niman Posted June 18, 2016 Report Posted June 18, 2016 Beijing CDC has released four full 2016 Yellow Fever Virus (YFV) sequences from infected travelers returning from Angola.
niman Posted June 18, 2016 Author Report Posted June 18, 2016 LOCUS KX010994 10823 bp RNA linear VRL 08-MAY-2016 DEFINITION Yellow fever virus isolate CIC1, complete genome. ACCESSION KX010994 VERSION KX010994.1 GI:1024994369 KEYWORDS . SOURCE Yellow fever virus (YFV) ORGANISM Yellow fever virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus; Yellow fever virus group. REFERENCE 1 (bases 1 to 10823) AUTHORS Pan,Y., Cui,S., Huo,D., Lyu,Y., Li,J., Chen,L., Wang,Q., Tian,L., Dou,X., Li,X., Sun,Y., Lu,G., Du,Y., Li,S. and Li,X. TITLE Direct Submission JOURNAL Submitted (25-MAR-2016) Department of Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevetion and Control, 16 Hepingli Middle Street, Dongcheng District, Beijing 100013, China COMMENT ##Assembly-Data-START## Assembly Method :: samtools v. v1.2 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10823 /organism="Yellow fever virus" /mol_type="genomic RNA" /isolate="CIC1" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:11089" /country="China" /collection_date="11-Mar-2016" /note="clinical-imported case 1" CDS 121..10359 /note="gp1" /codon_start=1 /product="polyprotein" /protein_id="ANC33489.1" /db_xref="GI:1024994370" /translation="MSGRKAQGRTLGVNMVRRGVRSLSNKIKQKTKQIGNRPGPSRGV QGFIFFFLFNILTGKKLTAHLKKLWRMLDPRQGLAVLRKVKRVVASLMRGLSSRKRRS NEMAMFPLLLLGLLALSGGVTLVRKNRWLLLNVTAEDLGKTFSVGTGNCTTNILEAKY WCPDSMEYNCPNLSPREEPDDIDCWCYGVENVRVAYGRCDAVGRSKRSRRAIDLPTHE NHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQRVVIALL VLAVGPAYSAHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVA IDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGL FGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALS GSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGG IWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHV SCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADD LTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIG KLFTQTMKGAERLAVMGDAAWDFSSAGGFFTSVGKGIHTVFGSAFQGLFGGLSWITKV IMGAVLIWVGINTRNMTMSMSMILVGVIMMFLSLGVGADQGCAVNFGKRELKCGDGIF VFRDSDDWLTKYSYYPEDPVKLASIIKASHEEGKCGLNSVDSLEHEMWRSRADEINAI FEENEVDISVVVQDPKNIYQRGTHPFSRIRDGLQYGWKTWGKNLVFSPGRKNGSFIID GKSRKECPFSNRVWNSFQIEEFGMGVFTTRVFMDATFDYSVDCDGAILGAAVNGKKSA HGSPTFWMGSHEVNGTWMIHTLETLDYKECEWPLTHTIGTSVEESDMFMPRSIGGPVS SHNRIPGYKVQTNGPWMQVPLEVKREVCPGTSVVVDSNCDGRGKSTRSTTDSGKIIPE WCCRSCTMPPVSFHGSDGCWYPMEIRPMKTSDSHLVRSWVTAGEVHAVPFGLVSMMIA MEVVLRRRQGPKQMLVGGVVLLGAMLVGQVTVLDLVKFVVAVGLHFHEINNGGDAMYM ALIASFSIRPGLLMGFGLRTLWSPRERLVMAFGAAMVEIALGGMMGGLWQYLNAVSLC VLTINAISSRKASNMILPLMALMTPMTMHEVRMATMLFCTVVIIGVLHQNSKDTSMQK TIPIVALTLTSYMGLTQPFLGLCAYMSTQVFGRRSIPVNEALAAAGLVGVLAGLAFQD MENFLGPIAVGGILMMLVSVAGRVDGLELKKLGEISWEEEAEISGSSSRYDVALSEQG EFKLLSEDKVPWDQIVMTSLALVGAAIHPFALLLVLGGWILHIKGARRSGDVLWDIPT PKVIEECEHLEDGIYGIFQSTFLGASQRGVGVAQGGVFHTMWHVTRGAFLLRNGKKLV PSWASVKEDLVAYGGSWKLDGRWDGEEEVQLIAAVPGKSVVNVQTKPSLFRVKNGGEI GAVALDYPSGTSGSPIVNRNGEVVGLYGNGILVGDNSFVSAISQTELKEESKEELQEI PTMLKKGMTTILDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFQG LDVKFHTQAFSAHGSGKEVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIA ARGWAAHRARANESATILMTATPPGTSDEFPHSNGEIEDVQTDIPSEPWTTGHEWILA DKRPTAWFLPSIRAANVMAASLRKAGKNVVVLNRKTFEKEYPTIKQKKPDFILATDIA EMGANLCVERVLDCRTAYKPVLVDEGKKVAIKGPLRISASSAAQRRGRIGRNPNRDGD SYYYSEPTSEDNAHHVCWLEASMLLDNMEVRGGMVAPLYGIEGTKTPVSPGEMRLRDD QRRVFRELVRGCDLPVWLAWQVAKAGLKTNDRKWCFEGPEEHEILNDNGETVKCRSPG GAKRALRPRWCDERVSSDQSALADFIKFAEGRRGAAEMLVILTELPDFLAKKGGEAMD TISVFLHSEEGSRAYRNALSMMPEAMTIVMLFLLAGLLTSGAVIFFMSPKGMSRMSMA MGTMAGSGYLMFLGGVKPTHISYVMLIFFVLMVVIIPEPGQQRSIQDNQVAYLIIGIL TLLSVVAANELGMLEKTKEDFFGKRDITTPSGAIPWSWPDLDLKPGAAWTVYVGIVTM LSPMLHHWIKVEYGNLSLSGIAQSASVLSFMDKGIPFMKMNISVVILLVSGWNSITVI PLLCGIGGAMLHWTLILPGIKAQQSKLAQKRVFHGVAKNPVVDGNPTADIEEAPEMPA LYEKKLALYLLLALSLMSVAMCRTPFSLAEGIVLSSAALGPLIEGNTSLLWNGPMAVS MTGVMRGNYYAFVGVMYNLWKMKTERRGRASGKTLGEVWKRELNLLDKQQFEMYKRTD IIEVDRDMARRHLAEGKVDTGVAVSRGTAKLRWFHERGYVKLEGRVTDLGCGRGGWCY YAAAQKEVSGVKGYTLGRDGHEKPMNVQSLGWNIVTFKDKTDIHRLEPLKCETLLCDI GESSPSSATEGERTLRVLDTVEKWLACGVDNFCIKVLAPYMPDVIEKLELLQRRFGGT VIRNPLSRNSTHEMYYVSGARSNITFTVNQTSRLLMRRMRRPTGKVTLEADVILPIGT RSVETDKGPLDKDAIEERVERIKNEYATTWFYDNDNPYRTWHYCGSYVTKTSGSAASM INGVIKILTFPWDRIEEVTRMAMTDTTPFGQQRVFKEKVDTRAKDPPAGTRKIMKVVN RWLFRHLSREKNPRLCTKEEFIAKVRSHAAVGAFLEEQEQWKTANEAVQDPKFWEMVD AERKLHQQGRCQSCVYNMMGKREKKLSEFGKAKGSRAIWYMWLGARFLEFEALGFLNE DHWASRENSGGGVEGIGLQYLGYVIRDLSTKEGGGFYADDTAGWDTRITEADLDDEQE IMSYMSPEQRKLAWAIMEMTYKNKVVKVLRPAPGGKAFMDIISRRDQRGSGQVVTYAL NTITNLKVQLIRMAEAEMVINHQHVQECGENVLERLETWLAENGCDRLSRMAVSGDDC VVRPVDDRFGLALSHLNAMSKVRKDISEWQPSKGWTDWENVPFCSHHFHELVLKDGRK IVVPCRDQDELIGRGRVSPGNGWMIKETACLSKAYANMWSLMYFHKRDMRLLSFAVSS AVPTAWVPSGRTTWSVHGRGEWMTTEDMLDVWNRVWVLNNPHMTDKTTIKEWRDVPYL TKRQDKLCGSLIGMTNRATWASHIHLVIHRIRTLIGQEKFTDYLTVMDRYSVDADLQP GELI" ORIGIN 1 agtaaatccc tgggtgctaa ttgaggtgca ttggtctgca aatcgagttg ctaggcaata 61 aacacatttg gattaatttt aatcgttcgt tgagcgatta gcagagaact gaccagagaa 121 atgtctggtc gaaaagctca gggtagaacc ctgggcgtca atatggtaag acgaggggtt 181 cgctccttgt caaacaaaat aaaacaaaaa acaaaacaga ttggaaacag acctggccct 241 tcaagaggtg ttcaaggatt tattttcttc tttttgttta acattctgac tgggaaaaag 301 ttgactgctc atctaaaaaa actttggagg atgcttgatc caaggcaggg acttgctgta 361 ctgcgaaagg tcaaaagagt tgtagctagc ttaatgagag ggctgtcttc caggaaacgt 421 agatccaatg aaatggccat gtttccactc ctgttactgg gtttgttggc tctatcagga 481 ggagtgaccc tcgtcagaaa gaacagatgg ttgctcttga atgtaactgc tgaagacctg 541 gggaaaacgt tttcagtggg aactgggaat tgcaccacga atattctgga agcaaaatac 601 tggtgccccg actcaatgga gtacaattgt cccaatctca gtccaagaga agagccagat 661 gacatagatt gctggtgtta tggagtggaa aatgtcagag tggcctatgg aagatgtgat 721 gcggtagggc gatcaaaacg ctccaggaga gcgattgatc tacccacaca tgagaaccat 781 ggactaaaga ctcggcagga gaagtggatg acaggcagaa tgggtgagag gcagctccag 841 aagattgaaa gatggctggt taggaatcca ttttttgcgg tcacagcatt ggcaatagcc 901 tatctggtgg gtaacaacac gacacaacga gtggtcatag cactactggt tctagcggtt 961 ggtccagcgt actctgccca ttgcataggg ataaccgaca gagatttcat tgaaggtgtc 1021 catgggggca cttgggtgtc agccactctg gagcaggaca aatgcgtgac tgtaatggcc 1081 cctgacaaac cttctctgga catctcacta caaacagtgg caatcgatgg accggctgaa 1141 gcgaggaagg tttgctacag tgcagtccta acccatgtga agatcaatga caaatgcccg 1201 agcactggtg aggcccacct tgcagaggaa aatgatggtg acaatgcttg taaacggaca 1261 tattctgaca gaggctgggg caatggctgt ggtctttttg ggaaaggaag catcgtggct 1321 tgtgccaagt ttacatgtgc caaatctatg agtctctttg aggtggatca gaccaaaatt 1381 caatatgtca tcagggctca gctccatgtg ggtgccaaac aggaaaactg gaacacagac 1441 ataaaaacgc tgaaatttga tgctctttct ggctcacagg aggctgaatt cactggttat 1501 ggaaaagcaa cactggagtg tcaggtccag actgccgtgg actttgggaa cagctacatc 1561 gcagagatgg aaaaagatag ctggatcgtt gaccgccaat gggcacagga cttgacactg 1621 ccatggcaga gtgggagtgg tggcatatgg agagaaatgc accaccttgt tgagtttgag 1681 cccccacatg ctgccacaat tagggtgctg gccttgggca atcaagaagg ctccttgaag 1741 accgctctca caggcgctat gcgcgtcacc aaggatgaga atgacaacaa cttgtacaaa 1801 ctgcacggtg gtcacgtctc ctgtagagtg aaactgtcag ctctcactct caaaggaaca 1861 tcctacaaga tgtgtacaga caagatgtca tttgtcaaga atccaacgga tacagggcat 1921 ggcacagttg tcatgcaagt aaaggtcccc aaaggggccc catgcaagat tcccgtgatt 1981 gtggcagatg acctaacggc tgcggtgaac aaaggcatct tggtcactgt caatcctatt 2041 gcatccacaa atgatgatga agttctgatt gaggtcaatc ccccttttgg ggatagctac 2101 atcatagttg ggactggaga ttcacgactg acctatcagt ggcacaaaga agggagttca 2161 ataggaaaat tgtttacaca gacaatgaaa ggagctgaac gtcttgcagt gatgggtgat 2221 gctgcttggg attttagttc tgctgggggg ttcttcacat ctgtgggaaa aggaatccat 2281 accgtgtttg gctcggcctt ccaggggctg tttggtggct tgagttggat cacgaaagtc 2341 atcatgggag ccgtgctcat ctgggtggga ataaacaccc gcaacatgac catgtccatg 2401 tccatgatct tggtaggtgt gatcatgatg tttctttcac taggagttgg ggctgaccaa 2461 ggatgtgctg ttaactttgg gaaacgcgag ctcaaatgcg gagatggcat ctttgtgttt 2521 agagactctg atgactggct cacaaagtac tcatactatc ctgaagaccc tgtcaaattg 2581 gcatccatta ttaaagcctc ccacgaggag ggcaaatgtg gattgaattc agttgattcc 2641 ctcgaacacg agatgtggag gagtagggcg gatgagatca acgccatttt tgaagaaaat 2701 gaggtagaca tctcggtcgt cgtccaagac ccaaagaaca tctatcaaag agggacccac 2761 ccgttctcaa ggatccgtga cggattgcag tatggatgga agacctgggg aaaaaacctt 2821 gttttctcac cagggaggaa gaacggcagc ttcatcattg acgggaagtc acgaaaggag 2881 tgccccttct ctaacagagt gtggaactca ttccagattg aggagtttgg catgggggtc 2941 ttcacaacac gagtttttat ggacgcgacc tttgactatt cagtggactg tgatggagcc 3001 atcctgggtg cagcggtgaa tggaaagaag agtgcccatg gatcacccac attttggatg 3061 ggaagtcatg aagtcaatgg aacgtggatg atacacactc tggaaactct tgattacaag 3121 gagtgtgaat ggccactgac acacactatt ggaacctcag tagaagaaag tgacatgttc 3181 atgccccggt ccattggagg tccggtgagt tctcacaacc gcatcccggg ttacaaggtg 3241 caaactaatg ggccatggat gcaagtccct ctggaagtaa aaagggaagt ctgtccaggg 3301 acaagcgtgg tggtggactc caactgtgat ggacgtggaa aatcaacaag atcaaccact 3361 gacagtggga aaataatccc ggaatggtgt tgcagatcct gtaccatgcc tccagtcagc 3421 ttccatggaa gcgatggttg ttggtatcct atggagatca gacccatgaa aacatccgac 3481 agccacctag tgaggtcctg ggtgactgca ggagaagttc atgcagtacc ctttgggctg 3541 gtgagcatga tgattgccat ggaggtggtg ttgcgcagaa ggcaaggacc aaaacaaatg 3601 ctggtaggag gagttgtgct gcttggagcg atgttagtgg gacaagtcac agtcttagac 3661 cttgtgaagt ttgttgtggc agtgggattg cacttccatg agattaacaa cggaggagat 3721 gccatgtaca tggcattaat tgccagcttt tccatccggc caggcctgct catgggcttt 3781 gggctgcgca cactgtggag tcctcgggag cgacttgtaa tggcatttgg agcagccatg 3841 gttgagattg ccctaggtgg aatgatgggt gggctttggc agtacttgaa cgccgtttca 3901 ctgtgtgtgc tcaccataaa tgcaatctca tcaaggaagg cctcaaatat gatcctcccc 3961 ctgatggcac tcatgactcc catgacaatg catgaggtga ggatggcgac gatgctgttc 4021 tgcactgttg tcataatagg ggtgcttcat cagaattcaa aagacacatc tatgcaaaag 4081 accattccca ttgtagccct gacactgacc tcatacatgg gcttgaccca gccctttcta 4141 gggctgtgtg catacatgtc cacgcaggtg tttggcagaa ggagtatacc tgtgaatgaa 4201 gccttggcag cggctggctt ggtgggagtg ctagcagggc tagccttcca agacatggaa 4261 aactttttgg gtccaatagc ggtggggggg atcctcatga tgctagttag tgtggcaggg 4321 agagttgatg gactagagct caagaaactt ggtgaaatct cctgggaaga agaagctgaa 4381 ataagtggaa gctctagccg ctatgatgtg gcactcagtg agcagggtga atttaaactc 4441 ctctcagagg acaaagtgcc ctgggaccag atagtaatga catccctagc cctcgtggga 4501 gcagccatac atccatttgc cctcttgctg gtcctgggag gatggatcct gcacattaaa 4561 ggtgctagga ggagtgggga tgttctttgg gacattccta cgccaaaggt gattgaggaa 4621 tgtgagcacc tggaggatgg aatctatggc atattccagt caaccttcct tggagcctcg 4681 cagcgaggtg ttggagtggc gcagggaggg gtcttccaca caatgtggca tgtcactagg 4741 ggggcattcc tcttgaggaa tggaaagaaa ctggttccgt cttgggcttc tgtgaaggaa 4801 gatctggtgg cttatggtgg ttcctggaaa ctagacggga gatgggatgg tgaggaggaa 4861 gtccaactca tcgctgctgt gcctggaaaa tctgttgtca acgttcaaac aaaaccaagc 4921 ttgttcagag tgaaaaatgg tggtgagatt ggagcagttg ctctagacta ccccagtgga 4981 acctcaggct cccccattgt gaaccgaaat ggtgaagtgg ttgggctcta tggcaatgga 5041 attctggtgg gtgataactc ctttgtgtct gccatctcac aaactgaatt gaaggaagaa 5101 tccaaagaag aactgcaaga aataccaact atgctgaaga aaggaatgac caccatcctt 5161 gacttccacc ctggggcggg gaaaacccgt aggttcctgc ctcaaatatt ggcggagtgt 5221 gccagaaggc gtttgcgcac tctggtatta gcacccacca gggttgtttt gtcagagatg 5281 aaagaagctt ttcaggggtt ggatgtgaaa ttccacacac aagctttctc agcccatggg 5341 agtgggaagg aggtcattga tgcaatgtgc catgcaaccc ttacatatag aatgctggaa 5401 ccaacaaggg tagtcaactg ggaggtcatt atcatggatg aggcgcactt cctggaccct 5461 gctagcatag cagcgagagg ctgggcggct catagagcaa gagcaaatga gagcgccacc 5521 atacttatga ccgccacccc accaggcacc agtgacgagt tccctcactc caatggtgag 5581 attgaggacg tccagactga catccccagc gagccatgga ccacaggaca tgaatggatc 5641 ttggcggaca agcgcccaac tgcatggttc cttccatcga tcagagcagc aaatgtcatg 5701 gcagcctcgc tgcggaaagc ggggaaaaat gtggtggtgc tgaataggaa aacctttgaa 5761 aaggagtacc ccaccattaa gcagaagaaa ccggatttca tacttgccac cgatatcgct 5821 gagatgggag caaacctgtg tgtggagaga gtcttggact gcagaactgc ctacaagcct 5881 gtcctggttg atgaagggaa gaaggtggcc atcaaagggc cgctacgaat ctcagcgtca 5941 tcggccgctc agaggagagg acgcattgga cgcaatccca acagagatgg tgactcttac 6001 tactactcag aacctaccag tgaggacaat gcacaccatg tgtgctggct ggaggcttcc 6061 atgctcctgg ataacatgga ggttagaggg gggatggttg ctccacttta tggcattgag 6121 ggaacaaaga ctcccgtctc tccaggagaa atgaggctaa gagatgatca gagaagggtc 6181 tttagagagt tggtgcgagg gtgtgatttg ccagtgtggt tggcatggca agtggcaaaa 6241 gccggcctga agaccaatga ccgcaaatgg tgttttgagg gtcccgaaga gcatgaaata 6301 ctcaatgaca atggtgaaac agtaaagtgt agatctccgg gcggagcaaa aagagcattg 6361 agacctagat ggtgtgacga gagagtttcc tcagaccaga gtgccttggc tgacttcatt 6421 aagtttgcag aaggtagaag aggggctgct gagatgcttg tgatcctcac ggagttgccc 6481 gacttcctgg caaagaaggg tggggaagcc atggatacca tcagtgtgtt cctacattct 6541 gaagagggtt caagagcgta cagaaatgcc ctgtcaatga tgccagaagc catgaccatt 6601 gtcatgctct tcctgcttgc cggactcttg acctcaggag cggtgatttt cttcatgtcg 6661 ccaaaaggca tgagtagaat gtcaatggca atgggtacca tggctggcag tggatatctc 6721 atgtttctgg ggggagtaaa accaacccac atctcttacg tcatgttaat attctttgtc 6781 ctcatggtcg tcataattcc cgaaccagga cagcagagat caatccagga taaccaagtt 6841 gcctacctca taattgggat cttgacattg ttatcagttg tggcagctaa tgaactaggg 6901 atgctggaga agaccaagga agattttttt ggaaagagag acatcacaac accaagtggg 6961 gctatcccat ggagttggcc tgacctggat ctgaaacctg gggcagcctg gacagtctat 7021 gtgggaatcg tgacgatgtt gtctcccatg ttacatcatt ggataaaagt tgagtatggc 7081 aatttgtcac tatcgggaat agcccaatct gcctcagttc tttcatttat ggacaaagga 7141 attcccttca tgaaaatgaa catatctgtg gtcatacttt tggtcagtgg ctggaattca 7201 atcacagtga tccctctgtt gtgcggcatt ggtggagcca tgttgcactg gacgctcata 7261 cttcctggga ttaaagccca gcaatcaaag ctggctcaaa aaagagtttt tcatggagtg 7321 gcaaaaaatc cagttgttga tggcaatcca actgctgaca ttgaggaagc cccagaaatg 7381 ccagctttat atgaaaagaa gctggctctt tacctccttc tggccctaag cctcatgtca 7441 gttgccatgt gcagaacccc tttttcctta gcggaaggaa tagtactgtc atctgccgcc 7501 cttggacctc tcattgaggg gaacactagt ctgttgtgga atggcccaat ggccgtttcc 7561 atgactggag tcatgcgtgg caactactac gcttttgtgg gagtcatgta caatctctgg 7621 aaaatgaaaa cagagcgtag agggagagca agtggaaaaa cattgggtga ggtctggaag 7681 cgtgaactta acttgctaga caaacaacaa tttgaaatgt acaaaagaac agacatcatt 7741 gaggtggacc gagacatggc acgacgacac ttggcagagg gaaaggtgga cacgggagtg 7801 gccgtgtcga gagggactgc aaagctgaga tggttccacg agcgtggcta tgtgaagcta 7861 gaaggaaggg tcaccgatct tgggtgtgga cgtggaggct ggtgctacta tgcagcagct 7921 caaaaagaag ttagtggtgt gaaggggtat acccttggca gagatggcca tgagaaacct 7981 atgaatgtcc aaagcttggg atggaatatt gtgactttta aggacaagac tgatattcac 8041 cgactggagc cactcaagtg tgaaactctc ctctgtgaca tcggagaatc gtccccatcc 8101 tccgcaactg agggtgagag gaccttaaga gttctggaca cagttgaaaa gtggttggct 8161 tgtggagtgg ataacttttg catcaaagtt ctggcaccat acatgcccga tgtgatagag 8221 aaactggagc ttcttcaaag aagattcggt ggaaccgtca tcaggaatcc tctttccagg 8281 aattccactc atgaaatgta ctacgtgtca ggagcaagaa gtaacatcac attcacagtc 8341 aatcagacat cacgcctgct gatgcgaagg atgaggcggc ccacaggcaa agttaccttg 8401 gaagctgatg tcattcttcc gataggcacg cgcagtgtgg aaactgataa aggcccattg 8461 gataaggatg ctattgagga aagagttgag agaatcaaga atgaatatgc cactacatgg 8521 ttctatgaca atgacaaccc gtatagaacg tggcattatt gtggctccta tgtgaccaaa 8581 acgtcaggaa gtgcagccag catgataaat ggagtcatca aaatcttgac ttttccatgg 8641 gacaggatag aagaagtcac aagaatggca atgactgaca ccacaccttt tggacaacaa 8701 agagttttca aggagaaagt agacacaaga gcaaaagacc ctcctgctgg aacaaggaag 8761 atcatgaagg tggtgaatag atggttgttt cggcatctgt ccagggagaa gaaccctagg 8821 ttgtgcacca aagaagagtt cattgccaaa gtgcggagcc atgccgcagt gggggctttt 8881 ctagaggagc aagagcagtg gaaaacggcc aatgaggcag tccaggatcc aaagttttgg 8941 gagatggtcg atgcagaacg caaacttcat cagcaggggc gatgccagtc ctgtgtgtac 9001 aacatgatgg gaaagaggga aaagaaactc tctgaatttg gaaaggccaa agggagccgt 9061 gctatctggt acatgtggct tggggcacgg tttcttgagt ttgaggctct tgggttctta 9121 aatgaagatc actgggcctc ccgggagaac tcggggggag gagttgaggg cataggactc 9181 cagtacttgg gctatgttat cagggacttg tcaaccaaag aaggtggagg gttttatgcg 9241 gatgacacgg cagggtggga cacacgcatc acagaagctg acctggatga cgagcaagag 9301 atcatgagtt acatgagccc tgaacaaagg aagctggcct gggctataat ggaaatgaca 9361 tacaagaaca aagtggttaa ggtgctgagg ccagccccag gaggcaaggc cttcatggac 9421 atcatcagcc ggagagacca aagggggtca ggacaagttg tgacatacgc cctcaacacc 9481 ataaccaatc taaaagtcca gctcataaga atggctgaag ctgaaatggt gattaaccat 9541 cagcatgtgc aggagtgtgg tgaaaatgtc ttagagcggc tcgaaacttg gcttgctgaa 9601 aatggatgtg acagattgag ccgaatggct gtgagtggag atgattgtgt ggtgagaccg 9661 gtggatgaca gatttggcct ggccctttcc catctcaatg caatgtccaa agttaggaag 9721 gacatttcag aatggcaacc ctccaaagga tggacagatt gggaaaatgt tcctttctgc 9781 tcccaccact tccatgaact ggtgttgaaa gatgggagga agatagtggt gccttgcaga 9841 gatcaagatg aactgatagg gagagggaga gtgtccccag gaaatggctg gatgatcaag 9901 gaaacagcct gcctcagcaa agcttatgca aacatgtggt cactgatgta cttccacaag 9961 agggacatga ggctactttc atttgctgtc tcctccgctg ttccaacagc ctgggtgccc 10021 agtggaagga caacgtggtc tgtccacgga agaggggagt ggatgacaac tgaggacatg 10081 ctagatgtct ggaacagggt gtgggtgttg aataacccgc acatgacgga caaaacaacc 10141 atcaaggagt ggagagatgt tccctacctc acaaagagac aggataagct ttgcgggtca 10201 ctgataggaa tgacaaacag ggccacatgg gcatctcaca tccaccttgt gatccaccgg 10261 atcagaactc taataggtca agagaagttc acagactacc tcaccgtcat ggacaggtat 10321 tctgttgatg ccgaccttca gccaggagag cttatttgag acattacaac atggaaaacc 10381 gggataaaaa ctacgggtgg agaaccggac tccccacttg agaaatgtaa ataagaaacc 10441 gggataaaaa caacggatgg agaaccggac tccacactga ataggttata aacgtcagcc 10501 caggatccaa aatttgaatg ggtcttgcca ccgctaagct gtgaggcggt gcgggctggg 10561 acagccgttt cccgggcaac gacatgcctg gtttctggga cttcccaacc cggagtaaaa 10621 cgaaggagcc tccgccacca ccctcccacg gggtgttgga aagatggggt ctagaggtta 10681 gaggagaccc tccagggaaa ttagtgggac catattgacg ccagggaaag accggagtgg 10741 ttctctgctt ttcctccagg ggtctgcgag cacagtttgc tctagaagaa gcagaccttt 10801 ggatgacaaa acacaaaacc act
