Egypt 2015 H5N1 Case Matches Prior Human Sequences

niman · September 8, 2015

Egypt MoH provides Mill Hill 2015 sample from 10M.

Edited September 8, 2015 by niman

niman · September 8, 2015

Isolate detail

Isolate name:

A/Egypt/682/2015

Isolate ID:

EPI_ISL_195659

Passage details/history:

E1

Type:

A / H5N1

Lineage:

Sample information

Collection date:

2015-01-15

Host

Human

Additional host information:

Zip code:

Patient status:

Last vaccinated:

In-vivo pathogenicity test:

Location:

Egypt

Additional location information:

Patient age:

10 Year(s)

Gender:

Male

Outbreak:

Treatment:

Specimen source:

Institute information

Originating lab:

Ministry of Health and Population

Sample ID given by the sample provider:

Address:

Ministry of Health and Population
Central Health Laboratories
19 Sheikh Reehan Street - Abdeen 
 Cairo
Egypt

Submitting lab:

National Institute for Medical Research

Sample ID given by the submitting laboratory:

Authors:

Address:

National Institute for Medical Research
 The Ridgeway, Mill Hill
London,  NW7 1AA
United Kingdom

Publication

In vivo antiviral resistance

Antiviral resistance tested by experimental procedures

Adamantanes:

Unknown

Oseltamivir:

Unknown

Zanamivir:

Unknown

Peramivir:

Unknown

Other:

Unknown

Additional information

Antigenic characterization:

Note:

Sequence

segment	identifier	length	accession #
PB2	A/Egypt/682/2015	2280	EPI642544
PB1	A/Egypt/682/2015	2274	EPI642543
PA	A/Egypt/682/2015	2151	EPI642542
HA	A/Egypt/682/2015	1704	EPI642537
NP	A/Egypt/682/2015	1497	EPI642540
NA	A/Egypt/682/2015	1350	EPI642538
MP	A/Egypt/682/2015	982	EPI642539
NS	A/Egypt/682/2015	823	EPI642541

Submitter information

Submitter:

Ermetal, Burcu

Submission Date:

2015-09-08

Last modifier:

Ermetal, Burcu

Last modified:

2015-09-08

Address:

National Institute for Medical Research
 The Ridgeway, Mill Hill
London,  NW7 1AA
United Kingdom

Address:

National Institute for Medical Research
 The Ridgeway, Mill Hill
London,  NW7 1AA
United Kingdom

