niman Posted May 26, 2016 Report Share Posted May 26, 2016 Federal University of Rio de Janeiro has released partial Zika sequences from Brazil cases infected via transfusions. Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 (edited) LOCUS KX173840 927 bp RNA linear VRL 06-MAY-2016 DEFINITION Zika virus isolate 16Z10 envelope protein gene, partial cds. ACCESSION KX173840 VERSION KX173840.1 GI:1026288127 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 927) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Transmission of Zika Virus by Platelet Transfusion JOURNAL Unpublished REFERENCE 2 (bases 1 to 927) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Direct Submission JOURNAL Submitted (03-MAY-2016) Genetics Dept. and Clementino Fraga Filho University Hospital, Federal University of Rio de Janeiro, Rio de Janeiro, RJ 21942-901, Brazil COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.0.0; BioEdit v. 7.2.5 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..927 /organism="Zika virus" /mol_type="genomic RNA" /isolate="16Z10" /isolation_source="plasma" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="16-Jan-2016" CDS <1..>927 /codon_start=1 /product="envelope protein" /protein_id="ANC90420.1" /db_xref="GI:1026288128" /translation="LVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVT VMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQY VCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQH SGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTM NNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGA VHTALAGALEAEMDGAKGRLSSGHLKCRLKMDK" ORIGIN 1 ttggtcatga tactgctgat tgccccggca tatagcatca ggtgcatagg agtcagcaat 61 agggactttg tggaaggtat gtcaggtggg acttgggttg atgttgtctt ggaacatgga 121 ggttgtgtca ccgtaatggc acaggacaaa ccgactgtcg acatagagct ggttacaaca 181 acagtcagca acatggcgga ggtaagatcc tactgctatg aggcatcaat atcagacatg 241 gcttcggaca gccgctgccc aacacaaggt gaagcctacc ttgacaagca atcagacact 301 caatatgtct gcaaaagaac gttagtggac agaggctggg gaaatggatg tggacttttt 361 ggcaaaggga gcctggtgac atgcgctaag tttgcatgct ccaagaaaat gaccgggaag 421 agcatccagc cagagaatct ggagtaccgg ataatgctgt cagttcatgg ctcccagcac 481 agtgggatga tcgttaatga cacaggacat gaaactgatg agaatagagc gaaggttgag 541 ataacgccca attcaccgag agccgaagcc accctggggg gttttggaag cctaggactt 601 gattgtgaac cgaggacagg ccttgacttt tcagatttgt attacttgac tatgaataac 661 aagcactggt tggttcacaa ggagtggttc cacgacattc cattaccttg gcacgctggg 721 gcagacaccg gaactccaca ctggaacaac aaagaagcac tggtagagtt caaggacgca 781 catgccaaaa ggcaaactgt cgtggttcta gggagtcaag aaggagcagt tcacacggcc 841 cttgctggag ctctggaggc tgagatggat ggtgcaaagg gaaggctgtc ctctggccac 901 ttgaaatgtc gcctgaaaat ggataaahttp://www.ncbi.nlm.nih.gov/nuccore/KX173840.1 Edited May 26, 2016 by niman Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX173841.1|Zika virus isolate 16Z11 envelope protein gene, partial cds16731673100%0.0100%KX173841.1Select seq gb|KX173840.1|Zika virus isolate 16Z10 envelope protein gene, partial cds16731673100%0.0100%KX173840.1Select seq gb|KX262887.1|Zika virus isolate 103451, complete genome16631663100%0.099%KX262887.1Select seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome16631663100%0.099%KU870645.1Select seq gb|KX253996.1|Zika virus isolate ZKC2/2016, complete genome16581658100%0.099%KX253996.1Select seq gb|KX247632.1|Zika virus isolate MEX_I_7 polyprotein gene, complete cds16581658100%0.099%KX247632.1Select seq gb|KX087101.2|Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome16581658100%0.099%KX087101.2Select seq gb|KX185891.1|Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds16581658100%0.099%KX185891.1Select seq gb|KU937936.1|Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds16581658100%0.099%KU937936.1Select seq gb|KX117076.1|Zika virus isolate Zhejiang04, complete genome16581658100%0.099%KX117076.1Select seq gb|KX051563.1|Zika virus isolate Haiti/1/2016, complete genome16581658100%0.099%KX051563.1Select seq gb|KU509998.3|Zika virus strain Haiti/1225/2014, complete genome16581658100%0.099%KU509998.3Select seq gb|KU963796.1|Zika virus isolate SZ-WIV01 polyprotein gene, complete cds16581658100%0.099%KU963796.1Select seq gb|KU991811.1|Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds16581658100%0.099%KU991811.1Select seq gb|KU940228.1|Zika virus isolate Bahia07, partial genome16581658100%0.099%KU940228.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds16581658100%0.099%KU955589.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome16581658100%0.099%KU922960.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds16581658100%0.099%KU866423.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome16581658100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome16581658100%0.099%KU853012.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome16581658100%0.099%KU820899.2Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds16581658100%0.099%KU729218.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome16581658100%0.099%KU527068.