niman Posted January 26, 2018 Author Report Share Posted January 26, 2018 Descriptions Align Segment-ID Name Score E-Value Identity EPI1144332 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI1123259 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI1119860 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI1144340 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1123235 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1119868 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI1144348 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 2 (PB1) 4180.1 0.000000e+00 2271/2275 (99%) EPI1131094 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI1123243 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI1139712 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI1131086 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI909458 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI909450 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI961447 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI1117251 A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019844 A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019836 A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019788 A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019780 A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019724 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019716 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019708 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019692 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019684 A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019652 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019628 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019596 A/Eur_Wig/NL-Terschelling/16015692-010/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019532 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019460 A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019396 A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019388 A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019380 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019372 A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI1019364 A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI956130 A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI954581 A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI922322 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI860495 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI860390 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI967462 A/domestic duck/Germany-MV/R9764/2016 (A/H5N8) segment 2 (PB1) 4058.2 0.000000e+00 2248/2274 (98%) EPI1044546 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019876 A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019868 A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019860 A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019852 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019828 A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019820 A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019812 A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019804 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019796 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019772 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019756 A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019668 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019660 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019612 A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019572 A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019564 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019540 A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019500 A/Eur_Wig/NL-Akkrum/16015817-003/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019484 A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019468 A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019452 A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019420 A/Ch/NL-Hiaure/16016112-001-005/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019412 A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI969252 A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI959329 A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI954781 A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909362 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI885204 A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI881281 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI881276 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI860398 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI859659 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI1019764 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019748 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019700 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019556 A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI1019524 A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI962063 A/Turkey/Hungary/53136/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI954811 A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI954661 A/Goose/Hungary/1030/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI931205 A/chicken/Germany-MV/R10048/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI909426 A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI859205 A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4047.1 0.000000e+00 2246/2274 (98%) EPI1122891 A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1122875 A/chicken/Greece/39_2017/2017 (A/H5N6) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1032482 A/Goose/Hungary/15729/2017 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019740 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019732 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019644 A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019548 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019516 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1019444 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1007673 A/peacock/Belgium/1017/2017 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI1007665 A/chicken/Belgium/807/2017 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI954875 A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI954867 A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 26, 2018 Author Report Share Posted January 26, 2018 Descriptions Align Segment-ID Name Score E-Value Identity EPI1144333 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI1123257 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1123241 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1119869 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI1144349 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI1123233 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI1119861 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI1144341 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI1139713 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI1131095 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI1019770 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019722 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019706 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019650 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019562 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019442 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019378 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI1019746 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI1019690 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI1019666 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI1019658 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI1044547 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI1019802 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI1019794 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI1019738 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI965226 A/black-tailed godwit/Bangladesh/24734/2015 (A/H7N5) segment 3 (PA) 3733.2 0.000000e+00 2108/2152 (97%) EPI926008 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI926000 A/mallard/Chany/355/2016 (A/H1N1) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI925992 A/gadwall/Chany/315/2016 (A/H1N1) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI925984 A/mallard/Chany/313/2016 (A/H1N1) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI965379 A/duck/Bangladesh/24697/2015 (A/H15N9) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI965278 A/duck/Bangladesh/24704/2015 (A/H15N9) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI965237 A/duck/Bangladesh/25891/2015 (A/H4N6) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI963325 A/duck/Bangladesh/24035/2014 (A/H10N1) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI965322 A/duck/Bangladesh/26918/2015 (A/H3N6) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI884265 A/mallard/Chany/126K-2/2014 (A/H8N4) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3674.1 0.000000e+00 2100/2154 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3674.1 0.000000e+00 2100/2154 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3674.1 0.000000e+00 2100/2154 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3672.3 0.000000e+00 2080/2126 (97%) EPI1006647 A/Anseriformes/Anhui/L25/2014 (A/H1N1) segment 3 (PA) 