niman Posted June 18, 2016 Author Report Posted June 18, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX010994.1|Yellow fever virus isolate CIC1, complete genome1846518465100%0.0100%KX010994.1Select seq gb|AY968064.1|Yellow fever virus strain Angola71, complete genome1809018090100%0.099%AY968064.1Select seq gb|KX027336.1|Yellow fever virus isolate CIC4, complete genome1800618006100%0.099%KX027336.1Select seq gb|KX010995.1|Yellow fever virus isolate CIC2, complete genome1800618006100%0.099%KX010995.1Select seq gb|KX010996.1|Yellow fever virus isolate CIC3, complete genome1796217962100%0.099%KX010996.1Select seq gb|DQ235229.1|Yellow fever virus strain Couma, complete genome1140011400100%0.085%DQ235229.1Select seq gb|AY968065.1|Yellow fever virus strain Uganda48a, complete genome1137611376100%0.085%AY968065.1Select seq gb|JN620362.1|Yellow fever virus strain Uganda 2010, complete genome1135311353100%0.085%JN620362.1Select seq gb|JF912179.1|Yellow fever virus strain BeAR378600, complete genome87908790100%0.079%JF912179.1Select seq gb|AY603338.1|Yellow fever virus strain Ivory Coast 1999, complete genome87878787100%0.079%AY603338.1Select seq gb|JF912186.1|Yellow fever virus strain BeH526722, complete genome87638763100%0.079%JF912186.1Select seq gb|JX898868.1|Yellow fever virus isolate HD117294 from Senegal, complete genome87588758100%0.079%JX898868.1Select seq gb|JF912184.1|Yellow fever virus strain BeH463676, complete genome87518751100%0.079%JF912184.1Select seq gb|JF912185.1|Yellow fever virus strain BeAR513008, complete genome87448744100%0.079%JF912185.1Select seq gb|AY572535.1|Yellow fever virus strain Gambia 2001, complete genome87428742100%0.079%AY572535.1Select seq gb|JF912183.1|Yellow fever virus strain BeH423602, complete genome87408740100%0.079%JF912183.1Select seq gb|JX898873.1|Yellow fever virus isolate ArD149214 from Senegal, complete genome87258725100%0.079%JX898873.1Select seq gb|JX898874.1|Yellow fever virus isolate ArD149194 from Senegal, complete genome87228722100%0.079%JX898874.1Select seq gb|KM388817.1|Yellow fever virus strain 2A polyprotein gene, complete cds87208720100%0.079%KM388817.1Select seq gb|JX898870.1|Yellow fever virus isolate ArD121040 from Senegal, complete genome87208720100%0.079%JX898870.1Select seq gb|JX898875.1|Yellow fever virus isolate ArD149815 from Senegal, complete genome87168716100%0.079%JX898875.1Select seq gb|KM388816.1|Yellow fever virus strain 10A polyprotein gene, complete cds87028702100%0.079%KM388816.1Select seq gb|JF912187.1|Yellow fever virus strain BeH622205, complete genome87028702100%0.079%JF912187.1Select seq gb|JF912188.1|Yellow fever virus strain BeH622493, complete genome86988698100%0.079%JF912188.1Select seq gb|JX898880.1|Yellow fever virus isolate ArD181564 from Senegal, complete genome86918691100%0.079%JX898880.1Select seq gb|JX898877.1|Yellow fever virus isolate ArD181464 from Senegal, complete genome86898689100%0.079%JX898877.1Select seq gb|JX898878.1|Yellow fever virus isolate ArD181250 from Senegal, complete genome86888688100%0.079%JX898878.1Select seq gb|JF912189.1|Yellow fever virus strain BeAR646536, complete genome86718671100%0.079%JF912189.1Select seq gb|JF912180.1|Yellow fever virus strain BeH394880, complete genome86688668100%0.079%JF912180.1Select seq gb|JX898876.1|Yellow fever virus isolate ArD156468 from Senegal, complete genome86668666100%0.079%JX898876.1Select seq gb|HM582851.1|Yellow fever virus strain TVP11767 polyprotein gene, complete cds86668666100%0.079%HM582851.1Select seq gb|AY640589.1|Yellow fever virus strain ASIBI, complete genome86648664100%0.079%AY640589.1Select seq gb|KF769016.1|Yellow fever virus strain Asibi, complete genome86618661100%0.079%KF769016.1Select seq gb|JF912190.1|Yellow fever virus strain BeH655417, complete genome86578657100%0.079%JF912190.1Select seq gb|KM388815.1|Yellow fever virus strain 9A polyprotein gene, complete cds86488648100%0.079%KM388815.1Select seq gb|KM388814.1|Yellow fever virus strain 6A polyprotein gene, complete cds86488648100%0.079%KM388814.1Select seq gb|JX898869.1|Yellow fever virus isolate DakArAmt7 from Cote d'Ivoire, complete genome86468646100%0.079%JX898869.1Select seq gb|JF912182.1|Yellow fever virus strain BeH422973, complete genome86308630100%0.079%JF912182.1Select seq gb|KF907504.1|Yellow fever virus strain 88/1999, complete genome86088608100%0.079%KF907504.1Select seq gb|KM388818.1|Yellow fever virus strain 8A polyprotein gene, complete cds86038603100%0.079%KM388818.1Select seq gb|U21056.1|YFU21056Yellow fever virus French viscerotropic strain, complete genome86018601100%0.079%U21056.1Select seq gb|JX898872.1|Yellow fever virus isolate ArD114972 from Senegal, complete genome85818581100%0.079%JX898872.1Select seq gb|JX898871.1|Yellow fever virus isolate ArD114896 from Senegal, complete genome85748574100%0.079%JX898871.1Select seq gb|U21055.1|YFU21055Yellow fever virus French neurotropic strain, complete genome85618561100%0.079%U21055.1Select seq gb|DQ100292.1|Yellow fever virus strain 17DD-Brazil, complete genome85528552100%0.079%DQ100292.1Select seq gb|U54798.1|YFU54798Yellow fever virus strain 85-82H Ivory Coast, complete genome85408540100%0.079%U54798.1Select seq gb|U17066.1|YFU17066Yellow fever virus vaccine strain 17DD, complete genome85348534100%0.079%U17066.1Select seq gb|GQ379162.1|Yellow fever virus strain case #1, complete genome85338533100%0.079%GQ379162.1Select seq emb|X03700.1|Yellow fever virus complete genome, 17D vaccine strain85298529100%0.079%X03700.1Select seq gb|KF769015.1|Yellow fever virus strain 17D-204, complete genome85258525100%0.078%KF769015.1Select seq gb|JN811143.1|Yellow fever virus 17D YF-VAX Vero adapted Series C P11, complete genome85258525100%0.078%JN811143.1Select seq gb|JX503529.1|Yellow fever virus strain YF/Vaccine/USA/Sanofi-Pasteur-17D-204/UF795AA/YFVax, complete genome85258525100%0.078%JX503529.1Select seq gb|JN628279.1|Yellow fever virus strain 17D RKI, complete genome85258525100%0.078%JN628279.1Select seq gb|AF052444.1|AF052444Yellow fever virus clone HONG8 polyprotein gene, complete cds85258525100%0.078%AF052444.1Select seq gb|JX949181.1|Yellow fever virus strain 17D polyprotein gene, complete cds85208520100%0.078%JX949181.1Select seq gb|GQ379163.1|Yellow fever virus strain case #2, complete genome85208520100%0.078%GQ379163.1Select seq gb|FJ654700.1|Yellow fever virus 17D/Tiantan, complete genome85208520100%0.078%FJ654700.1Select seq gb|DQ118157.1|Yellow fever virus isolate YF-AVD2791-93F/04 from Spain, complete genome85208520100%0.078%DQ118157.1Select seq emb|X15062.1|Yellow fever virus genomic RNA85208520100%0.078%X15062.1Select seq gb|AF052446.1|AF052446Yellow fever virus clone HONG10 polyprotein gene, complete cds85208520100%0.078%AF052446.1Select seq gb|AF052439.1|AF052439Yellow fever virus clone HONG3 polyprotein gene, complete cds85208520100%0.078%AF052439.1Select seq gb|AF052437.1|AF052437Yellow fever virus clone HONG1 polyprotein gene, complete cds85208520100%0.078%AF052437.1Select seq gb|U17067.1|YFU17067Yellow fever virus vaccine strain 17D-213, complete genome85208520100%0.078%U17067.1Select seq gb|JN811141.1|Yellow fever virus 17D YF-VAX Vero adapted Series A P11, complete genome85168516100%0.078%JN811141.1Select seq gb|AF052445.1|AF052445Yellow fever virus clone HONG9 polyprotein gene, complete cds85168516100%0.078%AF052445.1Select seq gb|AF052438.1|AF052438Yellow fever virus clone HONG2 polyprotein gene, complete cds85168516100%0.078%AF052438.1Select seq gb|JN811142.1|Yellow fever virus 17D YF-VAX Vero adapted Series B P11, complete genome85118511100%0.078%JN811142.1Select seq gb|AF094612.1|AF094612Yellow fever virus strain Trinidad 79A isolate 788379, complete genome84778477100%0.078%AF094612.1Select seq gb|JF912181.1|Yellow fever virus strain BeH413820, complete genome84038403100%0.078%JF912181.1Select seq gb|DQ322634.1|YFV replicon vector FMDV-2A-def, complete sequence8228834397%0.079%DQ322634.1Select seq gb|DQ322633.1|YFV replicon vector capsid-def, complete sequence8228834397%0.079%DQ322633.1Select seq gb|DQ322635.1|YFV replicon vector prME-def, complete sequence6551688781%0.078%DQ322635.1Select seq dbj|D14458.1|YFVCMENSYellow fever virus prM gene for precursor polyprotein, partial cds3162316234%0.080%D14458.1Select seq gb|AF052443.1|AF052443Yellow fever virus clone HONG7 polyprotein gene, partial cds2250225026%0.078%AF052443.1Select seq gb|GU951804.1|Yellow fever virus strain BeAn 131 polyprotein gene, partial cds2246224626%0.079%GU951804.1Select seq gb|AF052441.1|AF052441Yellow fever virus clone HONG5 polyprotein gene, partial cds2246224626%0.078%AF052441.1Select seq gb|AH005112.2|Yellow fever virus strain Y5 polyprotein and nonstructural protein NS2A mRNAs, partial cds2138251627%0.080%AH005112.2Select seq gb|DQ322638.1|VEEV replicon vector YFV-C2, complete sequence2129212922%0.080%DQ322638.1Select seq gb|AF052440.1|AF052440Yellow fever virus clone HONG4 polyprotein gene, partial cds2125212522%0.080%AF052440.1Select seq gb|L06480.1|YFVCAPSIDMYellow fever virus capsid protein, M protein, and envelope protein mRNAs2125212522%0.080%L06480.1Select seq gb|AY960140.1|Yellow fever virus strain ArB28153 polyprotein gene, partial cds2098209817%0.086%AY960140.1Select seq gb|DQ322642.1|VEEV replicon vector YFV-C3opt, complete sequence1929192922%0.078%DQ322642.1Select seq gb|DQ322640.1|VEEV replicon vector YFV-C3opt-NS2mut, complete sequence1929192922%0.078%DQ322640.1Select seq gb|U23578.1|YFU23578Yellow fever virus isolate SE7445/Uganda/1964/Human envelope protein (E) mRNA, partial cds1810181014%0.087%U23578.1Select seq gb|U23577.1|YFU23577Yellow fever virus isolate M-112/Sudan/1940/Human envelope protein (E) mRNA, partial cds1801180114%0.087%U23577.1Select seq gb|AY839636.1|Yellow fever virus strain ETH2777/Ethiopia61 envelope protein gene, partial cds1786178614%0.087%AY839636.1Select seq gb|DQ068260.1|Yellow fever virus strain SSUD03-01 envelope protein gene, partial cds1773177314%0.087%DQ068260.1Select seq gb|DQ068264.1|Yellow fever virus strain SSUD03-05 envelope protein gene, partial cds1768176814%0.087%DQ068264.1Select seq gb|DQ068263.1|Yellow fever virus strain SSUD03-04 envelope protein gene, partial cds1768176814%0.087%DQ068263.1Select seq gb|DQ068262.1|Yellow fever virus strain SSUD03-03 envelope protein gene, partial cds1768176814%0.087%DQ068262.1Select seq gb|U23569.1|YFU23569Yellow fever virus isolate 7914/Kenya/1993/Human envelope protein (E) mRNA, partial cds1764176414%0.086%U23569.1Select seq gb|U23575.1|YFU23575Yellow fever virus isolate KE93-477/Kenya/1993/Mosquito envelope protein (E) mRNA, partial cds1759175914%0.086%U23575.1Select seq gb|U23573.1|YFU23573Yellow fever virus isolate DaHB1504/C. African Republic/1985/Human envelope protein (E) mRNA, partial cds1755175514%0.086%U23573.1Select seq gb|AY839634.1|Yellow fever virus strain HB1782/CAR86 envelope protein gene, partial cds1750175014%0.086%AY839634.1Select seq gb|U23576.1|YFU23576Yellow fever virus isolate Kouma/Ethiopia/1961/Human envelope protein (E) mRNA, partial cds1745174514%0.086%U23576.1Select seq gb|AY960138.1|Yellow fever virus strain ArA 20628 polyprotein gene, partial cds1743174317%0.081%AY960138.1Select seq gb|U23571.1|YFU23571Yellow fever virus isolate ArB8883/C. African Republic/1977/Human envelope protein (E) mRNA, partial cds1732173214%0.086%U23571.1Select seq gb|AY960137.1|Yellow fever virus strain Ara29436 polyprotein gene, partial cds1710171017%0.081%AY960137.1Select seq gb|AY960139.1|Yellow fever virus strain Ara6734 polyprotein gene, partial cds1680168017%0.081%AY960139.1
niman Posted June 18, 2016 Author Report Posted June 18, 2016 LOCUS KX010995 10822 bp RNA linear VRL 08-MAY-2016 DEFINITION Yellow fever virus isolate CIC2, complete genome. ACCESSION KX010995 VERSION KX010995.1 GI:1024994385 KEYWORDS . SOURCE Yellow fever virus (YFV) ORGANISM Yellow fever virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus; Yellow fever virus group. REFERENCE 1 (bases 1 to 10822) AUTHORS Cui,S., Liang,Z., Li,J., Wang,Q., Chen,L., Li,X., Huo,D., Zheng,Y., Chen,Y., Zhang,L., Dou,X., Tian,L. and Sun,Y. TITLE Direct Submission JOURNAL Submitted (25-MAR-2016) Department of Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevetion and Control, 16 Hepingli Middle Street, Dongcheng District, Beijing 100013, China COMMENT ##Assembly-Data-START## Assembly Method :: samtools v. v1.2 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10822 /organism="Yellow fever virus" /mol_type="genomic RNA" /isolate="CIC2" /isolation_source="urine" /host="Homo sapiens" /db_xref="taxon:11089" /country="China" /collection_date="17-Mar-2016" /note="clinical-imported case 2" CDS 119..10357 /note="gp1" /codon_start=1 /product="polyprotein" /protein_id="ANC33490.1" /db_xref="GI:1024994386" /translation="MSGRKAQGRTLGVNMVRRGVRSLSNKIKQKTKQIGNRPGPSRGV QGFIFFFLFNILTGKKLTAHLKKLWRMLDPRQGLAVLRKVKRVVASLMRGLASRKRRS NEMAMVPLLLLGLLALSGGVTLVRKNRWLLLNVTAEDLGKTFSVGTGNCTTNILEAKY WCPDSMEYNCPNLSPREEPDDIDCWCYGVENVRVAYGRCDAVGRSKRSRRAIDLPTHE NHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQRVVIALL VLAVGPAYSAHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVA IDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGL FGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALS GSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGG IWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHV SCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADD LTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIG KLFTQTMKGAERLAVMGDAAWDFSSAGGFFTSVGKGIHTVFGSAFQGLFGGLSWITKV IMGAVLIWVGINTRNMTMSMSMILVGVIMMFLSLGVGADQGCAVNFGKRELKCGDGIF VFRDSDDWLTKYSYYPEDPVKLASIIKASHEEGKCGLNSVDSLXHEMWRSRADEINAI FEENEVDISVVVQDPKNIYQRGTHPFSRIRDGLQYGWKTWGKNLVFSPGRKNGSFIID GKSRKECPFSNRVWNSFQIEEFGMGVFTTRVFMDATFDYSVDCDGAILGAAVNGKKSA HGSPTFWMGSHEVNGTWMIHTLETLDYKECEWPLTHTIGTSVEESDMFMPRSIGGPVS SHNRIPGYKVQTNGPWMQVPLEVKREVCPGTSVVVDSNCDGRGKSTRSTTDSGKIIPE WCCRSCTMPPVSFHGSDGCWYPXEIRPMRTSDSHLVRSWVTAGEVHAVPFGLVSMMIA MEVVLRRRQGPKQMLVGGVVLLGAMLVGQVTVLDLVKFVVAVGLHFHEINNGGDAMYM ALIASFSIRPGLLMGFGLRTLWSPRERLVMAFGAAMVEIAXGGMMGGLWQYLNAVSLC VLTINAISSRKASNMILPLMALMTPMTMHEVRMATMLFCTVVIIGVLHQNSKDTSMQK TIPIVALTLTSYMGLTQPFLGLCAYMSTQVFGRRSIPVNEALAAAGLVGVLAGLAFQD MENFLGPMAVGGILMMLVSVAGRVDGLELRKLGEISWEEEAEISGSSSRYDVALSEQG EFKLLSEDKVPWDQIVMTSLALVGAAIHPFALLLVLGGWILHIKGARRSGDVLWDIPT PKVIEECEHLEDGIYGIFQSTFLGASQRGVGVAQGGVFHTMWHVTRGAFLLRNGKKLV PSWASVKEDLVAYGGSWKLDGRWDGEEEVQLIAAVPGKSVVNVQTKPSLFKVKNGGEI GAVALDYPSGTSGSPIVNRNGEVVGLYGNGILVGDNSFVSAISQTELKEESKEELQEI PTMLKKGMTTILDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFQG LDVKFHTQAFSAHGSGKEVIDAMCHATLTYRMLEPTRVVNWEVIIMDEXHFLDPASIA ARGWAAHRARAXESATILMTATPPGTSDEFPHSNGEIEDVQTDIPSEPWTTGHEWILA DKRPTAWFLPSIRAANVMAASLRKAGKNVVVLNRKTFEKEYPTIKQKKPDFILATDIA EMGANLCVERVLDCRTAYKPVLVDEGKKVAIKGPLRISASSAAQRRGRIGRNPNRDGD SYYYSEPTSEDNAHHVCWLEASMLLDNMEVXGGMVAPLYGIEGTKTPVSPGEMRLRDD QRRVFRELVRGCDLPVWLAWQVAKAGLKTNDRKWCFEGPEEHEILNDNGETVKCRSPG GAKRALRPRWCDERVSSDQSALADFIKFAEGRRGAAEMLVILTELPDFLAKKGGEAMD TISVFLHSEEGSRAYRNALSMMPEAMTIVMLFLLAGLLTSGAVIFFMSPKGMSRMSMA MGTMAGSGYLMFLGGVKPTHISYVMLIFFVLMVVIIPEPGQQRSIQDNQVAYLIIGIL TLLSVVAANELGMLEKTKEDFFGKRDIXTPSGAIPWSWPDLDLKPGAAWTVYVGIVTM LSPMLHHWIKVEYGNLSLSGIAQSASVLSFMDKGIPFMKMNISVVILLVSGWNSITVI PLLCGIGGAMLHWTLILPGIKAQQSKLAQKRVFHGVAKNPVVDGNPTADIEEAPEMPA LYEKKLALYLLLALSLMSVAMCRTPFSLAEGIVLSSAALGPLIEGNTSLLWNGPMAVS MTGVMRGNYYAFVGVMYNLWKMKTGRRGRASGKTLGEVWKRELNLLDKQQFEMYKRTD IIEVDRDMARRHLAEGKVDTGVAVSRGTAKLRWFHERGYVKLEGRVTDLGCGRGGWCY YAAAQKEVSGVKGYTLGRDGHEKPMNVQSLGWNIVTFKDKTDIHRLEPLKCETLLCDI GESSPSSATEGERTLRVLDTVEKWLACGVDNFCIKVLAPYMPDVIEKLELLQRRFGGT VIRNPLSRNSTHEMYYVSGARSNITFTVNQTSRLLMRRMRRPTGKVTLEADVILPIGT RSVETDKGPLDKDAIEERVERIKNEYATTWFYDNDNPYRTWHYCGSYVTKTSGSAASM INGVIKILTFPWDRIEEVTRMAMTDTTPFGQQRVFKEKVDTRAKDPPAGTRKIMKVVN RWLFRHLSREKNPRLCTKEEFIAKVRSHAAVGAFLEEQEQWKTANEAVLDPKFWEMVD AERKLHQQGRCQSCVYNMMGKREKKLSEFGKAKGSRAIWYMWLGARFLEFEALGFLNE DHWASRENSGGGVEGIGLQYLGYVIRDLSTKEGGGFYADDTAGWDTRITEADLDDEQE IMSYMSPEQRKLAWAIMEMTYKNKVVKVLRPAPGGKAFMDIISRRDQRGSXQVVTYAL NTITNLKVQLIRMAEAEMVINHQHVQECGENVLERLETWLAENGCDRLSRMAVSGDDC VVRPVDDRFGLALSHLNAMSKVRKDISEWQPSKGWTDWENVPFCSHHFHELVLKDGRK IVVPCRDQDELIGRGRVSPGNGWMIKETACLSKAYANMWSLMYFHKRDMRLLSFAVSS AVPTAWVPSGRTTWSVHGRGEWMTTEDMLDVWNRVWVLNNPHMTDKTTIKEWRDAPYL TKRQDKLCGSLIGMTNRATWASHIHLVIHRIRTLIGQEKFTDYLTVMDRYSVDADLQP GELI" ORIGIN 1 taaatccctg ggtgctaatt gaggtgcatt ggtctgcaaa tcgagttgct aggcaataaa 61 cacatttgga ttaattttaa tcgttcgttg agcgattagc agagaactga ccagagaaat 121 gtctggtcga aaagctcagg gtagaaccct gggcgtcaat atggtaagac gaggggttcg 181 ctccttgtca aacaaaataa aacaaaaaac aaaacagatt ggaaacagac ctggcccttc 241 aagaggtgtt caaggattta ttttcttctt tttgtttaac attctgactg ggaaaaagtt 301 gactgctcat ctaaaaaaac tctggaggat gcttgatcca aggcaggggc ttgctgtact 361 gcgaaaggtc aaaagagttg tagctagctt aatgagaggg ctggcttcca ggaaacgtag 421 atccaatgaa atggccatgg taccactcct gttactgggt ttgttggctc tatcaggagg 481 agtgaccctc gtcagaaaga acagatggtt gctcctgaat gtaactgctg aagacctggg 541 gaaaacgttt tcagtgggaa ctgggaattg caccacgaat attctggaag caaaatactg 601 gtgccccgac tcaatggaat acaattgccc caatctcagt ccaagagaag agccagatga 661 catagattgc tggtgttatg gagtggaaaa tgtcagagtg gcctatggaa gatgtgatgc 721 ggtagggcga tcaaaacgct ccaggagagc gattgatcta cccacacatg agaaccatgg 781 actaaagact cggcaggaga agtggatgac aggcagaatg ggtgagaggc agctccagaa 