct cgatgtggcg
     4441 ctagatgaga gtggtgattt ctccctggtg gaggatgacg gtccccccat gagagagatc
     4501 atactcaagg tggtcctgat gaccatctgt ggcatgaacc caatagccat accctttgca
     4561 gctggagcgt ggtacgtata cgtgaagact ggaaaaagga gtggtgctct atgggatgtg
     4621 cctgctccca aggaagtaaa aaagggggag accacagatg gagtgtacag agtaatgact
     4681 cgtagactgc taggttcaac acaagttgga gtgggagtta tgcaagaggg ggtctttcac
     4741 actatgtggc acgtcacaaa aggatccgcg ctgagaagcg gtgaagggag acttgatcca
     4801 tactggggag atgtcaagca ggatctggtg tcatactgtg gtccatggaa gctagatgcc
     4861 gcctgggacg ggcacagcga ggtgcagctc ttggccgtgc cccccggaga gagagcgagg
     4921 aacatccaga ctctgcccgg aatatttaag acaaaggatg gggacattgg agcggttgcg
     4981 ctggattacc cagcaggaac ttcaggatct ccaatcctag acaagtgtgg gagagtgata
     5041 ggactttatg gcaatggggt cgtgatcaaa aatgggagtt atgttagtgc catcacccaa
     5101 gggaggaggg aggaagagac tcctgttgag tgcttcgagc cttcgatgct gaagaagaag
     5161 cagctaactg tcttagactt gcatcctgga gctgggaaaa ccaggagagt tcttcctgaa
     5221 atagtccgtg aagccataaa aacaagactc cgcaccgtga tcttagctcc aaccagggtt
     5281 gtcgctgctg aaatggagga ggcccttaga gggcttccag tgcgttatat gacaacagca
     5341 gtcaatgtca cccactctgg aacagaaatc gtcgacttaa tgtgccatgc caccttcact
     5401 tcacgtctac tacagccaat cagagtcccc aactataatc tgtatattat ggatgaggcc
     5461 cacttcacag atccctcaag tatagcagca agaggataca tttcaacaag ggttgagatg
     5521 ggcgaggcgg ctgccatctt catgaccgcc acgccaccag gaacccgtga cgcatttccg
     5581 gactccaact caccaattat ggacaccgaa gtggaagtcc cagagagagc ctggagctca
     5641 ggctttgatt gggtgacgga tcattctgga aaaacagttt ggtttgttcc aagcgtgagg
     5701 aacggcaatg agatcgcagc ttgtctgaca aaggctggaa aacgggtcat acagctcagc
     5761 agaaagactt ttgagacaga gttccagaaa acaaaacatc aagagtggga ctttgtcgtg
     5821 acaactgaca tttcagagat gggcgccaac tttaaagctg accgtgtcat agattccagg
     5881 agatgcctaa agccggtcat acttgatggc gagagagtca ttctggctgg acccatgcct
     5941 gtcacacatg ccagcgctgc ccagaggagg gggcgcatag gcaggaatcc caacaaacct
     6001 ggagatgagt atctgtatgg aggtgggtgc gcagagactg acgaagacca tgcacactgg
     6061 cttgaagcaa gaatgctcct tgacaatatt tacctccaag atggcctcat agcctcgctc
     6121 tatcgacctg aggccgacaa agtagcagcc attgagggag agttcaagct taggacggag
     6181 caaaggaaga cctttgtgga actcatgaaa agaggagatc ttcctgtttg gctggcctat
     6241 caggttgcat ctgccggaat aacctacaca gatagaagat ggtgctttga tggcacgacc
     6301 aacaacacca taatggaaga cagtgtgccg gcagaggtgt ggaccagaca cggagagaaa
     6361 agagtgctca aaccgaggtg gatggacgcc agagtttgtt cagatcatgc ggccctgaag
     6421 tcattcaagg agtttgccgc tgggaaaaga ggagcggctt ttggagtgat ggaagccctg
     6481 ggaacactgc caggacacat gacagagaga ttccaggaag ccattgacaa cctcgctgtg
     6541 ctcatgcggg cagagactgg aagcaggcct tacaaagccg cggcggccca attgccggag
     6601 accctagaga ccattatgct tttggggttg ctgggaacag tctcgctggg aatcttcttc
     6661 gtcttgatga ggaacaaggg catagggaag atgggctttg gaatggtgac tcttggggcc
     6721 agcgcatggc tcatgtggct ctcggaaatt gagccagcca gaattgcatg tgtcctcatt
     6781 gttgtgtttc tattgctggt ggtgctcata cctgagccag aaaagcaaag atctccccag
     6841 gacaaccaaa tggcaatcat catcatggta gcagtaggtc ttctgggctt gattaccgcc
     6901 aatgaactcg gatggttgga gagaacaaag agtgacctaa gccatctaat gggaaggaga
     6961 gaggaggggg caaccatagg attctcaatg gacattgacc tgcggccagc ctcagcttgg
     7021 gccatctatg ctgccttgac aactttcatt accccagccg tccaacatgc agtgaccact
     7081 tcatacaaca actactcctt aatggcgatg gccacgcaag ctggagtgtt gtttggtatg
     7141 ggcaaaggga tgccattcta cgcatgggac tttggagtcc cgctgctaat gataggttgc
     7201 tactcacaat taacacccct gaccctaata gtggccatca ttttgctcgt ggcgcactac
     7261 atgtacttga tcccagggct gcaggcagca gctgcgcgtg ctgcccagaa gagaacggca
     7321 gctggcatca tgaagaaccc tgttgtggat ggaatagtgg tgactgacat tgacacaatg
     7381 acaattgacc cccaagtgga gaaaaagatg ggacaggtgc tactcatagc agtagccgtc
     7441 tccagcgcca tactgtcgcg gaccgcctgg gggtgggggg aggctggggc cctgatcaca
     7501 gccgcaactt ccactttgtg ggaaggctct ccgaacaagt actggaactc ctctacagcc
     7561 acttcactgt gtaacatttt taggggaagt tacttggctg gagcttctct aatctacaca
     7621 gtaacaagaa acgctggctt ggtcaagaga cgtgggggtg gaacaggaga gaccctggga
     7681 gagaaatgga aggcccgctt gaaccagatg tcggccctgg agttctactc ctacaaaaag
     7741 tcaggcatca ccgaggtgtg cagagaagag gcccgccgcg ccctcaagga cggtgtggca
     7801 acgggaggcc atgctgtgtc ccgaggaagt gcaaagctga gatggttggt ggagcgggga
     7861 tacctgcagc cctatggaaa ggtcattgat cttggatgtg gcagaggggg ctggagttac
     7921 tacgccgcca ccatccgcaa agttcaagaa gtgaaaggat acacaaaagg aggccctggt
     7981 catgaagaac ccgtgttggt gcaaagctat gggtggaaca tagtccgtct taagagtggg
     8041 gtggacgtct ttcatatggc ggctgagccg tgtgacacgt tgctgtgtga cataggtgag
     8101 tcatcatcta gtcctgaagt ggaagaagca cggacgctca gagtcctctc catggtgggg
     8161 gattggcttg aaaaaagacc aggagccttt tgtataaagg tgttgtgccc atacaccagc
     8221 actatgatgg aaaccctgga gcgactgcag cgtaggtatg ggggaggact ggtcagagtg
     8281 ccactctccc gcaactctac acatgagatg tattgggtct ctggagcgaa aagcaacacc
     8341 ataaaaagtg tgtccaccac gagccagctc ctcttggggc gcatggacgg gcctaggagg
     8401 ccagtgaaat atgaggagga tgtggatctc ggctctggca cgcgggctgt ggtaagctgc
     8461 gctgaagctc ccaacatgaa gatcattggt aaccgcattg aaaggatccg cagtgagcac
     8521 gcggaaacgt ggttctttga cgagaaccac ccatatagga catgggctta ccatggaagc
     8581 tatgaggccc ccacacaagg gtcagcgtcc tctctaataa acggggttgt caggctcctg
     8641 tcaaaaccct gggatgtggt gactggagtc acaggaatag ccatgaccga caccacaccg
     8701 tatggtcagc aaagagtttt caaggaaaaa gtggacacta gggtgccaga cccccaagaa
     8761 ggcactcgtc aggttatgag catggtctct tcctggttgt ggaaagagct aggcaaacac
     8821 aaacggccac gagtctgtac caaagaagag ttcatcaaca aggttcgtag caatgcagca
     8881 ttaggggcaa tatttgaaga ggaaaaagag tggaagactg cagtggaagc tgtgaacgat
     8941 ccaaggttct gggctctagt ggataaggaa agagagcacc acctgagagg agagtgccag
     9001 agttgtgtgt acaacatgat gggaaaaaga gaaaagaaac aaggggaatt tggaaaggcc
     9061 aagggcagcc gcgccatctg gtatatgtgg ctaggggcta gatttctaga gttcgaagcc
     9121 cttggattct tgaacgagga tcactggatg gggagagaga actcaggagg tggtgttgaa
     9181 gggctgggat tacaaagact cggatatgtc ctagaagaga tgagtcgtat accaggagga
     9241 aggatgtatg cagatgacac tgctggctgg gacacccgca tcagcaggtt tgatctggag
     9301 aatgaagctc taatcaccaa ccaaatggaa aaagggcaca gggccttggc attggccata
     9361 atcaagtaca cataccaaaa caaagtggta aaggtcctta gaccagctga aaaagggaaa
     9421 acagttatgg acattatttc gagacaagac caaaggggga gcggacaagt tgtcacttac
     9481 gctcttaaca catttaccaa cctagtggtg caactcattc ggaatatgga ggctgaggaa
     9541 gttctagaga tgcaagactt gtggctgctg cggaggtcag agaaagtgac caactggttg
     9601 cagagcaacg gatgggatag gctcaaacga atggcagtca gtggagatga ttgcgttgtg
     9661 aagccaattg atgataggtt tgcacatgcc ctcaggttct tgaatgatat gggaaaagtt
     9721 aggaaggaca cacaagagtg gaaaccctca actggatggg acaactggga agaagttccg
     9781 ttttgctccc accacttcaa caagctccat ctcaaggacg ggaggtccat tgtggttccc
     9841 tgccgccacc aagatgaact gattggccgg gcccgcgtct ctccaggggc gggatggagc
     9901 atccgggaga ctgcttgcct agcaaaatca tatgcgcaaa tgtggcagct cctttatttc
     9961 cacagaaggg acctccgact gatggccaat gccatttgtt catctgtgcc agttgactgg
    10021 gttccaactg ggagaactac ctggtcaatc catggaaagg gagaatggat gaccactgaa
    10081 gacatgcttg tggtgtggaa cagagtgtgg attgaggaga acgaccacat ggaagacaag
    10141 accccagtta cgaaatggac agacatcccc tatttgggaa aaagggaaga cttgtggtgt
    10201 ggatctctca tagggcacag accgcgcacc acctgggctg agaacattaa aaacacagtc
    10261 aacatggtgc gcaggatcat aggtgatgaa gaaaagtaca tggactacct atccacccaa
    10321 gttcgctact tgggtgaaga agggtctaca cctggagtgc tgtaagcacc agtcttaatg
    10381 ttgtcaggcc tgctagtcag ccacagcttg gggaaagctg tgcagcctgt gaccccccag
    10441 gagaagctgg gaaaccaagc ctatagtcag gccgagaacg ccatggcacg gaagaagcca
    10501 tgctgcctgt gagcccctca gaggacactg agtcaaaaaa ccccacgcgc ttggaggcgc
    10561 aggatgggaa aagaaggtgg cgaccttccc cacccttcaa tctggggcct gaactggaga
    10621 tcagctgtgg atctccagaa gagggactag tggttagagg ag

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Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
190681906899%0.099%KU321639.1
190031900399%0.099%KJ776791.1
185831858397%0.099%KU312312.1
177571775796%0.098%JN860885.1
177031770395%0.099%KF993678.1
175941759496%0.098%EU545988.1
164661646696%0.096%HQ234499.1
1392513925100%0.089%LC002520.1
1392313923100%0.089%KF268949.1
1392313923100%0.089%KF268948.1
1391613916100%0.089%KF268950.1
1386713867100%0.089%AY632535.2
133291332996%0.089%KF383115.1
133291332996%0.089%HQ234498.1
133081330896%0.089%KF383119.1
132841328496%0.089%DQ859059.1
132701327096%0.089%KF383116.1
132631326396%0.089%HQ234501.1
132001320096%0.088%KF383117.1
131831318396%0.088%HQ234500.1
129941306296%0.088%KF383118.1
129091290993%0.089%KF383121.1
108861088693%0.084%KF383120.1
5077507726%0.099%KU312314.1
5052505226%0.099%KU312313.1
3452345218%0.099%KU312315.1
2856419191%0.071%DQ859064.1
2686268614%0.099%KJ634273.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
159715978%0.099%KJ873160.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134613467%0.098%KM851038.1

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LOCUS       KU365778               10727 bp    RNA     linear   VRL 26-JAN-2016
DEFINITION  Zika virus strain BeH819015 polyprotein gene, complete cds.