Edited September 8, 2015 by niman

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642537	A/Egypt/682/2015 (A/H5N1) segment 4 (HA)	3147.8	0.000000e+00	1704/1704 (100%)
EPI579006	A/chicken/Egypt/CLEVB-1_N00215/2014 (A/H5N1) segment 4 (HA)	3122.0	0.000000e+00	1699/1704 (99%)
EPI573252	A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 4 (HA)	3120.1	0.000000e+00	1697/1701 (99%)
EPI579784	A/chicken/Egypt/CLEVB-18_N00232/2015 (A/H5N1) segment 4 (HA)	3114.6	0.000000e+00	1698/1704 (99%)
EPI574132	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 4 (HA)	3114.6	0.000000e+00	1698/1704 (99%)
EPI573248	A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 4 (HA)	3110.9	0.000000e+00	1694/1699 (99%)
EPI573260	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 4 (HA)	3103.5	0.000000e+00	1694/1701 (99%)
EPI584778	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 4 (HA)	3098.0	0.000000e+00	1695/1704 (99%)
EPI574125	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 4 (HA)	3098.0	0.000000e+00	1695/1704 (99%)
EPI573246	A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 4 (HA)	3092.4	0.000000e+00	1692/1701 (99%)
EPI579781	A/duck/Egypt/CLEVB-25_N00239/2015 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI579780	A/duck/Egypt/CLEVB-24_N00238/2015 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI579520	A/chicken/Egypt/CLEVB-17_N00231/2015 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI579325	A/chicken/Egypt/CLEVB-16_N00230/2014 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI579324	A/chicken/Egypt/CLEVB-19_N00233/2015 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI573244	A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI579783	A/chicken/Egypt/CLEVB-21_N00235/2015 (A/H5N1) segment 4 (HA)	3081.3	0.000000e+00	1692/1704 (99%)
EPI579782	A/chicken/Egypt/CLEVB-20_N00234/2015 (A/H5N1) segment 4 (HA)	3081.3	0.000000e+00	1692/1704 (99%)
EPI573268	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI557138	A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI573250	A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI573315	A/duck/Egypt/BS-146RS-f6/2014 (A/H5N1) segment 4 (HA)	3068.4	0.000000e+00	1669/1673 (99%)
EPI573321	A/chicken/Egypt/153AF/2015 (A/H5N1) segment 4 (HA)	3055.5	0.000000e+00	1667/1674 (99%)
EPI584783	A/Egypt/MOH-NRC-8434/2014 (A/H5N1) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI573318	A/chicken/Egypt/1478CAL/2014 (A/H5N1) segment 4 (HA)	3044.4	0.000000e+00	1658/1663 (99%)
EPI550493	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 4 (HA)	3042.6	0.000000e+00	1686/1705 (98%)
EPI573330	A/chicken/Egypt/1476CA/2014 (A/H5N1) segment 4 (HA)	3037.0	0.000000e+00	1664/1674 (99%)
EPI573319	A/chicken/Egypt/152/2015 (A/H5N1) segment 4 (HA)	3031.5	0.000000e+00	1661/1671 (99%)
EPI557194	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI573328	A/chicken/Egypt/14168CA/2014 (A/H5N1) segment 4 (HA)	3022.2	0.000000e+00	1654/1663 (99%)
EPI557178	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 4 (HA)	3020.4	0.000000e+00	1681/1703 (98%)
EPI573322	A/chicken/Egypt/152RS/2015 (A/H5N1) segment 4 (HA)	3016.7	0.000000e+00	1660/1674 (99%)
EPI500079	A/goose/Egypt/M7221D/2013 (A/H5N1) segment 4 (HA)	3014.9	0.000000e+00	1681/1705 (98%)
EPI500078	A/chicken/Egypt/M7217A/2013 (A/H5N1) segment 4 (HA)	3014.9	0.000000e+00	1681/1705 (98%)
EPI487342	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 4 (HA)	3014.9	0.000000e+00	1681/1705 (98%)
EPI500109	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 4 (HA)	3011.2	0.000000e+00	1680/1705 (98%)
EPI504991	A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 4 (HA)	3009.3	0.000000e+00	1680/1705 (98%)
EPI504990	A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 4 (HA)	3009.3	0.000000e+00	1680/1705 (98%)
EPI348153	A/chicken/Egypt/11VIR4453-266/2010 (A/H5N1) segment 4 (HA)	3005.6	0.000000e+00	1679/1705 (98%)
EPI597822	A/duck/Egypt/1471SG/2014 (A/H5N1) segment 4 (HA)	3003.8	0.000000e+00	1680/1706 (98%)
EPI557218	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI340133	A/goose/Egypt/1117SF/2011 (A/H5N1) segment 4 (HA)	3003.8	0.000000e+00	1679/1705 (98%)
EPI597818	A/chicken/Egypt/1461S/2014 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1678/1705 (98%)
EPI597815	A/turkey/Egypt/1438S/2014 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1678/1705 (98%)
EPI500082	A/duck/Egypt/M7218B/2013 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1679/1706 (98%)
EPI340135	A/chicken/Egypt/1113/2011 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1678/1705 (98%)
EPI340101	A/chicken/Egypt/1112AF/2011 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1678/1705 (98%)
EPI338733	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1679/1706 (98%)
EPI338732	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1679/1706 (98%)
EPI338616	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 4 (HA)	2998.2	0.000000e+00	1679/1706 (98%)
EPI600754	A/chicken/Egypt/N05832-CLEVB754/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI597812	A/chicken/Egypt/1422S/2014 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI372907	A/Egypt/N7562/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1678/1706 (98%)
EPI348152	A/chicken/Egypt/11VIR4453-268/2010 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI340138	A/duck/Egypt/1125S/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI340103	A/chicken/Egypt/111766V/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI340087	A/duck/Egypt/11193SF/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI340085	A/chicken/Egypt/1118AF/2011 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI338615	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 4 (HA)	2992.7	0.000000e+00	1677/1705 (98%)
EPI574389	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 4 (HA)	2989.0	0.000000e+00	1636/1644 (99%)
EPI597825	A/turkey/Egypt/1414CAL/2014 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI597823	A/turkey/Egypt/14125S/2014 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI597816	A/duck/Egypt/1435CAS/2014 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1677/1706 (98%)
EPI557136	A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI373013	A/Egypt/N00166/2011 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1677/1706 (98%)
EPI373012	A/Egypt/N04286/2011 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI373011	A/Egypt/N04288/2011 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI340151	A/chicken/Egypt/10513S/2010 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI340104	A/chicken/Egypt/117AD/2011 (A/H5N1) segment 4 (HA)	2987.2	0.000000e+00	1676/1705 (98%)
EPI550507	A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 4 (HA)	2985.3	0.000000e+00	1675/1704 (98%)
EPI348158	A/chicken/Egypt/11VIR4453-109/VRLCU/2011 (A/H5N1) segment 4 (HA)	2985.3	0.000000e+00	1675/1704 (98%)
EPI603915	A/duck/Egypt/153AL/2015 (A/H5N1) segment 4 (HA)	2983.5	0.000000e+00	1623/1627 (99%)
EPI373020	A/Egypt/N08932/2010 (A/H5N1) segment 4 (HA)	2983.5	0.000000e+00	1675/1705 (98%)
EPI348160	A/chicken/Egypt/11VIR4453-267/2010 (A/H5N1) segment 4 (HA)	2983.5	0.000000e+00	1674/1703 (98%)
EPI348157	A/chicken/Egypt/11VIR4453-15/VRLCU/2010 (A/H5N1) segment 4 (HA)	2983.5	0.000000e+00	1674/1703 (98%)
EPI348156	A/chicken/Egypt11VIR4453-269/2010 (A/H5N1) segment 4 (HA)	2983.5	0.000000e+00	1674/1704 (98%)
EPI608784	A/chicken/Israel/333/2015 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1632/1641 (99%)
EPI608783	A/turkey/Israel/188/2015 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1632/1641 (99%)
EPI608779	A/chicken/Qalqilya/53/2015 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1632/1641 (99%)
EPI608778	A/chicken/Israel/88/2015 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1632/1641 (99%)
EPI608777	A/turkey/Israel/107/2015 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1632/1641 (99%)
EPI597817	A/chicken/Egypt/1460S/2014 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1675/1705 (98%)
EPI597814	A/chicken/Egypt/1429S/2014 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1675/1705 (98%)
EPI373016	A/Egypt/N10954/2010 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1675/1705 (98%)
EPI340106	A/duck/Egypt/1110AF/2011 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1675/1705 (98%)
EPI340092	A/chicken/Egypt/1155/2011 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1675/1705 (98%)
EPI338618	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1676/1706 (98%)
EPI338610	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 4 (HA)	2981.6	0.000000e+00	1676/1706 (98%)
EPI340118	A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 4 (HA)	2977.9	0.000000e+00	1677/1708 (98%)
EPI608786	A/turkey/Israel/209/2015 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1631/1641 (99%)
EPI608780	A/turkey/Jenin/39/2015 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1631/1641 (99%)
EPI597813	A/chicken/Egypt/1412SD/2014 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI550500	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI537618	A/Egypt/N01754/2014 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI372963	A/Egypt/N10621/2011 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI372875	A/Egypt/N0677/2011 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1675/1706 (98%)
EPI340165	A/duck/Egypt/10228SF/2010 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI340154	A/duck/Egypt/10118/2010 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1675/1706 (98%)
EPI340141	A/chicken/Egypt/112SG/2011 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)
EPI340136	A/chicken/Egypt/1112/2011 (A/H5N1) segment 4 (HA)	2976.1	0.000000e+00	1674/1705 (98%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642538	A/Egypt/682/2015 (A/H5N1) segment 6 (NA)	2490.4	0.000000e+00	1350/1350 (100%)
EPI574134	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 6 (NA)	2484.9	0.000000e+00	1348/1350 (99%)
EPI574127	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 6 (NA)	2479.3	0.000000e+00	1347/1350 (99%)
EPI573259	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 6 (NA)	2479.3	0.000000e+00	1345/1347 (99%)
EPI573251	A/Turkey/Egypt/AR235-S240NLQP/2014 (A/H5N1) segment 6 (NA)	2473.8	0.000000e+00	1344/1347 (99%)
EPI584780	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 6 (NA)	2468.2	0.000000e+00	1345/1350 (99%)
EPI573245	A/Duck/Egypt/AR232-A13NLQP/2014 (A/H5N1) segment 6 (NA)	2468.2	0.000000e+00	1343/1347 (99%)
EPI557137	A/Quail/Egypt/BSU5514-AR2219/2014 (A/H5N1) segment 6 (NA)	2462.7	0.000000e+00	1342/1347 (99%)
EPI623714	A/turkey/Jenin/39/2015 (A/H5N1) segment 6 (NA)	2457.2	0.000000e+00	1343/1350 (99%)
EPI573249	A/chicken/Egypt/AR234-FAOF8NLQP/2014 (A/H5N1) segment 6 (NA)	2457.2	0.000000e+00	1341/1347 (99%)
EPI573247	A/chicken/Egypt/AR233-S283NLQP/2014 (A/H5N1) segment 6 (NA)	2457.2	0.000000e+00	1341/1347 (99%)
EPI573267	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 6 (NA)	2451.6	0.000000e+00	1340/1347 (99%)