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds16581658100%0.099%KU647676.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome16581658100%0.099%KU501215.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds16581658100%0.099%KU365778.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds16581658100%0.099%KU312314.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds16581658100%0.099%KJ776791.1Select seq gb|KX247646.1|Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome16541654100%0.099%KX247646.1Select seq gb|KX198135.1|Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome16541654100%0.099%KX198135.1Select seq gb|KX197192.1|Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome16541654100%0.099%KX197192.1Select seq gb|KX156776.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome16541654100%0.099%KX156776.1Select seq gb|KX156775.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome16541654100%0.099%KX156775.1Select seq gb|KX156774.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome16541654100%0.099%KX156774.1Select seq gb|KX101060.1|Zika virus isolate Bahia02, partial genome16541654100%0.099%KX101060.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome16541654100%0.099%KU926310.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome16541654100%0.099%KU926309.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome16541654100%0.099%KU922923.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds16541654100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds16541654100%0.099%KU501216.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome16541654100%0.099%KU321639.1Select seq gb|KU940224.1|Zika virus isolate Bahia09, partial genome16511651100%0.099%KU940224.1Select seq gb|KU820897.2|Zika virus isolate FLR polyprotein gene, complete cds16491649100%0.099%KU820897.2Select seq gb|KX087102.1|Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome16491649100%0.099%KX087102.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds16491649100%0.099%KU820898.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds16491649100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds16491649100%0.099%KU761564.1Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome16491649100%0.099%KU497555.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome16491649100%0.099%KU707826.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds16491649100%0.099%KU365780.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds16491649100%0.099%KU365779.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds16491649100%0.099%KU365777.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds16491649100%0.099%KU312313.1Select seq gb|KX056898.1|Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds16451645100%0.099%KX056898.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds16451645100%0.099%KU955590.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds16451645100%0.099%KU729217.2Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome16451645100%0.099%KU681081.3Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds16451645100%0.099%KU312312.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome16361636100%0.099%KU744693.1Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome16311631100%0.099%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds16311631100%0.099%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds16271627100%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds16221622100%0.099%EU545988.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds1613161397%0.099%KU312315.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1602160299%0.098%KU681082.3Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds1599159996%0.099%KU646828.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds1590159096%0.099%KJ634273.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds1584158496%0.099%KU646827.1Select seq gb|KX173843.1|Zika virus isolate 16Z62 envelope protein gene, partial cds1516151690%0.099%KX173843.1Select seq gb|KX173844.1|Zika virus isolate 16Z62 envelope protein gene, partial cds1510151090%0.099%KX173844.1Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds14981498100%0.096%HQ234499.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1238123899%0.090%KF268950.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1238123899%0.090%KF268948.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1214121499%0.089%KU955595.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1214121499%0.089%KF383116.1Select seq gb|KX198134.1|Zika virus strain ZIKV/Aedes africanus/SEN/DAK-AR-41524_A1C1-V2/1984, complete genome1211121199%0.089%KX198134.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1211121199%0.089%KU955592.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1211121199%0.089%KU955591.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds1211121199%0.089%HQ234501.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1193119399%0.089%KU720415.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds1193119399%0.089%KF383121.