ACCESSION   KU365778
VERSION     KU365778.1  GI:975885966
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus; Spondweni virus group.
REFERENCE   1  (bases 1 to 10727)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Genome sequences of four Zika virus isolates from Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10727)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2015) Center for Technological Innovation,
            Evandro Chagas Institute, BR 316, Km 07, s/n, Ananindeua, Para
            67030-000, Brazil
COMMENT     EMAIL: bioinformatica@iec.pa.gov.br
            ##Assembly-Data-START##
            Assembly method: Mira 4.0 and Geneious 7.0
            Sequencing Technology: Ion and 454
            ##Assembly-Data-END##.
FEATURES             Location/Qualifiers
     source          1..10727
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /strain="BeH819015"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Brazil"
                     /collection_date="2015"
     CDS             95..10366
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AMA12085.1"
                     /db_xref="GI:975885967"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 tgtgaatcag actgcgacag ttcgagtttg aagcgaaagc tagcaacagt atcaacaggt
       61 tttattttgg atttggaaac gagagtttct ggtcatgaaa aacccaaaaa agaaatccgg
      121 aggattccgg attgtcaata tgctaaaacg cggagtagcc cgtgtgagcc cctttggggg
      181 cttgaagagg ctgccagccg gacttctgct gggtcatggg cccatcagga tggtcttggc
      241 gattctagcc tttttgagat tcacggcaat caagccatca ctgggtctca tcaatagatg
      301 gggttcagtt gggaaaaaag aggctatgga aataataaag aagttcaaga aagatctggc
      361 tgccatgctg agaataatca atgctaggaa ggagaagaag agacgaggcg cagatactag
      421 tgtcggaatt gttggcctcc tgctgaccac agctatggca gcggaggtca ctagacgtgg
      481 gagtgcatac tatatgtact tggacagaaa cgatgctggg gaggccatat cttttccaac
      541 cacattgggg atgaataagt gttatataca gatcatggat cttggacaca tgtgtgatgc
      601 caccatgagc tatgaatgcc ctatgctgga tgagggggtg gaaccagatg acgtcgattg
      661 ttggtgcaac acgacgtcaa cttgggttgt gtacggaacc tgccatcaca aaaaaggtga
      721 agcacggaga tctagaagag ctgtgacgct cccctcccat tccactagga agctgcaaac
      781 gcggtcgcaa acctggttgg aatcaagaga atacacaaag cacttgatta gagtcgaaaa
      841 ttggatattc aggaaccctg gcttcgcgtt agcagcagct gccatcgctt ggcttttggg
      901 aagctcaacg agccaaaaag tcatatactt ggtcatgata ctgctgattg ccccggcata
      961 cagcatcagg tgcataggag tcagcaatag ggactttgtg gaaggtatgt caggtgggac
     1021 ttgggttgat gttgtcttgg aacatggagg ttgtgtcacc gtaatggcac aggacaaacc
     1081 gactgtcgac atagagctgg ttacaacaac agtcagcaac atggcggagg taagatccta
     1141 ctgctatgag gcatcaatat cagacatggc ttcggacagc cgctgcccaa cacaaggtga
     1201 agcctacctt gacaagcaat cagacactca atatgtctgc aaaagaacgt tagtggacag
     1261 aggctgggga aatggatgtg gactttttgg caaagggagc ctggtgacat gcgctaagtt
     1321 tgcatgctcc aagaaaatga ccgggaagag catccagcca gagaatctgg agtaccggat
     1381 aatgctgtca gttcatggct cccagcacag tgggatgatc gttaatgaca caggacatga
     1441 aactgatgag aatagagcga aagttgagat aacgcccaat tcaccaagag ccgaagccac
     1501 cctggggggt tttggaagcc taggacttga ttgtgaaccg aggacaggcc ttgacttttc
     1561 agatttgtat tacttgacta tgaataacaa gcactggttg gttcacaagg agtggttcca
     1621 cgacattcca ttaccttggc acgctggggc agacaccgga actccacact ggaacaacaa
     1681 agaagcactg gtagagttca aggacgcaca tgccaaaagg caaactgtcg tggttctagg
     1741 gagtcaagaa ggagcagttc acacggccct tgctggagct ctggaggctg agatggatgg
     1801 tgcaaaggga aggctgtcct ctggccactt gaaatgtcgc ctgaaaatgg ataaacttag
     1861 attgaagggc gtgtcatact ccttgtgtac tgcagcgttc acattcacca agatcccggc
     1921 tgaaacactg cacgggacag tcacagtgga ggtacagtac gcagggacag atggaccttg
     1981 caaggttcca gctcagatgg cggtggacat gcaaactctg accccagttg ggaggttgat
     2041 aaccgctaac cccgtaatca ctgaaagcac tgagaactct aagatgatgc tggaacttga
     2101 tccaccattt ggggactctt acattgtcat aggagtcggg gagaagaaga tcacccacca
     2161 ctggcacagg agtggcagca ccattggaaa agcatttgaa gccactgtga gaggtgccaa
     2221 gagaatggca gtcttgggag acacagcctg ggactttgga tcagttggag gcgctctcaa
     2281 ctcattgggc aagggcatcc atcaaatttt tggagcagct ttcaaatcat tgtttggagg
     2341 aatgtcctgg ttctcacaaa ttctcattgg aacgttgctg atgtggttgg gtctgaacac
     2401 aaagaatgga tctatttccc ttatgtgctt ggccttaggg ggggtgttga tcttcttatc
     2461 cacagccgtc tctgctgatg tggggtgctc ggtggacttc tcaaagaagg agacgagatg
     2521 cggtacaggg gtgttcgtct ataacgacgt tgaagcctgg agggacaggt acaagtacca
     2581 tcctgactcc ccccgtagat tggcagcagc agtcaagcaa gcctgggaag atggtatctg
     2641 cgggatctcc tctgtttcaa gaatggaaaa catcatgtgg agatcagtag aaggggagct
     2701 caacgcaatc ctggaagaga atggagttca actgacggtc gttgtgggat ctgtaaaaaa
     2761 ccccatgtgg agaggtccac agagattgcc cgtgcctgtg aacgagctgc cccacggctg
     2821 gaaggcttgg gggaaatcgt acttcgtcag agcagcaaag acaaataaca gctttgtcgt
     2881 ggatggtgac acactgaagg aatgcccact caaacataga gcatggaaca gctttcttgt
     2941 ggaggatcat gggttcgggg tatttcacac tagtgtctgg ctcaaggtta gagaagatta
     3001 ttcattagag tgtgatccag ccgttattgg aacagctgtt aagggaaagg aggctgtaca
     3061 cagtgatcta ggctactgga ttgagagtga gaagaatgac acatggaggc tgaagagggc
     3121 ccatctgatc gagatgaaaa catgtgaatg gccaaagtcc cacacattgt ggacagatgg
     3181 aatagaagag agtgatctga tcatacccaa gtctttagct gggccactca gccatcacaa
     3241 taccagagag ggctacagga cccaaatgaa agggccatgg cacagtgaag agcttgaaat
     3301 tcggtttgag gaatgcccag gcactaaggt ccacgtggag gaaacatgtg gaacaagagg
     3361 accatctctg agatcaacca ctgcaagcgg aagggtgatc gaggaatggt gctgcaggga
     3421 gtgcacaatg cccccactgt cgttccgggc taaagatggc tgttggtatg gaatggagat
     3481 aaggcccagg aaagaaccag aaagcaactt agtaaggtca atggtgactg caggatcaac
     3541 tgatcacatg gaccacttct cccttggagt gcttgtgatc ctgctcatgg tgcaggaagg
     3601 gctgaagaag agaatgacca caaagatcat cataagcaca tcaatggcag tgctggtagc
     3661 tatgatcctg ggaggatttt caatgagtga cctggctaag cttgcaattt tgatgggtgc
     3721 caccttcgcg gaaatgaaca ctggaggaga tgtagctcat ctggcgctga tagcggcatt
     3781 caaagtcaga ccagcgttgc tggtatcttt catcttcaga gctaattgga caccccgtga
     3841 aagcatgctg ctggccttgg cctcgtgtct tttgcaaact gcgatctccg ccttggaagg
     3901 cgacctgatg gttctcatca atggttttgc tttggcctgg ttggcaatac gagcgatggt
     3961 tgttccacgc actgataaca tcaccttggc aatcctggct gctctgacac cactggcccg
     4021 gggcacactg cttgtggcgt ggagagcagg ccttgctact tgcggggggt ttatgctcct
     4081 ctctctgaag ggaaaaggca gtgtgaagaa gaacttacca tttgtcatgg ccctgggact
     4141 aaccgctgtg aggctggtcg accccatcaa cgtggtggga ctgctgttac tcacaaggag
     4201 tgggaagcgg agctggcccc ctagcgaagt actcacagct gttggcctga tatgcgcatt
     4261 ggctggaggg ttcgccaagg cagatataga gatggctggg cccatggccg cggtcggtct
     4321 gctaattgtc agttacgtgg tctcaggaaa gagtgtggac atgtacattg aaagagcagg
     4381 tgacatcaca tgggaaaaag atgcggaagt cactggaaac agtccccggc tcgatgtggc
     4441 gctagatgag agtggtgatt tctccctggt ggaggatgac ggtcccccca tgagagagat
     4501 catactcaag gtggtcctga tgaccatctg tggcatgaat ccaatagcca taccctttgc
     4561 agctggagcg tggtacgtat acgtgaagac tggaaaaagg agtggtgctc tatgggatgt
     4621 gcctgctccc aaggaagtaa aaaaggggga gaccacagat ggagtgtaca gagtaatgac
     4681 tcgtagactg ctaggttcaa cacaagttgg agtgggagtt atgcaagagg gggtctttca
     4741 cactatgtgg cacgtcacaa aaggatccgc gctgagaagc ggtgaaggga gacttgatcc
     4801 atactgggga gatgtcaagc aggatctggt gtcatactgt ggtccatgga agctagatgc
     4861 cgcctgggac gggcacagcg aggtgcagct cttggccgtg ccccccggag agagagcgag
     4921 gaacatccag actctgcccg gaatatttaa gacaaaggat ggggacattg gagcggttgc