EPI573243	A/chicken/Egypt/AR231-CA113NLQP/2014 (A/H5N1) segment 6 (NA)	2446.1	0.000000e+00	1339/1347 (99%)
EPI623713	A/chicken/Qalqilya/333/2015 (A/H5N1) segment 6 (NA)	2440.5	0.000000e+00	1341/1351 (99%)
EPI623706	A/chicken/Qalqilya/53/2015 (A/H5N1) segment 6 (NA)	2440.5	0.000000e+00	1341/1351 (99%)
EPI574388	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 6 (NA)	2440.5	0.000000e+00	1338/1347 (99%)
EPI623712	A/turkey/Israel/274/2015 (A/H5N1) segment 6 (NA)	2429.5	0.000000e+00	1339/1351 (99%)
EPI623708	A/chicken/Israel/156/2015 (A/H5N1) segment 6 (NA)	2429.5	0.000000e+00	1339/1351 (99%)
EPI623707	A/chicken/Israel/88/2015 (A/H5N1) segment 6 (NA)	2429.5	0.000000e+00	1339/1351 (99%)
EPI623711	A/turkey/Israel/209/2015 (A/H5N1) segment 6 (NA)	2423.9	0.000000e+00	1338/1351 (99%)
EPI623710	A/turkey/Israel/188/2015 (A/H5N1) segment 6 (NA)	2423.9	0.000000e+00	1339/1352 (99%)
EPI557177	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 6 (NA)	2418.4	0.000000e+00	1334/1347 (99%)
EPI538814	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 6 (NA)	2418.4	0.000000e+00	1335/1349 (98%)
EPI538798	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 6 (NA)	2418.4	0.000000e+00	1335/1349 (98%)
EPI493506	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 6 (NA)	2418.4	0.000000e+00	1336/1350 (98%)
EPI538790	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 6 (NA)	2416.5	0.000000e+00	1335/1349 (98%)
EPI557193	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 6 (NA)	2412.8	0.000000e+00	1333/1347 (98%)
EPI550502	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 6 (NA)	2412.8	0.000000e+00	1334/1349 (98%)
EPI504999	A/chicken/Egypt/BSU-BS-R24/2012 (A/H5N1) segment 6 (NA)	2405.5	0.000000e+00	1333/1349 (98%)
EPI504998	A/chicken/Egypt/BSU-BS-F27/2012 (A/H5N1) segment 6 (NA)	2405.5	0.000000e+00	1333/1349 (98%)
EPI504997	A/chicken/Egypt/BSU-FA-M28/2012 (H5N1) (A/H5N1) segment 6 (NA)	2405.5	0.000000e+00	1333/1349 (98%)
EPI536596	A/Egypt/N01753/2014 (A/H5N1) segment 6 (NA)	2401.8	0.000000e+00	1333/1350 (98%)
EPI493446	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 6 (NA)	2401.8	0.000000e+00	1333/1350 (98%)
EPI550508	A/duck/Egypt/14VIR784-8-1339S/2013 (A/H5N1) segment 6 (NA)	2399.9	0.000000e+00	1332/1349 (98%)
EPI557135	A/Turkey/Egypt/BSU5114-AR2218/2014 (A/H5N1) segment 6 (NA)	2396.2	0.000000e+00	1330/1347 (98%)
EPI538774	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 6 (NA)	2396.2	0.000000e+00	1331/1349 (98%)
EPI537619	A/Egypt/N01754/2014 (A/H5N1) segment 6 (NA)	2396.2	0.000000e+00	1332/1350 (98%)
EPI493559	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 6 (NA)	2396.2	0.000000e+00	1332/1350 (98%)
EPI538782	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 6 (NA)	2394.4	0.000000e+00	1331/1349 (98%)
EPI493499	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 6 (NA)	2390.7	0.000000e+00	1331/1350 (98%)
EPI623709	A/turkey/Israel/174/2015 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1333/1353 (98%)
EPI574380	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1328/1347 (98%)
EPI557217	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1328/1347 (98%)
EPI557201	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1328/1347 (98%)
EPI493432	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1330/1350 (98%)
EPI493398	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1330/1350 (98%)
EPI372850	A/Egypt/N0544/2011 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1330/1350 (98%)
EPI336859	A/turkey/Jenin/341/2011 (A/H5N1) segment 6 (NA)	2385.1	0.000000e+00	1330/1350 (98%)
EPI387566	A/duck/Egypt/1113SD/2011 (A/H5N1) segment 6 (NA)	2383.3	0.000000e+00	1329/1349 (98%)
EPI372890	A/Egypt/N6828/2011 (A/H5N1) segment 6 (NA)	2381.5	0.000000e+00	1329/1350 (98%)
EPI538822	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1325/1345 (98%)
EPI493356	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493348	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493342	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493279	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493207	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493194	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI493056	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 6 (NA)	2379.6	0.000000e+00	1329/1350 (98%)
EPI372882	A/Egypt/N6774/2011 (A/H5N1) segment 6 (NA)	2375.9	0.000000e+00	1328/1350 (98%)
EPI493363	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 6 (NA)	2374.1	0.000000e+00	1328/1350 (98%)
EPI493127	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 6 (NA)	2374.1	0.000000e+00	1328/1350 (98%)
EPI372866	A/Egypt/N6658/2011 (A/H5N1) segment 6 (NA)	2374.1	0.000000e+00	1328/1350 (98%)
EPI538766	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 6 (NA)	2372.2	0.000000e+00	1327/1349 (98%)
EPI372874	A/Egypt/N0677/2011 (A/H5N1) segment 6 (NA)	2368.5	0.000000e+00	1327/1350 (98%)
EPI255419	A/Egypt/N14604/2009 (A/H5N1) segment 6 (NA)	2368.5	0.000000e+00	1327/1350 (98%)
EPI550495	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 6 (NA)	2366.7	0.000000e+00	1302/1313 (99%)
EPI538806	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 6 (NA)	2366.7	0.000000e+00	1309/1324 (98%)
EPI372922	A/Egypt/N7724/2011 (A/H5N1) segment 6 (NA)	2364.8	0.000000e+00	1326/1350 (98%)
EPI393784	A/Egypt/N00951/2012 (A/H5N1) segment 6 (NA)	2363.0	0.000000e+00	1326/1350 (98%)
EPI372962	A/Egypt/N10621/2011 (A/H5N1) segment 6 (NA)	2363.0	0.000000e+00	1326/1350 (98%)
EPI387571	A/chicken/Egypt/1158SF/2011 (A/H5N1) segment 6 (NA)	2361.1	0.000000e+00	1325/1349 (98%)
EPI460396	A/chicken/Egypt/1094/2010 (A/H5N1) segment 6 (NA)	2359.3	0.000000e+00	1320/1342 (98%)
EPI393787	A/Egypt/N02137/2012 (A/H5N1) segment 6 (NA)	2357.4	0.000000e+00	1325/1350 (98%)
EPI372914	A/Egypt/N7592/2011 (A/H5N1) segment 6 (NA)	2357.4	0.000000e+00	1325/1350 (98%)
EPI372858	A/Egypt/N6322/2011 (A/H5N1) segment 6 (NA)	2357.4	0.000000e+00	1325/1350 (98%)
EPI338186	A/harrier/Israel/531/2011 (A/H5N1) segment 6 (NA)	2357.4	0.000000e+00	1326/1351 (98%)
EPI255372	A/Egypt/N02127/2010 (A/H5N1) segment 6 (NA)	2357.4	0.000000e+00	1325/1350 (98%)
EPI493067	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI372938	A/Egypt/N11126/2011 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI372930	A/Egypt/N09966/2011 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI372906	A/Egypt/N7562/2011 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI255399	A/Egypt/N09174/2009 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI255368	A/Egypt/N01982/2010 (A/H5N1) segment 6 (NA)	2351.9	0.000000e+00	1324/1350 (98%)
EPI493471	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 6 (NA)	2346.4	0.000000e+00	1323/1350 (98%)
EPI372954	A/Egypt/N14976/2011 (A/H5N1) segment 6 (NA)	2346.4	0.000000e+00	1324/1351 (98%)
EPI372946	A/Egypt/N11470/2011 (A/H5N1) segment 6 (NA)	2346.4	0.000000e+00	1324/1351 (98%)
EPI294611	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 6 (NA)	2344.5	0.000000e+00	1322/1349 (97%)
EPI294490	A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 6 (NA)	2344.5	0.000000e+00	1322/1349 (97%)
EPI557209	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1321/1348 (97%)
EPI493531	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI493169	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI493154	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI398580	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI255387	A/Egypt/N05049/2009 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI255376	A/Egypt/N02770/2010 (A/H5N1) segment 6 (NA)	2340.8	0.000000e+00	1322/1350 (97%)
EPI372714	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 6 (NA)	2337.1	0.000000e+00	1321/1350 (97%)
EPI550488	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 6 (NA)	2333.4	0.000000e+00	1320/1349 (97%)
EPI294576	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 6 (NA)	2333.4	0.000000e+00	1320/1349 (97%)
EPI573331	A/duck/Egypt/14154FAOS/2014 (A/H5N1) segment 6 (NA)	2331.6	0.000000e+00	1277/1285 (99%)
EPI387567	A/goose/Egypt/1117SF/2011 (A/H5N1) segment 6 (NA)	2331.6	0.000000e+00	1297/1315 (98%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642539	A/Egypt/682/2015 (A/H5N1) segment 7 (MP)	1810.8	0.000000e+00	982/982 (100%)
EPI574128	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 7 (MP)	1810.8	0.000000e+00	981/982 (99%)
EPI573255	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI574384	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 7 (MP)	1801.6	0.000000e+00	979/982 (99%)
EPI574135	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI573263	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI550494	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI493357	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI493328	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI493195	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI493058	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI393788	A/Egypt/N02137/2012 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI372854	A/Egypt/N6322/2011 (A/H5N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI584781	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	976/984 (99%)
EPI557173	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	972/979 (99%)
EPI493566	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI493447	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI493036	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI398179	A/chicken/Giza/CAI26/2011 (A/H5) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI372846	A/Egypt/N0544/2011 (A/H5N1) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI557213	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	971/979 (99%)
EPI550501	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI538778	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI493507	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI493472	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI493364	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI438244	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI438242	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI438240	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI374700	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372910	A/Egypt/N7592/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372886	A/Egypt/N6828/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372878	A/Egypt/N6774/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372870	A/Egypt/N0677/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372862	A/Egypt/N6658/2011 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372730	A/Egypt/9174-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI372710	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1766.5	0.000000e+00	973/982 (99%)
EPI294607	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 7 (MP)	1764.7	0.000000e+00	972/981 (99%)
EPI574376	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 7 (MP)	1762.8	0.000000e+00	972/982 (98%)
EPI557189	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	970/979 (99%)