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1193119399%0.089%KF383119.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds1193119399%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1180118099%0.088%KF383115.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1178117899%0.088%LC002520.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1177117799%0.088%KF268949.1Select seq gb|KU963574.1|Zika virus isolate ZIKV/Homo sapiens/NGA/IbH-30656_SM21V1-V3/1968 polyprotein (GP1) gene, complete cds1173117399%0.088%KU963574.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds1173117399%0.088%HQ234500.1Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1169116999%0.088%KF383117.1Select seq gb|KU963573.1|Zika virus isolate ZIKV/Macaca mulatta/UGA/MR-766_SM150-V8/1947 polyprotein (GP1) gene, complete cds1162116299%0.088%KU963573.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1159115999%0.088%KU955594.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1159115999%0.087%DQ859059.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1159115999%0.088%AY632535.2Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1106110699%0.087%KF383118.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence1011101199%0.084%KF383120.1Select seq gb|KX101061.1|Zika virus isolate Bahia03, partial genome874136782%0.099%KX101061.1Select seq gb|KX101066.1|Zika virus isolate Bahia01, partial genome870136281%0.099%KX101066.1Select seq gb|KF270886.1|Zika virus strain CCB-870 envelope glycoprotein gene, partial cds67267257%0.088%KF270886.1Select seq gb|KU985088.1|Zika virus isolate MEX/InDRE/Zika-2/2015 envelope protein gene, partial cds64564538%0.099%KU985088.1 Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Map Update https://www.google.com/maps/d/u/0/edit?hl=en&mid=1XSxKe6FIecV8f33cQwyc7uylxeU Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 LOCUS KX173841 927 bp RNA linear VRL 06-MAY-2016 DEFINITION Zika virus isolate 16Z11 envelope protein gene, partial cds. ACCESSION KX173841 VERSION KX173841.1 GI:1026288129 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 927) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Transmission of Zika Virus by Platelet Transfusion JOURNAL Unpublished REFERENCE 2 (bases 1 to 927) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Direct Submission JOURNAL Submitted (03-MAY-2016) Genetics Dept. and Clementino Fraga Filho University Hospital, Federal University of Rio de Janeiro, Rio de Janeiro, RJ 21942-901, Brazil COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.0.0; BioEdit v. 7.2.5 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..927 /organism="Zika virus" /mol_type="genomic RNA" /isolate="16Z11" /isolation_source="plasma" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="25-Jan-2016" CDS <1..>927 /codon_start=1 /product="envelope protein" /protein_id="ANC90421.1" /db_xref="GI:1026288130" /translation="LVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVT VMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQY VCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQH SGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTM NNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGA VHTALAGALEAEMDGAKGRLSSGHLKCRLKMDK" ORIGIN 1 ttggtcatga tactgctgat tgccccggca tatagcatca ggtgcatagg agtcagcaat 61 agggactttg tggaaggtat gtcaggtggg acttgggttg atgttgtctt ggaacatgga 121 ggttgtgtca ccgtaatggc acaggacaaa ccgactgtcg acatagagct ggttacaaca 181 acagtcagca acatggcgga ggtaagatcc tactgctatg aggcatcaat atcagacatg 241 gcttcggaca gccgctgccc aacacaaggt gaagcctacc ttgacaagca atcagacact 301 caatatgtct gcaaaagaac gttagtggac agaggctggg gaaatggatg tggacttttt 361 ggcaaaggga gcctggtgac atgcgctaag tttgcatgct ccaagaaaat gaccgggaag 421 agcatccagc cagagaatct ggagtaccgg ataatgctgt cagttcatgg ctcccagcac 481 agtgggatga tcgttaatga cacaggacat gaaactgatg agaatagagc gaaggttgag 541 ataacgccca attcaccgag agccgaagcc accctggggg gttttggaag cctaggactt 601 gattgtgaac cgaggacagg ccttgacttt tcagatttgt attacttgac tatgaataac 661 aagcactggt tggttcacaa ggagtggttc cacgacattc cattaccttg gcacgctggg 721 gcagacaccg gaactccaca ctggaacaac aaagaagcac tggtagagtt caaggacgca 781 catgccaaaa ggcaaactgt cgtggttcta gggagtcaag aaggagcagt tcacacggcc 841 cttgctggag ctctggaggc tgagatggat ggtgcaaagg gaaggctgtc ctctggccac 901 ttgaaatgtc gcctgaaaat ggataaa Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX173841.1|Zika virus isolate 16Z11 envelope protein gene, partial cds16731673100%0.0100%KX173841.1Select seq gb|KX173840.1|Zika virus isolate 16Z10 envelope protein gene, partial cds16731673100%0.0100%KX173840.1Select seq gb|KX262887.1|Zika virus isolate 103451, complete genome16631663100%0.099%KX262887.1Select seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome16631663100%0.099%KU870645.1Select seq gb|KX253996.1|Zika virus isolate ZKC2/2016, complete genome16581658100%0.099%KX253996.1Select seq gb|KX247632.1|Zika virus isolate MEX_I_7 polyprotein gene, complete cds16581658100%0.099%KX247632.1Select