     4981 gctggattac ccagcaggaa cttcaggatc tccaatccta gacaagtgtg ggagagtgat
     5041 aggactttat ggcaatgggg tcgtgatcaa aaatgggagt tatgttagtg ccatcaccca
     5101 agggaggagg gaagaagaga ctcctgttga gtgcttcgag ccctcgatgc tgaagaagaa
     5161 gcagctaact gtcttagact tgcatcctgg agctgggaaa accaggagag ttcttcctga
     5221 aatagtccgt gaagccataa aaacaagact ccgtactgtg atcttagctc caaccagggt
     5281 tgtcgctgct gaaatggagg aggcccttag agggcttcca gtgcgttata tgacaacagc
     5341 agtcaatgtc acccactctg gaacagaaat cgtcgactta atgtgccatg ccaccttcac
     5401 ttcacgtcta ctacagccaa tcagagtccc caactataat ctgtatatta tggatgaggc
     5461 ccacttcaca gatccctcaa gtatagcagc aagaggatac atttcaacaa gggttgagat
     5521 gggcgaggcg gctgccatct tcatgaccgc cacgccacca ggaacccgtg acgcatttcc
     5581 ggactccaac tcaccaatta tggacaccga agtggaagtc ccagagagag cctggagctc
     5641 aggctttgat tgggtgacgg atcattctgg aaaaacagtt tggtttgttc caagcgtgag
     5701 gaacggcaat gagatcgcag cttgtctgac aaaggctgga aaacgggtca tacagctcag
     5761 cagaaagact tttgagacag agttccagaa aacaaaacat caagagtggg actttgtcgt
     5821 gacaactgac atttcagaga tgggcgccaa ctttaaagct gaccgtgtca tagattccag
     5881 gagatgccta aagccggtca tacttgatgg cgagagagtc attctggctg gacccatgcc
     5941 tgtcacacat gccagcgctg cccagaggag ggggcgcata ggcaggaatc ccaacaaacc
     6001 tggagatgag tatctgtatg gaggtgggtg cgcagagact gacgaagacc atgcacactg
     6061 gcttgaagca agaatgctcc ttgacaatat ttacctccaa gatggcctca tagcctcgct
     6121 ctatcgacct gaggccgaca aagtagcagc cattgaggga gagttcaagc ttaggacgga
     6181 gcaaaggaag acctttgtgg aactcatgaa aagaggagat cttcctgttt ggctggccta
     6241 tcaggttgca tctgccggaa taacctacac agatagaaga tggtgctttg atggcacgac
     6301 caacaacacc ataatggaag atagtgtgcc ggcagaggtg tggaccagac acggagagaa
     6361 aagagtgctc aaaccgaggt ggatggacgc cagagtttgt tcagatcatg cggccctgaa
     6421 gtcattcaag gagtttgccg ctgggaaaag aggagcggct tttggagtga tggaagccct
     6481 gggaacactg ccaggacaca tgacagagag attccaggaa gccattgaca acctcgctgt
     6541 gctcatgcgg gcagagactg gaagcaggcc ttacaaagcc gcggcggccc aattgccgga
     6601 gaccctagag accataatgc ttttggggtt gctgggaaca gtctcgctgg gaatcttctt
     6661 cgtcttgatg aggaacaagg gcatagggaa gatgggcttt ggaatggtga ctcttggggc
     6721 cagcgcatgg ctcatgtggc tctcggaaat tgagccagcc agaattgcat gtgtcctcat
     6781 tgttgtgttc ctattgctgg tggtgctcat acctgagcca gaaaagcaaa gatctcccca
     6841 ggacaaccaa atggcaatca tcatcatggt agcagtaggt cttctgggct tgattaccgc
     6901 caatgaactc ggatggttgg agagaacaaa gagtgaccta agccatctaa tgggaaggag
     6961 agaggagggg gcaaccatag gattctcaat ggacattgac ctgcggccag cctcagcttg
     7021 ggccatctat gctgccttga caactttcat taccccagcc gtccaacatg cagtgaccac
     7081 ctcatacaac aactactcct taatggcgat ggccacgcaa gctggagtgt tgtttggtat
     7141 gggcaaaggg atgccattct acgcatggga ctttggagtc ccgctgctaa tgataggttg
     7201 ctactcacaa ttaacacccc tgaccctaat agtggccatc attttgctcg tggcgcacta
     7261 catgtacttg atcccagggc tgcaggcagc agctgcgcgt gctgcccaga agagaacggc
     7321 agctggcatc atgaagaacc ctgttgtgga tggaatagtg gtgactgaca ttgacacaat
     7381 gacaattgac ccccaagtgg agaaaaagat gggacaggtg ctactcatag cagtagccgt
     7441 ctccagcgcc atactgtcgc ggaccgcctg ggggtggggg gaggctgggg ccctgatcac
     7501 agccgcaact tccactttgt gggaaggctc tccgaacaag tactggaact cctctacagc
     7561 cacttcactg tgtaacattt ttaggggaag ttacttggct ggagcttctc taatctacac
     7621 agtaacaaga aacgctggct tggtcaagag acgtgggggt ggaacaggag agaccctggg
     7681 agagaaatgg aaggcccgct tgaaccagat gtcggccctg gagttctact cctacaaaaa
     7741 gtcaggcatc accgaggtgt gcagagaaga ggcccgccgc gccctcaagg acggtgtggc
     7801 aacgggaggc catgctgtgt cccgaggaag tgcaaagctg agatggttgg tggagcgggg
     7861 atacctgcag ccctatggaa aggtcattga tcttggatgt ggcagagggg gctggagtta
     7921 ctacgccgcc accatccgca aagttcaaga agtgaaagga tacacaaaag gaggccctgg
     7981 tcatgaagaa cccgtgttgg tgcaaagcta tgggtggaac atagtccgtc ttaagagtgg
     8041 ggtggacgtc tttcatatgg cggctgagcc gtgtgacacg ctgctgtgtg acataggtga
     8101 gtcatcatct agtcctgaag tggaagaagc acggacgctc agagtcctct ccatggtggg
     8161 ggattggctt gaaaaaagac caggagcctt ttgtataaaa gtgttgtgcc catacaccag
     8221 cactatgatg gaaaccctgg agcgactgca gcgtaggtat gggggaggac tggtcagagt
     8281 gccactctcc cgcaactcta cacatgagat gtactgggtc tctggagcga aaagcaacac
     8341 cataaaaagt gtgtccacca cgagccagct cctcttgggg cgcatggacg ggcctaggag
     8401 gccagtgaaa tatgaggagg atgtgaatct cggctctggc acgcgggctg tggtaagctg
     8461 cgctgaagct cccaacatga agatcattgg taaccgcatt gaaaggatcc gcagtgagca
     8521 cgcggaaacg tggttctttg acgagaacca cccatatagg acatgggctt accatggaag
     8581 ctatgaggcc cccacacaag ggtcagcgtc ctctctaata aacggggttg tcaggctcct
     8641 gtcaaaaccc tgggatgtgg tgactggagt cacaggaata gccatgaccg acaccacacc
     8701 gtatggtcag caaagagttt tcaaggaaaa agtggacact agggtgccag acccccaaga
     8761 aggcactcgt caggttatga gcatggtctc ttcctggttg tggaaagagc taggcaaaca
     8821 caaacggcca cgagtctgta ccaaagaaga gttcatcaac aaggttcgta gcaatgcagc
     8881 attaggggca atatttgaag aggaaaaaga gtggaagact gcagtggaag ctgtgaacga
     8941 tccaaggttc tgggctctag tggacaagga aagagagcac cacctgagag gagagtgcca
     9001 gagttgtgtg tataacatga tgggaaaaag agaaaagaaa caaggggaat ttggaaaggc
     9061 caagggcagc cgcgccatct ggtatatgtg gctaggggct agatttctag agttcgaagc
     9121 ccttggattc ttgaacgagg atcactggat ggggagagag aactcaggag gtggtgttga
     9181 agggctggga ttacaaagac tcggatatgt cctagaagag atgagtcgta taccaggagg
     9241 aaggatgtat gcagatgaca ctgctggctg ggacacccgc attagcaggt ttgatctgga
     9301 gaatgaagct ctaatcacca accaaatgga gaaagggcac agggccttgg cattggccat
     9361 aatcaagtac acataccaaa acaaagtggt aaaggtcctt agaccagctg aaaaagggaa
     9421 aacagttatg gacattattt cgagacaaga ccaaaggggg agcggacaag ttgtcactta
     9481 cgctcttaac acatttacca acctagtggt gcaactcatt cggaatatgg aggctgagga
     9541 agttctagag atgcaagact tgtggctgct gcggaggtca gagaaagtga ccaactggtt
     9601 gcagagcaac ggatgggata ggctcaaacg aatggcagtc agtggagatg attgcgttgt
     9661 gaagccaatt gatgataggt ttgcacatgc cctcaggttc ttgaatgata tgggaaaagt
     9721 tagaaaggac acacaagagt ggaaaccctc aactggatgg gacaactggg aagaagttcc
     9781 gttttgctcc caccacttca acaagctcca tctcaaggac gggaggtcca ttgtggttcc
     9841 ctgccgccac caagatgaac tgattggccg ggcccgcgtc tctccagggg cgggatggag
     9901 catccgggag actgcttgcc tagcaaaatc atatgcgcag atgtggcagc tcctttattt
     9961 ccacagaagg gacctccgac tgatggccaa tgccatttgt tcatctgtgc cagttgactg
    10021 ggttccaact gggagaacta cctggtcaat ccatggaaag ggagaatgga tgaccactga
    10081 agacatgctt gtggtgtgga acagagtgtg gattgaggag aacgaccaca tggaagacaa
    10141 gaccccagtt acgaaatgga cagacattcc ctatttggga aaaagggaag acttgtggtg
    10201 tggatctctc atagggcaca gaccgcgcac cacctgggct gagaacatta aaaacacagt
    10261 caacatggtg cgcaggatca taggtgatga agaaaagtac atggactacc tatccaccca
    10321 agttcgctac ttgggtgaag aagggtctac acctggagtg ctgtaagcac caatcttaat
    10381 gttgtcaggc ctgctagtca gccacagctt ggggaaagct gtgcagcctg tgacccccca
    10441 ggagaagctg ggaaaccaag cctatagtca ggccgagaac gccatggcac ggaagaagcc
    10501 atgctgcctg tgagcccctc agaggatact gagtcaaaaa accccacgcg cttggaggcg
    10561 caggatggga aaagaaggtg gcgaccttcc ccacccttca atctggggcc tgaactggag
    10621 atcagctgtg gatccccaga agagggacta gtggttagag gagacccccc ggaaaacgca
    10681 aaacagcata ttgacgctgg gaaagaccag agactccatg agtttcc

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Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
190521905299%0.099%KU321639.1