3668.6 0.000000e+00 2098/2153 (97%) EPI965541 A/duck/Bangladesh/27042/2015 (A/H7N9) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI965406 A/duck/Bangladesh/26980/2015 (A/H7N9) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI925976 A/pintail/Chany/198/2016 (A/H3N8) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI925960 A/teal/Chany/135/2016 (A/H3N8) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3668.6 0.000000e+00 2099/2154 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3668.6 0.000000e+00 2099/2154 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3668.6 0.000000e+00 2099/2154 (97%) EPI969334 A/wild bird/Korea/SK14/2014 (A/H1N1) segment 3 (PA) 3663.0 0.000000e+00 2097/2153 (97%) EPI965516 A/duck/Bangladesh/26992/2015 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI942184 A/duck/Hubei/ZYSYG15/2015 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI942183 A/duck/Hubei/ZYSYG14/2015 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI942182 A/duck/Hubei/ZYSYG1/2015 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI925968 A/mallard/Chany/185/2016 (A/H3N8) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2098/2154 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2098/2154 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3663.0 0.000000e+00 2097/2153 (97%) EPI1006604 A/Anseriformes/Anhui/S3/2014 (A/H1N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI895321 A/Anser fabalis/China/Anhui/L144/2014 (A/H6N1) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI895305 A/Anser fabalis/China/Anhui/L63/2014 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI895297 A/Anser fabalis/China/Anhui/L9/2014 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2096/2153 (97%) EPI895281 A/Anser fabalis/China/Anhui/S104/2014 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2097/2154 (97%) EPI895265 A/Anser fabalis/China/Anhui/S45/2014 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2097/2154 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3657.5 0.000000e+00 2077/2125 (97%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI1006661 A/Anseriformes/Anhui/L259/2014 (A/H1N1) segment 3 (PA) 3651.9 0.000000e+00 2096/2154 (97%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3651.9 0.000000e+00 2096/2154 (97%) EPI1014810 A/mallard duck/Netherlands/20/2012 (A/H1N1) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI1006618 A/Anseriformes/Anhui/S107/2014 (A/H1N1) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI890476 A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI890244 A/mallard duck/Netherlands/37/2011 (A/H1N1) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI889662 A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI1006654 A/Anseriformes/Anhui/L167/2014 (A/H1N1) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI895289 A/Anser fabalis/China/Anhui/S148/2014 (A/H6N2) segment 3 (PA) 3640.9 0.000000e+00 2094/2154 (97%) EPI890932 A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA) 3640.9 0.000000e+00 2093/2153 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3639.0 0.000000e+00 2075/2127 (97%) EPI1014040 A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 3 (PA) 3635.3 0.000000e+00 2092/2153 (97%) Link to comment Share on other sites More sharing options...
niman Posted January 26, 2018 Author Report Share Posted January 26, 2018 Descriptions Align Segment-ID Name Score E-Value Identity EPI1144343 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1144335 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1131097 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1123238 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI1144351 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1139715 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1123254 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1123230 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1119871 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1119863 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI1131089 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 5 (NP) 2743.4 0.000000e+00 1493/1497 (99%) EPI961450 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI909453 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI1117254 A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1044548 A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019791 A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019783 A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019775 A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019767 A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019759 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019751 A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019743 A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019695 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019687 A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019679 A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019663 A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019655 A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019647 A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019479 A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019407 A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019383 A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019367 A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI909461 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI1019839 A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019831 A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019799 A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019735 A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019719 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019703 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019623 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019615 A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019607 A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019599 A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019559 A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019543 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019527 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019511 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019503 A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019487 A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019471 A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI1019375 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI954870 A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI954854 A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI954776 A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI942936 A/turkey/England/003778/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909421 A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909413 A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909405 A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909397 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909389 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI909381 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI906264 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2712.0 0.000000e+00 1487/1497 (99%) EPI1040234 A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019863 A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%) EPI1019855 A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%) EPI1019847 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019727 A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019711 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019671 A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019639 A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019631 A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019575 A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019567 A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019463 A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019455 A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019447 A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019439 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019431 A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019423 A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019399 A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019391 A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI1019359 A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI990779 A/mute swan/Germany-NI/AR1529-L02145/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI990763 A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI988592 A/turkey/Germany-NI/R9807/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI959332 A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954752 A/Peregrine_falcon/Hungary/4882/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954600 A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954576 A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI954568 A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI942944 A/chicken/Wales/000023/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909437 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI909365 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI906263 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI888670 A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) Link to comment Share on other sites More sharing options...