EPI557181	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	970/979 (99%)
EPI557165	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	970/979 (99%)
EPI538802	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI493500	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI493418	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI493170	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI493155	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI493068	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI393224	A/chicken/Egypt/1034/2010 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI372926	A/Egypt/N09966/2011 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI372902	A/Egypt/N7562/2011 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI372816	A/Egypt/N02038/2010 (A/H5N1) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI557197	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	969/979 (98%)
EPI538818	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI538786	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	969/979 (98%)
EPI493532	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI393785	A/Egypt/N00951/2012 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI393174	A/chicken/Egypt/11669S/2011 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI372918	A/Egypt/N7724/2011 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI372828	A/Egypt/N02554/2010 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI372822	A/Egypt/N02127/2010 (A/H5N1) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI538770	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 7 (MP)	1753.6	0.000000e+00	967/977 (98%)
EPI294649	A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 7 (MP)	1753.6	0.000000e+00	970/981 (98%)
EPI294465	A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 7 (MP)	1753.6	0.000000e+00	970/981 (98%)
EPI557205	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	968/979 (98%)
EPI493433	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI493425	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI493405	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI493121	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI438243	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI438239	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372958	A/Egypt/N10621/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372934	A/Egypt/N11126/2011 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372834	A/Egypt/N03071/2010 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372704	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372698	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI372674	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI294628	A/chicken/Egypt/3982-44/2010 (A/H5N1) segment 7 (MP)	1748.1	0.000000e+00	969/981 (98%)
EPI538762	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 7 (MP)	1746.2	0.000000e+00	966/977 (98%)
EPI550487	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI550480	A/chicken/Egypt/14VIR784-11-133AL/2013 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI393216	A/chicken/Egypt/0894-NLQP/2008 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372950	A/Egypt/N14976/2011 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372942	A/Egypt/N11470/2011 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372774	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372768	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372724	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372692	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI372686	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1744.4	0.000000e+00	969/982 (98%)
EPI393225	A/chicken/Egypt/0987-NLQP/2009 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI393175	A/chicken/Egypt/11316SS/2011 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI372810	A/Egypt/N01982/2010 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI372786	A/Egypt/3450-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI372762	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI372748	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1738.8	0.000000e+00	968/982 (98%)
EPI294572	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 7 (MP)	1735.1	0.000000e+00	958/968 (98%)
EPI372680	A/Egypt/0606-NAMRU3/2009 (A/H5N1) segment 7 (MP)	1733.3	0.000000e+00	967/982 (98%)
EPI538794	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 7 (MP)	1731.4	0.000000e+00	956/966 (98%)
EPI294544	A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 7 (MP)	1731.4	0.000000e+00	962/975 (98%)
EPI372804	A/Egypt/N01644/2010 (A/H5N1) segment 7 (MP)	1727.7	0.000000e+00	968/984 (98%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642544	A/Egypt/682/2015 (A/H5N1) segment 1 (PB2)	4211.5	0.000000e+00	2280/2280 (100%)
EPI574123	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 1 (PB2)	4194.9	0.000000e+00	2277/2280 (99%)
EPI573257	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI574386	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 1 (PB2)	4183.8	0.000000e+00	2275/2280 (99%)
EPI584776	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 1 (PB2)	4178.2	0.000000e+00	2274/2280 (99%)
EPI574130	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 1 (PB2)	4178.2	0.000000e+00	2274/2280 (99%)
EPI573265	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 1 (PB2)	4133.9	0.000000e+00	2266/2280 (99%)
EPI557175	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 1 (PB2)	4128.4	0.000000e+00	2266/2281 (99%)
EPI557191	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 1 (PB2)	4106.2	0.000000e+00	2262/2281 (99%)
EPI493442	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 1 (PB2)	4106.2	0.000000e+00	2263/2282 (99%)
EPI557215	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 1 (PB2)	4100.7	0.000000e+00	2262/2282 (99%)
EPI493502	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 1 (PB2)	4095.1	0.000000e+00	2261/2282 (99%)
EPI557207	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 1 (PB2)	4078.5	0.000000e+00	2258/2282 (98%)
EPI557199	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 1 (PB2)	4073.0	0.000000e+00	2257/2282 (98%)
EPI493352	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 1 (PB2)	4050.8	0.000000e+00	2253/2282 (98%)
EPI493275	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 1 (PB2)	4050.8	0.000000e+00	2253/2282 (98%)
EPI493053	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 1 (PB2)	4050.8	0.000000e+00	2253/2282 (98%)
EPI574378	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 1 (PB2)	4045.3	0.000000e+00	2251/2281 (98%)
EPI493551	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 1 (PB2)	4045.3	0.000000e+00	2252/2282 (98%)
EPI493528	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 1 (PB2)	4039.7	0.000000e+00	2251/2282 (98%)
EPI493494	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 1 (PB2)	4039.7	0.000000e+00	2251/2282 (98%)
EPI493190	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 1 (PB2)	4039.7	0.000000e+00	2251/2282 (98%)
EPI493122	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 1 (PB2)	4039.7	0.000000e+00	2251/2282 (98%)
EPI493391	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 1 (PB2)	4034.2	0.000000e+00	2250/2282 (98%)
EPI493345	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 1 (PB2)	4034.2	0.000000e+00	2250/2282 (98%)
EPI493395	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 1 (PB2)	4028.7	0.000000e+00	2249/2282 (98%)
EPI372848	A/Egypt/N0544/2011 (A/H5N1) segment 1 (PB2)	4028.7	0.000000e+00	2249/2282 (98%)
EPI493339	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 1 (PB2)	4023.1	0.000000e+00	2248/2282 (98%)
EPI493203	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 1 (PB2)	4023.1	0.000000e+00	2248/2282 (98%)
EPI372912	A/Egypt/N7592/2011 (A/H5N1) segment 1 (PB2)	4023.1	0.000000e+00	2248/2282 (98%)
EPI372864	A/Egypt/N6658/2011 (A/H5N1) segment 1 (PB2)	4019.4	0.000000e+00	2247/2282 (98%)
EPI493475	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 1 (PB2)	4017.6	0.000000e+00	2247/2282 (98%)
EPI372888	A/Egypt/N6828/2011 (A/H5N1) segment 1 (PB2)	4017.6	0.000000e+00	2247/2282 (98%)
EPI372880	A/Egypt/N6774/2011 (A/H5N1) segment 1 (PB2)	4017.6	0.000000e+00	2247/2282 (98%)
EPI372812	A/Egypt/N01982/2010 (A/H5N1) segment 1 (PB2)	4017.6	0.000000e+00	2247/2282 (98%)
EPI550506	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 1 (PB2)	4013.9	0.000000e+00	2231/2259 (98%)
EPI493359	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 1 (PB2)	4012.0	0.000000e+00	2246/2282 (98%)
EPI372928	A/Egypt/N09966/2011 (A/H5N1) segment 1 (PB2)	4012.0	0.000000e+00	2246/2282 (98%)
EPI372904	A/Egypt/N7562/2011 (A/H5N1) segment 1 (PB2)	4012.0	0.000000e+00	2246/2282 (98%)
EPI372872	A/Egypt/N0677/2011 (A/H5N1) segment 1 (PB2)	4012.0	0.000000e+00	2246/2282 (98%)
EPI538788	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 1 (PB2)	4008.4	0.000000e+00	2207/2225 (99%)
EPI538796	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2206/2224 (99%)
EPI372952	A/Egypt/N14976/2011 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI372944	A/Egypt/N11470/2011 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI372920	A/Egypt/N7724/2011 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI372856	A/Egypt/N6322/2011 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI372824	A/Egypt/N02127/2010 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI372732	A/Egypt/9174-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	4006.5	0.000000e+00	2245/2282 (98%)
EPI550499	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 1 (PB2)	4004.7	0.000000e+00	2189/2199 (99%)
EPI538804	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 1 (PB2)	4004.7	0.000000e+00	2205/2223 (99%)
EPI493415	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 1 (PB2)	4001.0	0.000000e+00	2244/2282 (98%)
EPI493165	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 1 (PB2)	4001.0	0.000000e+00	2244/2282 (98%)
EPI493149	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 1 (PB2)	4001.0	0.000000e+00	2244/2282 (98%)
EPI372936	A/Egypt/N11126/2011 (A/H5N1) segment 1 (PB2)	4001.0	0.000000e+00	2244/2282 (98%)
EPI538812	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 1 (PB2)	3999.1	0.000000e+00	2202/2220 (99%)
EPI493420	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 1 (PB2)	3995.4	0.000000e+00	2243/2282 (98%)
EPI493400	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 1 (PB2)	3995.4	0.000000e+00	2243/2282 (98%)
EPI493076	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 1 (PB2)	3995.4	0.000000e+00	2243/2282 (98%)
EPI372712	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3993.6	0.000000e+00	2242/2282 (98%)
EPI372960	A/Egypt/N10621/2011 (A/H5N1) segment 1 (PB2)	3989.9	0.000000e+00	2242/2282 (98%)
EPI538820	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 1 (PB2)	3978.8	0.000000e+00	2198/2219 (99%)
EPI493063	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 1 (PB2)	3978.8	0.000000e+00	2240/2282 (98%)