189851898598%0.099%KJ776791.1
185921859296%0.099%KU312312.1
177391773995%0.098%JN860885.1
176881768894%0.099%KF993678.1
175851758595%0.098%EU545988.1
164061640695%0.095%HQ234499.1
1401514015100%0.089%LC002520.1
1401314013100%0.089%KF268949.1
1400414004100%0.089%KF268948.1
1399713997100%0.089%KF268950.1
1394813948100%0.089%AY632535.2
133081330895%0.089%HQ234498.1
132971329795%0.089%KF383115.1
132861328695%0.089%KF383119.1
132481324895%0.089%KF383116.1
132481324895%0.089%DQ859059.1
132231322395%0.089%HQ234501.1
131871318795%0.088%KF383117.1
131471314795%0.088%HQ234500.1
129721303795%0.088%KF383118.1
128821288293%0.089%KF383121.1
108861088693%0.084%KF383120.1
5081508126%0.099%KU312314.1
5056505626%0.099%KU312313.1
3458345817%0.099%KU312315.1
2861419391%0.071%DQ859064.1
2691269114%0.099%KJ634273.1
173717379%0.099%KM078936.1
173617369%0.099%KM078961.1
173417349%0.099%KM078930.1
173017309%0.099%KM078971.1
173017309%0.099%KM078970.1
173017309%0.099%KM078933.1
172817289%0.099%KM078929.1
158815888%0.099%KJ873160.1
140614067%0.099%KJ873161.1
137313737%0.099%KM851039.1
133713377%0.098%KM851038.1

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LOCUS       KU365779               10662 bp    RNA     linear   VRL 26-JAN-2016
DEFINITION  Zika virus strain BeH819966 polyprotein gene, complete cds.
ACCESSION   KU365779
VERSION     KU365779.1  GI:975885969
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus; Spondweni virus group.
REFERENCE   1  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Genome sequences of four Zika virus isolates from Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2015) Center for Technological Innovation,
            Evandro Chagas Institute, BR 316, Km 07, s/n, Ananindeua, Para
            67030-000, Brazil
COMMENT     EMAIL: bioinformatica@iec.pa.gov.br
            ##Assembly-Data-START##
            Assembly method: Mira 4.0 and Geneious 7.0
            Sequencing Technology: Ion and 454
            ##Assembly-Data-END##.
FEATURES             Location/Qualifiers
     source          1..10662
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /strain="BeH819966"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Brazil"
                     /collection_date="2015"
     CDS             94..10365
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AMA12086.1"
                     /db_xref="GI:975885970"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gtgaatcaga ctgcgacagt tcgagtttga agcgaaagct agcaacagta tcaacaggtt
       61 ttattttgga tttggaaacg agagtttctg gtcatgaaaa acccaaaaaa gaaatccgga
      121 ggattccgga ttgtcaatat gctaaaacgc ggagtagccc gtgtgagccc ctttgggggc
      181 ttgaagaggc tgccagccgg acttctgctg ggtcatgggc ccatcaggat ggtcttggcg
      241 attctagcct ttttgagatt cacggcaatc aagccatcac tgggtctcat caatagatgg
      301 ggttcagtgg ggaaaaaaga ggctatggaa ataataaaga agttcaagaa agatctggct
      361 gccatgctga gaataatcaa tgctaggaag gagaagaaga gacgaggcgc agatactagt
      421 gtcggaattg ttggcctcct gctgaccaca gctatggcag cggaggtcac tagacgtggg
      481 agtgcatact atatgtactt ggacagaaac gatgctgggg aggccatatc ttttccaacc
      541 acattgggga tgaataagtg ttatatacag atcatggatc ttggacacat gtgtgatgcc
      601 accatgagct atgaatgccc tatgctggat gagggggtgg aaccagatga cgtcgattgt
      661 tggtgcaaca cgacgtcaac ttgggttgtg tacggaacct gccatcacaa aaaaggtgaa
      721 gcacggagat ctagaagagc tgtgacgctc ccctcccatt ccactaggaa gctgcaaacg
      781 cggtcgcaaa cctggttgga atcaagagaa tacacaaagc acttgattag agtcgaaaat
      841 tggatattca ggaaccctgg cttcgcgtta gcagcagctg ccatcgcttg gcttttggga
      901 agctcaacga gccaaaaagt catatacttg gtcatgatac tgctgattgc cccggcatac
      961 agcatcaggt gcataggagt cagcaatagg gactttgtgg aaggtatgtc aggtgggacc
     1021 tgggttgatg ttgtcttgga acatggaggt tgtgtcaccg taatggcaca ggacaaaccg
     1081 actgtcgaca tagagctggt tacaacaaca gtcagcaaca tggcggaggt aagatcctac
     1141 tgctatgagg catcaatatc agacatggct tcggacagcc gctgcccaac acaaggtgaa
     1201 gcctaccttg acaagcaatc agacactcaa tatgtctgca aaagaacgtt agtggacaga
     1261 ggctggggaa atggatgtgg actttttggc aaagggagcc tggtgacatg cgctaagttt
     1321 gcatgctcca agaaaatgac cgggaagagc atccagccag agaatctgga gtaccggata
     1381 atgctgtcag ttcatggctc ccagcacagt gggatgattg ttaatgacac aggacatgaa
     1441 actgatgaga atagagcgaa agttgagata acgcccaatt caccaagagc cgaagccacc
     1501 ctggggggtt ttggaagcct aggacttgat tgtgaaccga ggacaggcct tgacttttca
     1561 gatttgtatt acttgactat gaataacaag cactggttgg ttcacaagga gtggttccac
     1621 gacattccat taccttggca cgctggggca gacaccggaa ctccacactg gaacaacaaa
     1681 gaagcactgg tagagttcaa ggacgcacat gccaaaaggc aaactgtcgt ggttctaggg
     1741 agtcaagaag gagcagttca cacggccctt gctggagctc tggaggctga gatggatggt
     1801 gcaaagggaa ggctgtcctc tggccacttg aaatgtcgcc tgaaaatgga taaacttaga
     1861 ttgaagggcg tgtcatactc cttgtgtact gcagcgttca cattcaccaa gatcccggct
     1921 gaaacactgc acgggacagt cacagtggag gtacagtacg cagggacaga tggaccttgc
     1981 aaggttccag ctcagatggc ggtggacatg caaactctga ccccagttgg gaggttgata
     2041 accgctaacc ccgtaatcac tgaaagcact gagaactcta agatgatgct ggaacttgat
     2101 ccaccatttg gggactctta cattgtcata ggagtcgggg agaagaagat cacccaccac
     2161 tggcacagga gtggcagcac cattggaaaa gcatttgaag ccactgtgag aggtgccaag
     2221 agaatggcag tcttgggaga cacagcctgg gactttggat cagttggagg cgctctcaac
     2281 tcattgggca agggcatcca tcaaattttt ggagcagctt tcaaatcatt gtttggagga
     2341 atgtcctggt tctcacaaat tctcattgga acgttgctga tgtggttggg tctgaacaca
     2401 aagaatggat ctatttccct tatgtgcttg gccttagggg gagtgttgat cttcttatcc
     2461 acagccgtct ctgctgatgt ggggtgctcg gtggacttct caaagaagga gacgagatgc
     2521 ggtacagggg tgttcgtcta taacgacgtt gaagcctgga gggacaggta caagtaccat
     2581 cctgactccc cccgtagatt ggcagcagca gtcaagcaag cctgggaaga tggtatctgc
     2641 gggatctcct ctgtttcaag aatggaaaac atcatgtgga gatcagtaga aggggagctc
     2701 aacgcaatcc tggaagagaa tggagttcaa ctgacggtcg ttgtgggatc tgtaaaaaac
     2761 cccatgtgga gaggtccaca gagattgccc gtgcctgtga acgagctgcc ccacggctgg
     2821 aaggcttggg ggaaatcgta cttcgtcaga gcagcaaaga caaataacag ctttgtcgtg
     2881 gatggtgaca cactgaagga atgcccactc aaacatagag catggaacag ctttcttgtg
     2941 gaggatcatg ggttcggggt atttcacact agtgtctggc tcaaggttag agaagattat
     3001 tcattagagt gtgatccagc cgttattgga acagctgtta agggaaagga ggctgtacac
     3061 agtgatctag gctactggat tgagagtgag aagaatgaca catggaggct gaagagggcc
     3121 catctgatcg agatgaaaac atgtgaatgg ccaaagtccc acacattgtg gacagatgga
     3181 atagaagaga gtgatctgat catacccaag tctttagctg ggccactcag ccatcacaat
     3241 accagagagg gctacaggac ccaaatgaaa gggccatggc acagtgaaga gcttgaaatt
     3301 cggtttgagg aatgcccagg cactaaggtc cacgtggagg aaacatgtgg aacaagagga
     3361 ccatctctga gatcaaccac tgcaagcgga agggtgatcg aggaatggtg ctgcagggag
     3421 tgcacaatgc ccccactgtc gttccgggct aaagatggct gttggtatgg aatggagata
     3481 aggcccagga aagaaccaga aagcaactta gtaaggtcaa tggtgactgc aggatcaact
     3541 gatcacatgg accacttctc ccttggagtg cttgtgattc tgctcatggt gcaggaaggg
     3601 ctgaagaaga gaatgaccac aaagatcatc ataagcacat caatggcagt gctggtagct
     3661 atgatcctgg gaggattttc aatgagtgac ctggctaagc ttgcaatttt gatgggtgcc
     3721 accttcgcgg aaatgaacac tggaggagat gtagctcatc tggcgctgat agcggcattc
     3781 aaagtcagac cagcgttgct ggtatctttc atcttcagag ctaattggac accccgtgaa
     3841 agcatgctgc tggccttggc ctcgtgtctt ttgcaaactg cgatctccgc cttggaaggc
     3901 gacctgatgg ttctcatcaa tggttttgct ttggcctggt tggcaatacg agcgatggtt
     3961 gttccacgca ctgataacat caccttggca atcctggctg ctctgacacc actggcccgg