841 gattgaaaga tggctggtta ggaatccatt ttttgcggtc acagcattgg caatagccta 901 tctggtgggt aacaacacga cacaacgagt ggtcatagca ctactggttc tagcggttgg 961 tccagcgtac tctgcccatt gcatagggat aaccgacaga gatttcattg aaggtgtcca 1021 tgggggcact tgggtgtcag ccactctgga gcaggacaaa tgcgtgactg taatggcccc 1081 tgacaaacct tctctggaca tctcactaca aacagtggca atcgatggac cggctgaagc 1141 gaggaaggtt tgctacagtg cagtcctaac ccatgtgaag atcaatgaca aatgcccgag 1201 cactggtgag gcccaccttg cagaggaaaa tgatggtgac aatgcttgta aacggacata 1261 ttctgacaga ggctggggca atggctgtgg tctttttggg aaaggaagca tcgtggcttg 1321 tgccaagttt acatgtgcca aatctatgag tctctttgag gtggatcaga ccaaaatcca 1381 atatgtcatc agggcccagc tccatgtggg tgctaaacag gaaaactgga acacagacat 1441 aaaaacgctg aaatttgatg ctctttctgg ctcacaggag gctgaattca ctggttatgg 1501 aaargcaaca ctagagtgtc aggtccagac tgccgtggac tttgggaaca gctacatcgc 1561 agagatggaa aaagatagct ggatcgttga ccgccaatgg gcacaggact tgacactgcc 1621 atggcagagt gggagtggtg gcatatggag agaaatgcac caccttgttg agtttgagcc 1681 cccacatgct gccacaatta gggtgctggc cttgggcaat caagaaggct ccttgaagac 1741 cgctctcaca ggcgctatgc gcgtcaccaa ggatgagaat gacaacaact tgtacaaact 1801 gcacggtggt cacgtctcct gtagagtgaa actgtcagcc ctcactctca aaggaacatc 1861 ctacaagatg tgcacagaca aaatgtcatt tgtcaagaat ccaacggata cagggcatgg 1921 cacagttgtc atgcaagtaa aggtccccaa aggggcccca tgcaagattc ccgtgattgt 1981 ggcagatgac ctaacggcag cagtgaacaa aggcatcttg gtcactgtca atcctattgc 2041 atccacaaat gatgatgaag ttctgattga ggtcaatccc ccttttgggg atagctacat 2101 catagttggg actggagact cacgactgac ctatcagtgg cacaaagaag ggagttcaat 2161 aggaaaattg ttcacacaga caatgaaagg agctgaacgt cttgcagtga tgggtgatgc 2221 tgcttgggat tttagttctg ctggggggtt cttcacatct gtgggaaaag gaatccatac 2281 cgtgtttggc tcggccttcc aggggctgtt tggtggcttg agttggatca cgaaagtcat 2341 catgggagcc gtgctcatct gggtgggaat aaacacccgc aacatgacca tgtccatgtc 2401 catgatcttg gtaggtgtga tcatgatgtt tctttcacta ggagttgggg ctgaccaagg 2461 atgtgctgtt aactttggga aacgcgagct caaatgcgga gatggcatct ttgtgtttag 2521 agactctgat gactggctca caaagtactc atactatcct gaagaccctg tcaaattggc 2581 atccatcatt aaagcctccc acgaggaggg caaatgtgga ttgaattcag ttgattccct 2641 cgamcacgag atgtggagga gtagggcgga tgagatcaac gccatttttg aagaaaatga 2701 agtagacatc tcggtcgtcg tccaagaccc aaagaacatc taccaaagag ggacccaccc 2761 gttctcaagg atccgtgacg gattgcagta tggatggaag acctggggaa aaaaccttgt 2821 tttctcacca gggaggaaga acggcagctt catcattgac gggaagtcac gaaaggagtg 2881 ccccttctct aacagagtgt ggaactcatt ccagattgag gagtttggca tgggggtctt 2941 cacaacacga gtktttatgg acgcgacctt tgactattca gtggactgtg atggagccat 3001 cctgggtgca gcggtgaatg gaaagaagag tgcccatgga tcacccacat tttggatggg 3061 aagtcatgaa gtcaatggaa cgtggatgat acacactttg gaaactcttg attacaagga 3121 gtgtgaatgg ccactgacac acactattgg aacctcagta gaagaaagtg acatgttcat 3181 gccccggtcc attggaggtc cggtgagttc tcacaaccgc atcccgggtt acaaggtgca 3241 aaccaatggg ccatggatgc aagtccccct ggaagtaaaa agggaagtct gtccagggac 3301 aagcgtggtg gtggactcca actgtgatgg acgtggaaaa tcaacgagat caaccactga 3361 cagtgggaaa ataatcccgg aatggtgttg cagatcttgt actatgcctc cagtcagctt 3421 ccatggaagc gatggttgtt ggtatcctay ggagatcaga cccatgagaa catccgacag 3481 ccacctagtg agatcctggg tgactgcagg agaagttcat gcagtaccct ttggactggt 3541 gagcatgatg attgccatgg aggtggtgtt gcgcagaagg caaggaccaa aacaaatgct 3601 ggtaggagga gttgtgctgc ttggagcgat gttagtggga caagtcacag tcttagacct 3661 tgtgaagttt gttgtggcag tgggattgca cttccatgaa attaataacg gaggagatgc 3721 catgtacatg gcattgattg ccagcttttc catccggcca ggcctgctca tgggctttgg 3781 gctgcgcaca ctgtggagtc ctcgcgagcg acttgtaatg gcatttggag cagccatggt 3841 tgagattgcc ttmggtggaa tgatgggtgg gctttggcag tacttgaacg ccgtttcact 3901 gtgtgtgctc accataaatg caatctcatc aaggaaggcc tcaaatatga tcctccccct 3961 gatggcactc atgactccca tgacaatgca tgaggtgagg atggcgacga tgctgttctg 4021 cactgttgtc ataatagggg tgcttcatca gaattcaaaa gacacatcta tgcaaaagac 4081 cattcccatt gtagccctga cactgacctc atacatgggc ttgacccagc cctttctagg 4141 gctgtgtgca tacatgtcca cgcaggtgtt tggcagaagg agtatacctg tgaatgaagc 4201 cttggcagcg gctggcttgg tgggagtgct agcagggcta gccttccaag acatggaaaa 4261 ctttttgggt ccaatggcgg tgggggggat cctcatgatg ttagttagtg tggcagggag 4321 agttgatgga ctagagctca ggaaacttgg tgaaatctcc tgggaagaag aagctgaaat 4381 aagtggaagc tctagccgct atgatgtggc actcagtgag cagggtgaat ttaaactcct 4441 ctcagaggac aaagtgccct gggaccagat agtaatgaca tccctagccc tcgtgggagc 4501 agccatacat ccatttgccc tcttgctggt cttgggagga tggatcctgc acattaaagg 4561 tgctaggagg agtggggatg ttctttggga cattcctacg ccaaaggtga ttgaggaatg 4621 tgagcacctg gaggatggga tctatggcat atttcagtca accttccttg gagcctcgca 4681 gcgaggtgtt ggagtggcgc agggaggggt cttccacaca atgtggcatg tcactagggg 4741 ggcattcctc ttgaggaatg gaaagaaact ggttccgtct tgggcttctg tgaaggagga 4801 tctggtggct tatggtggtt cctggaaact agacgggaga tgggatggtg aggaggaagt 4861 ccaactcatc gctgctgtgc ctggaaaatc tgttgtcaac gttcaaacaa aaccaagctt 4921 gttcaaagtg aaaaatggtg gtgagattgg agcagttgct ctagactacc ccagtggaac 4981 ctcaggctcc cccattgtga accgaaatgg tgaagtggty gggctctatg gcaatggaat 5041 tctggtgggt gataactcct ttgtgtctgc catctcacaa actgaattga aggaagaatc 5101 caaagaagaa ctgcaagaaa taccaactat gctgaaaaaa ggaatgacca ccatccttga 5161 cttccaccct ggggcgggga aaacccgtag gttcctgcct caaatattgg cggagtgtgc 5221 cagaaggcgt ttgcgcactc tggtattagc acccaccagg gttgttttgt cagagatgaa 5281 agaagctttt caggggttgg atgtgaaatt ccacacacaa gctttctcag cccatgggag 5341 tgggaaggag gtcattgacg caatgtgcca tgcaaccctt acatatagaa tgctggaacc 5401 aacaagggta gtcaactggg aggtcattat tatggatgag gygcactttc tggatcctgc 5461 tagcatagca gcgagaggct gggcggctca tagagcaaga gcaartgaga gcgccaccat 5521 acttatgacc gccaccccac caggcaccag tgacgaattc cctcactcca atggtgagat 5581 tgaggacgtc cagactgaca tccccagcga gccatggacc acaggacatg aatggatctt 5641 ggcggacaag cgcccaactg catggttcct tccatcgatc agagcagcaa atgtcatggc 5701 agcctcgctg cggaaagcgg graaaaatgt ggtggtactg aataggaaaa cctttgaaaa 5761 ggagtacccc accattaagc agaagaaacc ggatttcatc cttgccaccg atatcgctga 5821 gatgggagca aacttgtgtg tggagagagt cttggactgc agaactgcct acaagcctgt 5881 cctggttgat gaagggaaga aggtggctat caaagggccg ctacgaatct cagcgtcatc 5941 ggccgctcag aggagaggac gcattggacg caatcccaac agagatggtg actcttacta 6001 ctactcagaa cctaccagtg aggacaatgc acaccatgtg tgctggctgg aggcttccat 6061 gctcctggat aacatggagg ttwgaggggg gatggttgct ccactttatg gcattgaggg 6121 aacaaagact cccgtctctc caggagaaat gaggctaaga gatgatcaga gaagggtctt 6181 tagagagttg gtgcgagggt gtgatttgcc agtgtggttg gcatggcaag tggcaaaagc 6241 cggcctgaag accaatgacc gcaaatggtg ttttgagggt cccgaagagc atgaaatact 6301 caatgacaat ggtgaaacag taaagtgtag atctccgggc ggagcaaaaa gagcattgag 6361 acctagatgg tgtgacgaga gagtttcctc agaccagagt gccttggctg acttcattaa 6421 gtttgcagaa ggtagaagag gggctgctga gatgcttgtg atcctcacgg agttgcccga 6481 cttcctggca aagaagggtg gggaagccat ggataccatc agtgtgttcc tacattctga 6541 agagggttca agagcgtaca gaaatgccct gtcaatgatg ccagaagcca tgaccattgt 6601 catgctcttc ctgcttgccg gactcttgac ctcaggagcg gtgattttct tcatgtcgcc 6661 aaaaggcatg agtagaatgt caatggcaat gggtaccatg gctggcagtg gatatctcat 6721 gtttctgggg ggagtaaaac caacccacat ctcttacgtc atgttaatat tctttgtcct 6781 catggtcgtc ataattcccg aaccaggaca gcagagatca atccaggata accaagttgc 6841 ctacctcata attgggatct tgacattgtt atcagttgtg gcagctaatg aactagggat 6901 gctggagaag accaaggaag atttttttgg aaagagagac atcamaacac cragtggggc 6961 aatcccatgg agttggcctg acctggatct gaaacctggg gcggcctgga cagtctatgt 7021 gggaatcgtg acgatgttgt ctcccatgtt acaccattgg ataaaagttg agtatggcaa 7081 tttgtcacta tcgggaatag cccaatctgc ctcagttctt tcatttatgg acaaaggaat 7141 tcccttcatg aaaatgaata tatctgtggt catacttttg gtcagtggct ggaattcaat 7201 cacagtgatc cctcttttgt gcggcattgg tggagccatg ctgcactgga cgctcatact 7261 tcctgggatt aaagcccagc aatcaaagct ggctcaaaaa agagtttttc atggagtggc 7321 aaaaaatcca gttgttgatg gcaatccaac tgctgacatt gaggaagccc cagaaatgcc 7381 agctttatat gaaaagaagc tggctcttta cctccttctg gccctaagcc tcatgtcagt 7441 tgccatgtgc agaacccctt tttccttagc ggaaggaata gtactgtcat ctgccgccct 7501 tggaccwctc attgagggga acactagtct gttgtggaat ggcccaatgg ccgtttccat 7561 gactggagtc atgcgtggca actactacgc ttttgtggga gtcatgtaca atctctggaa 7621 aatgaaaaca gggcgtagag ggagagcaag tggaaaaaca ttgggtgagg tctggaagcg 7681 tgaacttaac ttgctagaca aacaacaatt tgaaatgtac aaaagaacag acatcattga 7741 ggtggaccga gacatggcac gacgacactt ggcagaggga aaggtggaca cgggagtggc 7801 cgtgtcgaga gggactgcaa agctgagatg gttccacgag cgtggctatg tgaagctaga 7861 aggaagggtc accgatcttg ggtgtggacg tggaggctgg tgctactatg cagcagctca 7921 aaaagaagtt agtggtgtga aggggtatac ccttggcaga gatggccatg agaaacctat 7981 gaatgtccaa agcttgggat ggaatattgt gacttttaag gacaagactg atattcaccg 8041 actggagcca ctcaagtgtg aaactctcct ctgtgacatc ggagaatcgt ctccatcctc 8101 cgcaactgag ggtgagagga ccttaagagt tctggacaca gttgaaaagt ggttggcttg 8161 tggagtggat aacttttgca tcaaagttct ggcaccatac atgcccgatg tgatagagaa 8221 actggagctt cttcaaagaa gattcggtgg aaccgtcatc aggaatcctc tgtccagaaa 8281 ttctactcat gaaatgtact acgtttcagg agcaagaagt aacatcacat tcacagtcaa 8341 ccagacatca cgcctgctga tgcgaaggat gaggcggccc acaggcaaag ttaccttgga 8401 agctgatgtc attcttccga taggcacgcg cagtgtggaa actgataaag gcccattgga 8461 taaggatgct attgaggaaa gagttgagag aatcaagaat gaatatgcca ctacatggtt 8521 ctatgacaat gacaacccgt atagaacgtg gcattattgt ggctcctatg tgaccaaaac 8581 gtcaggaagt gcagccagca tgataaatgg agtcatcaaa atcttgactt ttccatggga 8641 caggatagaa gaagtcacaa gaatggcaat gactgacacc acaccttttg gacaacaaag 8701 agttttcaag gagaaagtag acacaagagc aaaagaccct cctgctggaa caaggaagat 8761 catgaaggtg gtgaatagat ggttgtttcg gcatctgtcc agggagaaga accccaggtt 8821 gtgcaccaaa gaagaattca ttgccaaagt acggagccat gcagcagtgg gggcttttct 8881 agaggaacaa gagcagtgga aaacggccaa tgaggcagtc cttgatccaa agttttggga 8941 aatggtcgat gcagaacgca aacttcatca gcaggggcga tgccaatcct gtgtgtacaa 9001 catgatggga aagagggaaa agaaactctc tgaatttgga aaggccaaag ggagccgtgc 9061 tatctggtac atgtggcttg gggcacggtt ccttgagttt gargctcttg ggtttttaaa 9121 tgaagatcac tgggcctccc gggagaactc ggggggagga gttgagggca taggactcca 9181 gtacttgggc tatgttatca gggacttgtc aaccaaagaa ggtggagggt tttatgcgga 9241 tgacacggca gggtgggaca cacgcatcac agaagctgac ctggatgacg agcaagagat 9301 catgagttac atgagccctg aacaaaggaa gctggcctgg gctataatgg aaatgacata 9361 caagaacaaa gtggttaagg tgctgaggcc agccccagga ggcaaggcct tcatggacat 9421 catcagccgg agagaccaaa gggggtcarr acaagtkgtg acatacgccc tcaacaccat 9481 aaccaatcta aaagtccagc tcataagaat ggctgaagct gaaatggtga tcaaccatca 9541 gcatgtgcag gagtgtggtg aaaatgtctt agagcggctt gaaacttggc ttgctgaaaa 9601 cggatgtgac agattgagcc gaatggctgt gagtggggat gattgtgttg tgagaccggt 9661 ggatgacaga tttggcctgg ccctttccca tcttaatgca atgtccaaag ttaggaagga 9721 catttcagaa tggcaaccct ccaaaggatg gacagattgg gaaaatgttc ctttctgctc 9781 tcaccacttc catgaactgg tgttgaaaga tgggaggaag atagtggtgc cttgcagaga 9841 ycaagatgaa ctgataggga gagggagagt gtccccagga aatggctgga tgatcaagga 9901 aacagcctgc ctcagcaaag cttacgcaaa catgtggtca ctgatgtact ttcacaagag 9961 ggacatgagg ctactttcat tcgctgtctc ctccgctgtt ccaacggcct gggtgcccag 10021 tggaaggaca acgtggtctg tccacggaag aggggagtgg atgacaactg aggacatgct 10081 agatgtctgg aacagggtgt gggtgttgaa taacccgcac atgacggaca aaacaaccat 10141 caaggagtgg agagatgctc cctacctcac aaagagacag gataagcttt gcgggtcact 10201 gataggaatg acaaacaggg ccacatgggc atctcacatc caccttgtga tccaccggat 10261 cagaactcta ataggtcaag agaagttcac agactacctc accgtcatgg acaggtattc 10321 tgttgatgcc gaccttcagc caggagagct tatctgagac attacaacat ggaaaaccgg 10381 gataaaaact acgggtggag aaccggactc cccacttgaa amatgtaaat arraaaccgg 10441 gatmaaaacw acgggyggag aaccggactc cccactgaat aggctataaa cgtcagccca 10501 ggatccaaaa atttgaatgg gtcttgccac cgctaagctg tgaggcggtg cgggctggga 10561 cagccgtttc ccgggcaacg acatgcctgg tttctgggac ttcccaaccc agagtaaaac 10621 gaaggagcct ccgccaccac cctcccacgg ggtgttggaa agatggggtc tagaggttag 10681 aggagaccct ccagggaaat tagtgggacc atattgacgc cagggaaaga ccggagtggt 10741 tctctgcttt tcctccaggg gtctgcgagc acagtttgct ctagaagaag cagacctttg 10801 gatgacaaaa cacaaaacca ct
niman Posted June 18, 2016 Author Report Posted June 18, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX010995.1|Yellow fever virus isolate CIC2, complete genome1841718417100%0.0100%KX010995.1Select seq gb|KX027336.1|Yellow fever virus isolate CIC4, complete genome1833018330100%0.099%KX027336.1Select seq gb|KX010996.1|Yellow fever virus isolate CIC3, complete genome1830718307100%0.099%KX010996.1Select seq gb|KX010994.1|Yellow fever virus isolate CIC1, complete genome1800618006100%0.099%KX010994.1Select seq gb|AY968064.1|Yellow fever virus strain Angola71, complete genome1765017650100%0.098%AY968064.1Select seq gb|DQ235229.1|Yellow fever virus strain Couma, complete genome1133911339100%0.085%DQ235229.1Select seq gb|JN620362.1|Yellow fever virus strain Uganda 2010, complete genome1129511295100%0.084%JN620362.1Select seq gb|AY968065.1|Yellow fever virus strain Uganda48a, complete genome1129311293100%0.084%AY968065.1Select seq gb|JF912179.1|Yellow fever virus strain BeAR378600, complete genome87568756100%0.079%JF912179.1Select seq gb|JF912185.1|Yellow fever virus strain BeAR513008, complete genome87538753100%0.079%JF912185.1Select seq gb|AY603338.1|Yellow fever virus strain Ivory Coast 1999, complete genome87368736100%0.079%AY603338.1Select seq gb|JF912186.1|Yellow fever virus strain BeH526722, complete genome87338733100%0.079%JF912186.1Select seq gb|JF912184.1|Yellow fever virus strain BeH463676, complete genome87188718100%0.079%JF912184.1Select seq gb|AY572535.1|Yellow fever virus strain Gambia 2001, complete genome87188718100%0.079%AY572535.1Select seq gb|JX898873.1|Yellow fever virus isolate ArD149214 from Senegal, complete genome87118711100%0.079%JX898873.1Select seq gb|JF912183.1|Yellow fever virus strain BeH423602, complete genome87098709100%0.079%JF912183.1Select seq gb|JX898874.1|Yellow fever virus isolate ArD149194 from Senegal, complete genome87078707100%0.079%JX898874.1Select seq gb|JX898868.1|Yellow fever virus isolate HD117294 from Senegal, complete genome87048704100%0.079%JX898868.1Select seq gb|JX898875.1|Yellow fever virus isolate ArD149815 from Senegal, complete genome87028702100%0.079%JX898875.1Select seq gb|KM388817.1|Yellow fever virus strain 2A polyprotein gene, complete cds86898689100%0.079%KM388817.1Select seq gb|KM388816.1|Yellow fever virus strain 10A polyprotein gene, complete cds86808680100%0.079%KM388816.1Select seq gb|JF912187.1|Yellow fever virus strain BeH622205, complete genome86798679100%0.079%JF912187.1Select seq gb|JX898870.1|Yellow fever virus isolate ArD121040 from Senegal, complete genome86758675100%0.079%JX898870.1Select seq gb|JF912188.1|Yellow fever virus strain BeH622493, complete genome86758675100%0.079%JF912188.1Select seq gb|JX898880.1|Yellow fever virus isolate ArD181564 from Senegal, complete genome86708670100%0.079%JX898880.1Select seq gb|JX898877.1|Yellow fever virus isolate ArD181464 from Senegal, complete genome86688668100%0.079%JX898877.1Select seq gb|JX898878.1|Yellow fever virus isolate ArD181250 from Senegal, complete genome86668666100%0.079%JX898878.1Select seq gb|JF912180.1|Yellow fever virus strain BeH394880, complete genome86628662100%0.079%JF912180.1Select seq gb|JX898876.1|Yellow fever virus isolate ArD156468 from Senegal, complete genome86448644100%0.079%JX898876.1Select seq gb|JF912182.1|Yellow fever virus strain BeH422973, complete genome86418641100%0.079%JF912182.1Select seq gb|JF912189.1|Yellow fever virus strain BeAR646536, complete genome86398639100%0.079%JF912189.1Select seq gb|HM582851.1|Yellow fever virus strain TVP11767 polyprotein gene, complete cds86378637100%0.079%HM582851.1Select seq gb|JF912190.1|Yellow fever virus strain BeH655417, complete genome86268626100%0.079%JF912190.1Select seq gb|JX898869.1|Yellow fever virus isolate DakArAmt7 from Cote d'Ivoire, complete genome86158615100%0.079%JX898869.1Select seq gb|KM388815.1|Yellow fever virus strain 9A polyprotein gene, complete cds86088608100%0.079%KM388815.1Select seq gb|KM388814.1|Yellow fever virus strain 6A polyprotein gene, complete cds86088608100%0.079%KM388814.1Select seq gb|AY640589.1|Yellow fever virus strain ASIBI, complete genome86088608100%0.079%AY640589.1Select seq gb|KF769016.1|Yellow fever virus strain Asibi, complete genome86038603100%0.079%KF769016.1Select seq gb|KM388818.1|Yellow fever virus strain 8A polyprotein gene, complete cds85678567100%0.079%KM388818.1Select seq gb|KF907504.1|Yellow fever virus strain 88/1999, complete genome85478547100%0.079%KF907504.1Select seq gb|U21056.1|YFU21056Yellow fever virus French viscerotropic strain, complete genome85458545100%0.078%U21056.1Select seq gb|JX898872.1|Yellow fever virus isolate ArD114972 from Senegal, complete genome85228522100%0.078%JX898872.1Select seq gb|JX898871.1|Yellow fever virus isolate ArD114896 from Senegal, complete genome85138513100%0.078%JX898871.1Select seq gb|DQ100292.1|Yellow fever virus strain 17DD-Brazil, complete genome85048504100%0.078%DQ100292.1Select seq gb|U21055.1|YFU21055Yellow fever virus French neurotropic strain, complete genome85008500100%0.078%U21055.1Select seq gb|GQ379162.1|Yellow fever virus strain case #1, complete genome84868486100%0.078%GQ379162.1Select seq gb|U17066.1|YFU17066Yellow fever virus vaccine strain 17DD, complete genome84868486100%0.078%U17066.1Select seq emb|X03700.1|Yellow fever virus complete genome, 17D vaccine strain84828482100%0.078%X03700.1Select seq gb|KF769015.1|Yellow fever virus strain 17D-204, complete genome84778477100%0.078%KF769015.1Select seq gb|JN811143.1|Yellow fever virus 17D YF-VAX Vero adapted Series C P11, complete genome84778477100%0.078%JN811143.1Select seq gb|JX503529.1|Yellow fever virus strain