EPI538764	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 1 (PB2)	3962.2	0.000000e+00	2199/2225 (98%)
EPI372726	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3962.2	0.000000e+00	2237/2282 (98%)
EPI372830	A/Egypt/N02554/2010 (A/H5N1) segment 1 (PB2)	3958.5	0.000000e+00	2236/2282 (97%)
EPI372706	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3951.1	0.000000e+00	2235/2282 (97%)
EPI294481	A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 1 (PB2)	3949.3	0.000000e+00	2214/2251 (98%)
EPI538780	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 1 (PB2)	3945.6	0.000000e+00	2192/2219 (98%)
EPI538772	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 1 (PB2)	3945.6	0.000000e+00	2192/2219 (98%)
EPI372836	A/Egypt/N03071/2010 (A/H5N1) segment 1 (PB2)	3945.6	0.000000e+00	2234/2282 (97%)
EPI372818	A/Egypt/N02038/2010 (A/H5N1) segment 1 (PB2)	3945.6	0.000000e+00	2234/2282 (97%)
EPI294609	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 1 (PB2)	3943.7	0.000000e+00	2219/2260 (98%)
EPI557183	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 1 (PB2)	3934.5	0.000000e+00	2233/2283 (97%)
EPI557167	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 1 (PB2)	3934.5	0.000000e+00	2233/2283 (97%)
EPI493561	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 1 (PB2)	3928.9	0.000000e+00	2232/2283 (97%)
EPI493031	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 1 (PB2)	3928.9	0.000000e+00	2232/2283 (97%)
EPI372700	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3923.4	0.000000e+00	2230/2282 (97%)
EPI372694	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3923.4	0.000000e+00	2230/2282 (97%)
EPI372688	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3923.4	0.000000e+00	2230/2282 (97%)
EPI294658	A/poultry/Egypt/3982-56/2010 (A/H5N1) segment 1 (PB2)	3919.7	0.000000e+00	2204/2244 (98%)
EPI372676	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3917.9	0.000000e+00	2229/2282 (97%)
EPI294651	A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 1 (PB2)	3914.2	0.000000e+00	2203/2244 (98%)
EPI372764	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3910.5	0.000000e+00	2227/2282 (97%)
EPI372770	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3906.8	0.000000e+00	2228/2283 (97%)
EPI372750	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3906.8	0.000000e+00	2227/2282 (97%)
EPI372782	A/Egypt/4394-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3904.9	0.000000e+00	2226/2282 (97%)
EPI294467	A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 1 (PB2)	3899.4	0.000000e+00	2209/2257 (97%)
EPI372806	A/Egypt/N01644/2010 (A/H5N1) segment 1 (PB2)	3895.7	0.000000e+00	2225/2282 (97%)
EPI372794	A/Egypt/N11981/2009 (A/H5N1) segment 1 (PB2)	3895.7	0.000000e+00	2225/2282 (97%)
EPI372788	A/Egypt/3450-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3890.2	0.000000e+00	2224/2282 (97%)
EPI372682	A/Egypt/0606-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3890.2	0.000000e+00	2224/2282 (97%)
EPI620895	A/chicken/Egypt/102d/2010 (A/H5N1) segment 1 (PB2)	3884.6	0.000000e+00	2224/2283 (97%)
EPI372842	A/Egypt/N03072/2010 (A/H5N1) segment 1 (PB2)	3884.6	0.000000e+00	2223/2282 (97%)
EPI372800	A/Egypt/N01360/2010 (A/H5N1) segment 1 (PB2)	3873.5	0.000000e+00	2220/2281 (97%)
EPI294574	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 1 (PB2)	3864.3	0.000000e+00	2172/2211 (98%)
EPI372758	A/Egypt/2752-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3856.9	0.000000e+00	2220/2284 (97%)
EPI372896	A/Egypt/N0423/2011 (A/H5N1) segment 1 (PB2)	3851.4	0.000000e+00	2217/2282 (97%)
EPI372776	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 1 (PB2)	3851.4	0.000000e+00	2216/2282 (97%)
EPI294546	A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 1 (PB2)	3851.4	0.000000e+00	2169/2210 (98%)
EPI372578	A/Egypt/394-NAMRU3/2007 (A/H5N1) segment 1 (PB2)	3840.3	0.000000e+00	2216/2283 (97%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642543	A/Egypt/682/2015 (A/H5N1) segment 2 (PB1)	4193.0	0.000000e+00	2274/2274 (100%)
EPI574124	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 2 (PB1)	4193.0	0.000000e+00	2272/2274 (99%)
EPI574131	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 2 (PB1)	4170.9	0.000000e+00	2268/2274 (99%)
EPI573258	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 2 (PB1)	4170.9	0.000000e+00	2268/2274 (99%)
EPI573266	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 2 (PB1)	4148.7	0.000000e+00	2264/2274 (99%)
EPI574387	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 2 (PB1)	4100.7	0.000000e+00	2229/2235 (99%)
EPI557176	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 2 (PB1)	4098.8	0.000000e+00	2253/2271 (99%)
EPI493503	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 2 (PB1)	4098.8	0.000000e+00	2255/2274 (99%)
EPI538813	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 2 (PB1)	4084.1	0.000000e+00	2247/2266 (99%)
EPI493443	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 2 (PB1)	4082.2	0.000000e+00	2252/2274 (99%)
EPI493346	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 2 (PB1)	4082.2	0.000000e+00	2252/2274 (99%)
EPI557192	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 2 (PB1)	4076.7	0.000000e+00	2249/2271 (99%)
EPI493428	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 2 (PB1)	4076.7	0.000000e+00	2251/2274 (98%)
EPI493396	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 2 (PB1)	4076.7	0.000000e+00	2251/2274 (98%)
EPI584777	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 2 (PB1)	4071.1	0.000000e+00	2250/2274 (98%)
EPI372849	A/Egypt/N0544/2011 (A/H5N1) segment 2 (PB1)	4071.1	0.000000e+00	2250/2274 (98%)
EPI538781	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 2 (PB1)	4067.4	0.000000e+00	2244/2266 (99%)
EPI538773	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 2 (PB1)	4067.4	0.000000e+00	2244/2266 (99%)
EPI557216	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2247/2271 (98%)
EPI493537	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2249/2274 (98%)
EPI493495	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2249/2274 (98%)
EPI493276	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2249/2274 (98%)
EPI372929	A/Egypt/N09966/2011 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2250/2275 (98%)
EPI372865	A/Egypt/N6658/2011 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2249/2274 (98%)
EPI372857	A/Egypt/N6322/2011 (A/H5N1) segment 2 (PB1)	4065.6	0.000000e+00	2249/2274 (98%)
EPI493556	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 2 (PB1)	4060.1	0.000000e+00	2248/2274 (98%)
EPI493421	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 2 (PB1)	4060.1	0.000000e+00	2249/2275 (98%)
EPI493353	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 2 (PB1)	4060.1	0.000000e+00	2248/2274 (98%)
EPI493191	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 2 (PB1)	4060.1	0.000000e+00	2248/2274 (98%)
EPI372881	A/Egypt/N6774/2011 (A/H5N1) segment 2 (PB1)	4058.2	0.000000e+00	2247/2274 (98%)
EPI538821	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 2 (PB1)	4056.4	0.000000e+00	2242/2266 (98%)
EPI557208	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 2 (PB1)	4054.5	0.000000e+00	2245/2271 (98%)
EPI493150	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 2 (PB1)	4054.5	0.000000e+00	2248/2275 (98%)
EPI372913	A/Egypt/N7592/2011 (A/H5N1) segment 2 (PB1)	4050.8	0.000000e+00	2246/2274 (98%)
EPI372889	A/Egypt/N6828/2011 (A/H5N1) segment 2 (PB1)	4050.8	0.000000e+00	2246/2274 (98%)
EPI493166	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 2 (PB1)	4049.0	0.000000e+00	2247/2275 (98%)
EPI493123	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 2 (PB1)	4049.0	0.000000e+00	2246/2274 (98%)
EPI550498	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 2 (PB1)	4047.1	0.000000e+00	2213/2225 (99%)
EPI557200	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 2 (PB1)	4043.4	0.000000e+00	2243/2271 (98%)
EPI493054	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 2 (PB1)	4043.4	0.000000e+00	2245/2274 (98%)
EPI372961	A/Egypt/N10621/2011 (A/H5N1) segment 2 (PB1)	4043.4	0.000000e+00	2245/2274 (98%)
EPI372921	A/Egypt/N7724/2011 (A/H5N1) segment 2 (PB1)	4037.9	0.000000e+00	2244/2274 (98%)
EPI372873	A/Egypt/N0677/2011 (A/H5N1) segment 2 (PB1)	4037.9	0.000000e+00	2244/2274 (98%)
EPI493468	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 2 (PB1)	4032.4	0.000000e+00	2243/2274 (98%)
EPI493340	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 2 (PB1)	4032.4	0.000000e+00	2243/2274 (98%)
EPI493204	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 2 (PB1)	4032.4	0.000000e+00	2243/2274 (98%)
EPI372953	A/Egypt/N14976/2011 (A/H5N1) segment 2 (PB1)	4026.8	0.000000e+00	2242/2274 (98%)
EPI372937	A/Egypt/N11126/2011 (A/H5N1) segment 2 (PB1)	4026.8	0.000000e+00	2242/2274 (98%)
EPI372733	A/Egypt/9174-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	4023.1	0.000000e+00	2241/2274 (98%)
EPI372905	A/Egypt/N7562/2011 (A/H5N1) segment 2 (PB1)	4021.3	0.000000e+00	2241/2274 (98%)
EPI372825	A/Egypt/N02127/2010 (A/H5N1) segment 2 (PB1)	4021.3	0.000000e+00	2241/2274 (98%)
EPI372813	A/Egypt/N01982/2010 (A/H5N1) segment 2 (PB1)	4021.3	0.000000e+00	2241/2274 (98%)
EPI550505	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 2 (PB1)	4019.4	0.000000e+00	2220/2243 (98%)
EPI557184	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 2 (PB1)	4015.7	0.000000e+00	2238/2271 (98%)
EPI493360	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 2 (PB1)	4015.7	0.000000e+00	2240/2274 (98%)
EPI294547	A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 2 (PB1)	4015.7	0.000000e+00	2240/2274 (98%)
EPI538789	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 2 (PB1)	4010.2	0.000000e+00	2208/2228 (99%)
EPI372713	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	4008.4	0.000000e+00	2238/2274 (98%)
EPI557168	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 2 (PB1)	4004.7	0.000000e+00	2236/2271 (98%)
EPI372945	A/Egypt/N11470/2011 (A/H5N1) segment 2 (PB1)	4004.7	0.000000e+00	2238/2274 (98%)
EPI372831	A/Egypt/N02554/2010 (A/H5N1) segment 2 (PB1)	4004.7	0.000000e+00	2239/2275 (98%)
EPI538797	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 2 (PB1)	4002.8	0.000000e+00	2203/2222 (99%)
EPI538805	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 2 (PB1)	4001.0	0.000000e+00	2203/2223 (99%)
EPI294610	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 2 (PB1)	3999.1	0.000000e+00	2233/2268 (98%)
EPI294575	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 2 (PB1)	3995.4	0.000000e+00	2236/2274 (98%)
EPI493077	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 2 (PB1)	3993.6	0.000000e+00	2236/2274 (98%)
EPI493562	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 2 (PB1)	3991.7	0.000000e+00	2238/2276 (98%)
EPI493032	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 2 (PB1)	3991.7	0.000000e+00	2238/2276 (98%)
EPI294482	A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 2 (PB1)	3988.0	0.000000e+00	2230/2267 (98%)