seq gb|KX087101.2|Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome16581658100%0.099%KX087101.2Select seq gb|KX185891.1|Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds16581658100%0.099%KX185891.1Select seq gb|KU937936.1|Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds16581658100%0.099%KU937936.1Select seq gb|KX117076.1|Zika virus isolate Zhejiang04, complete genome16581658100%0.099%KX117076.1Select seq gb|KX051563.1|Zika virus isolate Haiti/1/2016, complete genome16581658100%0.099%KX051563.1Select seq gb|KU509998.3|Zika virus strain Haiti/1225/2014, complete genome16581658100%0.099%KU509998.3Select seq gb|KU963796.1|Zika virus isolate SZ-WIV01 polyprotein gene, complete cds16581658100%0.099%KU963796.1Select seq gb|KU991811.1|Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds16581658100%0.099%KU991811.1Select seq gb|KU940228.1|Zika virus isolate Bahia07, partial genome16581658100%0.099%KU940228.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds16581658100%0.099%KU955589.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome16581658100%0.099%KU922960.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds16581658100%0.099%KU866423.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome16581658100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome16581658100%0.099%KU853012.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome16581658100%0.099%KU820899.2Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds16581658100%0.099%KU729218.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome16581658100%0.099%KU527068.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds16581658100%0.099%KU647676.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome16581658100%0.099%KU501215.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds16581658100%0.099%KU365778.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds16581658100%0.099%KU312314.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds16581658100%0.099%KJ776791.1Select seq gb|KX247646.1|Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome16541654100%0.099%KX247646.1Select seq gb|KX198135.1|Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome16541654100%0.099%KX198135.1Select seq gb|KX197192.1|Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome16541654100%0.099%KX197192.1Select seq gb|KX156776.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome16541654100%0.099%KX156776.1Select seq gb|KX156775.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome16541654100%0.099%KX156775.1Select seq gb|KX156774.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome16541654100%0.099%KX156774.1Select seq gb|KX101060.1|Zika virus isolate Bahia02, partial genome16541654100%0.099%KX101060.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome16541654100%0.099%KU926310.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome16541654100%0.099%KU926309.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome16541654100%0.099%KU922923.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds16541654100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds16541654100%0.099%KU501216.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome16541654100%0.099%KU321639.1Select seq gb|KU940224.1|Zika virus isolate Bahia09, partial genome16511651100%0.099%KU940224.1Select seq gb|KU820897.2|Zika virus isolate FLR polyprotein gene, complete cds16491649100%0.099%KU820897.2Select seq gb|KX087102.1|Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome16491649100%0.099%KX087102.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds16491649100%0.099%KU820898.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds16491649100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds16491649100%0.099%KU761564.1Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome16491649100%0.099%KU497555.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome16491649100%0.099%KU707826.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds16491649100%0.099%KU365780.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds16491649100%0.099%KU365779.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds16491649100%0.099%KU365777.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds16491649100%0.099%KU312313.1Select seq gb|KX056898.1|Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds16451645100%0.099%KX056898.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds16451645100%0.099%KU955590.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds16451645100%0.099%KU729217.2Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome16451645100%0.099%KU681081.3Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds16451645100%0.099%KU312312.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome16361636100%0.099%KU744693.1Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome16311631100%0.099%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds16311631100%0.099%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds16271627100%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds16221622100%0.099%EU545988.