niman Posted June 3, 2016 Report Share Posted June 3, 2016 (edited) Institut Pasteur de la Guyane has released a series of full and partial sequences from cases in French Guiana, including the fill sequence, 17271. Edited June 3, 2016 by niman Link to comment Share on other sites More sharing options...
niman Posted June 3, 2016 Author Report Share Posted June 3, 2016 LOCUS KU758877 10364 bp RNA linear VRL 01-JUN-2016 DEFINITION Zika virus isolate 17271 polyprotein gene, complete cds. ACCESSION KU758877 VERSION KU758877.1 GI:1001229298 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10364) AUTHORS Enfissi,A., Rousset,D., Matheus,S. and Kazanji,M. TITLE Direct Submission JOURNAL Submitted (25-FEB-2016) laboratoire de virologie, Institut Pasteur de la Guyane, 23 avenue Pasteur, Cayenne, French Guiana 97300, France COMMENT ##Assembly-Data-START## Assembly Method :: CLC Main Workbench 6 v. 6.9 Beta 4 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10364 /organism="Zika virus" /mol_type="genomic RNA" /isolate="17271" /isolation_source="urine" /host="Homo sapiens" /db_xref="taxon:64320" /country="French Guiana" /collection_date="Dec-2015" CDS 41..10312 /codon_start=1 /product="polyprotein" /protein_id="AML81028.1" /db_xref="GI:1001229299" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK RRGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR GPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA GSTDHMDHFSLGVLVILLMVQEGLRKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" mat_peptide 908..2425 /product="envelope protein" ORIGIN 1 acaggtttta ttttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa 61 atccggagga ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt 121 tgggggcttg aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt 181 cttggcgatt ctagcctttt tgagattcac ggcaatcaag ccatcactgg gtctcatcaa 241 tagatggggt tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga 301 tctggctgcc atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga 361 tactagtgtc ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag 421 acgtgggagt gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt 481 tccaaccaca ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg 541 tgatgccacc atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt 601 cgattgttgg tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa 661 aggtgaagca cggagatcta gaagagctgt gacgctcccc tcccattcca ctaggaagct 721 gcaaacgcgg tcgcaaacct ggttggaatc aagagaatac acaaagcact tgattagagt 781 cgaaaattgg atattcagga accctggctt cgcgttagca gcagctgcca tcgcttggct 841 tttgggaagc tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc 901 ggcatacagc atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg 961 tgggacttgg gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga 1021 caaaccgact gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag 1081 atcctactgc tatgaggcat caatatcaga catggcttcg gacagccgct gcccaacaca 1141 aggtgaagcc taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt 1201 ggacagaggc tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc 1261 taagtttgca tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta 1321 ccggataatg ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg 1381 acatgaaact gatgagaata gagcgaaagt tgagataacg cccaactcac caagagccga 1441 agccaccctg gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga 1501 cttttcagat ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg 1561 gttccacgac attccattac cttggcacgc tggggcagac accggaactc cacactggaa 1621 caacaaagaa gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt 1681 tctagggagt caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat 1741 ggatggtgca aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa 1801 acttagattg aagggcgtgt catactcctt gtgtactgca gcgttcacat tcaccaagat 1861 cccggctgaa acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg 1921 accttgcaag gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag 1981 