     4021 ggcacactgc ttgtggcgtg gagagcaggc cttgctactt gcggggggtt tatgctcctc
     4081 tctctgaagg gaaaaggcag tgtgaagaag aacttaccat ttgtcatggc cctgggacta
     4141 accgctgtga ggctggtcga ccccatcaac gtggtgggac tgctgttgct cacaaggagt
     4201 gggaagcgga gctggccccc tagcgaagta ctcacagctg ttggcctgat atgcgcattg
     4261 gctggagggt tcgccaaggc agatatagag atggctgggc ccatggccgc ggtcggtctg
     4321 ctaattgtca gttacgtggt ctcaggaaag agtgtggaca tgtacattga aagagcaggt
     4381 gacatcacat gggaaaaaga tgcggaagtc actggaaaca gtccccggct cgatgtggcg
     4441 ctagatgaga gtggtgattt ctccctggtg gaggatgacg gtccccccat gagagagatc
     4501 atactcaagg tggtcctgat gaccatctgt ggcatgaacc caatagccat accctttgca
     4561 gctggagcgt ggtacgtata cgtgaagact ggaaaaagga gtggtgctct atgggatgtg
     4621 cctgctccca aggaagtaaa aaagggggag accacagatg gagtgtacag agtaatgact
     4681 cgtagactgc taggttcaac acaagttgga gtgggagtta tgcaagaggg ggtctttcac
     4741 actatgtggc acgtcacaaa aggatccgcg ctgagaagcg gtgaagggag acttgatcca
     4801 tactggggag atgtcaagca ggatctggtg tcatactgtg gtccatggaa gctagatgcc
     4861 gcctgggacg ggcacagcga ggtgcagctc ttggccgtgc cccccggaga gagagcgagg
     4921 aacatccaga ctctgcccgg aatatttaag acaaaggatg gggacattgg agcggttgcg
     4981 ctggattacc cagcaggaac ttcaggatct ccaatcctag acaagtgtgg gagagtgata
     5041 ggactttatg gcaatggggt cgtgatcaaa aatgggagtt atgttagtgc catcacccaa
     5101 gggaggaggg aggaagagac tcctgttgag tgcttcgagc cttcgatgct gaagaagaag
     5161 cagctaactg tcttagactt gcatcctgga gctgggaaaa ccaggagagt tcttcctgaa
     5221 atagtccgtg aagccataaa aacaagactc cgtactgtga tcttagctcc aaccagggtt
     5281 gtcgctgctg aaatggagga ggcccttaga gggcttccag tgcgttatat gacaacagca
     5341 gtcaatgtca cccactctgg aacagaaatc gtcgacttaa tgtgccatgc caccttcact
     5401 tcacgtctac tacagccaat cagagtcccc aactataatc tgtatattat ggatgaggcc
     5461 cacttcacag atccctcaag tatagcagca agaggataca tttcaacaag ggttgagatg
     5521 ggcgaggcgg ctgccatctt catgaccgcc acgccaccag gaacccgtga cgcatttccg
     5581 gactccaact caccaattat ggacaccgaa gtggaagtcc cagagagagc ctggagctca
     5641 ggctttgatt gggtgacgga tcattctgga aaaacagttt ggtttgttcc aagcgtgagg
     5701 aacggcaatg agatcgcagc ttgtctgaca aaggctggaa aacgggtcat acagctcagc
     5761 agaaagactt ttgagacaga gttccagaaa acaaaacatc aagagtggga ctttgtcgtg
     5821 acaactgaca tttcagagat gggcgccaac tttaaagctg accgtgtcat agattccagg
     5881 agatgcctaa agccggtcat acttgatggc gagagagtca ttctggctgg acccatgcct
     5941 gtcacacatg ccagcgctgc ccagaggagg gggcgcatag gcaggaatcc caacaaacct
     6001 ggagatgagt atctgtatgg aggtgggtgc gcagagactg acgaagacca tgcacactgg
     6061 cttgaagcaa gaatgctcct tgacaatatt tacctccaag atggcctcat agcctcgctc
     6121 tatcgacctg aggccgacaa agtagcagcc attgagggag agttcaagct taggacggag
     6181 caaaggaaga cctttgtgga actcatgaaa agaggagatc ttcctgtttg gctggcctat
     6241 caggttgcat ctgccggaat aacctacaca gatagaagat ggtgctttga tggcacgacc
     6301 aacaacacca taatggaaga cagtgtgccg gcagaggtgt ggaccagaca cggagagaaa
     6361 agagtgctca aaccgaggtg gatggacgcc agagtttgtt cagatcatgc ggccctgaag
     6421 tcattcaagg agtttgccgc tgggaaaaga ggagcggctt ttggagtgat ggaagccctg
     6481 ggaacactgc caggacacat gacagagaga ttccaggaag ccattgacaa cctcgctgtg
     6541 ctcatgcggg cagagactgg aagcaggcct tacaaagccg cggcggccca attgccggag
     6601 accctagaga ccattatgct tttggggttg ctgggaacag tctcgctggg aatcttcttc
     6661 gtcttgatga ggaacaaggg catagggaag atgggctttg gaatggtgac tcttggggcc
     6721 agcgcatggc tcatgtggct ctcggaaatt gagccagcca gaattgcatg tgtcctcatt
     6781 gttgtgtttc tattgctggt ggtgctcata cctgagccag aaaagcaaag atctccccag
     6841 gacaaccaaa tggcaatcat catcatggta gcagtaggtc ttctgggctt gattaccgcc
     6901 aatgaactcg gatggttgga gagaacaaag agtgacctaa gccatctaat gggaaggaga
     6961 gaggaggggg caaccatagg attctcaatg gacattgacc tgcggccagc ctcagcttgg
     7021 gccatctatg ctgccttgac aactttcatt accccagccg tccaacatgc agtgaccact
     7081 tcatacaaca actactcctt aatggcgatg gccacgcaag ctggagtgtt gtttggtatg
     7141 ggcaaaggga tgccattcta cgcatgggac tttggagtcc cgctgctaat gataggttgc
     7201 tactcacaat taacacccct gaccctaata gtggccatca ttttgctcgt ggcgcactac
     7261 atgtacttga tcccagggct gcaggcagca gctgcgcgtg ctgcccagaa gagaacggca
     7321 gctggcatca tgaagaaccc tgttgtggat ggaatagtgg tgactgacat tgacacaatg
     7381 acaattgacc cccaagtgga gaaaaagatg ggacaggtgc tactcatagc agtagccgtc
     7441 tccagcgcca tactgtcgcg gaccgcctgg gggtgggggg aggctggggc cctgatcaca
     7501 gccgcaactt ccactttgtg ggaaggctct ccgaacaagt actggaactc ctctacagcc
     7561 acttcactgt gtaacatttt taggggaagt tacttggctg gagcttctct aatctacaca
     7621 gtaacaagaa acgctggctt ggtcaagaga cgtgggggtg gaacaggaga gaccctggga
     7681 gagaaatgga aggcccgctt gaaccagatg tcggccctgg agttctactc ctacaaaaag
     7741 tcaggcatca ccgaggtgtg cagagaagag gcccgccgcg ccctcaagga cggtgtggca
     7801 acgggaggcc atgctgtgtc ccgaggaagt gcaaagctga gatggttggt ggagcgggga
     7861 tacctgcagc cctatggaaa ggtcattgat cttggatgtg gcagaggggg ctggagttac
     7921 tacgccgcca ccatccgcaa agttcaagaa gtgaaaggat acacaaaagg aggccctggt
     7981 catgaagaac ccgtgttggt gcaaagctat gggtggaaca tagtccgtct taagagtggg
     8041 gtggacgtct ttcatatggc ggctgagccg tgtgacacgt tgctgtgtga cataggtgag
     8101 tcatcatcta gtcctgaagt ggaagaagca cggacgctca gagtcctctc catggtgggg
     8161 gattggcttg aaaaaagacc aggagccttt tgtataaagg tgttgtgccc atacaccagc
     8221 actatgatgg aaaccctgga gcgactgcag cgtaggtatg ggggaggact ggtcagagtg
     8281 ccactctccc gcaactctac acatgagatg tattgggtct ctggagcgaa aagcaacacc
     8341 ataaaaagtg tgtccaccac gagccagctc ctcttggggc gcatggacgg gcctaggagg
     8401 ccagtgaaat atgaggagga tgtgaatctc ggctctggca cgcgggctgt ggtaagctgc
     8461 gctgaagctc ccaacatgaa gatcattggt aaccgcattg aaaggatccg cagtgagcac
     8521 gcggaaacgt ggttctttga cgagaaccac ccatatagga catgggctta ccatggaagc
     8581 tatgaggccc ccacacaagg gtcagcgtcc tctctaataa acggggttgt caggctcctg
     8641 tcaaaaccct gggatgtggt gactggagtc acaggaatag ccatgaccga caccacaccg
     8701 tatggtcagc aaagagtttt caaggaaaaa gtggacacta gggtgccaga cccccaagaa
     8761 ggcactcgtc aggttatgag catggtctct tcctggttgt ggaaagagct aggcaaacac
     8821 aaacggccac gagtctgtac caaagaagag ttcatcaaca aggttcgtag caatgcagca
     8881 ttaggggcaa tatttgaaga ggaaaaagag tggaagactg cagtggaagc tgtgaacgat
     8941 ccaaggttct gggctctagt ggataaggaa agagagcacc acctgagagg agagtgccag
     9001 agttgtgtgt acaacatgat gggaaaaaga gaaaagaaac aaggggaatt tggaaaggcc
     9061 aagggcagcc gcgccatctg gtatatgtgg ctaggggcta gatttctaga gttcgaagcc
     9121 cttggattct tgaacgagga tcactggatg gggagagaga actcaggagg tggtgttgaa
     9181 gggctgggat tacaaagact cggatatgtc ctagaagaga tgagtcgtat accaggagga
     9241 aggatgtatg cagatgacac tgctggctgg gacacccgca tcagcaggtt tgatctggag
     9301 aatgaagctc taatcaccaa ccaaatggaa aaagggcaca gggccttggc attggccata
     9361 atcaagtaca cataccaaaa caaagtggta aaggtcctta gaccagctga aaaagggaaa
     9421 acagttatgg acattatttc gagacaagac caaaggggga gcggacaagt tgtcacttac
     9481 gctcttaaca catttaccaa cctagtggtg caactcattc ggaatatgga ggctgaggaa
     9541 gttctagaga tgcaagactt gtggctgctg cggaggtcag agaaagtgac caactggttg
     9601 cagagcaacg gatgggatag gctcaaacga atggcagtca gtggagatga ttgcgttgtg
     9661 aagccaattg atgataggtt tgcacatgcc ctcaggttct tgaatgatat gggaaaagtt
     9721 aggaaggaca cacaagagtg gaaaccctca actggatggg acaactggga agaagttccg
     9781 ttttgctccc accacttcaa caagctccat ctcaaggacg ggaggtccat tgtggttccc
     9841 tgccgccacc aagatgaact gattggccgg gcccgcgtct ctccaggggc gggatggagc