YF/Vaccine/USA/Sanofi-Pasteur-17D-204/UF795AA/YFVax, complete genome84778477100%0.078%JX503529.1Select seq gb|JN628279.1|Yellow fever virus strain 17D RKI, complete genome84778477100%0.078%JN628279.1Select seq gb|AF052444.1|AF052444Yellow fever virus clone HONG8 polyprotein gene, complete cds84778477100%0.078%AF052444.1Select seq gb|JX949181.1|Yellow fever virus strain 17D polyprotein gene, complete cds84738473100%0.078%JX949181.1Select seq gb|FJ654700.1|Yellow fever virus 17D/Tiantan, complete genome84738473100%0.078%FJ654700.1Select seq gb|DQ118157.1|Yellow fever virus isolate YF-AVD2791-93F/04 from Spain, complete genome84738473100%0.078%DQ118157.1Select seq emb|X15062.1|Yellow fever virus genomic RNA84738473100%0.078%X15062.1Select seq gb|AF052446.1|AF052446Yellow fever virus clone HONG10 polyprotein gene, complete cds84738473100%0.078%AF052446.1Select seq gb|AF052439.1|AF052439Yellow fever virus clone HONG3 polyprotein gene, complete cds84738473100%0.078%AF052439.1Select seq gb|AF052438.1|AF052438Yellow fever virus clone HONG2 polyprotein gene, complete cds84738473100%0.078%AF052438.1Select seq gb|AF052437.1|AF052437Yellow fever virus clone HONG1 polyprotein gene, complete cds84738473100%0.078%AF052437.1Select seq gb|U17067.1|YFU17067Yellow fever virus vaccine strain 17D-213, complete genome84738473100%0.078%U17067.1Select seq gb|GQ379163.1|Yellow fever virus strain case #2, complete genome84718471100%0.078%GQ379163.1Select seq gb|JN811141.1|Yellow fever virus 17D YF-VAX Vero adapted Series A P11, complete genome84688468100%0.078%JN811141.1Select seq gb|AF052445.1|AF052445Yellow fever virus clone HONG9 polyprotein gene, complete cds84688468100%0.078%AF052445.1Select seq gb|U54798.1|YFU54798Yellow fever virus strain 85-82H Ivory Coast, complete genome84668466100%0.078%U54798.1Select seq gb|JN811142.1|Yellow fever virus 17D YF-VAX Vero adapted Series B P11, complete genome84648464100%0.078%JN811142.1Select seq gb|AF094612.1|AF094612Yellow fever virus strain Trinidad 79A isolate 788379, complete genome83998399100%0.078%AF094612.1Select seq gb|JF912181.1|Yellow fever virus strain BeH413820, complete genome83768376100%0.078%JF912181.1Select seq gb|DQ322634.1|YFV replicon vector FMDV-2A-def, complete sequence8181829697%0.078%DQ322634.1Select seq gb|DQ322633.1|YFV replicon vector capsid-def, complete sequence8181829697%0.078%DQ322633.1Select seq gb|DQ322635.1|YFV replicon vector prME-def, complete sequence6506683781%0.078%DQ322635.1Select seq dbj|D14458.1|YFVCMENSYellow fever virus prM gene for precursor polyprotein, partial cds3146314634%0.080%D14458.1Select seq gb|AF052443.1|AF052443Yellow fever virus clone HONG7 polyprotein gene, partial cds2224222426%0.078%AF052443.1Select seq gb|GU951804.1|Yellow fever virus strain BeAn 131 polyprotein gene, partial cds2223222326%0.078%GU951804.1Select seq gb|AF052441.1|AF052441Yellow fever virus clone HONG5 polyprotein gene, partial cds2219221926%0.078%AF052441.1Select seq gb|AH005112.2|Yellow fever virus strain Y5 polyprotein and nonstructural protein NS2A mRNAs, partial cds2140250527%0.080%AH005112.2Select seq gb|AY960140.1|Yellow fever virus strain ArB28153 polyprotein gene, partial cds2127212717%0.086%AY960140.1Select seq gb|DQ322638.1|VEEV replicon vector YFV-C2, complete sequence2127212722%0.080%DQ322638.1Select seq gb|AF052440.1|AF052440Yellow fever virus clone HONG4 polyprotein gene, partial cds2122212222%0.080%AF052440.1Select seq gb|L06480.1|YFVCAPSIDMYellow fever virus capsid protein, M protein, and envelope protein mRNAs2122212222%0.080%L06480.1Select seq gb|DQ322642.1|VEEV replicon vector YFV-C3opt, complete sequence1936193622%0.078%DQ322642.1Select seq gb|DQ322640.1|VEEV replicon vector YFV-C3opt-NS2mut, complete sequence1936193622%0.078%DQ322640.1Select seq gb|U23578.1|YFU23578Yellow fever virus isolate SE7445/Uganda/1964/Human envelope protein (E) mRNA, partial cds1820182014%0.087%U23578.1Select seq gb|U23577.1|YFU23577Yellow fever virus isolate M-112/Sudan/1940/Human envelope protein (E) mRNA, partial cds1811181114%0.087%U23577.1Select seq gb|AY839636.1|Yellow fever virus strain ETH2777/Ethiopia61 envelope protein gene, partial cds1797179714%0.087%AY839636.1Select seq gb|DQ068260.1|Yellow fever virus strain SSUD03-01 envelope protein gene, partial cds1784178414%0.087%DQ068260.1Select seq gb|U23573.1|YFU23573Yellow fever virus isolate DaHB1504/C. African Republic/1985/Human envelope protein (E) mRNA, partial cds1784178414%0.087%U23573.1Select seq gb|DQ068264.1|Yellow fever virus strain SSUD03-05 envelope protein gene, partial cds1779177914%0.087%DQ068264.1Select seq gb|DQ068263.1|Yellow fever virus strain SSUD03-04 envelope protein gene, partial cds1779177914%0.087%DQ068263.1Select seq gb|DQ068262.1|Yellow fever virus strain SSUD03-03 envelope protein gene, partial cds1779177914%0.087%DQ068262.1Select seq gb|AY839634.1|Yellow fever virus strain HB1782/CAR86 envelope protein gene, partial cds1779177914%0.087%AY839634.1Select seq gb|U23569.1|YFU23569Yellow fever virus isolate 7914/Kenya/1993/Human envelope protein (E) mRNA, partial cds1766176614%0.086%U23569.1Select seq gb|U23575.1|YFU23575Yellow fever virus isolate KE93-477/Kenya/1993/Mosquito envelope protein (E) mRNA, partial cds1761176114%0.086%U23575.1Select seq gb|U23571.1|YFU23571Yellow fever virus isolate ArB8883/C. African Republic/1977/Human envelope protein (E) mRNA, partial cds1761176114%0.086%U23571.1Select seq gb|U23576.1|YFU23576Yellow fever virus isolate Kouma/Ethiopia/1961/Human envelope protein (E) mRNA, partial cds1755175514%0.086%U23576.1Select seq gb|AY960138.1|Yellow fever virus strain ArA 20628 polyprotein gene, partial cds1745174517%0.081%AY960138.1Select seq gb|AY960137.1|Yellow fever virus strain Ara29436 polyprotein gene, partial cds1703170317%0.081%AY960137.1Select seq gb|AY960139.1|Yellow fever virus strain Ara6734 polyprotein gene, partial cds1676167617%0.081%AY960139.1Select seq gb|DQ859058.1|Wesselsbron virus strain SAH-177 99871-2 polyprotein gene, complete cds1523203475%0.067%DQ859058.1Select seq gb|EU707555.1|Wesselsbron virus strain SAH177, complete genome1517202375%0.067%EU707555.1Select seq gb|GU073158.1|Yellow fever virus strain Senegal/Ko/ARDX/2000 envelope glycoprotein (E) gene, partial cds1514151414%0.082%GU073158.1Select seq gb|GU073145.1|Yellow fever virus strain Senegal/Ke/ArD149213/2000 envelope glycoprotein (E) gene, partial cds1514151414%0.082%GU073145.1Select seq gb|GU073144.1|Yellow fever virus strain Senegal/Ke/ArD149194/2000 envelope glycoprotein (E) gene, partial cds1514151414%0.082%GU073144.1Select seq gb|GU073136.1|Yellow fever virus strain Mali/Ba/HA872/1987 envelope glycoprotein (E) gene, partial cds1514151414%0.082%GU073136.1Select seq gb|GU073166.1|Yellow fever virus strain Senegal/Ko/HD117294/1995 envelope glycoprotein (E) gene, partial cds1510151014%0.082%GU073166.1Select seq gb|GU073143.1|Yellow fever virus strain Senegal/Ke/ArD149179/2000 envelope glycoprotein (E) gene, partial cds1510151014%0.082%GU073143.1Select seq gb|GU073152.1|Yellow fever virus strain Senegal/Ke/ArD156468/2001 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073152.1Select seq gb|GU073141.1|Yellow fever virus strain Senegal/Ke/AnD26923/1978 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073141.1Select seq gb|GU073137.1|Yellow fever virus strain Mali/Sa/ArA20267/1987 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073137.1Select seq gb|GU073156.1|Yellow fever virus strain Senegal/Ke/ArD25112/1977 envelope glycoprotein (E) gene, partial cds1496149614%0.082%GU073156.1Select seq gb|GU073153.1|Yellow fever virus strain Senegal/Ke/ArD156583/2001 envelope glycoprotein (E) gene, partial cds1496149614%0.082%GU073153.1Select seq gb|GU073135.1|Yellow fever virus strain Gambia/MK/ArD27797/1979 envelope glycoprotein (E) gene, partial cds1492149214%0.082%GU073135.1Select seq gb|GU073163.1|Yellow fever virus strain Senegal/Ko/ArD114987/1995 envelope glycoprotein (E) gene, partial cds1483148314%0.082%GU073163.1Select seq gb|AY502949.1|Yellow fever virus strain Guinea/2000/human envelope protein (env) gene, partial cds1481148114%0.082%AY502949.1Select seq gb|GU073159.1|Yellow fever virus strain Senegal/Ko/ArD114891/1995 envelope glycoprotein (E) gene, partial cds1480148014%0.082%GU073159.1Select seq gb|GU073149.1|Yellow fever virus strain Senegal/Ke/ArD149815/2000 envelope glycoprotein (E) gene, partial cds1480148014%0.082%GU073149.1Select seq gb|GU073140.1|Yellow fever virus strain Senegal/Ka/HD122030/1996 envelope glycoprotein (E) gene, partial cds1480148014%0.082%GU073140.1Select seq gb|GU073161.1|Yellow fever virus strain Senegal/Ko/ArD114970/1995 envelope glycoprotein (E) gene, partial cds1478147814%0.082%GU073161.1Select seq gb|GU073148.1|Yellow fever virus strain Senegal/Ke/ArD149791/2000 envelope glycoprotein (E) gene, partial cds1478147814%0.082%GU073148.1Select seq gb|GU073142.1|Yellow fever virus strain Senegal/Ke/ArD121040/1996 envelope glycoprotein (E) gene, partial cds1472147214%0.082%GU073142.1Select seq gb|GU073146.1|Yellow fever virus strain Senegal/Ke/ArD149214/2000 envelope glycoprotein (E) gene, partial cds1469146914%0.082%GU073146.1Select seq gb|AY495561.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1462146215%0.081%AY495561.1Select seq gb|GU073164.1|Yellow fever virus strain Senegal/Ko/ArD114988/1995 envelope glycoprotein (E) gene, partial cds1460146014%0.082%GU073164.1Select seq gb|GU073131.1|Yellow fever virus strain Cameroon/HD78359/1990 envelope glycoprotein (E) gene, partial cds1460146014%0.081%GU073131.1Select seq gb|AY359908.2|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1460146015%0.081%AY359908.2Select seq gb|GU073157.1|Yellow fever virus strain Senegal/Ke/ArD99740/1993 envelope glycoprotein (E) gene, partial cds1458145814%0.082%GU073157.1Select seq gb|GU073147.1|Yellow fever virus strain Senegal/Ke/ArD149215/2000 envelope glycoprotein (E) gene, partial cds1454145414%0.082%GU073147.1Select seq gb|L02865.1|YFVENVAYellow fever virus wild-type envelope protein (env)1454145414%0.082%L02865.1Select seq gb|GU073160.1|Yellow fever virus strain Senegal/Ko/ArD114896/1995 envelope glycoprotein (E) gene, partial cds1452145214%0.082%GU073160.1Select seq gb|AY495571.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1452145215%0.081%AY495571.1Select seq gb|AY495567.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1452145215%0.081%AY495567.1Select seq gb|GU073130.1|Yellow fever virus strain CAR/Bo/ArB5656/1974 envelope glycoprotein (E) gene, partial cds1451145114%0.081%GU073130.1Select seq gb|AY359909.1|Yellow fever virus isolate DNA-YF-3 protein E gene, partial cds1451145115%0.081%AY359909.1Select seq gb|GU073139.1|Yellow fever virus strain Senegal/Ka/ArD122522/1996 envelope glycoprotein (E) gene, partial cds1449144914%0.082%GU073139.1Select seq gb|AY359907.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1449144914%0.081%AY359907.1Select seq gb|GU073133.1|Yellow fever virus strain CotedIvoire/SS/ARM154/1995 envelope glycoprotein (E) gene, partial cds1445144514%0.082%GU073133.1Select seq gb|AY495558.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1445144515%0.081%AY495558.1Select seq gb|AY839635.1|Yellow fever virus strain ArD76320/Senegal90 envelope protein gene, partial cds1445144514%0.082%AY839635.1Select seq gb|U23574.1|YFU23574Yellow fever virus isolate Dar1279/Senegal/1965/Human envelope protein (E) mRNA, partial cds1445144514%0.082%U23574.1Select seq gb|L02866.1|YFVENVBYellow fever virus envelope protein (env)1445144514%0.082%L02866.1Select seq gb|GU073150.1|Yellow fever virus strain Senegal/Ke/ArD149887/2000 envelope glycoprotein (E) gene, partial cds1443144314%0.082%GU073150.1Select seq gb|GU073162.1|Yellow fever virus strain Senegal/Ko/ArD114972/1995 envelope glycoprotein (E) gene, partial cds1442144214%0.082%GU073162.1Select seq gb|AY495569.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1442144214%0.081%AY495569.1Select seq gb|AY495562.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1442144215%0.081%AY495562.1Select seq gb|AY495566.1|Yellow fever virus isolate DNA-YF-7 protein E gene, partial cds1440144015%0.081%AY495566.1Select seq gb|AY495559.1|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1440144014%0.081%AY495559.1Select seq gb|GU073132.1|Yellow fever virus strain CotedIvoire/De/ArA523/1996 envelope glycoprotein (E) gene, partial cds1436143614%0.082%GU073132.1Select seq gb|JN226796.1|Wesselsbron virus from South Africa, complete genome1422185475%0.066%JN226796.1Select seq gb|GU073165.1|Yellow fever virus strain Senegal/Ko/ArD114989/1995 envelope glycoprotein (E) gene, partial cds1418141814%0.082%GU073165.1Select seq gb|U23580.1|YFU23580Yellow fever virus isolate V-528A/Colombia/1979/Mosquito envelope protein (E) mRNA, partial cds1418141814%0.081%U23580.1Select seq gb|AY495573.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1416141614%0.081%AY495573.1Select seq gb|AY495570.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1415141514%0.081%AY495570.1Select seq gb|AY495568.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1411141114%0.081%AY495568.1Select seq gb|AY495572.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1409140914%0.081%AY495572.1Select seq gb|U23570.1|YFU23570Yellow fever virus isolate AR350397/Brazil/1979/Mosquito envelope protein (E) mRNA, partial cds1409140914%0.081%U23570.1Select seq gb|U23568.1|YFU23568Yellow fever virus isolate 788379/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1406140614%0.081%U23568.1Select seq gb|GU073134.1|Yellow fever virus strain CotedIvoire/To/DakArAmt7/1973 envelope glycoprotein (E) gene, partial cds1402140213%0.082%GU073134.1Select seq gb|U23579.1|YFU23579Yellow fever virus isolate T790882/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1400140014%0.081%U23579.1Select seq gb|AY632543.1|Sepik virus polyprotein gene, complete cds1397178775%0.066%AY632543.1Select seq gb|DQ859063.1|Sepik virus strain 7148 polyprotein gene, complete cds1393178475%0.066%DQ859063.1Select seq gb|AY495574.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1393139314%0.081%AY495574.1Select seq gb|U23572.1|YFU23572Yellow fever virus isolate BA-55/Nigeria/1986/Human envelope protein (E) mRNA, partial cds1391139114%0.081%U23572.1Select seq gb|GU073151.1|Yellow fever virus strain Senegal/Ke/ArD156029/2001 envelope glycoprotein (E) gene, partial cds1382138213%0.082%GU073151.1Select seq gb|DQ837642.1|Sepik virus strain MK7148, complete genome1382177375%0.066%DQ837642.1Select seq gb|U23567.1|YFU23567Yellow fever virus isolate 56205/Nigeria/1991/Human envelope protein (E) mRNA, partial cds1382138214%0.081%U23567.1Select seq gb|U23566.1|YFU23566Yellow fever virus isolate 1914-81/Ecuador/1981/Human envelope protein (E) mRNA, partial cds1373137314%0.081%U23566.1Select seq gb|U23565.1|YFU23565Yellow fever virus isolate 1362/Peru/1977/Human envelope protein (E) mRNA, partial cds1373137314%0.081%U23565.1Select seq gb|GU073138.1|Yellow fever virus strain Mauritania/Ro/HD47471/1987 envelope glycoprotein (E) gene, partial cds1319131913%0.081%GU073138.1Select seq gb|U52422.1|YFU52422Yellow fever virus Uga48 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1279127911%0.084%U52422.1Select seq gb|U52392.1|YFU52392Yellow fever virus Car77(883) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1267126711%0.083%U52392.1Select seq gb|DQ859067.1|Potiskum virus strain IBAN 10069 polyprotein gene, complete cds1191151463%0.066%DQ859067.1Select seq gb|AF369669.1|AF369669Yellow fever virus strain 14 FA polyprotein mRNA, partial cds115511556%0.098%AF369669.1Select seq gb|U52398.1|YFU52398Yellow fever virus Ecuador79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1144114411%0.081%U52398.1Select seq gb|U52416.1|YFU52416Yellow fever virus Trinidad54 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1141114111%0.081%U52416.1Select seq gb|DQ859062.1|Saboya virus strain Dak AR D4600 polyprotein gene, complete cds1126121067%0.065%DQ859062.1Select seq gb|U52404.1|YFU52404Yellow fever virus Panama74 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1122112211%0.081%U52404.1Select seq gb|U52389.1|YFU52389Yellow fever virus Brazil35 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1117111711%0.081%U52389.1Select seq gb|U52403.1|YFU52403Yellow fever virus Nigeria46 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1108110811%0.080%U52403.1Select seq gb|U52410.1|YFU52410Yellow fever virus Peru95(153) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1081108111%0.080%U52410.1Select seq gb|U52419.1|YFU52419Yellow fever virus Trinidad79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1077107711%0.080%U52419.1Select seq gb|U52409.1|YFU52409Yellow fever virus Peru95(149) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1068106811%0.080%U52409.1Select seq gb|U52413.1|YFU52413Yellow fever virus Senegal65 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1059105911%0.080%U52413.1Select seq gb|AF162449.1|AF162449Yellow fever virus isolate PER 1 envelope protein gene, partial cds9179179%0.080%AF162449.1Select seq gb|AF312554.1|AF312554Yellow fever virus glycoprotein E gene, partial cds9139139%0.080%AF312554.1Select seq gb|AF162451.1|AF162451Yellow fever virus isolate PER 3 envelope protein gene, partial cds9139139%0.080%AF162451.1Select seq gb|AF162452.1|AF162452Yellow fever virus isolate PER 4 envelope protein gene, partial cds9089089%0.080%AF162452.1Select seq gb|AF162450.1|AF162450Yellow fever virus isolate PER 