gttgataacc gctaaccccg taatcactga aagcactgag aactctaaga tgatgctgga 2041 acttgatcca ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac 2101 ccaccactgg cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg 2161 tgccaagaga atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc 2221 tctcaactca ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt 2281 tggaggaatg tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct 2341 gaacacaaag aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt 2401 cttatccaca gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggaaac 2461 gagatgcggt acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa 2521 gtaccatcct gactcccccc gtagattggc agcggcagtc aagcaagcct gggaagatgg 2581 tatctgcggg atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg 2641 ggagctcaac gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt 2701 aaaaaacccc atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca 2761 cggctggaag gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt 2821 tgtcgtggat ggtgacacac tgaaggaatg cccactcaaa catagagcat ggaacagctt 2881 tcttgtggag gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga 2941 agattattca ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc 3001 tgtacacagt gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa 3061 gagggcccat ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac 3121 agatggaata gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca 3181 tcacaatacc agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct 3241 tgaaattcgg tttgaggaat gcccaggcac taaggtccac gtggaggaaa catgtggaac 3301 aagaggacca tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg 3361 cagggagtgc acaatgcccc cactgtcgtt ccgggctaaa gatggctgtt ggtatggaat 3421 ggagataagg cccaggaaag aaccagaaag caacttagta aggtcaatgg tgactgcagg 3481 atcaactgat cacatggacc acttctccct tggagtgctt gtgatcctgc tcatggtgca 3541 ggaagggctg aggaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct 3601 ggtagctatg atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat 3661 gggtgccacc ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc 3721 ggcattcaaa gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc 3781 ccgtgaaagc atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt 3841 ggaaggcgac ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc 3901 gatggttgtt ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact 3961 ggcccggggc acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat 4021 gctcctctct ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct 4081 gggactaacc gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac 4141 aaggagtggg aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg 4201 cgcattggct ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt 4261 cggtctgcta attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag 4321 agcaggtgac atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggctcga 4381 tgtggcgcta gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag 4441 agagatcata ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc 4501 ctttgcagct ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gtgctctatg 4561 ggatgtgcct gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt 4621 aatgactcgt agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt 4681 ctttcacact atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact 4741 tgatccatac tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct 4801 agatgccgcc tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag 4861 agcgaggaac atccagactc tgcccggaat atttaagaca aaagatgggg acattggagc 4921 ggttgcgctg gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag 4981 agtgatagga ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat 5041 cacccaaggg aggagggagg aagagactcc tgttgagtgc ttcgagccct cgatgctgaa 5101 gaagaagcag ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct 5161 tcctgaaata gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac 5221 cagggttgtc