EPI294659	A/poultry/Egypt/3982-56/2010 (A/H5N1) segment 2 (PB1)	3984.3	0.000000e+00	2234/2274 (98%)
EPI493401	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 2 (PB1)	3982.5	0.000000e+00	2235/2275 (98%)
EPI372837	A/Egypt/N03071/2010 (A/H5N1) segment 2 (PB1)	3982.5	0.000000e+00	2235/2275 (98%)
EPI574379	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 2 (PB1)	3980.7	0.000000e+00	2207/2235 (98%)
EPI493427	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 2 (PB1)	3977.0	0.000000e+00	2233/2274 (98%)
EPI294652	A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 2 (PB1)	3977.0	0.000000e+00	2229/2268 (98%)
EPI372707	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3971.4	0.000000e+00	2232/2274 (98%)
EPI294582	A/duck/Egypt/3982-12/2010 (A/H5N1) segment 2 (PB1)	3960.3	0.000000e+00	2230/2274 (98%)
EPI538765	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 2 (PB1)	3958.5	0.000000e+00	2195/2222 (98%)
EPI294468	A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 2 (PB1)	3954.8	0.000000e+00	2229/2274 (98%)
EPI372819	A/Egypt/N02038/2010 (A/H5N1) segment 2 (PB1)	3949.3	0.000000e+00	2228/2274 (97%)
EPI390990	A/chicken/Egypt/1029/2010 (A/H5N1) segment 2 (PB1)	3947.4	0.000000e+00	2213/2252 (98%)
EPI372727	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3947.4	0.000000e+00	2227/2274 (97%)
EPI550484	A/chicken/Egypt/14VIR784-11-133AL/2013 (A/H5N1) segment 2 (PB1)	3945.6	0.000000e+00	2208/2245 (98%)
EPI372701	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3943.7	0.000000e+00	2227/2274 (97%)
EPI372677	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3943.7	0.000000e+00	2227/2274 (97%)
EPI372765	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3938.2	0.000000e+00	2226/2274 (97%)
EPI294568	A/chicken/Egypt/3982-5/2010 (A/H5N1) segment 2 (PB1)	3938.2	0.000000e+00	2215/2257 (98%)
EPI550491	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 2 (PB1)	3934.5	0.000000e+00	2200/2236 (98%)
EPI493064	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 2 (PB1)	3921.6	0.000000e+00	2223/2274 (97%)
EPI372771	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3921.6	0.000000e+00	2223/2274 (97%)
EPI372783	A/Egypt/4394-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3916.0	0.000000e+00	2222/2274 (97%)
EPI372789	A/Egypt/3450-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3912.3	0.000000e+00	2222/2275 (97%)
EPI372695	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3910.5	0.000000e+00	2221/2274 (97%)
EPI372689	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3910.5	0.000000e+00	2221/2274 (97%)
EPI372807	A/Egypt/N01644/2010 (A/H5N1) segment 2 (PB1)	3904.9	0.000000e+00	2220/2274 (97%)
EPI372795	A/Egypt/N11981/2009 (A/H5N1) segment 2 (PB1)	3899.4	0.000000e+00	2219/2274 (97%)
EPI372751	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3899.4	0.000000e+00	2219/2274 (97%)
EPI372777	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3895.7	0.000000e+00	2218/2274 (97%)
EPI538757	A/chicken/Egypt/13VIR-2962-24/2013 (A/H5N1) segment 2 (PB1)	3892.0	0.000000e+00	2183/2222 (98%)
EPI372759	A/Egypt/2752-NAMRU3/2009 (A/H5N1) segment 2 (PB1)	3888.3	0.000000e+00	2216/2274 (97%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642542	A/Egypt/682/2015 (A/H5N1) segment 3 (PA)	3973.3	0.000000e+00	2151/2151 (100%)
EPI574121	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 3 (PA)	3958.5	0.000000e+00	2148/2151 (99%)
EPI574120	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 3 (PA)	3951.1	0.000000e+00	2147/2151 (99%)
EPI574385	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 3 (PA)	3941.9	0.000000e+00	2145/2151 (99%)
EPI549740	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 3 (PA)	3940.0	0.000000e+00	2145/2151 (99%)
EPI573256	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 3 (PA)	3934.5	0.000000e+00	2144/2151 (99%)
EPI584360	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 3 (PA)	3928.9	0.000000e+00	2143/2151 (99%)
EPI573264	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 3 (PA)	3928.9	0.000000e+00	2143/2151 (99%)
EPI538811	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 3 (PA)	3912.3	0.000000e+00	2140/2151 (99%)
EPI538803	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI557190	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI538787	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 3 (PA)	3901.2	0.000000e+00	2134/2145 (99%)
EPI538795	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 3 (PA)	3895.7	0.000000e+00	2131/2142 (99%)
EPI493481	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI493536	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 3 (PA)	3873.5	0.000000e+00	2133/2151 (99%)
EPI557214	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 3 (PA)	3868.0	0.000000e+00	2132/2151 (99%)
EPI574377	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 3 (PA)	3860.6	0.000000e+00	2130/2151 (99%)
EPI557206	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 3 (PA)	3834.8	0.000000e+00	2126/2151 (98%)
EPI557198	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 3 (PA)	3834.8	0.000000e+00	2126/2151 (98%)
EPI538763	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 3 (PA)	3831.1	0.000000e+00	2126/2152 (98%)
EPI493558	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493527	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493408	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493347	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493341	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493205	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 3 (PA)	3829.2	0.000000e+00	2125/2151 (98%)
EPI493467	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 3 (PA)	3823.7	0.000000e+00	2124/2151 (98%)
EPI493361	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 3 (PA)	3823.7	0.000000e+00	2124/2151 (98%)
EPI372927	A/Egypt/N09966/2011 (A/H5N1) segment 3 (PA)	3823.7	0.000000e+00	2124/2151 (98%)
EPI493416	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493354	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493277	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493199	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493192	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493186	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493055	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI372879	A/Egypt/N6774/2011 (A/H5N1) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI493529	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 3 (PA)	3812.6	0.000000e+00	2122/2151 (98%)
EPI493469	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 3 (PA)	3812.6	0.000000e+00	2122/2151 (98%)
EPI372847	A/Egypt/N0544/2011 (A/H5N1) segment 3 (PA)	3812.6	0.000000e+00	2123/2152 (98%)
EPI538819	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 3 (PA)	3810.8	0.000000e+00	2101/2120 (99%)
EPI372911	A/Egypt/N7592/2011 (A/H5N1) segment 3 (PA)	3808.9	0.000000e+00	2121/2151 (98%)
EPI538779	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 3 (PA)	3807.1	0.000000e+00	2121/2151 (98%)
EPI493125	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 3 (PA)	3807.1	0.000000e+00	2121/2151 (98%)
EPI372887	A/Egypt/N6828/2011 (A/H5N1) segment 3 (PA)	3807.1	0.000000e+00	2121/2151 (98%)
EPI372855	A/Egypt/N6322/2011 (A/H5N1) segment 3 (PA)	3803.4	0.000000e+00	2120/2151 (98%)
EPI372919	A/Egypt/N7724/2011 (A/H5N1) segment 3 (PA)	3801.5	0.000000e+00	2120/2151 (98%)
EPI372863	A/Egypt/N6658/2011 (A/H5N1) segment 3 (PA)	3801.5	0.000000e+00	2120/2151 (98%)
EPI538771	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 3 (PA)	3794.1	0.000000e+00	2118/2151 (98%)
EPI372951	A/Egypt/N14976/2011 (A/H5N1) segment 3 (PA)	3790.4	0.000000e+00	2119/2152 (98%)
EPI372943	A/Egypt/N11470/2011 (A/H5N1) segment 3 (PA)	3790.4	0.000000e+00	2119/2152 (98%)
EPI372935	A/Egypt/N11126/2011 (A/H5N1) segment 3 (PA)	3790.4	0.000000e+00	2119/2152 (98%)
EPI557174	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 3 (PA)	3779.4	0.000000e+00	2117/2152 (98%)
EPI493597	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 3 (PA)	3779.4	0.000000e+00	2117/2152 (98%)
EPI493065	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 3 (PA)	3779.4	0.000000e+00	2116/2151 (98%)
EPI493062	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 3 (PA)	3779.4	0.000000e+00	2117/2152 (98%)
EPI372959	A/Egypt/N10621/2011 (A/H5N1) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI372811	A/Egypt/N01982/2010 (A/H5N1) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI372871	A/Egypt/N0677/2011 (A/H5N1) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI372903	A/Egypt/N7562/2011 (A/H5N1) segment 3 (PA)	3762.7	0.000000e+00	2114/2152 (98%)
EPI294480	A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 3 (PA)	3762.7	0.000000e+00	2113/2151 (98%)
EPI493422	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 3 (PA)	3757.2	0.000000e+00	2112/2151 (98%)
EPI493402	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 3 (PA)	3757.2	0.000000e+00	2112/2151 (98%)
EPI493078	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 3 (PA)	3757.2	0.000000e+00	2112/2151 (98%)
EPI372731	A/Egypt/9174-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3751.7	0.000000e+00	2111/2151 (98%)
EPI372817	A/Egypt/N02038/2010 (A/H5N1) segment 3 (PA)	3746.1	0.000000e+00	2110/2151 (98%)
EPI372711	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3746.1	0.000000e+00	2110/2151 (98%)
EPI294466	A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 3 (PA)	3744.3	0.000000e+00	2107/2147 (98%)
EPI372705	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3740.6	0.000000e+00	2109/2151 (98%)
EPI372823	A/Egypt/N02127/2010 (A/H5N1) segment 3 (PA)	3736.9	0.000000e+00	2108/2151 (98%)
EPI372835	A/Egypt/N03071/2010 (A/H5N1) segment 3 (PA)	3729.5	0.000000e+00	2107/2151 (97%)
EPI549739	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI549738	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI372725	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI557166	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 3 (PA)	3718.4	0.000000e+00	2106/2152 (97%)
EPI372829	A/Egypt/N02554/2010 (A/H5N1) segment 3 (PA)	3718.4	0.000000e+00	2105/2151 (97%)
EPI557182	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI549737	A/chicken/Egypt/14VIR784-11-133AL/2013 (A/H5N1) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI493555	A/chicken/Egypt/Q1397D/2010 (A/H5N1) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI294650	A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 3 (PA)	3707.3	0.000000e+00	2097/2142 (97%)
EPI294573	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 3 (PA)	3705.5	0.000000e+00	2086/2126 (98%)
EPI372763	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3690.7	0.000000e+00	2100/2151 (97%)
EPI372749	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3690.7	0.000000e+00	2101/2152 (97%)
EPI538755	A/chicken/Egypt/13VIR-2962-24/2013 (A/H5N1) segment 3 (PA)	3687.0	0.000000e+00	2100/2152 (97%)
EPI372775	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3687.0	0.000000e+00	2099/2151 (97%)