2 envelope protein gene, partial cds9049049%0.080%AF162450.1Select seq gb|AF013417.1|AF013417Yellow fever virus strain TN-96 NS5 protein (NS5) gene, partial cds87587510%0.079%AF013417.1Select seq gb|U52424.1|YFU52424Yellow fever virus Uga48 non-structural protein 4A mRNA, partial cds8078077%0.084%U52424.1Select seq gb|AF369673.1|AF369673Yellow fever virus strain HB 1504 polyprotein mRNA, partial cds7807806%0.086%AF369673.1Select seq gb|AF369697.1|AF369697Yellow fever virus strain LSF 4 polyprotein mRNA, partial cds7677676%0.085%AF369697.1Select seq gb|AF369692.1|AF369692Yellow fever virus strain M 90-5 polyprotein mRNA, partial cds7627626%0.085%AF369692.1Select seq gb|AF369696.1|AF369696Yellow fever virus strain Z 19039 polyprotein mRNA, partial cds7587586%0.085%AF369696.1Select seq gb|AF369695.1|AF369695Yellow fever virus strain SE 7445 polyprotein mRNA, partial cds7587586%0.085%AF369695.1Select seq gb|AF369676.1|AF369676Yellow fever virus strain BC 7914 polyprotein mRNA, partial cds7537536%0.085%AF369676.1Select seq gb|DQ859057.1|Bouboui virus strain DAK AR B490 polyprotein gene, complete cds749154752%0.067%DQ859057.1Select seq gb|AY839631.1|Yellow fever virus strain HB1782/CAR86 polyprotein gene, partial cds7497496%0.085%AY839631.1Select seq gb|AF369694.1|AF369694Yellow fever virus strain A 709-4-A2 polyprotein mRNA, partial cds7447446%0.085%AF369694.1Select seq gb|AF369675.1|AF369675Yellow fever virus strain Couma polyprotein mRNA, partial cds7447446%0.085%AF369675.1Select seq gb|JX012100.1|Yellow fever virus isolate Ethiopia1966a polyprotein gene, partial cds7427426%0.085%JX012100.1Select seq gb|DQ859066.1|Jugra virus strain P-9-314 polyprotein gene, complete cds740131753%0.066%DQ859066.1Select seq gb|AF369674.1|AF369674Yellow fever virus strain Serie 227 polyprotein mRNA, partial cds7407406%0.084%AF369674.1Select seq gb|AF369672.1|AF369672Yellow fever virus strain ArB 17239 polyprotein mRNA, partial cds7407406%0.084%AF369672.1Select seq gb|JX012103.1|Yellow fever virus isolate Ethiopia1966d polyprotein gene, partial cds7387386%0.085%JX012103.1Select seq gb|JX012097.1|Yellow fever virus isolate Sudan2003 polyprotein gene, partial cds7357356%0.085%JX012097.1Select seq gb|U52394.1|YFU52394Yellow fever virus Car77(883) non-structural protein 4A mRNA, partial cds7357357%0.081%U52394.1Select seq gb|AY839633.1|Yellow fever virus strain ETH2777/Ethiopia61 polyprotein gene, partial cds7287286%0.084%AY839633.1Select seq gb|JX012099.1|Yellow fever virus isolate Ethiopia1961d polyprotein gene, partial cds7207206%0.085%JX012099.1Select seq gb|U52397.1|YFU52397Yellow fever virus Car77(900) non-structural protein 4A mRNA, partial cds7177177%0.082%U52397.1Select seq gb|JX012098.1|Yellow fever virus isolate Ethiopia1961c polyprotein gene, partial cds7157156%0.085%JX012098.1Select seq gb|AY540464.1|Yellow fever virus strain BeAr513008 polyprotein gene, partial cds7137136%0.084%AY540464.1Select seq gb|AY540477.1|Yellow fever virus strain 1345 polyprotein gene, partial cds7087086%0.083%AY540477.1Select seq gb|AY540467.1|Yellow fever virus strain BeAr513292 polyprotein gene, partial cds7087086%0.083%AY540467.1Select seq gb|AY540449.1|Yellow fever virus strain BeH203410 polyprotein gene, partial cds7087086%0.083%AY540449.1Select seq gb|AY540475.1|Yellow fever virus strain V528A polyprotein gene, partial cds7047046%0.083%AY540475.1Select seq gb|AY540473.1|Yellow fever virus strain "Tennessee" polyprotein gene, partial cds7047046%0.083%AY540473.1Select seq gb|AY540472.1|Yellow fever virus strain BeAr544276 polyprotein gene, partial cds7047046%0.083%AY540472.1Select seq gb|AY540466.1|Yellow fever virus strain BeAr513060 polyprotein gene, partial cds7047046%0.083%AY540466.1Select seq gb|AY540465.1|Yellow fever virus strain BeH512772 polyprotein gene, partial cds7047046%0.083%AY540465.1Select seq gb|AY540459.1|Yellow fever virus strain BeAr424083 polyprotein gene, partial cds7047046%0.083%AY540459.1Select seq gb|AY540455.1|Yellow fever virus strain BeH385780 polyprotein gene, partial cds7047046%0.083%AY540455.1Select seq gb|AY540452.1|Yellow fever virus strain BeAr233436 polyprotein gene, partial cds7047046%0.083%AY540452.1Select seq gb|AY540476.1|Yellow fever virus strain INS347613 polyprotein gene, partial cds6996996%0.083%AY540476.1Select seq gb|AY540470.1|Yellow fever virus strain BeAr527547 polyprotein gene, partial cds6996996%0.083%AY540470.1Select seq gb|AY540447.1|Yellow fever virus strain BeAr142658 polyprotein gene, partial cds6996996%0.083%AY540447.1Select seq gb|AY540436.1|Yellow fever virus strain BeAr628124 polyprotein gene, partial cds6956956%0.083%AY540436.1Select seq gb|DQ872411.1|Yellow fever virus strain GML902621 polyprotein gene, partial cds6956956%0.083%DQ872411.1Select seq gb|AY540481.1|Yellow fever virus strain CAREC797984 polyprotein gene, partial cds6956956%0.083%AY540481.1Select seq gb|AY540463.1|Yellow fever virus strain BeAr512943 polyprotein gene, partial cds6956956%0.083%AY540463.1Select seq gb|AY540462.1|Yellow fever virus strain BeAn510268 polyprotein gene, partial cds6956956%0.083%AY540462.1Select seq gb|AY540454.1|Yellow fever virus strain BeAr350397 polyprotein gene, partial cds6956956%0.083%AY540454.1Select seq gb|AY540453.1|Yellow fever virus strain BeH233393 polyprotein gene, partial cds6956956%0.083%AY540453.1Select seq gb|AY540450.1|Yellow fever virus strain BeAr233164 polyprotein gene, partial cds6956956%0.083%AY540450.1Select seq gb|AY540444.1|Yellow fever virus strain BeH107714 polyprotein gene, partial cds6956956%0.083%AY540444.1Select seq gb|AY540485.1|Yellow fever virus strain CAREC891957 polyprotein gene, partial cds6906906%0.083%AY540485.1Select seq gb|AY540484.1|Yellow fever virus strain CAREC891954 polyprotein gene, partial cds6906906%0.083%AY540484.1Select seq gb|AY540483.1|Yellow fever virus strain CAREC890692 polyprotein gene, partial cds6906906%0.083%AY540483.1Select seq gb|AY540482.1|Yellow fever virus strain CAREC889920 polyprotein gene, partial cds6906906%0.083%AY540482.1Select seq gb|AY540480.1|Yellow fever virus strain Jimenez polyprotein gene, partial cds6906906%0.083%AY540480.1Select seq gb|AY540460.1|Yellow fever virus strain BeAr511437 polyprotein gene, partial cds6906906%0.083%AY540460.1Select seq gb|AY540441.1|Yellow fever virus strain BeAn23536 polyprotein gene, partial cds6906906%0.083%AY540441.1Select seq gb|DQ859056.1|Banzi virus strain SAH 336 polyprotein gene, complete cds688145563%0.066%DQ859056.1Select seq gb|AY437135.1|Yellow fever virus polyprotein gene, partial cds6886886%0.083%AY437135.1Select seq gb|AY540479.1|Yellow fever virus strain 614819 polyprotein gene, partial cds6866866%0.083%AY540479.1Select seq gb|AY540468.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6866866%0.083%AY540468.1Select seq gb|AY540458.1|Yellow fever virus strain BeH425381 polyprotein gene, partial cds6866866%0.083%AY540458.1Select seq gb|AY540443.1|Yellow fever virus strain BeAr44824 polyprotein gene, partial cds6866866%0.083%AY540443.1Select seq gb|AY540442.1|Yellow fever virus strain BeAr46299 polyprotein gene, partial cds6866866%0.083%AY540442.1Select seq gb|AY540488.1|Yellow fever virus strain PHO42H polyprotein gene, partial cds6816816%0.083%AY540488.1Select seq gb|AY540487.1|Yellow fever virus strain P128MC polyprotein gene, partial cds6816816%0.083%AY540487.1Select seq gb|AY540486.1|Yellow fever virus strain CAREC9515207 polyprotein gene, partial cds6816816%0.083%AY540486.1Select seq gb|AY540461.1|Yellow fever virus strain BeH511843 polyprotein gene, partial cds6816816%0.083%AY540461.1Select seq gb|AY540438.1|Yellow fever virus strain BeAN131 polyprotein gene, partial cds6816816%0.083%AY540438.1Select seq gb|FJ875520.1|Yellow fever virus strain SPAn289568 polyprotein gene, partial cds6776776%0.082%FJ875520.1Select seq gb|FJ875518.1|Yellow fever virus strain SPAn288183 polyprotein gene, partial cds6776776%0.082%FJ875518.1Select seq gb|AY540469.1|Yellow fever virus strain BeAr527198 polyprotein gene, partial cds6776776%0.082%AY540469.1Select seq gb|AY540440.1|Yellow fever virus strain BeAr189 polyprotein gene, partial cds6776776%0.082%AY540440.1Select seq gb|AY540439.1|Yellow fever virus strain BeAr162 polyprotein gene, partial cds6776776%0.082%AY540439.1Select seq gb|HM582843.1|Yellow fever virus strain BeH613582 polyprotein gene, partial cds6736736%0.083%HM582843.1Select seq gb|L40951.1|FVVNS5PBanzi virus nonstructural protein 5 (NS5) gene, partial cds67367323%0.067%L40951.1Select seq gb|FJ875517.1|Yellow fever virus strain SPH258595 polyprotein gene, partial cds6726726%0.082%FJ875517.1Select seq gb|EU303239.1|Yellow fever virus note H203410 nonstructural protein 5 (NS5) gene, partial cds6726727%0.079%EU303239.1Select seq gb|AY540456.1|Yellow fever virus strain BeH379501 polyprotein gene, partial cds6726726%0.082%AY540456.1Select seq gb|AY540437.1|Yellow fever virus strain BeH111 polyprotein gene, partial cds6726726%0.082%AY540437.1Select seq gb|HM582848.1|Yellow fever virus strain BeAr631464 polyprotein gene, partial cds6686686%0.083%HM582848.1Select seq gb|HM582839.1|Yellow fever virus strain TVP11646 polyprotein gene, partial cds6666666%0.083%HM582839.1Select seq gb|HM582845.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6616616%0.082%HM582845.1Select seq gb|AY540451.1|Yellow fever virus strain BeAn232869 polyprotein gene, partial cds6596596%0.082%AY540451.1Select seq gb|AY540434.1|Yellow fever virus strain OBS8026 polyprotein gene, partial cds6596596%0.082%AY540434.1Select seq gb|AY540490.1|Yellow fever virus strain 35708 polyprotein gene, partial cds6546546%0.082%AY540490.1Select seq gb|AY540474.1|Yellow fever virus strain INS382060 polyprotein gene, partial cds6546546%0.082%AY540474.1Select seq gb|AY161928.1|Yellow fever virus strain 1368 polyprotein gene, partial cds6526526%0.082%AY161928.1Select seq gb|HQ123568.1|Yellow fever virus strain PH71191 polyprotein gene, partial cds6506506%0.082%HQ123568.1Select seq gb|AY540445.1|Yellow fever virus strain BeAn142028 polyprotein gene, partial cds6456456%8e-18081%AY540445.1Select seq gb|AF369683.1|AF369683Yellow fever virus strain H117505 polyprotein mRNA, partial cds6456456%8e-18081%AF369683.1Select seq gb|AY540457.1|Yellow fever virus strain BeH413820 polyprotein gene, partial cds6416416%9e-17981%AY540457.1Select seq gb|AF369685.1|AF369685Yellow fever virus strain 56205 polyprotein mRNA, partial cds6416416%9e-17981%AF369685.1Select seq gb|AF369678.1|AF369678Yellow fever virus strain T. Adeoye polyprotein mRNA, partial cds6416416%9e-17981%AF369678.1Select seq gb|AY690831.1|Yellow fever virus strain SPU 160/03/23 polyprotein gene, partial cds6396395%3e-17885%AY690831.1Select seq gb|AY161951.1|Yellow fever virus strain OBS7904 polyprotein gene, partial cds6376376%1e-17781%AY161951.1Select seq gb|AY540433.1|Yellow fever virus strain OBS7937 polyprotein gene, partial cds6366366%4e-17781%AY540433.1Select seq gb|AY540431.1|Yellow fever virus strain OBS7687 polyprotein gene, partial cds6366366%4e-17781%AY540431.1Select seq gb|AF369682.1|AF369682Yellow fever virus strain H117491 polyprotein mRNA, partial cds6366366%4e-17781%AF369682.1Select seq gb|AF369680.1|AF369680Yellow fever virus strain M. Adejumo polyprotein mRNA, partial cds6366366%4e-17781%AF369680.1Select seq gb|AY161941.1|Yellow fever virus strain OBS2250 polyprotein gene, partial cds6326326%5e-17681%AY161941.1Select seq gb|AY161938.1|Yellow fever virus strain Cepa#2 polyprotein gene, partial cds6326326%5e-17681%AY161938.1Select seq gb|AY540432.1|Yellow fever virus strain OBS7549 polyprotein gene, partial cds6326326%5e-17681%AY540432.1Select seq gb|AF369681.1|AF369681Yellow fever virus strain A. Adeoye polyprotein mRNA, partial cds6326326%5e-17681%AF369681.1Select seq gb|AF369679.1|AF369679Yellow fever virus strain A. Jimo polyprotein mRNA, partial cds6326326%5e-17681%AF369679.1Select seq gb|KM388820.1|Yellow fever virus strain 3A polyprotein gene, partial cds6276276%2e-17481%KM388820.1Select seq gb|AY161948.1|Yellow fever virus strain 03535098 polyprotein gene, partial cds6276276%2e-17481%AY161948.1Select seq gb|AY161939.1|Yellow fever virus strain Cepa#1 polyprotein gene, partial cds6276276%2e-17481%AY161939.1Select seq gb|AY161934.1|Yellow fever virus strain ARVO544 polyprotein gene, partial cds6276276%2e-17481%AY161934.1Select seq gb|AY540478.1|Yellow fever virus strain OBS5041 polyprotein gene, partial cds6276276%2e-17481%AY540478.1Select seq gb|AF369684.1|AF369684Yellow fever virus strain BA 55 polyprotein mRNA, partial cds6276276%2e-17481%AF369684.1Select seq gb|AF369677.1|AF369677Yellow fever virus strain IB AR 45244 polyprotein mRNA, partial cds6276276%2e-17481%AF369677.1Select seq gb|DQ859065.1|Uganda S virus polyprotein gene, complete cds623145859%3e-17369%DQ859065.1Select seq gb|HM582846.1|Yellow fever virus strain 15094 polyprotein gene, partial cds6216216%9e-17381%HM582846.1Select seq gb|AY161933.1|Yellow fever virus strain 1914 polyprotein gene, partial cds6196196%3e-17281%AY161933.1Select seq gb|AY161932.1|Yellow fever virus strain 1899/81 polyprotein gene, partial cds6196196%3e-17281%AY161932.1Select seq gb|DQ872412.1|Yellow fever virus strain CAREC788379 polyprotein gene, partial cds6186186%1e-17180%DQ872412.1Select seq gb|AY161947.1|Yellow fever virus strain OBS6530 polyprotein gene, partial cds6186186%1e-17181%AY161947.1Select seq gb|AY161945.1|Yellow fever virus strain OBS2243 polyprotein gene, partial cds6186186%1e-17181%AY161945.1Select seq gb|AY161944.1|Yellow fever virus strain HEB4246 polyprotein gene, partial cds6186186%1e-17181%AY161944.1Select seq gb|AY161936.1|Yellow fever virus strain HEB4236(153) polyprotein gene, partial cds6186186%1e-17181%AY161936.1Select seq gb|AF369689.1|AF369689Yellow fever virus strain SH 1339 polyprotein mRNA, partial cds6186186%1e-17180%AF369689.1Select seq gb|AF369688.1|AF369688Yellow fever virus strain SH 1464 polyprotein mRNA, partial cds6186186%1e-17180%AF369688.1Select seq gb|KM388819.1|Yellow fever virus strain 1A polyprotein gene, partial cds6166165%4e-17182%KM388819.1Select seq gb|AY161930.1|Yellow fever virus strain 287/78 polyprotein gene, partial cds6166166%4e-17180%AY161930.1Select seq gb|AY161940.1|Yellow fever virus strain OBS2240 polyprotein gene, partial cds6146146%1e-17080%AY161940.1Select seq gb|AY161937.1|Yellow fever virus strain 149 polyprotein gene, partial cds6146146%1e-17080%AY161937.1Select seq gb|AY161935.1|Yellow fever virus strain HEB4224 polyprotein gene, partial cds6146146%1e-17080%AY161935.1Select seq gb|AY161931.1|Yellow fever virus strain R35740 polyprotein gene, partial cds6146146%1e-17080%AY161931.1Select seq gb|AY540446.1|Yellow fever virus strain BeH141816 polyprotein gene, partial cds6146146%1e-17080%AY540446.1Select seq gb|AF369671.1|AF369671Yellow fever virus strain SH 28580 polyprotein mRNA, partial cds6146146%1e-17080%AF369671.1Select seq gb|AF369670.1|AF369670Yellow fever virus strain HD 38564 polyprotein mRNA, partial cds6146146%1e-17080%AF369670.1Select seq gb|AY161943.1|Yellow fever virus strain HEB4245 polyprotein gene, partial cds6106106%2e-16980%AY161943.1Select seq gb|AY161927.1|Yellow fever virus strain 1362/77 polyprotein gene, partial cds6096096%6e-16980%AY161927.1Select seq gb|AF369690.1|AF369690Yellow fever virus strain Dar Ar 276 polyprotein mRNA, partial cds6096096%6e-16980%AF369690.1Select seq gb|AF369687.1|AF369687Yellow fever virus strain SH1446 polyprotein mRNA, partial cds6096096%6e-16980%AF369687.1Select seq gb|AY161929.1|Yellow fever virus strain 1371 polyprotein gene, partial cds6076076%2e-16880%AY161929.1Select seq gb|AY839632.1|Yellow fever virus strain ArD76320/Senegal90 polyprotein gene, partial cds6076076%2e-16880%AY839632.1Select seq gb|AY161950.1|Yellow fever virus strain IQT5591 polyprotein gene, partial cds6056056%7e-16880%AY161950.1Select seq gb|AY161942.1|Yellow fever virus strain HEB4240 polyprotein gene, partial cds6056056%7e-16880%AY161942.1Select seq gb|AF369691.1|AF369691Yellow fever virus strain ArD93388 polyprotein gene, partial cds6056056%7e-16880%AF369691.1Select seq gb|AF369686.1|AF369686Yellow fever virus strain Jose Cachatra polyprotein mRNA, partial cds6056056%7e-16880%AF369686.1Select seq gb|U52402.1|YFU52402Yellow fever virus Nigeria46 non-structural protein 4A mRNA, partial cds6056057%7e-16878%U52402.1Select seq gb|HM582844.1|Yellow fever virus strain FMD1240 polyprotein gene, partial cds6036036%2e-16781%HM582844.1Select seq gb|KM388823.1|Yellow fever virus strain 7A polyprotein gene, partial cds5985985%1e-16582%KM388823.1Select seq gb|HM582847.1|Yellow fever virus strain FVB0196 polyprotein gene, partial cds5985986%1e-16580%HM582847.1Select seq gb|AY161949.1|Yellow fever virus strain OBS6745 polyprotein gene, partial cds5965966%4e-16580%AY161949.1Select seq gb|U52415.1|YFU52415Yellow fever virus Senegal65 non-structural protein 4A mRNA, partial cds5895897%5e-16378%U52415.1