gctgctgaaa tggaggaggc ccttagaggg cttccagtgc gttatatgac 5281 aacagcagtc aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac 5341 cttcacttca cgtctactac agccaatcag agtccccaac tataatctgt atattatgga 5401 tgaggcccac ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt 5461 tgagatgggc gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc 5521 atttccggac tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg 5581 gagctcaggc tttgattggg tgacggatca ttctggaaaa acagtttggt ttgttccaag 5641 cgtgaggaac ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca 5701 gctcagcaga aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt 5761 tgtcgtgaca actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga 5821 ttccaggaga tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc 5881 catgcctgtc acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa 5941 caaacctgga gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc 6001 acactggctt gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc 6061 ctcgctctat cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag 6121 gacggagcaa aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct 6181 ggcctatcag gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg 6241 cacgaccaac aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg 6301 agagaaaaga gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcatgcggc 6361 cctgaagtca ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga 6421 agccctggga acactgccag gacacatgac agagagattc caggaagcca ttgacaacct 6481 cgctgtgctc atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt 6541 gccggagacc ctagagacca taatgctttt ggggttgctg ggaacagtct cgctgggaat 6601 cttcttcgtc ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgaccct 6661 tggggccagc gcatggctca tgtggctctc ggaaattgag ccagccagga ttgcatgtgt 6721 cctcattgtt gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc 6781 tccccaggac aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat 6841 taccgccaat gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg 6901 aaggagagag gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc 6961 agcttgggcc atctatgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt 7021 gaccacctca tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt 7081 tggtatgggc aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat 7141 aggttgctac tcacaattaa cacccctgac cctaatagtg gccatcattt tgctcgtggc 7201 gcactacatg tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag 7261 aacggcagct ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga 7321 cacaatgaca attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt 7381 agccgtctcc agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct 7441 gatcacagcc gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc 7501 tacagccact tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat 7561 ctacacagta acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac 7621 cctgggagag aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta 7681 caaaaagtca ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg 7741 tgtggcaacg ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga 7801 gcggggatac ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg 7861 gagttactac gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg 7921 ccctggtcat gaagaacccg tgttggtgca aagctatggg tggaacatag tccgtcttaa 7981 gagtggggtg gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat 8041 aggtgagtca tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctctccat 8101 ggtgggggat tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata 8161 caccagcact atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt 8221 cagagtgcca ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag 8281 caacaccata aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc 8341 taggaggcca gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt 8401 aagctgcgct gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag 8461 tgagcacgcg gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca 8521 tggaagctat gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag 8581 gctcctgtca aaaccctggg atgtggtgac tggagtcaca ggaatagcca tgaccgacac 8641 cacaccgtat ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagaccc 8701 ccaagaaggc actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg 8761 caaacacaaa cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa 8821 tgcagcatta ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt 8881 gaacgatcca aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga 8941 gtgccagagt tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg 9001 aaaggccaag ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt 9061 cgaagccctt ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg 9121 tgttgaaggg ctgggattac aaagactcgg atatgtccta gaagagatga gtcgtatacc 9181 aggaggaagg atgtatgcag atgacactgc tggctgggac acccgcatta gcaggtttga 9241 tctggagaat gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt 9301 ggccataatc aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa 9361 agggaaaaca gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt 9421 cacttacgct cttaacacat ttaccaacct agtggtgcaa ctcattcgga atatggaggc 9481 tgaggaagtt ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa 9541 ctggttgcag agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg 9601 cgttgtgaag ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg 9661 aaaagttagg aaggacacac aagagtggaa accctcaact ggatgggaca actgggaaga 9721 agttccgttt tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt 9781 ggttccctgc cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg 9841 atggagcatc cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct 9901 ttatttccac agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt 9961 tgactgggtt ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac 10021 cactgaagac atgcttgtgg tgtggaacag agtgtggatt gaggaaaacg accacatgga 10081 agacaagacc ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt 10141 gtggtgtgga tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa 10201 cacagtcaac atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc 10261 cacccaagtt cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat 10321 cttaatgttg tcaggcctgc tagtcagcca cagcttgggg aaag Link to comment Share on other sites More sharing options...
niman Posted June 3, 2016 Author Report Share Posted June 3, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KU758877.1|Zika virus isolate 17271 polyprotein gene, complete cds1852518525100%0.0100%KU758877.1Select seq gb|KU937936.1|Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds1845318453100%0.099%KU937936.1Select seq gb|KU365778.1|Zika virus strain BeH819015 polyprotein gene, complete cds1844418444100%0.099%KU365778.1Select seq gb|KU501215.1|Zika virus strain PRVABC59, complete genome1843518435100%0.099%KU501215.1Select seq gb|KX087101.2|Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome1842918429100%0.099%KX087101.2Select seq gb|KU707826.1|Zika virus isolate SSABR1, complete genome1842918429100%0.099%KU707826.1Select seq gb|KU365779.1|Zika virus strain BeH819966 polyprotein gene, complete cds1842918429100%0.099%KU365779.1Select seq gb|KU365780.1|Zika virus strain BeH815744 polyprotein gene, complete cds1841718417100%0.099%KU365780.1Select seq gb|KU312312.1|Zika virus isolate Z1106033 polyprotein gene, complete cds1841718417100%0.099%KU312312.1Select seq gb|KU365777.1|Zika virus strain BeH818995 polyprotein gene, complete cds1841118411100%0.099%KU365777.1Select seq gb|KU509998.3|Zika virus strain Haiti/1225/2014, complete genome1839918399100%0.099%KU509998.3Select seq gb|KU820898.1|Zika virus isolate GZ01 polyprotein gene, complete cds1839918399100%0.099%KU820898.1Select seq gb|KX056898.1|Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds1839318393100%0.099%KX056898.1Select seq gb|KJ776791.1|Zika virus strain H/PF/2013 polyprotein gene, complete