EPI372769	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3685.2	0.000000e+00	2099/2151 (97%)
EPI294657	A/poultry/Egypt/3982-56/2010 (A/H5N1) segment 3 (PA)	3685.2	0.000000e+00	2083/2127 (97%)
EPI294608	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 3 (PA)	3676.0	0.000000e+00	2074/2116 (98%)
EPI372787	A/Egypt/3450-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3670.4	0.000000e+00	2096/2151 (97%)
EPI372693	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3668.6	0.000000e+00	2096/2151 (97%)
EPI372687	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3668.6	0.000000e+00	2096/2151 (97%)
EPI372577	A/Egypt/394-NAMRU3/2007 (A/H5N1) segment 3 (PA)	3668.6	0.000000e+00	2096/2151 (97%)
EPI294580	A/duck/Egypt/3982-12/2010 (A/H5N1) segment 3 (PA)	3664.9	0.000000e+00	2072/2116 (97%)
EPI372699	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3663.0	0.000000e+00	2095/2151 (97%)
EPI372681	A/Egypt/0606-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3663.0	0.000000e+00	2095/2151 (97%)
EPI372793	A/Egypt/N11981/2009 (A/H5N1) segment 3 (PA)	3657.5	0.000000e+00	2095/2152 (97%)
EPI372675	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 3 (PA)	3657.5	0.000000e+00	2094/2151 (97%)
EPI152047	A/chicken/Egypt/5169-2/2007 (A/H5N1) segment 3 (PA)	3657.5	0.000000e+00	2094/2151 (97%)
EPI58650	A/turkey/Egypt/2253-2/2006 (A/H5N1) segment 3 (PA)	3657.5	0.000000e+00	2094/2151 (97%)
EPI622508	A/chicken/Egypt/06553-NLQP/2006 (A/H5N1) segment 3 (PA)	3651.9	0.000000e+00	2093/2151 (97%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642540	A/Egypt/682/2015 (A/H5N1) segment 5 (NP)	2758.2	0.000000e+00	1497/1497 (100%)
EPI574126	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 5 (NP)	2752.6	0.000000e+00	1494/1497 (99%)
EPI574133	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 5 (NP)	2741.5	0.000000e+00	1492/1497 (99%)
EPI573253	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 5 (NP)	2728.6	0.000000e+00	1490/1497 (99%)
EPI584779	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 5 (NP)	2724.9	0.000000e+00	1489/1497 (99%)
EPI574382	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 5 (NP)	2724.9	0.000000e+00	1489/1497 (99%)
EPI550496	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 5 (NP)	2724.9	0.000000e+00	1489/1497 (99%)
EPI573261	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 5 (NP)	2719.4	0.000000e+00	1488/1497 (99%)
EPI557187	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 5 (NP)	2713.8	0.000000e+00	1487/1497 (99%)
EPI538800	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 5 (NP)	2708.3	0.000000e+00	1486/1497 (99%)
EPI538792	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 5 (NP)	2708.3	0.000000e+00	1486/1497 (99%)
EPI538784	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 5 (NP)	2708.3	0.000000e+00	1486/1497 (99%)
EPI538776	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 5 (NP)	2702.8	0.000000e+00	1485/1497 (99%)
EPI538768	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 5 (NP)	2702.8	0.000000e+00	1485/1497 (99%)
EPI493505	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 5 (NP)	2702.8	0.000000e+00	1485/1497 (99%)
EPI557203	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 5 (NP)	2697.2	0.000000e+00	1484/1497 (99%)
EPI557171	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 5 (NP)	2697.2	0.000000e+00	1484/1497 (99%)
EPI538760	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 5 (NP)	2697.2	0.000000e+00	1484/1497 (99%)
EPI557211	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 5 (NP)	2675.1	0.000000e+00	1480/1497 (98%)
EPI538816	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 5 (NP)	2669.5	0.000000e+00	1479/1497 (98%)
EPI493530	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 5 (NP)	2669.5	0.000000e+00	1479/1497 (98%)
EPI493431	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 5 (NP)	2669.5	0.000000e+00	1479/1497 (98%)
EPI493397	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 5 (NP)	2669.5	0.000000e+00	1479/1497 (98%)
EPI493557	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 5 (NP)	2664.0	0.000000e+00	1478/1497 (98%)
EPI493445	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 5 (NP)	2664.0	0.000000e+00	1478/1497 (98%)
EPI493349	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 5 (NP)	2664.0	0.000000e+00	1478/1497 (98%)
EPI557195	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 5 (NP)	2658.4	0.000000e+00	1477/1497 (98%)
EPI493355	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 5 (NP)	2658.4	0.000000e+00	1477/1497 (98%)
EPI493278	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 5 (NP)	2658.4	0.000000e+00	1477/1497 (98%)
EPI493193	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 5 (NP)	2658.4	0.000000e+00	1477/1497 (98%)
EPI493057	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 5 (NP)	2658.4	0.000000e+00	1477/1497 (98%)
EPI574374	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI550503	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1464/1479 (98%)
EPI493168	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI493126	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI372948	A/Egypt/N14976/2011 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI372940	A/Egypt/N11470/2011 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI372852	A/Egypt/N6322/2011 (A/H5N1) segment 5 (NP)	2652.9	0.000000e+00	1476/1497 (98%)
EPI493498	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI493470	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI493343	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI493206	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI493153	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI372924	A/Egypt/N09966/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI372884	A/Egypt/N6828/2011 (A/H5N1) segment 5 (NP)	2647.4	0.000000e+00	1475/1497 (98%)
EPI372932	A/Egypt/N11126/2011 (A/H5N1) segment 5 (NP)	2643.7	0.000000e+00	1474/1497 (98%)
EPI493362	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 5 (NP)	2641.8	0.000000e+00	1474/1497 (98%)
EPI372956	A/Egypt/N10621/2011 (A/H5N1) segment 5 (NP)	2641.8	0.000000e+00	1474/1497 (98%)
EPI493564	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI493417	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI493066	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI493034	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI372916	A/Egypt/N7724/2011 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI372860	A/Egypt/N6658/2011 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI372844	A/Egypt/N0544/2011 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI372808	A/Egypt/N01982/2010 (A/H5N1) segment 5 (NP)	2636.3	0.000000e+00	1473/1497 (98%)
EPI550482	A/chicken/Egypt/14VIR784-11-133AL/2013 (A/H5N1) segment 5 (NP)	2634.4	0.000000e+00	1472/1496 (98%)
EPI557163	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 5 (NP)	2630.7	0.000000e+00	1472/1497 (98%)
EPI372900	A/Egypt/N7562/2011 (A/H5N1) segment 5 (NP)	2630.7	0.000000e+00	1472/1497 (98%)
EPI372876	A/Egypt/N6774/2011 (A/H5N1) segment 5 (NP)	2630.7	0.000000e+00	1472/1497 (98%)
EPI557179	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 5 (NP)	2625.2	0.000000e+00	1471/1497 (98%)
EPI493423	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 5 (NP)	2625.2	0.000000e+00	1471/1497 (98%)
EPI493403	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 5 (NP)	2625.2	0.000000e+00	1471/1497 (98%)
EPI493079	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 5 (NP)	2625.2	0.000000e+00	1471/1497 (98%)
EPI538752	A/chicken/Egypt/13VIR-2962-24/2013 (A/H5N1) segment 5 (NP)	2619.7	0.000000e+00	1470/1497 (98%)
EPI372908	A/Egypt/N7592/2011 (A/H5N1) segment 5 (NP)	2619.7	0.000000e+00	1470/1497 (98%)
EPI372820	A/Egypt/N02127/2010 (A/H5N1) segment 5 (NP)	2619.7	0.000000e+00	1471/1498 (98%)
EPI372814	A/Egypt/N02038/2010 (A/H5N1) segment 5 (NP)	2619.7	0.000000e+00	1470/1497 (98%)
EPI550489	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 5 (NP)	2614.1	0.000000e+00	1469/1497 (98%)
EPI372868	A/Egypt/N0677/2011 (A/H5N1) segment 5 (NP)	2614.1	0.000000e+00	1469/1497 (98%)
EPI372728	A/Egypt/9174-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2614.1	0.000000e+00	1469/1497 (98%)
EPI372832	A/Egypt/N03071/2010 (A/H5N1) segment 5 (NP)	2608.6	0.000000e+00	1468/1497 (98%)
EPI372702	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2608.6	0.000000e+00	1468/1497 (98%)
EPI372722	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2603.0	0.000000e+00	1467/1497 (97%)
EPI372826	A/Egypt/N02554/2010 (A/H5N1) segment 5 (NP)	2586.4	0.000000e+00	1464/1497 (97%)
EPI372708	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2586.4	0.000000e+00	1464/1497 (97%)
EPI372696	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2586.4	0.000000e+00	1464/1497 (97%)
EPI372690	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2575.3	0.000000e+00	1462/1497 (97%)
EPI372684	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2575.3	0.000000e+00	1462/1497 (97%)
EPI372838	A/Egypt/N03072/2010 (A/H5N1) segment 5 (NP)	2569.8	0.000000e+00	1461/1497 (97%)
EPI372772	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2569.8	0.000000e+00	1461/1497 (97%)
EPI372766	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2569.8	0.000000e+00	1461/1497 (97%)
EPI294477	A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 5 (NP)	2569.8	0.000000e+00	1438/1462 (98%)
EPI538808	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 5 (NP)	2566.1	0.000000e+00	1410/1422 (99%)
EPI372796	A/Egypt/N01360/2010 (A/H5N1) segment 5 (NP)	2564.3	0.000000e+00	1460/1497 (97%)
EPI372672	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2564.3	0.000000e+00	1460/1497 (97%)
EPI372892	A/Egypt/N0423/2011 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1460/1498 (97%)
EPI372802	A/Egypt/N01644/2010 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1459/1497 (97%)
EPI372784	A/Egypt/3450-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1459/1497 (97%)
EPI372778	A/Egypt/4394-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1459/1497 (97%)
EPI372760	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1459/1497 (97%)
EPI372746	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2558.7	0.000000e+00	1459/1497 (97%)
EPI372790	A/Egypt/N11981/2009 (A/H5N1) segment 5 (NP)	2553.2	0.000000e+00	1458/1497 (97%)
EPI372754	A/Egypt/2752-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2542.1	0.000000e+00	1456/1497 (97%)
EPI372678	A/Egypt/0606-NAMRU3/2009 (A/H5N1) segment 5 (NP)	2540.3	0.000000e+00	1456/1497 (97%)
EPI294570	A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 5 (NP)	2531.0	0.000000e+00	1426/1455 (98%)
EPI372574	A/Egypt/394-NAMRU3/2007 (A/H5N1) segment 5 (NP)	2521.8	0.000000e+00	1452/1497 (96%)
EPI294577	A/duck/Egypt/3982-12/2010 (A/H5N1) segment 5 (NP)	2520.0	0.000000e+00	1424/1455 (97%)
EPI294605	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 5 (NP)	2508.9	0.000000e+00	1414/1443 (97%)
EPI294542	A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 5 (NP)	2505.2	0.000000e+00	1410/1438 (98%)