niman Posted January 26, 2018 Author Report Share Posted January 26, 2018 Descriptions Align Segment-ID Name Score E-Value Identity EPI1144338 A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 8 (NS) 1554.2 0.000000e+00 841/841 (100%) EPI1144346 A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 840/841 (99%) EPI1131100 A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 8 (NS) 1544.9 0.000000e+00 838/839 (99%) EPI1123231 A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 8 (NS) 1544.9 0.000000e+00 838/839 (99%) EPI1119874 A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 8 (NS) 1544.9 0.000000e+00 838/839 (99%) EPI1119866 A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 8 (NS) 1544.9 0.000000e+00 838/839 (99%) EPI1144354 A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 8 (NS) 1539.4 0.000000e+00 838/841 (99%) EPI1123255 A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 8 (NS) 1539.4 0.000000e+00 837/839 (99%) EPI1123239 A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 8 (NS) 1539.4 0.000000e+00 837/839 (99%) EPI1139718 A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 8 (NS) 1528.3 0.000000e+00 835/839 (99%) EPI1131092 A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 8 (NS) 1517.2 0.000000e+00 833/839 (99%) EPI866979 A/duck/Hungary/60441/2016 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 822/839 (97%) EPI1081973 A/goose/Italy/17VIR6358-3/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1081921 A/swan/Italy/17VIR7064-1/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032556 A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032542 A/Goose/Hungary/64909/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032534 A/Goose/Hungary/63743/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032526 A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032518 A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032510 A/Goose/Hungary/59763/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032502 A/Goose/Hungary/17985/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032494 A/Goose/Hungary/17580/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032486 A/Goose/Hungary/17051/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1032470 A/Goose/Hungary/17261/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI962038 A/Duck/Hungary/54738/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI959557 A/Rook/Hungary/4975/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI959533 A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI956131 A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954863 A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954831 A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954815 A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954729 A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954721 A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954673 A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI954633 A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI866975 A/chicken/Hungary/59048/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI860533 A/duck/Hungary/55191/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI860520 A/goose/Hungary/55128/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI860517 A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 821/839 (97%) EPI1019848 A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019824 A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019816 A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019808 A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019760 A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019720 A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019712 A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019704 A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019696 A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019624 A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019528 A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019440 A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI1019376 A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI969258 A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 822/841 (97%) EPI961494 A/shelduck/Italy/17VIR1572-24/2017 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 820/838 (97%) EPI954601 A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 820/838 (97%) EPI954577 A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 820/838 (97%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 820/838 (97%) EPI1126358 A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1093385 A/mute swan/Czech Republic/1058-17/2017 (H5N8) (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1085346 A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1081898 A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1081886 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1045979 A/unknown/Tatarstan/94/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1045621 A/chicken/Tatarstan/88/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1045599 A/chicken/Shchyolkovo/47/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1032478 A/Goose/Hungary/15729/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019616 A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019600 A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019576 A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019544 A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019512 A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019504 A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1019432 A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI1007679 A/peacock/Belgium/1017/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI962059 A/Turkey/Hungary/53136/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI962048 A/Duck/Hungary/55764/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI961471 A/chicken/Sergiyev Posad/39/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI961463 A/chicken/Sergiyev Posad/38/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI961453 A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI956122 A/Goose/Hungary/59712/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI954839 A/Mallard/Hungary/5821/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI954823 A/Chicken/Hungary/1751/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI954745 A/Chicken/Hungary/2496/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI954713 A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI954705 A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI953757 A/mallard/Hungary/57857/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) EPI859211 A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 820/839 (97%) Link to comment Share on other sites More sharing options...
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