cds1839318393100%0.099%KJ776791.1Select seq gb|KX262887.1|Zika virus isolate 103451, complete genome1839018390100%0.099%KX262887.1Select seq gb|KU740184.2|Zika virus isolate GD01 polyprotein gene, complete cds1839018390100%0.099%KU740184.2Select seq gb|KU761564.1|Zika virus isolate GDZ16001 polyprotein gene, complete cds1839018390100%0.099%KU761564.1Select seq gb|KX280026.1|Zika virus isolate Paraiba_01, complete genome1838418384100%0.099%KX280026.1Select seq gb|KU991811.1|Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds1838418384100%0.099%KU991811.1Select seq gb|KU955590.1|Zika virus isolate Z16019 polyprotein gene, complete cds1838418384100%0.099%KU955590.1Select seq gb|KU321639.1|Zika virus strain ZikaSPH2015, complete genome1838418384100%0.099%KU321639.1Select seq gb|KX051563.1|Zika virus isolate Haiti/1/2016, complete genome1838118381100%0.099%KX051563.1Select seq gb|KU729218.1|Zika virus isolate BeH828305 polyprotein gene, complete cds1837518375100%0.099%KU729218.1Select seq gb|KX198135.1|Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome1837218372100%0.099%KX198135.1Select seq gb|KX197192.1|Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome1837218372100%0.099%KX197192.1Select seq gb|KU926309.1|Zika virus isolate Rio-U1, complete genome1837218372100%0.099%KU926309.1Select seq gb|KU501217.1|Zika virus strain 8375 polyprotein gene, complete cds1837218372100%0.099%KU501217.1Select seq gb|KU501216.1|Zika virus strain 103344 polyprotein gene, complete cds1836618366100%0.099%KU501216.1Select seq gb|KX247646.1|Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome1836318363100%0.099%KX247646.1Select seq gb|KX247632.1|Zika virus isolate MEX_I_7 polyprotein gene, complete cds1836318363100%0.099%KX247632.1Select seq gb|KX156776.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome1836318363100%0.099%KX156776.1Select seq gb|KX156774.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome1835718357100%0.099%KX156774.1Select seq gb|KU940228.1|Zika virus isolate Bahia07, partial genome1835718357100%0.099%KU940228.1Select seq gb|KU647676.1|Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds1835718357100%0.099%KU647676.1Select seq gb|KU820897.2|Zika virus isolate FLR polyprotein gene, complete cds1835418354100%0.099%KU820897.2Select seq gb|KX156775.1|Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome1835418354100%0.099%KX156775.1Select seq gb|KX087102.1|Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome1835418354100%0.099%KX087102.1Select seq gb|KU497555.1|Zika virus isolate Brazil-ZKV2015, complete genome183501835099%0.099%KU497555.1Select seq gb|KU870645.1|Zika virus isolate FB-GWUH-2016, complete genome1834818348100%0.099%KU870645.1Select seq gb|KU729217.2|Zika virus isolate BeH823339 polyprotein gene, complete cds1834818348100%0.099%KU729217.2Select seq gb|KU527068.1|Zika virus strain Natal RGN, complete genome1834818348100%0.099%KU527068.1Select seq gb|KU922960.1|Zika virus isolate MEX/InDRE/Sm/2016, complete genome1833918339100%0.099%KU922960.1Select seq gb|KU926310.1|Zika virus isolate Rio-S1, complete genome1833618336100%0.099%KU926310.1Select seq gb|KU922923.1|Zika virus isolate MEX/InDRE/Lm/2016, complete genome1833618336100%0.099%KU922923.1Select seq gb|KU853013.1|Zika virus isolate Dominican Republic/2016/PD2, complete genome1832718327100%0.099%KU853013.1Select seq gb|KU853012.1|Zika virus isolate Dominican Republic/2016/PD1, complete genome1832518325100%0.099%KU853012.1Select seq gb|KX117076.1|Zika virus isolate Zhejiang04, complete genome1830318303100%0.099%KX117076.1Select seq gb|KX185891.1|Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds1829418294100%0.099%KX185891.1Select seq gb|KU963796.1|Zika virus isolate SZ-WIV01 polyprotein gene, complete cds1829418294100%0.099%KU963796.1Select seq gb|KX253996.1|Zika virus isolate ZKC2/2016, complete genome1829118291100%0.099%KX253996.1Select seq gb|KU955589.1|Zika virus isolate Z16006 