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds1613161397%0.099%KU312315.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1602160299%0.098%KU681082.3Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds1599159996%0.099%KU646828.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds1590159096%0.099%KJ634273.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds1584158496%0.099%KU646827.1Select seq gb|KX173843.1|Zika virus isolate 16Z62 envelope protein gene, partial cds1516151690%0.099%KX173843.1Select seq gb|KX173844.1|Zika virus isolate 16Z62 envelope protein gene, partial cds1510151090%0.099%KX173844.1Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds14981498100%0.096%HQ234499.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1238123899%0.090%KF268950.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1238123899%0.090%KF268948.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1214121499%0.089%KU955595.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1214121499%0.089%KF383116.1Select seq gb|KX198134.1|Zika virus strain ZIKV/Aedes africanus/SEN/DAK-AR-41524_A1C1-V2/1984, complete genome1211121199%0.089%KX198134.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1211121199%0.089%KU955592.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1211121199%0.089%KU955591.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds1211121199%0.089%HQ234501.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1193119399%0.089%KU720415.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds1193119399%0.089%KF383121.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1193119399%0.089%KF383119.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds1193119399%0.089%HQ234498.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1180118099%0.088%KF383115.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1178117899%0.088%LC002520.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1177117799%0.088%KF268949.1Select seq gb|KU963574.1|Zika virus isolate ZIKV/Homo sapiens/NGA/IbH-30656_SM21V1-V3/1968 polyprotein (GP1) gene, complete cds1173117399%0.088%KU963574.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds1173117399%0.088%HQ234500.1Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1169116999%0.088%KF383117.1Select seq gb|KU963573.1|Zika virus isolate ZIKV/Macaca mulatta/UGA/MR-766_SM150-V8/1947 polyprotein (GP1) gene, complete cds1162116299%0.088%KU963573.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1159115999%0.088%KU955594.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1159115999%0.087%DQ859059.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1159115999%0.088%AY632535.2Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1106110699%0.087%KF383118.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence1011101199%0.084%KF383120.1Select seq gb|KX101061.1|Zika virus isolate Bahia03, partial genome874136782%0.099%KX101061.1Select seq gb|KX101066.1|Zika virus isolate Bahia01, partial genome870136281%0.099%KX101066.1Select seq gb|KF270886.1|Zika virus strain CCB-870 envelope glycoprotein gene, partial cds67267257%0.088%KF270886.1Select seq gb|KU985088.1|Zika virus isolate MEX/InDRE/Zika-2/2015 envelope protein gene, partial cds64564538%0.099%KU985088.1 Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Map Updatehttps://www.google.com/maps/d/u/0/edit?hl=en&mid=1XSxKe6FIecV8f33cQwyc7uylxeU Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 LOCUS KX173842 329 bp RNA linear VRL 06-MAY-2016 DEFINITION Zika virus isolate 16Z08 envelope protein gene, partial cds. ACCESSION KX173842 VERSION KX173842.1 GI:1026288131 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 329) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Transmission of Zika Virus by Platelet Transfusion JOURNAL Unpublished REFERENCE 2 (bases 1 to 329) AUTHORS Motta,I.J.F., Spencer,B.R., Silva,S.G.C., Arruda,M.B., Dobbin,J.A., Gonzaga,Y.B.M., Arcuri,I.P., Tavares,R.C.B.S., Atta,E.H., Fernandes,R.F.M., Costa,D.A., Ribeiro,L.J., Limonte,F., Higa,L.M., Voloch,C.M., Brindeiro,R.M., Tanuri,A. and Ferreira,O.C. Jr. TITLE Direct Submission JOURNAL Submitted (03-MAY-2016) Genetics Dept. and Clementino Fraga Filho University Hospital, Federal University of Rio de Janeiro, Rio de Janeiro, RJ 21942-901, Brazil COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.0.0; BioEdit v. 7.2.5 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..329 /organism="Zika virus" /mol_type="genomic RNA" /isolate="16Z08" /isolation_source="plasma" /host="Homo sapiens" /db_xref="taxon:64320" /country="Brazil" /collection_date="11-Feb-2016" CDS <1..