     9901 atccgggaga ctgcttgcct agcaaaatca tatgcgcaaa tgtggcagct cctttatttc
     9961 cacagaaggg acctccgact gatggccaat gccatttgtt catctgtgcc agttgactgg
    10021 gttccaactg ggagaactac ctggtcaatc catggaaagg gagaatggat gaccactgaa
    10081 gacatgcttg tggtgtggaa cagagtgtgg attgaggaga acgaccacat ggaagacaag
    10141 accccagtta cgaaatggac agacatcccc tatttgggaa aaagggaaga cttgtggtgt
    10201 ggatctctca tagggcacag accgcgcacc acctgggctg agaacattaa aaacacagtc
    10261 aacatggtgc gcaggatcat aggtgatgaa gaaaagtaca tggactacct atccacccaa
    10321 gttcgctact tgggtgaaga agggtctaca cctggagtgc tgtaagcacc agtcttaatg
    10381 ttgtcaggcc tgctagtcag ccacagcttg gggaaagctg tgcagcctgt gaccccccag
    10441 gagaagctgg gaaaccaagc ctatagtcag gccgagaacg ccatggcacg gaagaagcca
    10501 tgctgcctgt gagcccctca gaggacactg agtcaaaaaa ccccacgcgc ttggaggcgc
    10561 aggatgggaa aagaaggtgg cgaccttccc cacccttcaa tctggggcct gaactggaga
    10621 tcagctgtgg atctccagaa gagggactag tggttagagg ag

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
190861908699%0.099%KU321639.1
190211902199%0.099%KJ776791.1
186011860197%0.099%KU312312.1
177661776696%0.098%JN860885.1
177211772195%0.099%KF993678.1
176121761296%0.098%EU545988.1
164691646996%0.096%HQ234499.1
1393413934100%0.089%LC002520.1
1392813928100%0.089%KF268949.1
1391913919100%0.089%KF268948.1
1391213912100%0.089%KF268950.1
1387613876100%0.089%AY632535.2
133391333996%0.089%HQ234498.1
133331333396%0.089%KF383115.1
133171331796%0.089%KF383119.1
132881328896%0.089%DQ859059.1
132751327596%0.089%KF383116.1
132591325996%0.089%HQ234501.1
132091320996%0.088%KF383117.1
131891318996%0.088%HQ234500.1
130031307196%0.088%KF383118.1
129181291893%0.089%KF383121.1
108951089593%0.084%KF383120.1
5081508126%0.099%KU312314.1
5056505626%0.099%KU312313.1
3452345218%0.099%KU312315.1
2856419791%0.071%DQ859064.1
2686268614%0.099%KJ634273.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
159715978%0.099%KJ873160.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134613467%0.098%KM851038.1
Edited by niman

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LOCUS       KU365780               10662 bp    RNA     linear   VRL 26-JAN-2016
DEFINITION  Zika virus strain BeH815744 polyprotein gene, complete cds.
ACCESSION   KU365780
VERSION     KU365780.1  GI:975885971
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus; Spondweni virus group.
REFERENCE   1  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Genome sequences of four Zika virus isolates from Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10662)
  AUTHORS   Azevedo,R.S.S., Cruz,A.C.R., Nunes,B.T.D., Quieroz,A.L.N.,
            Oliveira,R.S., Medeiros,D.B.A., Rodrigues,D.S.G., Silva,E.V.P.,
            Pantoja,J.A.S., Massafra,J.M.V., Santos,M., Silva,S.P., Lemos,P.S.,
            Santos,A.C.M., Vasconcelos,H.B., Lima,J.A., Rodrigues,S.G.,
            Tesh,R.B., Nunes,M.R.T. and Vasconcelos,P.F.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-DEC-2015) Center for Technological Innovation,
            Evandro Chagas Institute, BR 316, Km 07, s/n, Ananindeua, Para
            67030-000, Brazil
COMMENT     EMAIL: bioinformatica@iec.pa.gov.br
            ##Assembly-Data-START##
            Assembly method: Mira 4.0 and Geneious 7.0
            Sequencing Technology: Ion and 454
            ##Assembly-Data-END##.
FEATURES             Location/Qualifiers
     source          1..10662
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /strain="BeH815744"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Brazil"
                     /collection_date="2015"
     CDS             94..10365
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AMA12087.1"
                     /db_xref="GI:975885972"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVDLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gtgaatcaga ctgcgacagt tcgagtttga agcgaaagct agcaacagta tcaacaggtt
       61 ttattttgga tttggaaacg agagtttctg gtcatgaaaa acccaaaaaa gaaatccgga
      121 ggattccgga ttgtcaatat gctaaaacgc ggagtagccc gtgtgagccc ctttgggggc
      181 ttgaagaggc tgccagccgg acttctgctg ggtcatgggc ccatcaggat ggtcttggcg
      241 attctagcct ttttgagatt cacggcaatc aagccatcac tgggtctcat caatagatgg
      301 ggttcagtgg ggaaaaaaga ggctatggaa ataataaaga agttcaagaa agatctggct
      361 gccatgctga gaataatcaa tgctaggaag gagaagaaga gacgaggcgc agatactagt
      421 gtcggaattg ttggcctcct gctgaccaca gctatggcag cggaggtcac tagacgtggg
      481 agtgcatact atatgtactt ggacagaaac gatgctgggg aggccatatc ttttccaacc
      541 acattgggga tgaataagtg ttatatacag atcatggatc ttggacacat gtgtgatgcc
      601 accatgagct atgaatgccc tatgctggat gagggggtgg aaccagatga cgtcgattgt
      661 tggtgcaaca cgacgtcaac ttgggttgtg tacggaacct gccatcacaa aaaaggtgaa
      721 gcacggagat ctagaagagc tgtgacgctc ccctcccatt ccactaggaa gctgcaaacg
      781 cggtcgcaaa cctggttgga atcaagagaa tacacaaagc acttgattag agtcgaaaat
      841 tggatattta ggaaccctgg cttcgcgtta gcagcagctg ccatcgcttg gcttttggga
      901 agctcaacga gccaaaaagt catatacttg gtcatgatac tgctgattgc cccggcatac
      961 agcatcaggt gcataggagt cagcaatagg gactttgtgg aaggtatgtc aggtgggacc
     1021 tgggttgatg ttgtcttgga acatggaggt tgtgtcaccg taatggcaca ggacaaaccg
     1081 actgtcgaca tagagctggt tacaacaaca gtcagcaaca tggcggaggt aagatcctac
     1141 tgctatgagg catcaatatc agacatggct tcggacagcc gctgcccaac acaaggtgaa
     1201 gcctaccttg acaagcaatc agacactcaa tatgtctgca aaagaacgtt agtggacaga
     1261 ggctggggaa atggatgtgg actttttggc aaagggagcc tggtgacatg cgctaagttt
     1321 gcatgctcca agaaaatgac cgggaagagc atccagccag agaatctgga gtaccggata
     1381 atgctgtcag ttcatggctc ccagcacagt gggatgattg ttaatgacac aggacatgaa
     1441 actgatgaga atagagcgaa agttgagata acgcccaatt caccaagagc cgaagccacc
     1501 ctggggggtt ttggaagcct aggacttgat tgtgaaccga ggacaggcct tgacttttca
     1561 gatttgtatt acttgactat gaataacaag cactggttgg ttcacaagga gtggttccac
     1621 gacattccat taccttggca cgctggggca gacaccggaa ctccacactg gaacaacaaa
     1681 gaagcactgg tagagttcaa ggacgcacat gccaaaaggc aaactgtcgt ggttctaggg
     1741 agtcaagaag gagcagttca cacggccctt gctggagctc tggaggctga gatggatggt
     1801 gcaaagggaa ggctgtcctc tggccacttg aaatgtcgcc tgaaaatgga taaacttaga
     1861 ttgaagggcg tgtcatactc cttgtgtact gcagcgttca cattcaccaa gatcccggct
     1921 gaaacactgc acgggacagt cacagtggag gtacagtacg cagggacaga tggaccttgc
     1981 aaggttccag ctcagatggc ggtggacatg caaactctga ccccagttgg gaggttgata
     2041 accgctaacc ccgtaatcac tgaaagcact gagaactcta agatgatgct ggaacttgat
     2101 ccaccatttg gggactctta cattgtcata ggagtcgggg agaagaagat cacccaccac
     2161 tggcacagga gtggcagcac cattggaaaa gcatttgaag ccactgtgag aggtgccaag
     2221 agaatggcag tcttgggaga cacagcctgg gactttggat cagttggagg cgctctcaac
     2281 tcattgggca agggcatcca tcaaattttt ggagcagctt tcaaatcatt gtttggagga
     2341 atgtcctggt tctcacaaat tctcattgga acgttgctga tgtggttggg tctgaacaca
     2401 aagaatggat ctatttccct tatgtgcttg gccttagggg gagtgttgat cttcttatcc
     2461 acagccgtct ctgctgatgt ggggtgctcg gtggacttct caaagaagga gacgagatgc
     2521 ggtacagggg tgttcgtcta taacgacgtt gaagcctgga gggacaggta caagtaccat
     2581 cctgactccc cccgtagatt ggcagcagca gtcaagcaag cctgggaaga tggtatctgc
     2641 gggatctcct ctgtttcaag aatggaaaac atcatgtgga gatcagtaga aggggagctc
     2701 aacgcaatcc tggaagagaa tggagttcaa ctgacggtcg ttgtgggatc tgtaaaaaac
     2761 cccatgtgga gaggtccaca gagattgccc gtgcctgtga acgagctgcc ccacggctgg
     2821 aaggcttggg ggaaatcgta cttcgtcaga gcagcaaaga caaataacag ctttgtcgtg