polyprotein gene, complete cds1829118291100%0.099%KU955589.1Select seq gb|KU820899.2|Zika virus isolate ZJ03, complete genome1829118291100%0.099%KU820899.2Select seq gb|KU940224.1|Zika virus isolate Bahia09, partial genome182641826499%0.099%KU940224.1Select seq gb|KU866423.1|Zika virus isolate Zika virus/SZ01/2016 polyprotein gene, complete cds1818618186100%0.099%KU866423.1Select seq gb|KU744693.1|Zika virus isolate VE_Ganxian, complete genome1815918159100%0.099%KU744693.1Select seq gb|KU681081.3|Zika virus isolate Zika virus/H.sapiens-tc/THA/2014/SV0127- 14, complete genome1806018060100%0.099%KU681081.3Select seq gb|KU955593.1|Zika virus isolate Zika virus/H.sapiens-tc/KHM/2010/FSS13025, complete genome1775917759100%0.098%KU955593.1Select seq gb|JN860885.1|Zika virus isolate FSS13025 polyprotein gene, partial cds177571775799%0.098%JN860885.1Select seq gb|KF993678.1|Zika virus strain PLCal_ZV from Canada polyprotein gene, partial cds177061770698%0.099%KF993678.1Select seq gb|EU545988.1|Zika virus polyprotein gene, complete cds1760317603100%0.098%EU545988.1Select seq gb|KU681082.3|Zika virus isolate Zika virus/H.sapiens-tc/PHL/2012/CPC-0740, complete genome1746117461100%0.098%KU681082.3Select seq gb|HQ234499.1|Zika virus isolate P6-740 polyprotein gene, partial cds164331643399%0.095%HQ234499.1Select seq gb|KU720415.1|Zika virus strain MR 766 polyprotein gene, complete cds1331313313100%0.089%KU720415.1Select seq gb|HQ234498.1|Zika virus isolate MR_766 polyprotein gene, partial cds133081330899%0.089%HQ234498.1Select seq gb|KU955595.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41671-DAK, complete genome1329013290100%0.089%KU955595.1Select seq dbj|LC002520.1|Zika virus genomic RNA, complete genome, strain: MR766-NIID1329013290100%0.089%LC002520.1Select seq gb|KF383115.1|Zika virus strain ArB1362 polyprotein gene, complete cds1328813288100%0.089%KF383115.1Select seq gb|KF383119.1|Zika virus strain ArD158084 polyprotein gene, complete cds1328613286100%0.089%KF383119.1Select seq gb|KF268949.1|Zika virus isolate ARB15076 polyprotein gene, complete cds1328413284100%0.089%KF268949.1Select seq gb|KF268948.1|Zika virus isolate ARB13565 polyprotein gene, complete cds1328413284100%0.089%KF268948.1Select seq gb|KU955592.1|Zika virus isolate Zika virus/A.taylori-tc/SEN/1984/41662-DAK, complete genome1328113281100%0.089%KU955592.1Select seq gb|KF268950.1|Zika virus isolate ARB7701 polyprotein gene, complete cds1327713277100%0.089%KF268950.1Select seq gb|KU963573.1|Zika virus isolate ZIKV/Macaca mulatta/UGA/MR-766_SM150-V8/1947 polyprotein (GP1) gene, complete cds1327413274100%0.089%KU963573.1Select seq gb|KU955594.1|Zika virus isolate Zika virus/M.mulatta-tc/UGA/1947/MR-766, complete genome1327413274100%0.089%KU955594.1Select seq gb|KX198134.1|Zika virus strain ZIKV/Aedes africanus/SEN/DAK-AR-41524_A1C1-V2/1984, complete genome1326813756100%0.089%KX198134.1Select seq gb|KU955591.1|Zika virus isolate Zika virus/A.africanus-tc/SEN/1984/41525-DAK, complete genome1326313263100%0.089%KU955591.1Select seq gb|DQ859059.1|Zika virus strain MR 766 polyprotein gene, complete cds1325713257100%0.089%DQ859059.1Select seq gb|KF383116.1|Zika virus strain ArD7117 polyprotein gene, complete cds1324813248100%0.089%KF383116.1Select seq gb|AY632535.2|Zika virus strain MR 766, complete genome1323213232100%0.089%AY632535.2Select seq gb|HQ234501.1|Zika virus isolate ArD_41519 polyprotein gene, partial cds132231322399%0.089%HQ234501.1Select seq gb|KF383117.1|Zika virus strain ArD128000 polyprotein gene, complete cds1318713187100%0.088%KF383117.1Select seq gb|KU963574.1|Zika virus isolate ZIKV/Homo sapiens/NGA/IbH-30656_SM21V1-V3/1968 polyprotein (GP1) gene, complete cds1315813266100%0.088%KU963574.1Select seq gb|HQ234500.1|Zika virus isolate IbH_30656 polyprotein gene, partial cds131561315699%0.088%HQ234500.1Select seq gb|KF383118.1|Zika virus strain ArD157995 polyprotein gene, complete