>329 /codon_start=1 /product="envelope protein" /protein_id="ANC90422.1" /db_xref="GI:1026288132" /translation="LVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVT VMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQY VCKRTLV" ORIGIN 1 ttggtcatga tactgctgat tgccccggca tatagcatca ggtgcatagg agtcagcaat 61 agggactttg tggaaggtat gtcaggtggg acttgggttg atgttgtctt ggaacatgga 121 ggttgtgtca ccgtaatggc acaggacaaa ccgactgtcg acatagagct ggttacaaca 181 acagtcagca acatggcgga ggtaagatcc tactgctatg aggcatcaat atcagacatg 241 gcttcggaca gccgctgccc aacacaaggt gaagcctacc ttgacaagca atcagacact 301 caatatgtct gcaaaagaac gttagtgga Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX173842.1|Zika virus isolate 16Z08 envelope protein gene, partial cds594594100%3e-166100%KX173842.1Select seq gb|KX173841.1|Zika virus isolate 16Z11 envelope protein gene, partial cds594594100%3e-166100%KX173841.1Select seq gb|KX173840.1|Zika virus isolate 16Z10 envelope protein gene, partial cds594594100%3e-166100%KX173840.1Select seq gb|KX198135.1|Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome589589100%1e-16499%KX198135.1Select seq gb|KU937936.1|Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds589589100%1e-16499%KU937936.1Select seq gb|KX101060.1|Zika virus isolate Bahia02, partial genome589589100%1e-16499%KX101060.1Select seq gb|KX051563.1|Zika virus isolate Haiti/1/2016, complete genome589589100%1e-16499%KX051563.1Select seq gb|KU509998.3|Zika virus strain Haiti/1225/2014, complete genome589589100%1e-16499%KU509998.3Select seq gb|KU940228.1|Zika virus isolate Bahia07, partial genome589589100%1e-16499%KU940228.1Select seq gb|KU940224.1|Zika virus isolate Bahia09, partial genome589589100%1e-16499%KU940224.1Select seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome589589100%1e-16499%KU870645.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome589589100%1e-16499%KU922960.1Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds589589100%1e-16499%KU820898.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds589589100%1e-16499%KU740184.2Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome589589100%1e-16499%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome589589100%1e-16499%KU853012.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds589589100%1e-16499%KU729218.1Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds589589100%1e-16499%KU761564.1Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome589589100%1e-16499%KU527068.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds589589100%1e-16499%KU647676.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds589589100%1e-16499%KU365778.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds589589100%1e-16499%KU312314.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds589589100%1e-16499%KU312313.1Select seq dbj|AB908162.1|Zika virus gene for polyprotein, partial cds, strain: ZIKV Hu/Tahiti/01u/2014NIID589589100%1e-16499%AB908162.1Select seq gb|KU820897.2|Zika virus isolate FLR polyprotein gene, complete cds585585100%2e-16399%KU820897.2Select seq gb|KX087101.2|Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome585585100%2e-16399%KX087101.2Select seq gb|KX197192.1|Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome585585100%2e-16399%KX197192.1Select seq gb|KX185891.1|Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds585585100%2e-16399%KX185891.1Select seq gb|KX156776.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome585585100%2e-16399%KX156776.1Select seq gb|KX156775.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome585585100%2e-16399%KX156775.1Select seq gb|KX156774.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome585585100%2e-16399%KX156774.1Select seq gb|KX117076.1|Zika virus isolate Zhejiang04, complete genome585585100%2e-16399%KX117076.1Select seq gb|KX087102.1|Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome585585100%2e-16399%KX087102.1Select seq gb|KX056898.1|Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds585585100%2e-16399%KX056898.1Select seq gb|KU963796.1|Zika virus isolate SZ-WIV01 polyprotein gene, complete cds585585100%2e-16399%KU963796.1Select seq gb|KU991811.1|Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds585585100%2e-16399%KU991811.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds585585100%2e-16399%KU955590.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds585585100%2e-16399%KU955589.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome585585100%2e-16399%KU926310.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome585585100%2e-16399%KU926309.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome585585100%2e-16399%KU922923.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds585585100%2e-16399%KU866423.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome585585100%2e-16399%KU820899.2Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome585585100%2e-16399%KU497555.1Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome585585100%2e-16399%KU707826.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds585585100%2e-16399%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds585585100%2e-16399%KU501216.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome585585100%2e-16399%KU501215.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds585585100%2e-16399%KU365780.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds585585100%2e-16399%KU365779.