niman · September 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642541	A/Egypt/682/2015 (A/H5N1) segment 8 (NS)	1509.8	0.000000e+00	823/823 (100%)
EPI574136	A/Egypt/MOH-NRC-7305/2014 (A/H5N1) segment 8 (NS)	1504.3	0.000000e+00	819/823 (99%)
EPI574129	A/Egypt/MOH-NRC-7271/2014 (A/H5N1) segment 8 (NS)	1504.3	0.000000e+00	819/823 (99%)
EPI573254	A/Duck/Egypt/AR236-A3NLQP/2015 (A/H5N1) segment 8 (NS)	1504.3	0.000000e+00	819/823 (99%)
EPI584782	A/chicken/Egypt/A10351A/2014 (A/H5N1) segment 8 (NS)	1498.8	0.000000e+00	818/823 (99%)
EPI557172	A/chicken/Egypt/NLQP33SD-AR748/2013 (A/H5N1) segment 8 (NS)	1498.8	0.000000e+00	818/823 (99%)
EPI573262	A/Turkey/Egypt/AR238-SD177NLQP/2014 (A/H5N1) segment 8 (NS)	1493.2	0.000000e+00	817/823 (99%)
EPI557188	A/Duck/Egypt/NLQP27SG-AR750/2013 (A/H5N1) segment 8 (NS)	1493.2	0.000000e+00	817/823 (99%)
EPI493448	A/chicken/Egypt/M7217B/2013 (A/H5N1) segment 8 (NS)	1487.7	0.000000e+00	816/823 (99%)
EPI538809	A/chicken/Egypt/13VIR-2962-203/2013 (A/H5N1) segment 8 (NS)	1484.0	0.000000e+00	810/815 (99%)
EPI538801	A/chicken/Egypt/13VIR-2962-200/2013 (A/H5N1) segment 8 (NS)	1484.0	0.000000e+00	810/815 (99%)
EPI538793	A/chicken/Egypt/13VIR-2962-199/2013 (A/H5N1) segment 8 (NS)	1484.0	0.000000e+00	810/815 (99%)
EPI557212	A/chicken/Egypt/NLQP139V-AR753/2013 (A/H5N1) segment 8 (NS)	1482.1	0.000000e+00	815/823 (99%)
EPI557196	A/chicken/Egypt/NLQP20SL-AR751/2013 (A/H5N1) segment 8 (NS)	1482.1	0.000000e+00	815/823 (99%)
EPI550504	A/duck/Egypt/14VIR784-6-1328S/2013 (A/H5N1) segment 8 (NS)	1482.1	0.000000e+00	815/823 (99%)
EPI538785	A/chicken/Egypt/13VIR-2962-198/2013 (A/H5N1) segment 8 (NS)	1480.3	0.000000e+00	808/813 (99%)
EPI557204	A/chicken/Egypt/NLQP639V-AR752/2013 (A/H5N1) segment 8 (NS)	1476.6	0.000000e+00	814/823 (98%)
EPI507243	A/chicken/Egypt/IT-2/2013 (A/H5N1) segment 8 (NS)	1476.6	0.000000e+00	814/823 (98%)
EPI507242	A/chicken/Egypt/IT-1/2013 (A/H5N1) segment 8 (NS)	1476.6	0.000000e+00	814/823 (98%)
EPI372925	A/Egypt/N09966/2011 (A/H5N1) segment 8 (NS)	1476.6	0.000000e+00	814/823 (98%)
EPI538761	A/chicken/Egypt/13VIR-2962-109/2013 (A/H5N1) segment 8 (NS)	1472.9	0.000000e+00	808/815 (99%)
EPI493508	A/chicken/Egypt/Q5283C/2012 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493473	A/goose/Egypt/M2794E/2011 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493419	A/duck/Egypt/Q4596D/2012 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493365	A/goose/Egypt/M2788E/2011 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493344	A/goose/Egypt/M2794A/2011 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493208	A/goose/Egypt/M2788A/2011 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493171	A/duck/Egypt/Q4596A/2012 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493156	A/duck/Egypt/Q4596B/2012 (A/H5N1) segment 8 (NS)	1471.1	0.000000e+00	813/823 (98%)
EPI493434	A/chicken/Egypt/S3280E/2011 (A/H5N1) segment 8 (NS)	1465.5	0.000000e+00	812/823 (98%)
EPI493351	A/chicken/Egypt/S3280B/2011 (A/H5N1) segment 8 (NS)	1465.5	0.000000e+00	812/823 (98%)
EPI398180	A/chicken/Giza/CAI26/2011 (A/H5) segment 8 (NS)	1465.5	0.000000e+00	812/823 (98%)
EPI550497	A/duck/Egypt/14VIR784-4-133AD/2013 (A/H5N1) segment 8 (NS)	1463.7	0.000000e+00	799/804 (99%)
EPI538817	A/chicken/Egypt/13VIR-2962-204/2013 (A/H5N1) segment 8 (NS)	1460.0	0.000000e+00	805/814 (98%)
EPI493533	A/duck/Egypt/Q2645C/2010 (A/H5N1) segment 8 (NS)	1460.0	0.000000e+00	811/823 (98%)
EPI493399	A/chicken/Egypt/S3280D/2011 (A/H5N1) segment 8 (NS)	1460.0	0.000000e+00	811/823 (98%)
EPI538769	A/duck/Egypt/13VIR-2962-195/2013 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	804/814 (98%)
EPI493560	A/chicken/Egypt/M2773A/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI493358	A/duck/Egypt/M2583D/2010 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI493329	A/duck/Egypt/M2583A/2010 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI493196	A/duck/Egypt/M2583B/2010 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI493059	A/duck/Egypt/M2583C/2010 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372957	A/Egypt/N10621/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372949	A/Egypt/N14976/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372941	A/Egypt/N11470/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372933	A/Egypt/N11126/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372869	A/Egypt/N0677/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372861	A/Egypt/N6658/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372853	A/Egypt/N6322/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI372845	A/Egypt/N0544/2011 (A/H5N1) segment 8 (NS)	1454.4	0.000000e+00	810/823 (98%)
EPI538777	A/duck/Egypt/13VIR-2962-196/2013 (A/H5N1) segment 8 (NS)	1452.6	0.000000e+00	803/813 (98%)
EPI574383	A/Turkey/Egypt/14240FAOS/2014 (A/H5N1) segment 8 (NS)	1450.7	0.000000e+00	794/800 (99%)
EPI574375	A/Turkey/Egypt/14139FAOS/2014 (A/H5N1) segment 8 (NS)	1450.7	0.000000e+00	794/800 (99%)
EPI557180	A/chicken/Egypt/NLQP2AL-AR749/2013 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI557164	A/chicken/Egypt/NLQP7FL-AR747/2013 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI493501	A/chicken/Egypt/S2938D/2011 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI493128	A/duck/Egypt/M3075B/2011 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI372909	A/Egypt/N7592/2011 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI372885	A/Egypt/N6828/2011 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI372877	A/Egypt/N6774/2011 (A/H5N1) segment 8 (NS)	1448.9	0.000000e+00	809/823 (98%)
EPI550483	A/chicken/Egypt/14VIR784-11-133AL/2013 (A/H5N1) segment 8 (NS)	1443.4	0.000000e+00	808/823 (98%)
EPI372833	A/Egypt/N03071/2010 (A/H5N1) segment 8 (NS)	1443.4	0.000000e+00	808/823 (98%)
EPI372827	A/Egypt/N02554/2010 (A/H5N1) segment 8 (NS)	1443.4	0.000000e+00	808/823 (98%)
EPI372815	A/Egypt/N02038/2010 (A/H5N1) segment 8 (NS)	1443.4	0.000000e+00	808/823 (98%)
EPI493567	A/duck/Egypt/S6419C/2012 (A/H5N1) segment 8 (NS)	1441.5	0.000000e+00	807/822 (98%)
EPI493037	A/turkey/Egypt/S6405A/2012 (A/H5N1) segment 8 (NS)	1441.5	0.000000e+00	807/822 (98%)
EPI493426	A/chicken/Egypt/S3806B/2011 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI493406	A/chicken/Egypt/S3802B/2011 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI493124	A/chicken/Egypt/S3806D/2011 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372917	A/Egypt/N7724/2011 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372901	A/Egypt/N7562/2011 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372821	A/Egypt/N02127/2010 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372809	A/Egypt/N01982/2010 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372723	A/Egypt/9539-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI372709	A/Egypt/9538-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1437.8	0.000000e+00	807/823 (98%)
EPI493069	A/chicken/Egypt/S3093A/2011 (A/H5N1) segment 8 (NS)	1432.3	0.000000e+00	806/823 (97%)
EPI372703	A/Egypt/0585-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1432.3	0.000000e+00	806/823 (97%)
EPI538753	A/chicken/Egypt/13VIR-2962-24/2013 (A/H5N1) segment 8 (NS)	1423.0	0.000000e+00	797/812 (98%)
EPI294648	A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 8 (NS)	1421.2	0.000000e+00	794/808 (98%)
EPI372767	A/Egypt/3228-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1415.7	0.000000e+00	803/823 (97%)
EPI372697	A/Egypt/0001-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1415.7	0.000000e+00	803/823 (97%)
EPI372691	A/Egypt/2039-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1415.7	0.000000e+00	803/823 (97%)
EPI372685	A/Egypt/1310-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1415.7	0.000000e+00	803/823 (97%)
EPI372803	A/Egypt/N01644/2010 (A/H5N1) segment 8 (NS)	1410.1	0.000000e+00	802/823 (97%)
EPI372791	A/Egypt/N11981/2009 (A/H5N1) segment 8 (NS)	1410.1	0.000000e+00	802/823 (97%)
EPI372773	A/Egypt/4396-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1410.1	0.000000e+00	802/823 (97%)
EPI372747	A/Egypt/4935-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1410.1	0.000000e+00	802/823 (97%)
EPI294578	A/duck/Egypt/3982-12/2010 (A/H5N1) segment 8 (NS)	1410.1	0.000000e+00	792/808 (98%)
EPI372839	A/Egypt/N03072/2010 (A/H5N1) segment 8 (NS)	1404.6	0.000000e+00	801/823 (97%)
EPI372673	A/Egypt/0605-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1404.6	0.000000e+00	803/825 (97%)
EPI294478	A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 8 (NS)	1400.9	0.000000e+00	787/803 (98%)
EPI372797	A/Egypt/N01360/2010 (A/H5N1) segment 8 (NS)	1399.0	0.000000e+00	801/824 (97%)
EPI372761	A/Egypt/2563-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1399.0	0.000000e+00	800/823 (97%)
EPI294464	A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 8 (NS)	1395.3	0.000000e+00	786/803 (97%)
EPI372779	A/Egypt/4394-NAMRU3/2009 (A/H5N1) segment 8 (NS)	1393.5	0.000000e+00	799/823 (97%)
EPI550490	A/chicken/Egypt/14VIR784-5-1318S/2013 (A/H5N1) segment 8 (NS)	1391.6	0.000000e+00	792/813 (97%)
EPI123486	A/herring gull/Sweden/V1116/06 (A/H5N1) segment 8 (NS)	1388.0	0.000000e+00	798/823 (96%)
EPI58628	A/chicken/Egypt/2253-1/2006 (A/H5N1) segment 8 (NS)	1388.0	0.000000e+00	798/823 (96%)
EPI294627	A/chicken/Egypt/3982-44/2010 (A/H5N1) segment 8 (NS)	1386.1	0.000000e+00	787/807 (97%)
EPI294606	A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 8 (NS)	1386.1	0.000000e+00	779/795 (97%)

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Egypt 2015 H5N1 Case Matches Prior Human Sequences

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