cds1297213040100%0.088%KF383118.1Select seq gb|KF383121.1|Zika virus strain ArD158095 polyprotein gene, partial cds128881288897%0.089%KF383121.1Select seq gb|KF383120.1|Zika virus strain ArD142623 nonfunctional polyprotein gene, partial sequence108901089097%0.084%KF383120.1Select seq gb|KU940227.1|Zika virus isolate Bahia08, partial genome50431443187%0.095%KU940227.1Select seq gb|KX212103.1|Zika virus isolate BRZIKV_AB_ES polyprotein gene, partial cds5021502127%0.099%KX212103.1Select seq gb|KU758875.1|Zika virus isolate 15042 polyprotein gene, partial cds5005500527%0.099%KU758875.1Select seq gb|KU758873.1|Zika virus isolate 18246 polyprotein gene, partial cds5002500227%0.099%KU758873.1Select seq gb|KU758871.1|Zika virus isolate 17170 polyprotein gene, partial cds5002500227%0.099%KU758871.1Select seq gb|KU758870.1|Zika virus isolate 17160 polyprotein gene, partial cds4994499427%0.099%KU758870.1Select seq gb|KU312314.1|Zika virus isolate Z1106031 polyprotein gene, partial cds4994499427%0.099%KU312314.1Select seq gb|KU758872.1|Zika virus isolate 01170 polyprotein gene, partial cds4989498927%0.099%KU758872.1Select seq gb|KU758876.1|Zika virus isolate 21068 polyprotein gene, partial cds4978497827%0.099%KU758876.1Select seq gb|KU312313.1|Zika virus isolate Z1106032 polyprotein gene, partial cds4967496727%0.099%KU312313.1Select seq gb|KU758869.1|Zika virus isolate 05211 polyprotein gene, partial cds4940494026%0.099%KU758869.1Select seq gb|KU758868.1|Zika virus isolate 27229 polyprotein gene, partial cds4915491526%0.099%KU758868.1Select seq gb|KU758874.1|Zika virus isolate 20114 polyprotein gene, partial cds4911491126%0.099%KU758874.1Select seq gb|KU646828.1|Zika virus isolate Si322 polyprotein gene, partial cds4646464625%0.099%KU646828.1Select seq gb|KU646827.1|Zika virus isolate Si323 polyprotein gene, partial cds4637463725%0.099%KU646827.1Select seq gb|KX101060.1|Zika virus isolate Bahia02, partial genome42261330475%0.095%KX101060.1Select seq gb|KU312315.1|Zika virus isolate Z1106027 polyprotein gene, partial cds3449344918%0.099%KU312315.1Select seq gb|KU740199.1|Zika virus isolate VE_Ganxian2016 polyprotein gene, partial cds3220322017%0.099%KU740199.1Select seq gb|KX101066.1|Zika virus isolate Bahia01, partial genome31101309274%0.099%KX101066.1Select seq gb|DQ859064.1|Spondweni virus strain SM-6 V-1 polyprotein gene, complete cds2861420295%0.071%DQ859064.1Select seq gb|KJ634273.1|Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds2691269114%0.099%KJ634273.1Select seq gb|KX101064.1|Zika virus isolate Bahia11, partial genome22681077265%0.092%KX101064.1Select seq gb|KU686218.1|Zika virus isolate MEX/InDRE/14/2015 polyprotein gene, partial cds2060206011%0.099%KU686218.1Select seq gb|KU179098.1|Zika virus isolate JMB-185 nonstructural protein 5 gene, partial cds2017201711%0.099%KU179098.1Select seq gb|KX101061.1|Zika virus isolate Bahia03, partial genome18461389378%0.0100%KX101061.1Select seq gb|KX059014.1|Zika virus isolate Haiti/1230/2014 NS5 gene, partial cds183318339%0.099%KX059014.1Select seq gb|KX059013.1|Zika virus isolate Haiti/1227/2014 NS5 gene, partial cds183318339%0.099%KX059013.1Select seq gb|KM078936.1|Zika virus strain CHI1410214 NS5 protein gene, partial cds174617469%0.099%KM078936.1Select seq gb|KM078961.1|Zika virus strain CHI2612114 NS5 protein gene, partial cds174517459%0.099%KM078961.1Select seq gb|KM078930.1|Zika virus strain CHI2283714 NS5 protein gene, partial cds174317439%0.099%KM078930.1Select seq gb|KM078971.1|Zika virus strain CHI2613014 NS5 protein gene, partial cds173917399%0.099%KM078971.1Select seq gb|KM078970.1|Zika virus strain CHI2490414 NS5 protein gene, partial cds173917399%0.099%KM078970.1Select seq gb|KM078933.1|Zika virus strain CHI1058514 NS5 protein gene, partial cds173917399%0.099%KM078933.1Select seq gb|KM078929.1|Zika virus strain CHI1805214 NS5 protein gene, partial cds173717379%0.099%KM078929.1Select seq gb|KX173841.1|Zika virus isolate 16Z11 