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds585585100%2e-16399%KU365777.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds585585100%2e-16399%KU312312.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome585585100%2e-16399%KU321639.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds585585100%2e-16399%KJ776791.1Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome580580100%8e-16299%KU955593.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome580580100%8e-16299%KU681081.3Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome580580100%8e-16299%KU744693.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds580580100%8e-16299%KF993678.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds580580100%8e-16299%JN860885.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds576576100%9e-16199%KU729217.2Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds567567100%5e-15898%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome56556599%2e-15798%KU681082.3Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds562562100%2e-15698%KU686218.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds54754793%5e-15299%KU312315.1Select seq gb|KU940227.1|Zika virus isolate Bahia08, partial genome54554593%2e-15199%KU940227.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds52952989%1e-146100%KU646828.1Select seq gb|KM212966.1|Zika virus isolate NC13(FP)-26112013-22072 glycoprotein gene, partial cds52952989%1e-14699%KM212966.1Select seq gb|KM212965.1|Zika virus isolate NC13(FP)-20112013-22015 glycoprotein gene, partial cds52652689%1e-14599%KM212965.1Select seq gb|KM212964.1|Zika virus isolate NC14-17042014-4554 glycoprotein gene, partial cds52652689%1e-14599%KM212964.1Select seq gb|KM212963.1|Zika virus isolate NC14-23012014-250 glycoprotein gene, partial cds52652689%1e-14599%KM212963.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds52452489%5e-14599%KU646827.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds52452489%5e-14599%KJ634273.1Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds513513100%9e-14295%HQ234499.1Select seq gb|KJ579441.1|Zika virus isolate PF13-CP221013c polyprotein gene, partial cds50250285%2e-13899%KJ579441.1Select seq gb|KJ680134.1|Zika virus strain PF13-091213-121 polyprotein gene, partial cds49949985%2e-13799%KJ680134.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds486486100%1e-13393%KF268949.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds471471100%3e-12992%KF383115.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds468468100%3e-12891%KF268950.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds468468100%3e-12891%KF268948.1Select seq gb|KU963574.1|Zika virus isolate ZIKV/Homo sapiens/NGA/IbH-30656_SM21V1-V3/1968 polyprotein (GP1) gene, complete cds462462100%1e-12691%KU963574.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds462462100%1e-12691%HQ234500.1Select seq gb|KU963573.1|Zika virus isolate ZIKV/Macaca mulatta/UGA/MR-766_SM150-V8/1947 polyprotein (GP1) gene, complete cds459459100%2e-12591%KU963573.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome459459100%2e-12591%KU955594.1Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds459459100%2e-12591%KF383117.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds459459100%2e-12591%KF383116.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds459459100%2e-12591%DQ859059.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome459459100%2e-12591%AY632535.2Select seq gb|KX101061.1|Zika virus isolate Bahia03, partial genome45345377%8e-12499%KX101061.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds453453100%8e-12491%KU720415.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID453453100%8e-12491%LC002520.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds453453100%8e-12491%KF383121.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds453453100%8e-12491%KF383119.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds453453100%8e-12491%HQ234498.1Select seq gb|KX101066.1|Zika virus isolate Bahia01, partial genome45245275%3e-123100%KX101066.1Select seq gb|KX198134.1|Zika virus strain ZIKV/Aedes africanus/SEN/DAK-AR-41524_A1C1-V2/1984, complete genome450450100%9e-12390%KX198134.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome450450100%9e-12390%KU955595.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome450450100%9e-12390%KU955592.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome450450100%9e-12390%KU955591.1Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds450450100%9e-12390%HQ234501.1Select seq gb|KX173843.1|Zika virus isolate 16Z62 envelope protein gene, partial cds44344374%1e-120100%KX173843.1 Link to comment Share on other sites More sharing options...
niman Posted May 26, 2016 Author Report Share Posted May 26, 2016 Map Updatehttps://www.google.com/maps/d/u/0/edit?hl=en&mid=1XSxKe6FIecV8f33cQwyc7uylxeU Link to comment Share on other sites More sharing options...
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