     2881 gatggtgaca cactgaagga atgcccactc aaacatagag catggaacag ctttcttgtg
     2941 gaggatcatg ggttcggggt atttcacact agtgtctggc tcaaggttag agaagattat
     3001 tcattagagt gtgatccagc cgttattgga acagctgtta agggaaagga ggctgtacac
     3061 agtgatctag gctactggat tgagagtgag aagaatgaca catggaggct gaagagggcc
     3121 catctgatcg agatgaaaac atgtgaatgg ccaaagtccc acacattgtg gacagatgga
     3181 atagaagaga gtgatctgat catacccaag tctttagctg ggccactcag ccatcacaat
     3241 accagagagg gctacaggac ccaaatgaaa gggccatggc acagtgaaga gcttgaaatt
     3301 cggtttgagg aatgcccagg cactaaggtc cacgtggagg aaacatgtgg aacaagagga
     3361 ccatctctga gatcaaccac tgcaagcgga agggtgatcg aggaatggtg ctgcagggag
     3421 tgcacaatgc ccccactgtc gttccgggct aaagatggct gttggtatgg aatggagata
     3481 aggcccagga aagaaccaga aagcaactta gtaaggtcaa tggtgactgc aggatcaact
     3541 gatcacatgg accacttctc ccttggagtg cttgtgattc tgctcatggt gcaggaaggg
     3601 ctgaagaaga gaatgaccac aaagatcatc ataagcacat caatggcagt gctggtagct
     3661 atgatcctgg gaggattttc aatgagtgac ctggctaagc ttgcaatttt gatgggtgcc
     3721 accttcgcgg aaatgaacac tggaggagat gtagctcatc tggcgctgat agcggcattc
     3781 aaagtcagac cagcgttgct ggtatctttc atcttcagag ctaattggac accccgtgaa
     3841 agcatgctgc tggccttggc ctcgtgtctt ttgcaaactg cgatctccgc cttggaaggc
     3901 gacctgatgg ttctcatcaa tggttttgct ttggcctggt tggcaatacg agcgatggtt
     3961 gttccacgca ctgataacat caccttggca atcctggctg ctctgacacc actggcccgg
     4021 ggcacactgc ttgtggcgtg gagagcaggc cttgctactt gcggggggtt tatgctcctc
     4081 tctctgaagg gaaaaggcag tgtgaagaag aacttaccat ttgtcatggc cctgggacta
     4141 accgctgtga ggctggtcga ccccatcaac gtggtgggac tgctgttgct cacaaggagt
     4201 gggaagcgga gctggccccc tagcgaagta ctcacagctg ttggcctgat atgcgcattg
     4261 gctggagggt tcgccaaggc agatatagag atggctgggc ccatggccgc ggtcggtctg
     4321 ctaattgtca gttacgtggt ctcaggaaag agtgtggaca tgtacattga aagagcaggt
     4381 gacatcacat gggaaaaaga tgcggaagtc actggaaaca gtccccggct cgatgtggcg
     4441 ctagatgaga gtggtgattt ctccctggtg gaggatgacg gtccccccat gagagagatc
     4501 atactcaagg tggtcctgat gaccatctgt ggcatgaacc caatagccat accctttgca
     4561 gctggagcgt ggtacgtata cgtgaagact ggaaaaagga gtggtgctct atgggatgtg
     4621 cctgctccca aggaagtaaa aaagggggag accacagatg gagtgtacag agtaatgact
     4681 cgtagactgc taggttcaac acaagttgga gtgggagtta tgcaagaggg ggtctttcac
     4741 actatgtggc acgtcacaaa aggatccgcg ctgagaagcg gtgaagggag acttgatcca
     4801 tactggggag atgtcaagca ggatctggtg tcatactgtg gtccatggaa gctagatgcc
     4861 gcctgggacg ggcacagcga ggtgcagctc ttggccgtgc cccccggaga gagagcgagg
     4921 aacatccaga ctctgcccgg aatatttaag acaaaggatg gggacattgg agcggttgcg
     4981 ctggattacc cagcaggaac ttcaggatct ccaatcctag acaagtgtgg gagagtgata
     5041 ggactttatg gcaatggggt cgtgatcaaa aatgggagtt atgttagtgc catcacccaa
     5101 gggaggaggg aggaagagac tcctgttgag tgcttcgagc cttcgatgct gaagaagaag
     5161 cagctaactg tcttagactt gcatcctgga gctgggaaaa ccaggagagt tcttcctgaa
     5221 atagtccgtg aagccataaa aacaagactc cgcaccgtga tcttagctcc aaccagggtt
     5281 gtcgctgctg aaatggagga ggcccttaga gggcttccag tgcgttatat gacaacagca
     5341 gtcaatgtca cccactctgg aacagaaatc gtcgacttaa tgtgccatgc caccttcact
     5401 tcacgtctac tacagccaat cagagtcccc aactataatc tgtatattat ggatgaggcc
     5461 cacttcacag atccctcaag tatagcagca agaggataca tttcaacaag ggttgagatg
     5521 ggcgaggcgg ctgccatctt catgaccgcc acgccaccag gaacccgtga cgcatttccg
     5581 gactccaact caccaattat ggacaccgaa gtggaagtcc cagagagagc ctggagctca
     5641 ggctttgatt gggtgacgga tcattctgga aaaacagttt ggtttgttcc aagcgtgagg
     5701 aacggcaatg agatcgcagc ttgtctgaca aaggctggaa aacgggtcat acagctcagc
     5761 agaaagactt ttgagacaga gttccagaaa acaaaacatc aagagtggga ctttgtcgtg
     5821 acaactgaca tttcagagat gggcgccaac tttaaagctg accgtgtcat agattccagg
     5881 agatgcctaa agccggtcat acttgatggc gagagagtca ttctggctgg acccatgcct
     5941 gtcacacatg ccagcgctgc ccagaggagg gggcgcatag gcaggaatcc caacaaacct
     6001 ggagatgagt atctgtatgg aggtgggtgc gcagagactg acgaagacca tgcacactgg
     6061 cttgaagcaa gaatgctcct tgacaatatt tacctccaag atggcctcat agcctcgctc
     6121 tatcgacctg aggccgacaa agtagcagcc attgagggag agttcaagct taggacggag
     6181 caaaggaaga cctttgtgga actcatgaaa agaggagatc ttcctgtttg gctggcctat
     6241 caggttgcat ctgccggaat aacctacaca gatagaagat ggtgctttga tggcacgacc
     6301 aacaacacca taatggaaga cagtgtgccg gcagaggtgt ggaccagaca cggagagaaa
     6361 agagtgctca aaccgaggtg gatggacgcc agagtttgtt cagatcatgc ggccctgaag
     6421 tcattcaagg agtttgccgc tgggaaaaga ggagcggctt ttggagtgat ggaagccctg
     6481 ggaacactgc caggacacat gacagagaga ttccaggaag ccattgacaa cctcgctgtg
     6541 ctcatgcggg cagagactgg aagcaggcct tacaaagccg cggcggccca attgccggag
     6601 accctagaga ccattatgct tttggggttg ctgggaacag tctcgctggg aatcttcttc
     6661 gtcttgatga ggaacaaggg catagggaag atgggctttg gaatggtgac tcttggggcc
     6721 agcgcatggc tcatgtggct ctcggaaatt gagccagcca gaattgcatg tgtcctcatt
     6781 gttgtgtttc tattgctggt ggtgctcata cctgagccag aaaagcaaag atctccccag
     6841 gacaaccaaa tggcaatcat catcatggta gcagtaggtc ttctgggctt gattaccgcc
     6901 aatgaactcg gatggttgga gagaacaaag agtgacctaa gccatctaat gggaaggaga
     6961 gaggaggggg caaccatagg attctcaatg gacattgacc tgcggccagc ctcagcttgg
     7021 gccatctatg ctgccttgac aactttcatt accccagccg tccaacatgc agtgaccact
     7081 tcatacaaca actactcctt aatggcgatg gccacgcaag ctggagtgtt gtttggtatg
     7141 ggcaaaggga tgccattcta cgcatgggac tttggagtcc cgctgctaat gataggttgc
     7201 tactcacaat taacacccct gaccctaata gtggccatca ttttgctcgt ggcgcactac
     7261 atgtacttga tcccagggct gcaggcagca gctgcgcgtg ctgcccagaa gagaacggca
     7321 gctggcatca tgaagaaccc tgttgtggat ggaatagtgg tgactgacat tgacacaatg
     7381 acaattgacc cccaagtgga gaaaaagatg ggacaggtgc tactcatagc agtagccgtc
     7441 tccagcgcca tactgtcgcg gaccgcctgg gggtgggggg aggctggggc cctgatcaca
     7501 gccgcaactt ccactttgtg ggaaggctct ccgaacaagt actggaactc ctctacagcc
     7561 acttcactgt gtaacatttt taggggaagt tacttggctg gagcttctct aatctacaca
     7621 gtaacaagaa acgctggctt ggtcaagaga cgtgggggtg gaacaggaga gaccctggga
     7681 gagaaatgga aggcccgctt gaaccagatg tcggccctgg agttctactc ctacaaaaag
     7741 tcaggcatca ccgaggtgtg cagagaagag gcccgccgcg ccctcaagga cggtgtggca
     7801 acgggaggcc atgctgtgtc ccgaggaagt gcaaagctga gatggttggt ggagcgggga
     7861 tacctgcagc cctatggaaa ggtcattgat cttggatgtg gcagaggggg ctggagttac
     7921 tacgccgcca ccatccgcaa agttcaagaa gtgaaaggat acacaaaagg aggccctggt
     7981 catgaagaac ccgtgttggt gcaaagctat gggtggaaca tagtccgtct taagagtggg
     8041 gtggacgtct ttcatatggc ggctgagccg tgtgacacgt tgctgtgtga cataggtgag
     8101 tcatcatcta gtcctgaagt ggaagaagca cggacgctca gagtcctctc catggtgggg
     8161 gattggcttg aaaaaagacc aggagccttt tgtataaagg tgttgtgccc atacaccagc
     8221 actatgatgg aaaccctgga gcgactgcag cgtaggtatg ggggaggact ggtcagagtg
     8281 ccactctccc gcaactctac acatgagatg tattgggtct ctggagcgaa aagcaacacc
     8341 ataaaaagtg tgtccaccac gagccagctc ctcttggggc gcatggacgg gcctaggagg
     8401 ccagtgaaat atgaggagga tgtggatctc ggctctggca cgcgggctgt ggtaagctgc
     8461 gctgaagctc ccaacatgaa gatcattggt aaccgcattg aaaggatccg cagtgagcac
     8521 gcggaaacgt ggttctttga cgagaaccac ccatatagga catgggctta ccatggaagc
     8581 tatgaggccc ccacacaagg gtcagcgtcc tctctaataa acggggttgt caggctcctg
     8641 tcaaaaccct gggatgtggt gactggagtc acaggaatag ccatgaccga caccacaccg
     8701 tatggtcagc aaagagtttt caaggaaaaa gtggacacta gggtgccaga cccccaagaa