envelope protein gene, partial cds165416549%0.099%KX173841.1Select seq gb|KX173840.1|Zika virus isolate 16Z10 envelope protein gene, partial cds165416549%0.099%KX173840.1Select seq gb|KJ873160.1|Zika virus isolate NC14-03042014-3481 nonstructural protein 5 gene, partial cds159715978%0.099%KJ873160.1Select seq gb|KX173843.1|Zika virus isolate 16Z62 envelope protein gene, partial cds152315238%0.099%KX173843.1Select seq gb|KX173844.1|Zika virus isolate 16Z62 envelope protein gene, partial cds151215128%0.099%KX173844.1Select seq gb|KJ873161.1|Zika virus isolate NC14-02042014-3220 nonstructural protein 5 gene, partial cds141514157%0.099%KJ873161.1Select seq gb|KM851039.1|Zika virus strain SV0127/14 nonstructural protein 5 gene, partial cds138213827%0.099%KM851039.1Select seq gb|KU985087.1|Zika virus isolate MEX/InDRE/Zika-2/2015 nonstructural protein 5 gene, partial cds134813487%0.099%KU985087.1Select seq gb|KM851038.1|Zika virus strain CPC-0740 nonstructural protein 5 gene, partial cds134613467%0.098%KM851038.1Select seq gb|KU556802.1|Zika virus isolate MEX/InDRE/14/2015 NS5 protein gene, partial cds134213427%0.099%KU556802.1Select seq gb|AF013415.1|Zika virus strain MR-766 NS5 protein (NS5) gene, partial cds1315131510%0.088%AF013415.1Select seq gb|KT200609.1|Zika virus isolate BR/949/15 NS5 gene, partial cds124512456%0.099%KT200609.1Select seq gb|KU232300.1|Zika virus isolate 067ZV_PEBR15 NS5 protein gene, partial cds123412346%0.099%KU232300.1Select seq gb|KU232290.1|Zika virus isolate 036ZV_PEBR15 NS5 protein gene, partial cds122512256%0.099%KU232290.1Select seq gb|KU232297.1|Zika virus isolate 049ZV_PEBR15 NS5 protein gene, partial cds122312236%0.099%KU232297.1Select seq gb|KU232294.1|Zika virus isolate 061ZV_PEBR15 NS5 protein gene, partial cds121612166%0.099%KU232294.1Select seq gb|KU232292.1|Zika virus isolate 054ZV_PEBR15 NS5 protein gene, partial cds121312136%0.099%KU232292.1Select seq gb|KU232298.1|Zika virus isolate 050ZV_PEBR15 NS5 protein gene, partial cds120912096%0.099%KU232298.1Select seq gb|KU232293.1|Zika virus isolate 057ZV_PEBR15 NS5 protein gene, partial cds120712076%0.099%KU232293.1Select seq gb|KU232296.1|Zika virus isolate 045ZV_PEBR15 NS5 protein gene, partial cds120512056%0.099%KU232296.1Select seq gb|KU232295.1|Zika virus isolate 068ZV_PEBR15 NS5 protein gene, partial cds120212026%0.099%KU232295.1Select seq gb|KU232288.1|Zika virus isolate 001ZV_PEBR15 NS5 protein gene, partial cds119111916%0.099%KU232288.1Select seq gb|KU232289.1|Zika virus isolate 020ZV_PEBR15 NS5 protein gene, partial cds118711876%0.099%KU232289.1Select seq gb|KX101063.1|Zika virus isolate Bahia05, partial genome1186742542%0.099%KX101063.1Select seq gb|KU232299.1|Zika virus isolate 015ZV_PEBR15 NS5 protein gene, partial cds118411846%0.099%KU232299.1Select seq gb|KX101065.1|Zika virus isolate Bahia15, partial genome1180777146%0.099%KX101065.1Select seq gb|KU232291.1|Zika virus isolate 051ZV_PEBR15 NS5 protein gene, partial cds118011806%0.099%KU232291.1Select seq gb|KU758878.1|Zika virus polyprotein gene, partial cds113911396%0.099%KU758878.1Select seq gb|KF270886.1|Zika virus strain CCB-870 envelope glycoprotein gene, partial cds107210728%0.088%KF270886.1Select seq gb|KX101062.1|Zika virus isolate Bahia04, partial genome1054733241%0.097%KX101062.1Select seq gb|KU867812.1|Zika virus isolate Jiangxi.CHN/01/2016 nonstructural protein 5 gene, partial cds101810185%0.0100%KU867812.1 Link to comment Share on other sites More sharing options...
niman Posted June 3, 2016 Author Report Share Posted June 3, 2016 Sequence map updatehttps://www.google.com/maps/d/u/0/edit?hl=en&mid=1XSxKe6FIecV8f33cQwyc7uylxeU Link to comment Share on other sites More sharing options...
niman Posted June 4, 2016 Author Report Share Posted June 4, 2016 Circular Cladogram 2753 BP from codon 1 Link to comment Share on other sites More sharing options...
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