niman Posted June 18, 2016 Author Report Posted June 18, 2016 LOCUS KX010996 10823 bp RNA linear VRL 08-MAY-2016 DEFINITION Yellow fever virus isolate CIC3, complete genome. ACCESSION KX010996 VERSION KX010996.1 GI:1024994400 KEYWORDS . SOURCE Yellow fever virus (YFV) ORGANISM Yellow fever virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus; Yellow fever virus group. REFERENCE 1 (bases 1 to 10823) AUTHORS Cui,S., Liang,Z., Wang,Q., Chen,L., Li,X., Li,J., Du,Y., Lu,G., Huo,D., Lyu,Y., Zhang,L., Zheng,Y., Chen,Y., Li,X. and Li,S. TITLE Direct Submission JOURNAL Submitted (25-MAR-2016) Department of Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevetion and Control, 16 Hepingli Middle Street, Dongcheng District, Beijing 100013, China COMMENT ##Assembly-Data-START## Assembly Method :: samtools v. v1.2 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10823 /organism="Yellow fever virus" /mol_type="genomic RNA" /isolate="CIC3" /isolation_source="urine" /host="Homo sapiens" /db_xref="taxon:11089" /country="China" /collection_date="18-Mar-2016" /note="clinical-imported case 3" CDS 121..10359 /note="gp1" /codon_start=1 /product="polyprotein" /protein_id="ANC33491.1" /db_xref="GI:1024994401" /translation="MSGRKAQGRTLGVNMVRRGVRSLSNKIKQKTKQIGNRPGPSRGV QGFIFFFLFNILTGKKLTAHLKKLWRMLDPRQGLAVLRKVKRVVASLMRGLASRKRRS NEMAMVPLLLLGLLALSGGVTLVRKNRWLLLNVTAEDLGKTFSVGTGNCTTNILEAKY WCPDSMEYNCPNLSPREEPDDIDCWCYGVENVRVAYGRCDAVGRSKRSRRAIDLPTHE NHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQRVVIALL VLAVGPAYSAHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVA IDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGL FGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENXNTDIKTLKFXALS GSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGG IWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHV SCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADD LTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIG KXFTQTMKGAERLAVMGDAAWDFSSAGGFFTSVGKGIHTVFXSAFQGLFGGLSWITKV IMGAVLIWVGINTRNMTMSMSMILVGVIMMFLSLGVGADQGCAVNFGKRELKCGDGIF VFRDSDDWLTKYSYYPEDPVKLASIIKASHEEGKCGLNSVDSLEHEMWRSRADEINAI FEENEVDISVVVQDPKNIYQRGTHPFSRIRDGLQYGWKTWGKNLVFSPGRKNGSFIID GKSRKECPFSNRVWNSFQIEEFGMGVFTTRVFMDATFDYSVDCDGAILGAAVNGKKSA HGSPTFWMGSHEVNGTWMIHTLETLDYKECEWPLTHTIGTSVEESDMFMPRSIGGPVS SHNRIPGYKVQTNGPWMQVPLEVKREVCPGTSVVVDSNCDGRGKSTRSTTDSGKIIPE WCCRSCTMPPVSFHGSDGCWYPMEIRPMKTSDSHLVRSWVTAGEVHAVPFGLVSMMIA MEVVLRRRQGPKQMLVGGVVLLGAMLVGQVTVLDLVKFVVAVGLHFHEINNGGDAMYM ALIASFSIRPGLLMGFGLRTLWSPRERLVMAFGAAMVEIALGGMMGGLWQYLNAVSLC VLTINAISSRKASNMILPLMALMTPMTMHEVRMATMLFCTVVIIGVLHQNSKXTSXXK TIPIVALTLTSYMGLTQPFLGLCAYMSTQVFGRRSIPVNEALAAAGLVGVLAGLAFQD MENFLGPIAVGGILMMLVSVAGRVDGLELRKLGEISWEEEAEISGSSSRYDXALSEQG EFKLLSEDKVPWDQIVMTSLALVGAAIHPFALLLVLGGWILHIKGARRSGDVLWDIPT PKVIEECEHLEDGIYGIFQSTFLGASQRGVGVAQGGVFHTMWHVTRGAFLLRNGKKLV PSWASVKEDLVAYGGSWKLDGRWDGEEEVQLIAAVPGKSVVNVQTKPSLFKVKNGGEI GAVALDYPSGTSGSPIVNRNGEVVGLYGNGILVGDNSFVSAISQTELKEESKEELQEI PTMLKKGMTTILDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFQG LDVKFHTQAFSAHGSGKEVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIA ARGWAAHRARANESATILMTATPPGTSDEFPHSNGEIEDVQTDIPSEPWTTGHEWILA DKRPTAWFLPSIRAANVMAASLRKAGKNVVVLNRKTFEKEYPTIKQKKPDFILATDIA EMGANLCVERVLDCRTAYKPVLVDEGKKVAIKGPLRISASSAAQRRGRIGRNPNRDGD SYYYSEPTSEDNAHHVCWLEASMLLDNMEVRGGMVAPLYGIEGTKTPVSPGEMRLRDD QRRVFRELVRGCDLPVWLAWQVAKAGLKTNDRKWCFEGPEEHXILNDNGETVKCRSPG GAKRALRPRWCDERVSSDQSALADFIKFAEGRRGAAEMLVVLTELPDFLAKKGGEAMD TISVFLHSEEGSRAYRNALSMMPEAMTIVMLFLLAGLLTSGAVIFFMSPKGMSRMSMA MGTMAGSGYLMFLGGVKPTHISYVMLIFFVLMVVIIPEPGQQRSIQDNQVAYLIIGIL TLLSVVAANELGMLEKTKEDFFGKXDITTPSGAIPWSWPDLDLKPGAAWTVXVGIVTM LSPMLHHWIKVEYGNLSLSGIAQSASVLSFMDKGIPFMKMNISVVILLVSGWNSITVI PLLCGIGGAMLHWTLILPGIKAQQSKLAQKRVFHGVAKNPVVXGNPTADIEEAPEMPA LYEKKLALYLLLALSLMSVAMCRTPFSLAEGIVLSSAALGPLIEGNTSLLWNGPMAVS MTGVMRGNYYAFVGVMYNLWKMKTGRRGRASGKTLGEVWKRELNLLDKQQFEMYKRTD IIEVDRDMARRHLAEGKVDTGVAVSRGTAKLRWFHERGYVKLEGRVTDLGCGRGGWCY YAAAQKEVSGVKGYTLGRDGHEKPMNVQSLGWNIVTFKDKTDXHRLEPLKCETLLCDI GESSPSSATEGERTLRVLDTVEKWLACGVDNFCIKVLAPYMPDVIEKLELLQRRFGGT VIRNPLSRNSTHEMYYVSGARSNITFTVNQTSRLLMRRMRRPTGKVTLEADVILPIGT RSVETDKGPLDKDAIEERVERIKNEYATTWFYDNDNPYRTWHYCGSYVTKTSGSAASM INGVIKILTFPWDRIEEVTRMAMTDTTPFGQQRVFKEKVDTRAKDPPAGTRKIMKVVN RWLFRHLSREKNPRLCTKEEFIAKVRSHAAVGAFLEEQEQWKTANEAVLDPKFWEMVD AERKLHQQGRCQSCVYNMMGKREKKLSEFGKAKGSRAIWYMWLGARFLEFEALGFLNE DHWASRENSGGGVEGIGLQYLGYVIRDLSTKEGGGFYADDTAGWDTRITEADLDDEQE IMSYMSPEQRKLAWAIMEMTXKXKVVKVLRPAPGGKAFMDIISRRDQRGSGQVVTYAL NTITNLKVQLIRMAEAEMVINHQHVQECGENVLERLETWLAENGCDRLSRMAVSGDDC VVRPVDDRFGLALSHLNAMSKVRKDISEWQPSKGWTDWENVPFCSHHFHELVLKDGRK IVVPCRDQDELIGRGRVSPGNGWMIKETACLSKAYANMWSLMYFHKRDMRLLSFAVSS AVPTAWVPSGRTTWSVHGRGEWMTTEDMLDVWNRVWVLNNPHMTDKTTIKEWRDVPYL TKRQDKLCGSLIGMXNRATWASHIHLVIHRIRTLIGQEKFTDYLTVMDRYSVDADLQP GELI" ORIGIN 1 agtaaatccc tgtgtgctaa ttgaggtgca ttggtctgca aatcgagttg ctaggcaata 61 aacacatttg gattwayttt aatcgttcgt tgagcgatta gcagagaact gaccagagaa 121 atgtctggtc gaaaagctca gggtagaacc ctgggcgtca atatggtaag acgaggggtt 181 cgctccttgt caaacaaaat aaaacaaaaa acaaaacaga ttggaaacag acctggccct 241 tcaagaggtg ttcaaggatt tattttcttc tttttgttta acattctgac tgggaaaaag 301 ttgacwgctc atctaaaaaa actctggagg atgcttgatc caaggcaggg gcttgctgta 361 ctgcgaaagg tcaaaagagt tgtagctagc ttaatgagag ggctggcttc caggaaacgt 421 agatccaatg aaatggccat ggtaccactc ctgttactgg gtttgttggc tctatcagga 481 ggagtgaccc tcgtcagaaa gaacagatgg ttgctcctga atgtaactgc tgaagacctg 541 gggaaaacgt tttcagtggg aactgggaat tgcaccacga atattctgga agcaaaatac 601 tggtgccccg actcaatgga atacaattgc cccaatctca gtccaagaga agagccagat 661 gacatagatt gctggtgtta tggagtggaa aatgtcagag tggcctatgg aagatgtgat 721 gcggtagggc gatcaaaacg ctccaggaga gcgattgatc tacccacaca tgagaaccat 781 ggactaaaga ctcggcagga gaagtggatg acaggcagaa tgggtgagag gcagctccag 841 aagattgaaa gatggctggt taggaatcca ttttttgcgg tcacagcatt ggcaatagct 901 tatctggtgg gtaacaacac gacacaacga gtggtcatag cactactggt tctagcggtt 961 ggtccagcgt actctgccca ttgcataggg ataaccgaca gagatttcat tgaaggtgtc 1021 catgggggca cttgggtgtc agccactctg gagcaggaca aatgcgtgac tgtaatggcc 1081 cctgacaaac cttctctgga catctcacta caaacagtgg caatcgatgg accggctgaa 1141 gcgaggaagg tttgctacag tgcagtccta acccatgtga agatcaatga caaatgcccg 1201 agcactggtg aggcccacct tgcagaggaa aatgatggtg acaatgcttg taaacggaca 1261 tattctgaca gaggctgggg caatggctgt ggtctttttg ggaaaggaag catcgtggct 1321 tgtgccaagt ttacatgtgc caaatctatg agtctctttg aggtggatca gaccaaaatc 1381 caatatgtca tcagggccca gctccatgtg ggtgctaaac aggaaaacyg gaacacagac 1441 ataaaaacgc tgaaatttga kgctctttct ggctcacagg aggctgaatt cactggttat 1501 ggaaaggcaa cactagagtg tcaggtccag actgccgtgg actttgggaa cagctacatc 1561 gcagagatgg aaaaagatag ctggatcgtt gaccgccaat gggcacagga cttgacactg 1621 ccatggcaga gtgggagtgg tggcatatgg agagaaatgc accaccttgt tgagtttgag 1681 cccccacatg ctgccacaat tagggtgctg gccttgggca atcaagaagg ctccttgaag 1741 accgctctca caggcgctat gcgcgtcacc aaggatgaga atgacaacaa cttgtacaaa 1801 ctgcacggtg gtcacgtctc ctgtagagtg aaactgtcag ccctcactct caaaggaaca 1861 tcctacaaga tgtgcacaga caaaatgtca tttgtcaaga atccaacgga tacagggcat 1921 ggcacagttg tcatgcaagt aaaggtcccc aaaggggccc catgcaagat tcccgtgatt 1981 gtggcagatg acctaacggc agcagtgaac aaaggcatct tggtcactgt caatcctatt 2041 gcatccacaa atgatgatga agttctgatt gaggtcaatc ccccttttgg ggatagctac 2101 atcatagttg ggactggaga ctcacgactg acctatcagt ggcacaaaga agggagttca 2161 ataggaaaat ygttcacaca gacaatgaaa ggagctgaac gtcttgcagt gatgggtgat 2221 gctgcttggg attttagttc tgctgggggg ttcttcacat ctgtgggaaa aggaatccat 2281 accgtgtttg rctcggcctt ccaggggctg tttggtggct tgagttggat cacgaaagtc 2341 atcatgggag cagtgctcat ctgggtggga ataaacaccc gcaacatgac catgtccatg 2401 tccatgatct tggtaggtgt gatcatgatg tttctttcac taggagttgg ggctgaccaa 2461 ggatgtgctg ttaactttgg gaaacgcgag ctcaaatgcg gagatggcat ctttgtgttt 2521 agagactctg atgactggct cacaaagtac tcatactatc ctgaagaccc tgtcaaattg 2581 gcatccatca ttaaagcctc ccacgaggag ggcaaatgtg gattgaattc agttgattcc 2641 ctcgaacacg agatgtggag gagtagggcg gatgagatca acgccatttt tgaagaaaat 2701 gaagtagaca tctcggtcgt cgtccaagac ccaaagaaca tctaccaaag agggacccac 2761 ccgttctcaa ggatccgtga cggattgcag tatggatgga agacctgggg aaaaaacctt 2821 gttttctcac cagggaggaa gaacggcagc ttcatcattg acgggaagtc acgaaaggag 2881 tgccccttct ctaacagagt gtggaactca ttccagattg aggagtttgg catgggggtc 2941 ttcacaacac gagtgtttat ggacgcgacc tttgactatt cagtggactg tgatggagcc 3001 atcctgggtg cagcggtgaa tggaaagaag agtgcccatg gatcacccac attttggatg 3061 ggaagtcatg aagtcaatgg aacgtggatg atacacactt tggaaactct tgattacaag 3121 gagtgtgaat ggccactgac acacactatt ggaacctcag tagaagaaag tgacatgttc 3181 atgccccggt ccattggagg tccggtgagt tctcacaacc gcatcccggg ttacaaggtg 3241 caaaccaatg ggccatggat gcaagtcccc ctggaagtaa aaagggaagt ctgtccaggg 3301 acaagcgtgg tggtggactc caactgtgat ggacgtggaa aatcaacgag atcaaccact 3361 gacagtggga aaataatccc ggaatggtgt tgcagatctt gyactatgcc tccagtcagc 3421 ttccatggaa gcgatggttg ttggtatcct atggagatca gacccatgaa aacatccgac 3481 agccacctag tgagatcctg ggtgactgca ggagaagttc atgcagtacc ctttggactg 3541 gtgagcatga tgattgccat ggaggtggtg ttgcgcagaa ggcaaggacc aaaacaaatg 3601 ctggtaggag gagttgtgct gcttggagcg atgttagtgg gacaagtcac agtcttagac 3661 cttgtgaagt ttgttgtggc agtgggattg cacttccatg aaattaataa cggaggagat 3721 gccatgtaca tggcattgat tgccagcttt tccatccggc caggcctgct catgggcttt 3781 gggctgcgca cactgtggag tcctcgcgag cgacttgtaa tggcatttgg agcagccatg 3841 gttgagattg ccttaggtgg aatgatgggt gggctttggc agtacttgaa cgccgtttca 3901 ctgtgtgtgc tcaccatcaa tgcaatctca tcaaggaagg cctcaaatat gatcctcccc 3961 ctgatggcac tcatgactcc catgacaatg catgaggtga ggatggcgac gatgctgttc 4021 tgcactgttg tcataatagg ggtgcttcat cagaattcaa aasacacatc wawsmmaaag 4081 accattccca ttgtagccct gacactgacc tcatacatgg gcttgaccca gccctttcta 4141 gggctgtgtg catacatgtc cacgcaggtg tttggcagaa ggagtatacc tgtgaatgaa 4201 gccttggcag cggctggctt ggtgggagtg ctagcagggc tagccttcca agacatggaa 4261 aactttttgg gtccaatagc ggtggggggg atcctcatga tgttagttag tgtggcaggg 4321 agagttgatg gactagagct caggaaactt ggtgaaatct cctgggaaga agaagctgaa 4381 ataagtggaa gctctagccg ctatgatgyg gcactcagtg agcagggtga atttaaactc 4441 ctctcagagg acaaagtgcc ctgggaccag atagtaatga catccctagc cctcgtggga 4501 gcagccatac atccatttgc cctcttgctg gtcttgggag gatggatcct gcacattaaa 4561 ggtgctagga ggagtgggga tgttctttgg gacattccta cgccaaaggt gattgaggaa 4621 tgtgagcacc tggaggatgg gatctatggc atatttcagt caaccttcct tggagcctcg 4681 cagcgaggtg ttggagtggc gcagggaggg gtcttccaca caatgtggca tgtcactagg 4741 ggggcattcc tcttgaggaa tggaaagaaa ctggttccgt cttgggcttc tgtgaaggag 4801 gatctggtgg cttatggtgg ttcctggaaa ctagacggga gatgggatgg tgaggaggaa 4861 gtccaactca tcgctgctgt gcctggaaaa tctgttgtca acgttcaaac aaaaccaagc 4921 ttgttcaarg tgaaaaatgg tggtgagatt ggagcagttg ctctagacta ccccagtgga 4981 acctcaggct cccccattgt gaaccgaaat ggtgaagtgg ttgggctcta tggcaatgga 5041 attctggtgg gtgataactc ctttgtgtct gccatctcac aaactgaatt gaaggaagaa 5101 tccaaagaag aactgcaaga aataccaact atgctgaaaa aaggaatgac caccatcctt 5161 gacttccacc ctggggcggg gaaaacccgt aggttcctgc ctcaaatatt ggcggagtgt 5221 gccagaaggc gtttgcgcac tctggtatta gcacccacca gggttgtttt gtcagagatg 5281 aaagaagctt ttcaggggtt ggatgtgaaa ttccacacac aagctttctc agcccatggg 5341 agtgggaagg aggtcattga cgcaatgtgc catgcaaccc ttacatatag aatgctggaa 5401 ccaacaaggg tagtcaactg ggaggtcatt attatggatg aggcgcactt tctggatcct 5461 gctagcatag cagcgagagg ctgggcggct catagagcaa gagcaaatga gagcgccacc 5521 atacttatga ccgccacccc accaggcacc agtgacgaat tccctcactc caatggtgag 5581 attgaggacg tccagactga catccccagc gagccatgga ccacaggaca tgaatggatc 5641 ttggcggaca agcgcccaac tgcatggttc cttccatcga tcagagcagc aaatgtcatg 5701 gcagcctcgc tgcggaaagc gggaaaaaat gtggtggtac tgaataggaa aacctttgaa 5761 aaggagtacc ccaccattaa gcagaagaaa ccggatttca tccttgccac cgatatcgct 5821 gagatgggag caaacttgtg tgtggagaga gtcttggact gcagaactgc ctacaagcct 5881 gtcctggttg atgaagggaa gaaggtggct atcaaagggc cgctacgaat ctcagcgtca 5941 tcggccgctc agaggagagg acgcattgga cgcaatccca acagagatgg tgactcttac 6001 tactactcag aacctaccag tgaggacaat gcacaccatg tgtgctggct ggaggcttcc 6061 atgctcctgg ataacatgga ggttagaggg gggatggttg ctccacttta tggcattgag 6121 ggaacaaaga ctcccgtctc tccaggagaa atgaggctaa gagatgatca gagaagggtc 6181 tttagagagt tggtgcgagg gtgtgatttg ccagtgtggt tggcatggca agtggcaaaa 6241 gccggcctga agaccaatga ccgcaaatgg tgttttgagg gtcccgaaga gcatgamata 6301 ctcaatgaca atggtgaaac agtaaagtgt agatctccgg gcggagcaaa aagagcattg 6361 agacctagat ggtgtgacga gagagtttcc tcagaccaga gtgccttggc tgacttcatt 6421 aagtttgcag aaggtagaag aggggctgct gagatgcttg tggtcctcac ggagttgccc 6481 gacttcctgg caaagaaggg tggggaagcc atggatacca tcagtgtgtt cctacattct 6541 gaagagggtt caagagcgta cagaaatgcc ctgtcaatga tgccagaagc catgaccatt 6601 gtcatgctct tcctgcttgc cggactcttg acctcaggag cggtgatttt cttcatgtcg 6661 ccaaaaggca tgagtagaat gtcaatggca atgggtacca tggctggcag tggatatctc 6721 atgtttctgg ggggagtaaa accaacccac atctcttacg tcatgttaat attctttgtc 6781 ctcatggtcg tcataattcc cgaaccagga cagcagagat caatccagga taaccaagtt 6841 gcctacctca taattgggat cttgacattg ttatcagttg tggcagctaa tgaactaggg 6901 atgctggaga agaccaagga agattttttt ggaaagagmg acatcacaac accaagtggg 6961 gcaatcccat ggagttggcc tgacctggat ctgaaacctg gggcggcctg gacagtctwt 7021 gtgggaatcg tgacgatgtt gtctcccatg ttacaccatt ggataaaagt tgagtatggc 7081 aatttgtcac tatcgggaat agcccaatct gcctcagttc tttcatttat ggacaaagga 7141 attcccttca tgaaaatgaa tatatctgtg gtcatacttt tggtcagtgg ctggaattca 7201 atcacagtga tccctctttt gtgcggcatt ggtggagcca tgctgcactg gacgctcata 7261 cttcctggga ttaaagccca gcaatcaaag ctggctcaaa aaagagtttt tcatggagta 7321 gcaaaaaatc cagttgttga kggcaatcca actgctgaca ttgaggaagc cccagaaatg 7381 ccagctttat atgaaaagaa gctggctctt tacctccttc tggccctaag cctcatgtca 7441 gttgccatgt gcagaacccc tttttcctta gcggaaggaa tagtactgtc atctgccgcc 7501 cttggacctc tcattgaggg gaacactagt ctgttgtgga atggcccaat ggccgtttcc 7561 atgactggag tcatgcgtgg caactactac gcttttgtgg gagtcatgta caatctctgg 7621 aaaatgaaaa cagggcgtag agggagagca agtggaaaaa cattgggtga ggtctggaag 7681 cgtgaactta acytgctaga caaacaacaa tttgaaatgt acaaaagaac agacatcatt 7741 gaggtggacc gagacatggc acgacgacac ttggcagagg gaaaggtgga cacgggagtg 7801 gccgtgtcga gagggactgc aaagctgaga tggttccacg agcgtggcta tgtgaagcta 7861 gaaggaaggg tcaccgatct tgggtgtgga cgtggaggct ggtgctacta tgcagcagct 7921 caaaaagaag ttagtggtgt gaaggggtat acccttggca gagatggcca tgagaaacct 7981 atgaatgtcc aaagcttggg atggaatatt gtgactttta aggacaagac tgatrttcac 8041 cgactggagc cactcaagtg tgaaactctc ctctgtgaca tcggagaatc gtccccatcc 8101 tccgcaactg agggtgagag gaccttaaga gttctggaca cagttgaaaa gtggttggct 8161 tgtggagtgg ataacttttg catcaaagtt ctggcaccat acatgcccga tgtgatagag 8221 aaactggagc ttcttcaaag aagattcggt ggaaccgtca tcaggaatcc tctgtccaga 8281 aattctactc atgaaatgta ctacgtttca ggagcaagaa gtaacatcac attcacagtt 8341 aaccagacat cacgcctgct gatgcgaagg atgaggcggc ccacaggcaa agttaccttg 8401 gaagctgatg tcattcttcc gataggcacg cgcagtgtgg aaactgataa aggcccattg 8461 gataaggatg ctattgagga aagagttgag agaatcaaga atgaatatgc cactacatgg 8521 ttctatgaca atgacaaccc gtatagaacg tggcattatt gtggctccta tgtgaccaaa 8581 acgtcaggaa gtgcagccag catgataaat ggagtcatca aaatcttgac ttttccatgg 8641 gacaggatag aagaagtcac aagaatggca atgactgaca ccacaccttt tggacaacaa 8701 agagttttca aggagaaagt agacacaaga gcaaaagacc ctcctgctgg aacaaggaag 8761 atcatgaagg tggtgaatag atggttgttt cggcatctgt ccagggagaa gaaccccagg 8821 ttgtgcacca aagaagaatt cattgccaaa gtacggagcc atgcagcagt gggggctttt 8881 ctagaggaac aagagcagtg gaaaacggcc aatgaggcag tccttgatcc aaagttttgg 8941 gaaatggtcg atgcagaacg caaacttcat cagcaggggc gatgccaatc ctgtgtgtac 9001 aacatgatgg gaaagaggga aaagaaactc tctgaatttg gaaaggccaa agggagccgt 9061 gctatctggt acatgtggct tggggcacgg ttccttgagt ttgaagctct tgggttttta 9121 aatgaagatc actgggcctc ccgggagaac tcggggggag gagttgaggg cataggactc 9181 cagtacttgg gctatgttat cagggacttg tcaaccaaag aaggtggagg gttttatgcg 9241 gatgacacgg cagggtggga cacacgcatc acagaagctg acctggatga cgagcaagag 9301 atcatgagtt acatgagccc tgaacaaagg aagctggcct gggctataat ggaaatgaca 9361 twcaarmaca aagtggttaa ggtgctgagg ccagccccag gaggcaaggc cttcatggac 9421 atcatcagcc ggagagacca aagggggtca ggacaagttg tgacatacgc cctcaacacc 9481 ataaccaatc taaaagtcca gctcataaga atggctgaag ctgaaatggt gatcaaccat 9541 cagcatgtgc aggagtgtgg tgaaaatgtc ttagagcggc ttgaaacttg gcttgctgaa 9601 aacggatgtg acagattgag ccgaatggct gtgagtgggg atgattgtgt tgtgagaccg 9661 gtggatgaca gatttggcct ggccctttcc catcttaatg caatgtccaa agttaggaag 9721 gacatttcag aatggcaacc ctccaaagga tggacagatt gggaaaatgt tcctttctgc 9781 tctcaccact tccatgaact ggtgttgaaa gatgggagga agatagtggt gccttgcaga 9841 gatcaagatg aactgatagg gagagggaga gtgtccccag gaaatggctg gatgatcaag 9901 gaaacagcct gcctcagcaa agcttacgca aacatgtggt cactgatgta ctttcacaag 9961 agggacatga ggctactttc attcgctgtc tcctccgctg ttccaacggc ctgggtgccc 10021 agtggaagga caacgtggtc tgtccacgga agaggggagt ggatgacaac tgaggacatg 10081 ctagatgtct ggaacagggt gtgggtgttg aataacccgc acatgacgga caaaacaacc 10141 atcaaggagt ggagagatgt tccctacctc acaaagagac aggataagct ttgcgggtca 10201 ctgataggaa tgrcaaacag ggccacatgg gcatctcaca tccaccttgt gatccaccgg 10261 atcagaactc taataggtca agagaagttc acagactacc tcaccgtcat ggacaggtat 10321 tctgttgatg ccgaccttca gccaggagag cttatctgag acattacaac atggaaaacc 10381 gggataaaaa ctacgggtgg agaaccggac tccccacttg aaacatgtaa atagaaaacc 10441 gggataaaaa ctacgggcgg agaaccggac tccccactga ataggttata aacgtcagcc 10501 caggatccaa aatttgaatg ggtcttgcca ccgctaagct gtgaggcggt gcgggctggg 10561 acagccgttt cccgggcaac gacatgcctg gtttctggga cttcccaacc cggagtaaaa 10621 cgaaggagcc tccgccacca ccctcccacg gggtgttgga aagatggggt ctagaggtta 10681 gaggagaccc tccagggaaa ttagtgggac catattgacg ccagggaaag accggagtgg 10741 ttctctgctt ttcctccagg ggtctgcgag cacagtttgc tctagaagaa gcagaccttt 10801 ggatgacaaa acacaaaacc act