     8761 ggcactcgtc aggttatgag catggtctct tcctggttgt ggaaagagct aggcaaacac
     8821 aaacggccac gagtctgtac caaagaagag ttcatcaaca aggttcgtag caatgcagca
     8881 ttaggggcaa tatttgaaga ggaaaaagag tggaagactg cagtggaagc tgtgaacgat
     8941 ccaaggttct gggctctagt ggataaggaa agagagcacc acctgagagg agagtgccag
     9001 agttgtgtgt acaacatgat gggaaaaaga gaaaagaaac aaggggaatt tggaaaggcc
     9061 aagggcagcc gcgccatctg gtatatgtgg ctaggggcta gatttctaga gttcgaagcc
     9121 cttggattct tgaacgagga tcactggatg gggagagaga actcaggagg tggtgttgaa
     9181 gggctgggat tacaaagact cggatatgtc ctagaagaga tgagtcgtat accaggagga
     9241 aggatgtatg cagatgacac tgctggctgg gacacccgca tcagcaggtt tgatctggag
     9301 aatgaagctc taatcaccaa ccaaatggaa aaagggcaca gggccttggc attggccata
     9361 atcaagtaca cataccaaaa caaagtggta aaggtcctta gaccagctga aaaagggaaa
     9421 acagttatgg acattatttc gagacaagac caaaggggga gcggacaagt tgtcacttac
     9481 gctcttaaca catttaccaa cctagtggtg caactcattc ggaatatgga ggctgaggaa
     9541 gttctagaga tgcaagactt gtggctgctg cggaggtcag agaaagtgac caactggttg
     9601 cagagcaacg gatgggatag gctcaaacga atggcagtca gtggagatga ttgcgttgtg
     9661 aagccaattg atgataggtt tgcacatgcc ctcaggttct tgaatgatat gggaaaagtt
     9721 aggaaggaca cacaagagtg gaaaccctca actggatggg acaactggga agaagttccg
     9781 ttttgctccc accacttcaa caagctccat ctcaaggacg ggaggtccat tgtggttccc
     9841 tgccgccacc aagatgaact gattggccgg gcccgcgtct ctccaggggc gggatggagc
     9901 atccgggaga ctgcttgcct agcaaaatca tatgcgcaaa tgtggcagct cctttatttc
     9961 cacagaaggg acctccgact gatggccaat gccatttgtt catctgtgcc agttgactgg
    10021 gttccaactg ggagaactac ctggtcaatc catggaaagg gagaatggat gaccactgaa
    10081 gacatgcttg tggtgtggaa cagagtgtgg attgaggaga acgaccacat ggaagacaag
    10141 accccagtta cgaaatggac agacattccc tatttgggaa aaagggaaga cttgtggtgt
    10201 ggatctctca tagggcacag accgcgcacc acctgggctg agaacattaa aaacacagtc
    10261 aacatggtgc gcaggatcat aggtgatgaa gaaaagtaca tggactacct atccacccaa
    10321 gttcgctact tgggtgaaga agggtctaca cctggagtgc tgtaagcacc aatcttaatg
    10381 ttgtcaggcc tgctagtcag ccacagcttg gggaaagctg tgcagcctgt gaccccccag
    10441 gagaagctgg gaaaccaagc ctatagtcag gccgagaacg ccatggcacg gaagaagcca
    10501 tgctgcctgt gagcccctca gaggacactg agtcaaaaaa ccccacgcgc ttggaggcgc
    10561 aggatgggaa aagaaggtgg cgaccttccc cacccttcaa tctggggcct gaactggaga
    10621 tcagctgtgg atctccagaa gagggactag tggttagagg ag

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
190771907799%0.099%KU321639.1
190121901299%0.099%KJ776791.1
185921859297%0.099%KU312312.1
177621776296%0.098%JN860885.1
177061770695%0.099%KF993678.1
175981759896%0.098%EU545988.1
164691646996%0.096%HQ234499.1
1393413934100%0.089%LC002520.1
1392313923100%0.089%KF268949.1
1392313923100%0.089%KF268948.1
1391613916100%0.089%KF268950.1
1387613876100%0.089%AY632535.2
133351333596%0.089%HQ234498.1
133331333396%0.089%KF383115.1
133131331396%0.089%KF383119.1
132881328896%0.089%DQ859059.1
132751327596%0.089%KF383116.1
132681326896%0.089%HQ234501.1
132051320596%0.088%KF383117.1
131891318996%0.088%HQ234500.1
129991306796%0.088%KF383118.1
129091290993%0.089%KF383121.1
108861088693%0.084%KF383120.1
5077507726%0.099%KU312314.1
5052505226%0.099%KU312313.1
3452345218%0.099%KU312315.1
2861419791%0.071%DQ859064.1
2686268614%0.099%KJ634273.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
159715978%0.099%KJ873160.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134613467%0.098%KM851038.1
130613069%0.088%AF013415.1
123612366%0.099%KT200609.1

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1922819228100%0.0100%KU365777.1
1921919219100%0.099%KU365780.1
1921019210100%0.099%KU365779.1
1909319093100%0.099%KU365778.1
190681906899%0.099%KU321639.1
190031900399%0.099%KJ776791.1
185831858397%0.099%KU312312.1
177571775796%0.098%JN860885.1
177031770395%0.099%KF993678.1
175941759496%0.098%EU545988.1

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1922819228100%0.0100%KU365780.1
1921919219100%0.099%KU365777.1
1920119201100%0.099%KU365779.1
1910219102100%0.099%KU365778.1
190771907799%0.099%KU321639.1
190121901299%0.099%KJ776791.1
185921859297%0.099%KU312312.1
177621776296%0.098%JN860885.1
177061770695%0.099%KF993678.1
175981759896%0.098%EU545988.1
164691646996%0.096%HQ234499.1
1393413934100%0.089%LC002520.1
1392313923100%0.089%KF268949.1
1392313923100%0.089%KF268948.1
1391613916100%0.089%KF268950.1
1387613876100%0.089%AY632535.2
133351333596%0.089%HQ234498.1
133331333396%0.089%KF383115.1
133131331396%0.089%KF383119.1
132881328896%0.089%DQ859059.1
132751327596%0.089%KF383116.1
132681326896%0.089%HQ234501.1
132051320596%0.088%KF383117.1
131891318996%0.088%HQ234500.1
129991306796%0.088%KF383118.1
129091290993%0.089%KF383121.1
108861088693%0.084%KF383120.1
5077507726%0.099%KU312314.1
5052505226%0.099%KU312313.1
3452345218%0.099%KU312315.1
2861419791%0.071%DQ859064.1
2686268614%0.099%KJ634273.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
159715978%0.099%KJ873160.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134613467%0.098%KM851038.1

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1922819228100%0.0100%KU365779.1
1921019210100%0.099%KU365777.1
1920119201100%0.099%KU365780.1
1911119111100%0.099%KU365778.1
190861908699%0.099%KU321639.1
190211902199%0.099%KJ776791.1
186011860197%0.099%KU312312.1
177661776696%0.098%JN860885.1
177211772195%0.099%KF993678.1
176121761296%0.098%EU545988.1
164691646996%0.096%HQ234499.1
1393413934100%0.089%LC002520.1
1392813928100%0.089%KF268949.1
1391913919100%0.089%KF268948.1
1391213912100%0.089%KF268950.1
1387613876100%0.089%AY632535.2
133391333996%0.089%HQ234498.1
133331333396%0.089%KF383115.1
133171331796%0.089%KF383119.1
132881328896%0.089%DQ859059.1
132751327596%0.089%KF383116.1
132591325996%0.089%HQ234501.1
132091320996%0.088%KF383117.1
131891318996%0.088%HQ234500.1
130031307196%0.088%KF383118.1
129181291893%0.089%KF383121.1
108951089593%0.084%KF383120.1
5081508126%0.099%KU312314.1
5056505626%0.099%KU312313.1
3452345218%0.099%KU312315.1
2856419791%0.071%DQ859064.1
2686268614%0.099%KJ634273.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
159715978%0.099%KJ873160.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134613467%0.098%KM851038.1

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Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1934619346100%0.0100%KU365778.1
191111911199%0.099%KU365779.1
191021910299%0.099%KU365780.1
190931909399%0.099%KU365777.1
190521905299%0.099%KU321639.1
189851898598%0.099%KJ776791.1
185921859296%0.099%KU312312.1
177391773995%0.098%JN860885.1
176881768894%0.099%KF993678.1
175851758595%0.098%EU545988.1
164061640695%0.095%HQ234499.1
1401514015100%0.089%LC002520.1
1401314013100%0.089%KF268949.1
1400414004100%0.089%KF268948.1
1399713997100%0.089%KF268950.1
1394813948100%0.089%AY632535.2
133081330895%0.089%HQ234498.1
132971329795%0.089%KF383115.1
132861328695%0.089%KF383119.1
132481324895%0.089%KF383116.1
132481324895%0.089%DQ859059.1
132231322395%0.089%HQ234501.1
131871318795%0.088%KF383117.1
131471314795%0.088%HQ234500.1
129721303795%0.088%KF383118.1
128821288293%0.089%KF383121.1
108861088693%0.084%KF383120.1
5081508126%0.099%KU312314.1
5056505626%0.099%KU312313.1
3458345817%0.099%KU312315.1
2861419391%0.071%DQ859064.1
2691269114%0.099%KJ634273.1
173717379%0.099%KM078936.1
173617369%0.099%KM078961.1
173417349%0.099%KM078930.1
173017309%0.099%KM078971.1
173017309%0.099%KM078970.1
173017309%0.099%KM078933.1
172817289%0.099%