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Posted (edited)
Institut Pasteur de la Guyane has released a series of full and partial sequences from cases in French Guiana, including the fill sequence, 17271.
Edited by niman
Posted
LOCUS       KU758877               10364 bp    RNA     linear   VRL 01-JUN-2016
DEFINITION  Zika virus isolate 17271 polyprotein gene, complete cds.
ACCESSION   KU758877
VERSION     KU758877.1  GI:1001229298
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10364)
  AUTHORS   Enfissi,A., Rousset,D., Matheus,S. and Kazanji,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2016) laboratoire de virologie, Institut Pasteur
            de la Guyane, 23 avenue Pasteur, Cayenne, French Guiana 97300,
            France
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Main Workbench 6 v. 6.9 Beta 4
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10364
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="17271"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="French Guiana"
                     /collection_date="Dec-2015"
     CDS             41..10312
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AML81028.1"
                     /db_xref="GI:1001229299"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLRKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
     mat_peptide     908..2425
                     /product="envelope protein"
ORIGIN      
        1 acaggtttta ttttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa
       61 atccggagga ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt
      121 tgggggcttg aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt
      181 cttggcgatt ctagcctttt tgagattcac ggcaatcaag ccatcactgg gtctcatcaa
      241 tagatggggt tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga
      301 tctggctgcc atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga
      361 tactagtgtc ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag
      421 acgtgggagt gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt
      481 tccaaccaca ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg
      541 tgatgccacc atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt
      601 cgattgttgg tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa
      661 aggtgaagca cggagatcta gaagagctgt gacgctcccc tcccattcca ctaggaagct
      721 gcaaacgcgg tcgcaaacct ggttggaatc aagagaatac acaaagcact tgattagagt
      781 cgaaaattgg atattcagga accctggctt cgcgttagca gcagctgcca tcgcttggct
      841 tttgggaagc tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc
      901 ggcatacagc atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg
      961 tgggacttgg gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga
     1021 caaaccgact gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag
     1081 atcctactgc tatgaggcat caatatcaga catggcttcg gacagccgct gcccaacaca
     1141 aggtgaagcc taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt
     1201 ggacagaggc tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc
     1261 taagtttgca tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta
     1321 ccggataatg ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg
     1381 acatgaaact gatgagaata gagcgaaagt tgagataacg cccaactcac caagagccga
     1441 agccaccctg gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga
     1501 cttttcagat ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg
     1561 gttccacgac attccattac cttggcacgc tggggcagac accggaactc cacactggaa
     1621 caacaaagaa gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt
     1681 tctagggagt caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat
     1741 ggatggtgca aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa
     1801 acttagattg aagggcgtgt catactcctt gtgtactgca gcgttcacat tcaccaagat
     1861 cccggctgaa acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg
     1921 accttgcaag gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag
     1981 gttgataacc gctaaccccg taatcactga aagcactgag aactctaaga tgatgctgga
     2041 acttgatcca ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac
     2101 ccaccactgg cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg
     2161 tgccaagaga atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc
     2221 tctcaactca ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt
     2281 tggaggaatg tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct
     2341 gaacacaaag aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt
     2401 cttatccaca gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggaaac
     2461 gagatgcggt acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa
     2521 gtaccatcct gactcccccc gtagattggc agcggcagtc aagcaagcct gggaagatgg
     2581 tatctgcggg atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg
     2641 ggagctcaac gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt
     2701 aaaaaacccc atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca
     2761 cggctggaag gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt
     2821 tgtcgtggat ggtgacacac tgaaggaatg cccactcaaa catagagcat ggaacagctt
     2881 tcttgtggag gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga
     2941 agattattca ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc
     3001 tgtacacagt gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa
     3061 gagggcccat ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac
     3121 agatggaata gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca
     3181 tcacaatacc agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct
     3241 tgaaattcgg tttgaggaat gcccaggcac taaggtccac gtggaggaaa catgtggaac
     3301 aagaggacca tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg
     3361 cagggagtgc acaatgcccc cactgtcgtt ccgggctaaa gatggctgtt ggtatggaat
     3421 ggagataagg cccaggaaag aaccagaaag caacttagta aggtcaatgg tgactgcagg
     3481 atcaactgat cacatggacc acttctccct tggagtgctt gtgatcctgc tcatggtgca
     3541 ggaagggctg aggaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct
     3601 ggtagctatg atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat
     3661 gggtgccacc ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc
     3721 ggcattcaaa gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc
     3781 ccgtgaaagc atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt
     3841 ggaaggcgac ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc
     3901 gatggttgtt ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact
     3961 ggcccggggc acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat
     4021 gctcctctct ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct
     4081 gggactaacc gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac
     4141 aaggagtggg aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg
     4201 cgcattggct ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt
     4261 cggtctgcta attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag
     4321 agcaggtgac atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggctcga
     4381 tgtggcgcta gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag
     4441 agagatcata ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc
     4501 ctttgcagct ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gtgctctatg
     4561 ggatgtgcct gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt
     4621 aatgactcgt agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt
     4681 ctttcacact atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact
     4741 tgatccatac tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct
     4801 agatgccgcc tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag
     4861 agcgaggaac atccagactc tgcccggaat atttaagaca aaagatgggg acattggagc
     4921 ggttgcgctg gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag
     4981 agtgatagga ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat
     5041 cacccaaggg aggagggagg aagagactcc tgttgagtgc ttcgagccct cgatgctgaa
     5101 gaagaagcag ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct
     5161 tcctgaaata gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac
     5221 cagggttgtc gctgctgaaa tggaggaggc ccttagaggg cttccagtgc gttatatgac
     5281 aacagcagtc aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac
     5341 cttcacttca cgtctactac agccaatcag agtccccaac tataatctgt atattatgga
     5401 tgaggcccac ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt
     5461 tgagatgggc gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc
     5521 atttccggac tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg
     5581 gagctcaggc tttgattggg tgacggatca ttctggaaaa acagtttggt ttgttccaag
     5641 cgtgaggaac ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca
     5701 gctcagcaga aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt
     5761 tgtcgtgaca actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga
     5821 ttccaggaga tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc
     5881 catgcctgtc acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa
     5941 caaacctgga gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc
     6001 acactggctt gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc
     6061 ctcgctctat cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag
     6121 gacggagcaa aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct
     6181 ggcctatcag gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg
     6241 cacgaccaac aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg
     6301 agagaaaaga gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcatgcggc
     6361 cctgaagtca ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga
     6421 agccctggga acactgccag gacacatgac agagagattc caggaagcca ttgacaacct
     6481 cgctgtgctc atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt
     6541 gccggagacc ctagagacca taatgctttt ggggttgctg ggaacagtct cgctgggaat
     6601 cttcttcgtc ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgaccct
     6661 tggggccagc gcatggctca tgtggctctc ggaaattgag ccagccagga ttgcatgtgt
     6721 cctcattgtt gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc
     6781 tccccaggac aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat
     6841 taccgccaat gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg
     6901 aaggagagag gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc
     6961 agcttgggcc atctatgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt
     7021 gaccacctca tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt
     7081 tggtatgggc aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat
     7141 aggttgctac tcacaattaa cacccctgac cctaatagtg gccatcattt tgctcgtggc
     7201 gcactacatg tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag
     7261 aacggcagct ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga
     7321 cacaatgaca attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt
     7381 agccgtctcc agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct
     7441 gatcacagcc gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc
     7501 tacagccact tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat
     7561 ctacacagta acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac
     7621 cctgggagag aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta
     7681 caaaaagtca ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg
     7741 tgtggcaacg ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga
     7801 gcggggatac ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg
     7861 gagttactac gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg
     7921 ccctggtcat gaagaacccg tgttggtgca aagctatggg tggaacatag tccgtcttaa
     7981 gagtggggtg gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat
     8041 aggtgagtca tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctctccat
     8101 ggtgggggat tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata
     8161 caccagcact atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt
     8221 cagagtgcca ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag
     8281 caacaccata aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc
     8341 taggaggcca gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt
     8401 aagctgcgct gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag
     8461 tgagcacgcg gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca
     8521 tggaagctat gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag
     8581 gctcctgtca aaaccctggg atgtggtgac tggagtcaca ggaatagcca tgaccgacac
     8641 cacaccgtat ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagaccc
     8701 ccaagaaggc actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg
     8761 caaacacaaa cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa
     8821 tgcagcatta ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt
     8881 gaacgatcca aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga
     8941 gtgccagagt tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg
     9001 aaaggccaag ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt
     9061 cgaagccctt ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg
     9121 tgttgaaggg ctgggattac aaagactcgg atatgtccta gaagagatga gtcgtatacc
     9181 aggaggaagg atgtatgcag atgacactgc tggctgggac acccgcatta gcaggtttga
     9241 tctggagaat gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt
     9301 ggccataatc aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa
     9361 agggaaaaca gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt
     9421 cacttacgct cttaacacat ttaccaacct agtggtgcaa ctcattcgga atatggaggc
     9481 tgaggaagtt ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa
     9541 ctggttgcag agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg
     9601 cgttgtgaag ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg
     9661 aaaagttagg aaggacacac aagagtggaa accctcaact ggatgggaca actgggaaga
     9721 agttccgttt tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt
     9781 ggttccctgc cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg
     9841 atggagcatc cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct
     9901 ttatttccac agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt
     9961 tgactgggtt ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac
    10021 cactgaagac atgcttgtgg tgtggaacag agtgtggatt gaggaaaacg accacatgga
    10081 agacaagacc ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt
    10141 gtggtgtgga tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa
    10201 cacagtcaac atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc
    10261 cacccaagtt cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat
    10321 cttaatgttg tcaggcctgc tagtcagcca cagcttgggg aaag
Posted
Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1852518525100%0.0100%KU758877.1
1845318453100%0.099%KU937936.1
1844418444100%0.099%KU365778.1
1843518435100%0.099%KU501215.1
1842918429100%0.099%KX087101.2
1842918429100%0.099%KU707826.1
1842918429100%0.099%KU365779.1
1841718417100%0.099%KU365780.1
1841718417100%0.099%KU312312.1
1841118411100%0.099%KU365777.1
1839918399100%0.099%KU509998.3
1839918399100%0.099%KU820898.1
1839318393100%0.099%KX056898.1
1839318393100%0.099%KJ776791.1
1839018390100%0.099%KX262887.1
1839018390100%0.099%KU740184.2
1839018390100%0.099%KU761564.1
1838418384100%0.099%KX280026.1
1838418384100%0.099%KU991811.1
1838418384100%0.099%KU955590.1
1838418384100%0.099%KU321639.1
1838118381100%0.099%KX051563.1
1837518375100%0.099%KU729218.1
1837218372100%0.099%KX198135.1
1837218372100%0.099%KX197192.1
1837218372100%0.099%KU926309.1
1837218372100%0.099%KU501217.1
1836618366100%0.099%KU501216.1
1836318363100%0.099%KX247646.1
1836318363100%0.099%KX247632.1
1836318363100%0.099%KX156776.1
1835718357100%0.099%KX156774.1
1835718357100%0.099%KU940228.1
1835718357100%0.099%KU647676.1
1835418354100%0.099%KU820897.2
1835418354100%0.099%KX156775.1
1835418354100%0.099%KX087102.1
183501835099%0.099%KU497555.1
1834818348100%0.099%KU870645.1
1834818348100%0.099%KU729217.2
1834818348100%0.099%KU527068.1
1833918339100%0.099%KU922960.1
1833618336100%0.099%KU926310.1
1833618336100%0.099%KU922923.1
1832718327100%0.099%KU853013.1
1832518325100%0.099%KU853012.1
1830318303100%0.099%KX117076.1
1829418294100%0.099%KX185891.1
1829418294100%0.099%KU963796.1
1829118291100%0.099%KX253996.1
1829118291100%0.099%KU955589.1
1829118291100%0.099%KU820899.2
182641826499%0.099%KU940224.1
1818618186100%0.099%KU866423.1
1815918159100%0.099%KU744693.1
1806018060100%0.099%KU681081.3
1775917759100%0.098%KU955593.1
177571775799%0.098%JN860885.1
177061770698%0.099%KF993678.1
1760317603100%0.098%EU545988.1
1746117461100%0.098%KU681082.3
164331643399%0.095%HQ234499.1
1331313313100%0.089%KU720415.1
133081330899%0.089%HQ234498.1
1329013290100%0.089%KU955595.1
1329013290100%0.089%LC002520.1
1328813288100%0.089%KF383115.1
1328613286100%0.089%KF383119.1
1328413284100%0.089%KF268949.1
1328413284100%0.089%KF268948.1
1328113281100%0.089%KU955592.1
1327713277100%0.089%KF268950.1
1327413274100%0.089%KU963573.1
1327413274100%0.089%KU955594.1
1326813756100%0.089%KX198134.1
1326313263100%0.089%KU955591.1
1325713257100%0.089%DQ859059.1
1324813248100%0.089%KF383116.1
1323213232100%0.089%AY632535.2
132231322399%0.089%HQ234501.1
1318713187100%0.088%KF383117.1
1315813266100%0.088%KU963574.1
131561315699%0.088%HQ234500.1
1297213040100%0.088%KF383118.1
128881288897%0.089%KF383121.1
108901089097%0.084%KF383120.1
50431443187%0.095%KU940227.1
5021502127%0.099%KX212103.1
5005500527%0.099%KU758875.1
5002500227%0.099%KU758873.1
5002500227%0.099%KU758871.1
4994499427%0.099%KU758870.1
4994499427%0.099%KU312314.1
4989498927%0.099%KU758872.1
4978497827%0.099%KU758876.1
4967496727%0.099%KU312313.1
4940494026%0.099%KU758869.1
4915491526%0.099%KU758868.1
4911491126%0.099%KU758874.1
4646464625%0.099%KU646828.1
4637463725%0.099%KU646827.1
42261330475%0.095%KX101060.1
3449344918%0.099%KU312315.1
3220322017%0.099%KU740199.1
31101309274%0.099%KX101066.1
2861420295%0.071%DQ859064.1
2691269114%0.099%KJ634273.1
22681077265%0.092%KX101064.1
2060206011%0.099%KU686218.1
2017201711%0.099%KU179098.1
18461389378%0.0100%KX101061.1
183318339%0.099%KX059014.1
183318339%0.099%KX059013.1
174617469%0.099%KM078936.1
174517459%0.099%KM078961.1
174317439%0.099%KM078930.1
173917399%0.099%KM078971.1
173917399%0.099%KM078970.1
173917399%0.099%KM078933.1
173717379%0.099%KM078929.1
165416549%0.099%KX173841.1
165416549%0.099%KX173840.1
159715978%0.099%KJ873160.1
152315238%0.099%KX173843.1
151215128%0.099%KX173844.1
141514157%0.099%KJ873161.1
138213827%0.099%KM851039.1
134813487%0.099%KU985087.1
134613467%0.098%KM851038.1
134213427%0.099%KU556802.1
1315131510%0.088%AF013415.1
124512456%0.099%KT200609.1
123412346%0.099%KU232300.1
122512256%0.099%KU232290.1
122312236%0.099%KU232297.1
121612166%0.099%KU232294.1
121312136%0.099%KU232292.1
120912096%0.099%KU232298.1
120712076%0.099%KU232293.1
120512056%0.099%KU232296.1
120212026%0.099%KU232295.1
119111916%0.099%KU232288.1
118711876%0.099%KU232289.1
1186742542%0.099%KX101063.1
118411846%0.099%KU232299.1
1180777146%0.099%KX101065.1
118011806%0.099%KU232291.1
113911396%0.099%KU758878.1
107210728%0.088%KF270886.1
1054733241%0.097%KX101062.1
101810185%0.0100%KU867812.1

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