niman Posted June 18, 2016 Author Report Posted June 18, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX010996.1|Yellow fever virus isolate CIC3, complete genome1840118401100%0.0100%KX010996.1Select seq gb|KX027336.1|Yellow fever virus isolate CIC4, complete genome1831418314100%0.099%KX027336.1Select seq gb|KX010995.1|Yellow fever virus isolate CIC2, complete genome1830718307100%0.099%KX010995.1Select seq gb|KX010994.1|Yellow fever virus isolate CIC1, complete genome1796217962100%0.099%KX010994.1Select seq gb|AY968064.1|Yellow fever virus strain Angola71, complete genome1760217602100%0.098%AY968064.1Select seq gb|DQ235229.1|Yellow fever virus strain Couma, complete genome1131011310100%0.084%DQ235229.1Select seq gb|AY968065.1|Yellow fever virus strain Uganda48a, complete genome1127711277100%0.084%AY968065.1Select seq gb|JN620362.1|Yellow fever virus strain Uganda 2010, complete genome1126611266100%0.084%JN620362.1Select seq gb|JF912185.1|Yellow fever virus strain BeAR513008, complete genome87498749100%0.079%JF912185.1Select seq gb|JF912179.1|Yellow fever virus strain BeAR378600, complete genome87498749100%0.079%JF912179.1Select seq gb|JF912186.1|Yellow fever virus strain BeH526722, complete genome87228722100%0.079%JF912186.1Select seq gb|AY603338.1|Yellow fever virus strain Ivory Coast 1999, complete genome87158715100%0.079%AY603338.1Select seq gb|JF912184.1|Yellow fever virus strain BeH463676, complete genome87098709100%0.079%JF912184.1Select seq gb|JF912183.1|Yellow fever virus strain BeH423602, complete genome87028702100%0.079%JF912183.1Select seq gb|KM388817.1|Yellow fever virus strain 2A polyprotein gene, complete cds87008700100%0.079%KM388817.1Select seq gb|AY572535.1|Yellow fever virus strain Gambia 2001, complete genome86978697100%0.079%AY572535.1Select seq gb|KM388816.1|Yellow fever virus strain 10A polyprotein gene, complete cds86918691100%0.079%KM388816.1Select seq gb|JX898873.1|Yellow fever virus isolate ArD149214 from Senegal, complete genome86898689100%0.079%JX898873.1Select seq gb|JX898874.1|Yellow fever virus isolate ArD149194 from Senegal, complete genome86868686100%0.079%JX898874.1Select seq gb|JX898868.1|Yellow fever virus isolate HD117294 from Senegal, complete genome86828682100%0.079%JX898868.1Select seq gb|JX898875.1|Yellow fever virus isolate ArD149815 from Senegal, complete genome86808680100%0.079%JX898875.1Select seq gb|JF912187.1|Yellow fever virus strain BeH622205, complete genome86798679100%0.079%JF912187.1Select seq gb|JF912188.1|Yellow fever virus strain BeH622493, complete genome86758675100%0.079%JF912188.1Select seq gb|JF912180.1|Yellow fever virus strain BeH394880, complete genome86628662100%0.079%JF912180.1Select seq gb|JX898870.1|Yellow fever virus isolate ArD121040 from Senegal, complete genome86558655100%0.079%JX898870.1Select seq gb|JX898880.1|Yellow fever virus isolate ArD181564 from Senegal, complete genome86508650100%0.079%JX898880.1Select seq gb|JX898878.1|Yellow fever virus isolate ArD181250 from Senegal, complete genome86488648100%0.079%JX898878.1Select seq gb|JX898877.1|Yellow fever virus isolate ArD181464 from Senegal, complete genome86488648100%0.079%JX898877.1Select seq gb|JF912189.1|Yellow fever virus strain BeAR646536, complete genome86398639100%0.079%JF912189.1Select seq gb|JF912190.1|Yellow fever virus strain BeH655417, complete genome86378637100%0.079%JF912190.1Select seq gb|JF912182.1|Yellow fever virus strain BeH422973, complete genome86348634100%0.079%JF912182.1Select seq gb|HM582851.1|Yellow fever virus strain TVP11767 polyprotein gene, complete cds86308630100%0.079%HM582851.1Select seq gb|JX898876.1|Yellow fever virus isolate ArD156468 from Senegal, complete genome86268626100%0.079%JX898876.1Select seq gb|KM388815.1|Yellow fever virus strain 9A polyprotein gene, complete cds86158615100%0.079%KM388815.1Select seq gb|KM388814.1|Yellow fever virus strain 6A polyprotein gene, complete cds86158615100%0.079%KM388814.1Select seq gb|JX898869.1|Yellow fever virus isolate DakArAmt7 from Cote d'Ivoire, complete genome86068606100%0.079%JX898869.1Select seq gb|AY640589.1|Yellow fever virus strain ASIBI, complete genome85888588100%0.079%AY640589.1Select seq gb|KF769016.1|Yellow fever virus strain Asibi, complete genome85838583100%0.079%KF769016.1Select seq gb|KM388818.1|Yellow fever virus strain 8A polyprotein gene, complete cds85708570100%0.079%KM388818.1Select seq gb|KF907504.1|Yellow fever virus strain 88/1999, complete genome85478547100%0.078%KF907504.1Select seq gb|U21056.1|YFU21056Yellow fever virus French viscerotropic strain, complete genome85258525100%0.078%U21056.1Select seq gb|JX898872.1|Yellow fever virus isolate ArD114972 from Senegal, complete genome85008500100%0.078%JX898872.1Select seq gb|JX898871.1|Yellow fever virus isolate ArD114896 from Senegal, complete genome84938493100%0.078%JX898871.1Select seq gb|DQ100292.1|Yellow fever virus strain 17DD-Brazil, complete genome84868486100%0.078%DQ100292.1Select seq gb|U21055.1|YFU21055Yellow fever virus French neurotropic strain, complete genome84808480100%0.078%U21055.1Select seq gb|GQ379162.1|Yellow fever virus strain case #1, complete genome84688468100%0.078%GQ379162.1Select seq gb|U17066.1|YFU17066Yellow fever virus vaccine strain 17DD, complete genome84688468100%0.078%U17066.1Select seq emb|X03700.1|Yellow fever virus complete genome, 17D vaccine strain84648464100%0.078%X03700.1Select seq gb|KF769015.1|Yellow fever virus strain 17D-204, complete genome84598459100%0.078%KF769015.1Select seq gb|JN811143.1|Yellow fever virus 17D YF-VAX Vero adapted Series C P11, complete genome84598459100%0.078%JN811143.1Select seq gb|JX503529.1|Yellow fever virus strain YF/Vaccine/USA/Sanofi-Pasteur-17D-204/UF795AA/YFVax, complete genome84598459100%0.078%JX503529.1Select seq gb|JN628279.1|Yellow fever virus strain 17D RKI, complete genome84598459100%0.078%JN628279.1Select seq gb|AF052444.1|AF052444Yellow fever virus clone HONG8 polyprotein gene, complete cds84598459100%0.078%AF052444.1Select seq gb|JX949181.1|Yellow fever virus strain 17D polyprotein gene, complete cds84558455100%0.078%JX949181.1Select seq gb|FJ654700.1|Yellow fever virus 17D/Tiantan, complete genome84558455100%0.078%FJ654700.1Select seq gb|DQ118157.1|Yellow fever virus isolate YF-AVD2791-93F/04 from Spain, complete genome84558455100%0.078%DQ118157.1Select seq emb|X15062.1|Yellow fever virus genomic RNA84558455100%0.078%X15062.1Select seq gb|AF052446.1|AF052446Yellow fever virus clone HONG10 polyprotein gene, complete cds84558455100%0.078%AF052446.1Select seq gb|AF052439.1|AF052439Yellow fever virus clone HONG3 polyprotein gene, complete cds84558455100%0.078%AF052439.1Select seq gb|AF052437.1|AF052437Yellow fever virus clone HONG1 polyprotein gene, complete cds84558455100%0.078%AF052437.1Select seq gb|U17067.1|YFU17067Yellow fever virus vaccine strain 17D-213, complete genome84558455100%0.078%U17067.1Select seq gb|GQ379163.1|Yellow fever virus strain case #2, complete genome84538453100%0.078%GQ379163.1Select seq gb|U54798.1|YFU54798Yellow fever virus strain 85-82H Ivory Coast, complete genome84518451100%0.078%U54798.1Select seq gb|JN811141.1|Yellow fever virus 17D YF-VAX Vero adapted Series A P11, complete genome84508450100%0.078%JN811141.1Select seq gb|AF052445.1|AF052445Yellow fever virus clone HONG9 polyprotein gene, complete cds84508450100%0.078%AF052445.1Select seq gb|AF052438.1|AF052438Yellow fever virus clone HONG2 polyprotein gene, complete cds84508450100%0.078%AF052438.1Select seq gb|JN811142.1|Yellow fever virus 17D YF-VAX Vero adapted Series B P11, complete genome84468446100%0.078%JN811142.1Select seq gb|AF094612.1|AF094612Yellow fever virus strain Trinidad 79A isolate 788379, complete genome83868386100%0.078%AF094612.1Select seq gb|JF912181.1|Yellow fever virus strain BeH413820, complete genome83748374100%0.078%JF912181.1Select seq gb|DQ322634.1|YFV replicon vector FMDV-2A-def, complete sequence8161827697%0.078%DQ322634.1Select seq gb|DQ322633.1|YFV replicon vector capsid-def, complete sequence8161827697%0.078%DQ322633.1Select seq gb|DQ322635.1|YFV replicon vector prME-def, complete sequence6504683781%0.078%DQ322635.1Select seq dbj|D14458.1|YFVCMENSYellow fever virus prM gene for precursor polyprotein, partial cds3155315534%0.080%D14458.1Select seq gb|GU951804.1|Yellow fever virus strain BeAn 131 polyprotein gene, partial cds2221222126%0.078%GU951804.1Select seq gb|AF052443.1|AF052443Yellow fever virus clone HONG7 polyprotein gene, partial cds2221222126%0.078%AF052443.1Select seq gb|AF052441.1|AF052441Yellow fever virus clone HONG5 polyprotein gene, partial cds2215221526%0.078%AF052441.1Select seq gb|AH005112.2|Yellow fever virus strain Y5 polyprotein and nonstructural protein NS2A mRNAs, partial cds2123247127%0.080%AH005112.2Select seq gb|AY960140.1|Yellow fever virus strain ArB28153 polyprotein gene, partial cds2120212017%0.086%AY960140.1Select seq gb|DQ322638.1|VEEV replicon vector YFV-C2, complete sequence2111211122%0.080%DQ322638.1Select seq gb|AF052440.1|AF052440Yellow fever virus clone HONG4 polyprotein gene, partial cds2107210722%0.080%AF052440.1Select seq gb|L06480.1|YFVCAPSIDMYellow fever virus capsid protein, M protein, and envelope protein mRNAs2107210722%0.080%L06480.1Select seq gb|DQ322642.1|VEEV replicon vector YFV-C3opt, complete sequence1918191822%0.078%DQ322642.1Select seq gb|DQ322640.1|VEEV replicon vector YFV-C3opt-NS2mut, complete sequence1918191822%0.078%DQ322640.1Select seq gb|U23578.1|YFU23578Yellow fever virus isolate SE7445/Uganda/1964/Human envelope protein (E) mRNA, partial cds1808180814%0.087%U23578.1Select seq gb|U23577.1|YFU23577Yellow fever virus isolate M-112/Sudan/1940/Human envelope protein (E) mRNA, partial cds1799179914%0.087%U23577.1Select seq gb|AY839636.1|Yellow fever virus strain ETH2777/Ethiopia61 envelope protein gene, partial cds1784178414%0.087%AY839636.1Select seq gb|DQ068260.1|Yellow fever virus strain SSUD03-01 envelope protein gene, partial cds1772177214%0.086%DQ068260.1Select seq gb|U23573.1|YFU23573Yellow fever virus isolate DaHB1504/C. African Republic/1985/Human envelope protein (E) mRNA, partial cds1772177214%0.086%U23573.1Select seq gb|DQ068264.1|Yellow fever virus strain SSUD03-05 envelope protein gene, partial cds1766176614%0.086%DQ068264.1Select seq gb|DQ068263.1|Yellow fever virus strain SSUD03-04 envelope protein gene, partial cds1766176614%0.086%DQ068263.1Select seq gb|DQ068262.1|Yellow fever virus strain SSUD03-03 envelope protein gene, partial cds1766176614%0.086%DQ068262.1Select seq gb|AY839634.1|Yellow fever virus strain HB1782/CAR86 envelope protein gene, partial cds1766176614%0.086%AY839634.1Select seq gb|U23569.1|YFU23569Yellow fever virus isolate 7914/Kenya/1993/Human envelope protein (E) mRNA, partial cds1754175414%0.086%U23569.1Select seq gb|U23575.1|YFU23575Yellow fever virus isolate KE93-477/Kenya/1993/Mosquito envelope protein (E) mRNA, partial cds1748174814%0.086%U23575.1Select seq gb|U23571.1|YFU23571Yellow fever virus isolate ArB8883/C. African Republic/1977/Human envelope protein (E) mRNA, partial cds1748174814%0.086%U23571.1Select seq gb|U23576.1|YFU23576Yellow fever virus isolate Kouma/Ethiopia/1961/Human envelope protein (E) mRNA, partial cds1743174314%0.086%U23576.1Select seq gb|AY960138.1|Yellow fever virus strain ArA 20628 polyprotein gene, partial cds1727172717%0.081%AY960138.1Select seq gb|AY960137.1|Yellow fever virus strain Ara29436 polyprotein gene, partial cds1687168717%0.081%AY960137.1Select seq gb|AY960139.1|Yellow fever virus strain Ara6734 polyprotein gene, partial cds1660166017%0.080%AY960139.1Select seq gb|DQ859058.1|Wesselsbron virus strain SAH-177 99871-2 polyprotein gene, complete cds1517203076%0.067%DQ859058.1Select seq gb|EU707555.1|Wesselsbron virus strain SAH177, complete genome1512202176%0.067%EU707555.1Select seq gb|GU073158.1|Yellow fever virus strain Senegal/Ko/ARDX/2000 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073158.1Select seq gb|GU073145.1|Yellow fever virus strain Senegal/Ke/ArD149213/2000 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073145.1Select seq gb|GU073144.1|Yellow fever virus strain Senegal/Ke/ArD149194/2000 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073144.1Select seq gb|GU073136.1|Yellow fever virus strain Mali/Ba/HA872/1987 envelope glycoprotein (E) gene, partial cds1501150114%0.082%GU073136.1Select seq gb|GU073166.1|Yellow fever virus strain Senegal/Ko/HD117294/1995 envelope glycoprotein (E) gene, partial cds1498149814%0.082%GU073166.1Select seq gb|GU073143.1|Yellow fever virus strain Senegal/Ke/ArD149179/2000 envelope glycoprotein (E) gene, partial cds1498149814%0.082%GU073143.1Select seq gb|GU073152.1|Yellow fever virus strain Senegal/Ke/ArD156468/2001 envelope glycoprotein (E) gene, partial cds1489148914%0.082%GU073152.1Select seq gb|GU073141.1|Yellow fever virus strain Senegal/Ke/AnD26923/1978 envelope glycoprotein (E) gene, partial cds1489148914%0.082%GU073141.1Select seq gb|GU073137.1|Yellow fever virus strain Mali/Sa/ArA20267/1987 envelope glycoprotein (E) gene, partial cds1489148914%0.082%GU073137.1Select seq gb|GU073156.1|Yellow fever virus strain Senegal/Ke/ArD25112/1977 envelope glycoprotein (E) gene, partial cds1483148314%0.082%GU073156.1Select seq gb|GU073153.1|Yellow fever virus strain Senegal/Ke/ArD156583/2001 envelope glycoprotein (E) gene, partial cds1483148314%0.082%GU073153.1Select seq gb|GU073135.1|Yellow fever virus strain Gambia/MK/ArD27797/1979 envelope glycoprotein (E) gene, partial cds1480148014%0.081%GU073135.1Select seq gb|GU073163.1|Yellow fever virus strain Senegal/Ko/ArD114987/1995 envelope glycoprotein (E) gene, partial cds1471147114%0.081%GU073163.1Select seq gb|AY502949.1|Yellow fever virus strain Guinea/2000/human envelope protein (env) gene, partial cds1469146914%0.082%AY502949.1Select seq gb|GU073159.1|Yellow fever virus strain Senegal/Ko/ArD114891/1995 envelope glycoprotein (E) gene, partial cds1467146714%0.082%GU073159.1Select seq gb|GU073149.1|Yellow fever virus strain Senegal/Ke/ArD149815/2000 envelope glycoprotein (E) gene, partial cds1467146714%0.082%GU073149.1Select seq gb|GU073140.1|Yellow fever virus strain Senegal/Ka/HD122030/1996 envelope glycoprotein (E) gene, partial cds1467146714%0.082%GU073140.1Select seq gb|GU073161.1|Yellow fever virus strain Senegal/Ko/ArD114970/1995 envelope glycoprotein (E) gene, partial cds1465146514%0.081%GU073161.1Select seq gb|GU073148.1|Yellow fever virus strain Senegal/Ke/ArD149791/2000 envelope glycoprotein (E) gene, partial cds1465146514%0.081%GU073148.1Select seq gb|GU073142.1|Yellow fever virus strain Senegal/Ke/ArD121040/1996 envelope glycoprotein (E) gene, partial cds1460146014%0.082%GU073142.1Select seq gb|GU073146.1|Yellow fever virus strain Senegal/Ke/ArD149214/2000 envelope glycoprotein (E) gene, partial cds1456145614%0.082%GU073146.1Select seq gb|AY495561.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1449144915%0.081%AY495561.1Select seq gb|GU073164.1|Yellow fever virus strain Senegal/Ko/ArD114988/1995 envelope glycoprotein (E) gene, partial cds1447144714%0.082%GU073164.1Select seq gb|GU073131.1|Yellow fever virus strain Cameroon/HD78359/1990 envelope glycoprotein (E) gene, partial cds1447144714%0.081%GU073131.1Select seq gb|AY359908.2|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1447144715%0.081%AY359908.2Select seq gb|GU073157.1|Yellow fever virus strain Senegal/Ke/ArD99740/1993 envelope glycoprotein (E) gene, partial cds1445144514%0.082%GU073157.1Select seq gb|GU073147.1|Yellow fever virus strain Senegal/Ke/ArD149215/2000 envelope glycoprotein (E) gene, partial cds1442144214%0.082%GU073147.1Select seq gb|L02865.1|YFVENVAYellow fever virus wild-type envelope protein (env)1442144214%0.082%L02865.1Select seq gb|GU073160.1|Yellow fever virus strain Senegal/Ko/ArD114896/1995 envelope glycoprotein (E) gene, partial cds1440144014%0.081%GU073160.1Select seq gb|AY495571.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1440144015%0.081%AY495571.1Select seq gb|AY495567.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1440144015%0.081%AY495567.1Select seq gb|GU073130.1|Yellow fever virus strain CAR/Bo/ArB5656/1974 envelope glycoprotein (E) gene, partial cds1438143814%0.081%GU073130.1Select seq gb|AY359909.1|Yellow fever virus isolate DNA-YF-3 protein E gene, partial cds1438143815%0.081%AY359909.1Select seq gb|GU073139.1|Yellow fever virus strain Senegal/Ka/ArD122522/1996 envelope glycoprotein (E) gene, partial cds1436143614%0.082%GU073139.1Select seq gb|AY359907.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1436143614%0.081%AY359907.1Select seq gb|U23574.1|YFU23574Yellow fever virus isolate Dar1279/Senegal/1965/Human envelope protein (E) mRNA, partial cds1436143614%0.081%U23574.1Select seq gb|GU073133.1|Yellow fever virus strain CotedIvoire/SS/ARM154/1995 envelope glycoprotein (E) gene, partial cds1433143314%0.081%GU073133.1Select seq gb|AY495558.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1433143315%0.081%AY495558.1Select seq gb|AY839635.1|Yellow fever virus strain ArD76320/Senegal90 envelope protein gene, partial cds1433143314%0.081%AY839635.1Select seq gb|L02866.1|YFVENVBYellow fever virus envelope protein (env)1433143314%0.081%L02866.1Select seq gb|GU073150.1|Yellow fever virus strain Senegal/Ke/ArD149887/2000 envelope glycoprotein (E) gene, partial cds1431143114%0.081%GU073150.1Select seq gb|GU073162.1|Yellow fever virus strain Senegal/Ko/ArD114972/1995 envelope glycoprotein (E) gene, partial cds1429142914%0.081%GU073162.1Select seq gb|AY495569.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1429142914%0.081%AY495569.1Select seq gb|AY495562.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1429142915%0.080%AY495562.1Select seq gb|AY495566.1|Yellow fever virus isolate DNA-YF-7 protein E gene, partial cds1427142715%0.080%AY495566.1Select seq gb|AY495559.1|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1427142714%0.081%AY495559.1Select seq gb|GU073132.1|Yellow fever virus strain CotedIvoire/De/ArA523/1996 envelope glycoprotein (E) gene, partial cds1424142414%0.081%GU073132.1Select seq gb|JN226796.1|Wesselsbron virus from South Africa, complete genome1416184975%0.066%JN226796.1Select seq gb|U23580.1|YFU23580Yellow fever virus isolate V-528A/Colombia/1979/Mosquito envelope protein (E) mRNA, partial cds1415141514%0.081%U23580.1Select seq gb|GU073165.1|Yellow fever virus strain Senegal/Ko/ArD114989/1995 envelope glycoprotein (E) gene, partial cds1406140614%0.081%GU073165.1Select seq gb|U23570.1|YFU23570Yellow fever virus isolate AR350397/Brazil/1979/Mosquito envelope protein (E) mRNA, partial cds1406140614%0.081%U23570.1Select seq gb|AY495573.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1404140414%0.081%AY495573.1Select seq gb|AY632543.1|Sepik virus polyprotein gene, complete cds1402178976%0.066%AY632543.1Select seq gb|AY495570.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1402140214%0.080%AY495570.1Select seq gb|AY495568.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1398139814%0.080%AY495568.1Select seq gb|DQ859063.1|Sepik virus strain 7148 polyprotein gene, complete cds1397178476%0.066%DQ859063.1Select seq gb|AY495572.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1397139714%0.080%AY495572.1Select seq gb|U23579.1|YFU23579Yellow fever virus isolate T790882/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1397139714%0.081%U23579.1Select seq gb|U23568.1|YFU23568Yellow fever virus isolate 788379/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1393139314%0.081%U23568.1Select seq gb|GU073134.1|Yellow fever virus strain CotedIvoire/To/DakArAmt7/1973 envelope glycoprotein (E) gene, partial cds1389138913%0.081%GU073134.1Select seq gb|DQ837642.1|Sepik virus strain MK7148, complete genome1388177576%0.066%DQ837642.1Select seq gb|AY495574.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1380138014%0.080%AY495574.1Select seq gb|U23572.1|YFU23572Yellow fever virus isolate BA-55/Nigeria/1986/Human envelope protein (E) mRNA, partial cds1379137914%0.081%U23572.1Select seq gb|GU073151.1|Yellow fever virus strain Senegal/Ke/ArD156029/2001 envelope glycoprotein (E) gene, partial cds1370137013%0.081%GU073151.1Select seq gb|U23567.1|YFU23567Yellow fever virus isolate 56205/Nigeria/1991/Human envelope protein (E) mRNA, partial cds1370137014%0.080%U23567.1Select seq gb|U23566.1|YFU23566Yellow fever virus isolate 1914-81/Ecuador/1981/Human envelope protein (E) mRNA, partial cds1370137014%0.080%U23566.1Select seq gb|U23565.1|YFU23565Yellow fever virus isolate 1362/Peru/1977/Human envelope protein (E) mRNA, partial cds1370137014%0.080%U23565.1Select seq gb|GU073138.1|Yellow fever virus strain Mauritania/Ro/HD47471/1987 envelope glycoprotein (E) gene, partial cds1306130613%0.080%GU073138.1Select seq gb|U52422.1|YFU52422Yellow fever virus Uga48 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1285128511%0.084%U52422.1Select seq gb|U52392.1|YFU52392Yellow fever virus Car77(883) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1269126911%0.083%U52392.1Select seq gb|DQ859067.1|Potiskum virus strain IBAN 10069 polyprotein gene, complete cds1191150863%0.066%DQ859067.1Select seq gb|AF369669.1|AF369669Yellow fever virus strain 14 FA polyprotein mRNA, partial cds115011506%0.098%AF369669.1Select seq gb|U52398.1|YFU52398Yellow fever virus Ecuador79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1137113711%0.081%U52398.1Select seq gb|U52416.1|YFU52416Yellow fever virus Trinidad54 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1133113311%0.081%U52416.1Select seq gb|DQ859062.1|Saboya virus strain Dak AR D4600 polyprotein gene, complete cds1124130065%0.065%DQ859062.1Select seq gb|U52404.1|YFU52404Yellow fever virus Panama74 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1115111511%0.081%U52404.1Select seq gb|U52389.1|YFU52389Yellow fever virus Brazil35 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1113111311%0.081%U52389.1Select seq gb|U52403.1|YFU52403Yellow fever virus Nigeria46 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1104110411%0.080%U52403.1Select seq gb|U52419.1|YFU52419Yellow fever virus Trinidad79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1079107911%0.080%U52419.1Select seq gb|U52410.1|YFU52410Yellow fever virus Peru95(153) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1074107411%0.080%U52410.1Select seq gb|U52409.1|YFU52409Yellow fever virus Peru95(149) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1072107211%0.080%U52409.1Select seq gb|U52413.1|YFU52413Yellow fever virus Senegal65 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1054105411%0.079%U52413.1Select seq gb|AF162449.1|AF162449Yellow fever virus isolate PER 1 envelope protein gene, partial cds9109109%0.080%AF162449.1Select seq gb|AF312554.1|AF312554Yellow fever virus glycoprotein E gene, partial cds9049049%0.080%AF312554.1Select seq gb|AF162451.1|AF162451Yellow fever virus isolate PER 3 envelope protein gene, partial cds9049049%0.080%AF162451.1Select seq gb|AF162452.1|AF162452Yellow fever virus isolate PER 4 envelope protein gene, partial cds9019019%0.080%AF162452.1Select seq gb|AF162450.1|AF162450Yellow fever virus isolate PER 2 envelope protein gene, partial cds8958959%0.080%AF162450.1Select seq gb|AF013417.1|AF013417Yellow fever virus strain TN-96 NS5 protein (NS5) gene, partial cds88188110%0.079%AF013417.1Select seq gb|U52424.1|YFU52424Yellow fever virus Uga48 non-structural protein 4A mRNA, partial cds8128127%0.084%U52424.1Select seq gb|AF369673.1|AF369673Yellow fever virus strain HB 1504 polyprotein mRNA, partial cds7857856%0.086%AF369673.1Select seq gb|AF369697.1|AF369697Yellow fever virus strain LSF 4 polyprotein mRNA, partial cds7717716%0.086%AF369697.1Select seq gb|AF369692.1|AF369692Yellow fever virus strain M 90-5 polyprotein mRNA, partial cds7677676%0.085%AF369692.1Select seq gb|AF369696.1|AF369696Yellow fever virus strain Z 19039 polyprotein mRNA, partial cds7627626%0.085%AF369696.1Select seq gb|AF369695.1|AF369695Yellow fever virus strain SE 7445 polyprotein mRNA, partial cds7627626%0.085%AF369695.1Select seq gb|DQ859057.1|Bouboui virus strain DAK AR B490 polyprotein gene, complete cds758155052%0.067%DQ859057.1Select seq gb|AF369676.1|AF369676Yellow fever virus strain BC 7914 polyprotein mRNA, partial cds7587586%0.085%AF369676.1Select seq gb|AY839631.1|Yellow fever virus strain HB1782/CAR86 polyprotein gene, partial cds7557556%0.085%AY839631.1Select seq gb|AF369694.1|AF369694Yellow fever virus strain A 709-4-A2 polyprotein mRNA, partial cds7497496%0.085%AF369694.1Select seq gb|AF369675.1|AF369675Yellow fever virus strain Couma polyprotein mRNA, partial cds7497496%0.085%AF369675.1Select seq gb|JX012100.1|Yellow fever virus isolate Ethiopia1966a polyprotein gene, partial cds7477476%0.085%JX012100.1Select seq gb|DQ859066.1|Jugra virus strain P-9-314 polyprotein gene, complete cds746132153%0.067%DQ859066.1Select seq gb|AF369674.1|AF369674Yellow fever virus strain Serie 227 polyprotein mRNA, partial cds7447446%0.085%AF369674.1Select seq gb|AF369672.1|AF369672Yellow fever virus strain ArB 17239 polyprotein mRNA, partial cds7447446%0.085%AF369672.1Select seq gb|JX012103.1|Yellow fever virus isolate Ethiopia1966d polyprotein gene, partial cds7427426%0.085%JX012103.1Select seq gb|JX012097.1|Yellow fever virus isolate Sudan2003 polyprotein gene, partial cds7407406%0.085%JX012097.1Select seq gb|U52394.1|YFU52394Yellow fever virus Car77(883) non-structural protein 4A mRNA, partial cds7377377%0.081%U52394.1Select seq gb|AY839633.1|Yellow fever virus strain ETH2777/Ethiopia61 polyprotein gene, partial cds7317316%0.085%AY839633.1Select seq gb|JX012099.1|Yellow fever virus isolate Ethiopia1961d polyprotein gene, partial cds7267266%0.085%JX012099.1Select seq gb|JX012098.1|Yellow fever virus isolate Ethiopia1961c polyprotein gene, partial cds7197196%0.085%JX012098.1Select seq gb|U52397.1|YFU52397Yellow fever virus Car77(900) non-structural protein 4A mRNA, partial cds7177177%0.081%U52397.1Select seq gb|AY540464.1|Yellow fever virus strain BeAr513008 polyprotein gene, partial cds7087086%0.083%AY540464.1Select seq gb|AY540477.1|Yellow fever virus strain 1345 polyprotein gene, partial cds7047046%0.083%AY540477.1Select seq gb|AY540467.1|Yellow fever virus strain BeAr513292 polyprotein gene, partial cds7047046%0.083%AY540467.1Select seq gb|AY540449.1|Yellow fever virus strain BeH203410 polyprotein gene, partial cds7047046%0.083%AY540449.1Select seq gb|AY540475.1|Yellow fever virus strain V528A polyprotein gene, partial cds6996996%0.083%AY540475.1Select seq gb|AY540473.1|Yellow fever virus strain "Tennessee" polyprotein gene, partial cds6996996%0.083%AY540473.1Select seq gb|AY540472.1|Yellow fever virus strain BeAr544276 polyprotein gene, partial cds6996996%0.083%AY540472.1Select seq gb|AY540466.1|Yellow fever virus strain BeAr513060 polyprotein gene, partial cds6996996%0.083%AY540466.1Select seq gb|AY540465.1|Yellow fever virus strain BeH512772 polyprotein gene, partial cds6996996%0.083%AY540465.1Select seq gb|AY540459.1|Yellow fever virus strain BeAr424083 polyprotein gene, partial cds6996996%0.083%AY540459.1Select seq gb|AY540455.1|Yellow fever virus strain BeH385780 polyprotein gene, partial cds6996996%0.083%AY540455.1Select seq gb|AY540452.1|Yellow fever virus strain BeAr233436 polyprotein gene, partial cds6996996%0.083%AY540452.1Select seq gb|AY540476.1|Yellow fever virus strain INS347613 polyprotein gene, partial cds6956956%0.083%AY540476.1Select seq gb|AY540470.1|Yellow fever virus strain BeAr527547 polyprotein gene, partial cds6956956%0.083%AY540470.1Select seq gb|AY540447.1|Yellow fever virus strain BeAr142658 polyprotein gene, partial cds6956956%0.083%AY540447.1Select seq gb|AY540436.1|Yellow fever virus strain BeAr628124 polyprotein gene, partial cds6906906%0.083%AY540436.1Select seq gb|DQ872411.1|Yellow fever virus strain GML902621 polyprotein gene, partial cds6906906%0.083%DQ872411.1Select seq gb|AY540481.1|Yellow fever virus strain CAREC797984 polyprotein gene, partial cds6906906%0.083%AY540481.1Select seq gb|AY540463.1|Yellow fever virus strain BeAr512943 polyprotein gene, partial cds6906906%0.083%AY540463.1Select seq gb|AY540462.1|Yellow fever virus strain BeAn510268 polyprotein gene, partial cds6906906%0.083%AY540462.1Select seq gb|AY540454.1|Yellow fever virus strain BeAr350397 polyprotein gene, partial cds6906906%0.083%AY540454.1Select seq gb|AY540453.1|Yellow fever virus strain BeH233393 polyprotein gene, partial cds6906906%0.083%AY540453.1Select seq gb|AY540450.1|Yellow fever virus strain BeAr233164 polyprotein gene, partial cds6906906%0.083%AY540450.1Select seq gb|AY540444.1|Yellow fever virus strain BeH107714 polyprotein gene, partial cds6906906%0.083%AY540444.1Select seq gb|DQ859056.1|Banzi virus strain SAH 336 polyprotein gene, complete cds688146461%0.066%DQ859056.1Select seq gb|AY540485.1|Yellow fever virus strain CAREC891957 polyprotein gene, partial cds6866866%0.083%AY540485.1Select seq gb|AY540484.1|Yellow fever virus strain CAREC891954 polyprotein gene, partial cds6866866%0.083%AY540484.1Select seq gb|AY540483.1|Yellow fever virus strain CAREC890692 polyprotein gene, partial cds6866866%0.083%AY540483.1Select seq gb|AY540482.1|Yellow fever virus strain CAREC889920 polyprotein gene, partial cds6866866%0.083%AY540482.1Select seq gb|AY540480.1|Yellow fever virus strain Jimenez polyprotein gene, partial cds6866866%0.083%AY540480.1Select seq gb|AY540460.1|Yellow fever virus strain BeAr511437 polyprotein gene, partial cds6866866%0.083%AY540460.1Select seq gb|AY540441.1|Yellow fever virus strain BeAn23536 polyprotein gene, partial cds6866866%0.083%AY540441.1Select seq gb|AY437135.1|Yellow fever virus polyprotein gene, partial cds6826826%0.083%AY437135.1Select seq gb|AY540487.1|Yellow fever virus strain P128MC polyprotein gene, partial cds6816816%0.083%AY540487.1Select seq gb|AY540479.1|Yellow fever virus strain 614819 polyprotein gene, partial cds6816816%0.083%AY540479.1Select seq gb|AY540468.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6816816%0.083%AY540468.1Select seq gb|AY540458.1|Yellow fever virus strain BeH425381 polyprotein gene, partial cds6816816%0.083%AY540458.1Select seq gb|AY540443.1|Yellow fever virus strain BeAr44824 polyprotein gene, partial cds6816816%0.083%AY540443.1Select seq gb|AY540442.1|Yellow fever virus strain BeAr46299 polyprotein gene, partial cds6816816%0.083%AY540442.1Select seq gb|L40951.1|FVVNS5PBanzi virus nonstructural protein 5 (NS5) gene, partial cds67967923%0.067%L40951.1Select seq gb|AY540488.1|Yellow fever virus strain PHO42H polyprotein gene, partial cds6776776%0.082%AY540488.1Select seq gb|AY540486.1|Yellow fever virus strain CAREC9515207 polyprotein gene, partial cds6776776%0.082%AY540486.1Select seq gb|AY540461.1|Yellow fever virus strain BeH511843 polyprotein gene, partial cds6776776%0.082%AY540461.1Select seq gb|AY540438.1|Yellow fever virus strain BeAN131 polyprotein gene, partial cds6776776%0.082%AY540438.1Select seq gb|FJ875520.1|Yellow fever virus strain SPAn289568 polyprotein gene, partial cds6726726%0.082%FJ875520.1Select seq gb|FJ875518.1|Yellow fever virus strain SPAn288183 polyprotein gene, partial cds6726726%0.082%FJ875518.1Select seq gb|EU303239.1|Yellow fever virus note H203410 nonstructural protein 5 (NS5) gene, partial cds6726727%0.079%EU303239.1Select seq gb|AY540469.1|Yellow fever virus strain BeAr527198 polyprotein gene, partial cds6726726%0.082%AY540469.1Select seq gb|AY540440.1|Yellow fever virus strain BeAr189 polyprotein gene, partial cds6726726%0.082%AY540440.1Select seq gb|AY540439.1|Yellow fever virus strain BeAr162 polyprotein gene, partial cds6726726%0.082%AY540439.1Select seq gb|HM582843.1|Yellow fever virus strain BeH613582 polyprotein gene, partial cds6686686%0.083%HM582843.1Select seq gb|FJ875517.1|Yellow fever virus strain SPH258595 polyprotein gene, partial cds6686686%0.082%FJ875517.1Select seq gb|AY540456.1|Yellow fever virus strain BeH379501 polyprotein gene, partial cds6686686%0.082%AY540456.1Select seq gb|AY540437.1|Yellow fever virus strain BeH111 polyprotein gene, partial cds6686686%0.082%AY540437.1Select seq gb|DQ859060.1|Edge Hill virus strain YMP 48 polyprotein gene, complete cds666142569%0.066%DQ859060.1Select seq gb|HM582848.1|Yellow fever virus strain BeAr631464 polyprotein gene, partial cds6646646%0.083%HM582848.1Select seq gb|AY540434.1|Yellow fever virus strain OBS8026 polyprotein gene, partial cds6636636%0.082%AY540434.1Select seq gb|HM582839.1|Yellow fever virus strain TVP11646 polyprotein gene, partial cds6616616%0.082%HM582839.1Select seq gb|HM582845.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6576576%0.082%HM582845.1Select seq gb|AY161928.1|Yellow fever virus strain 1368 polyprotein gene, partial cds6556556%0.082%AY161928.1Select seq gb|DQ859065.1|Uganda S virus polyprotein gene, complete cds654135665%0.066%DQ859065.1Select seq gb|AY540451.1|Yellow fever virus strain BeAn232869 polyprotein gene, partial cds6546546%0.082%AY540451.1Select seq gb|AY540490.1|Yellow fever virus strain 35708 polyprotein gene, partial cds6506506%0.081%AY540490.1Select seq gb|AY540474.1|Yellow fever virus strain INS382060 polyprotein gene, partial cds6506506%0.081%AY540474.1Select seq gb|HQ123568.1|Yellow fever virus strain PH71191 polyprotein gene, partial cds6466466%2e-18082%HQ123568.1Select seq gb|AY690831.1|Yellow fever virus strain SPU 160/03/23 polyprotein gene, partial cds6456455%8e-18085%AY690831.1Select seq gb|AY540457.1|Yellow fever virus strain BeH413820 polyprotein gene, partial cds6456456%8e-18081%AY540457.1Select seq gb|AY161951.1|Yellow fever virus strain OBS7904 polyprotein gene, partial cds6416416%9e-17981%AY161951.1Select seq gb|AY540445.1|Yellow fever virus strain BeAn142028 polyprotein gene, partial cds6416416%9e-17981%AY540445.1Select seq gb|AY540433.1|Yellow fever virus strain OBS7937 polyprotein gene, partial cds6416416%9e-17981%AY540433.1Select seq gb|AY540431.1|Yellow fever virus strain OBS7687 polyprotein gene, partial cds6416416%9e-17981%AY540431.1Select seq gb|AF369683.1|AF369683Yellow fever virus strain H117505 polyprotein mRNA, partial cds6416416%9e-17981%AF369683.1Select seq gb|AY161941.1|Yellow fever virus strain OBS2250 polyprotein gene, partial cds6366366%4e-17781%AY161941.1Select seq gb|AY161938.1|Yellow fever virus strain Cepa#2 polyprotein gene, partial cds6366366%4e-17781%AY161938.1Select seq gb|AY540432.1|Yellow fever virus strain OBS7549 polyprotein gene, partial cds6366366%4e-17781%AY540432.1Select seq gb|AF369685.1|AF369685Yellow fever virus strain 56205 polyprotein mRNA, partial cds6366366%4e-17781%AF369685.1Select seq gb|AF369678.1|AF369678Yellow fever virus strain T. Adeoye polyprotein mRNA, partial cds6366366%4e-17781%AF369678.1Select seq gb|AY161948.1|Yellow fever virus strain 03535098 polyprotein gene, partial cds6326326%5e-17681%AY161948.1Select seq gb|AY161939.1|Yellow fever virus strain Cepa#1 polyprotein gene, partial cds6326326%5e-17681%AY161939.1Select seq gb|AY161934.1|Yellow fever virus strain ARVO544 polyprotein gene, partial cds6326326%5e-17681%AY161934.1Select seq gb|AY540478.1|Yellow fever virus strain OBS5041 polyprotein gene, partial cds6326326%5e-17681%AY540478.1Select seq gb|AF369682.1|AF369682Yellow fever virus strain H117491 polyprotein mRNA, partial cds6326326%5e-17681%AF369682.1Select seq gb|AF369680.1|AF369680Yellow fever virus strain M. Adejumo polyprotein mRNA, partial cds6326326%5e-17681%AF369680.1Select seq gb|AF369681.1|AF369681Yellow fever virus strain A. Adeoye polyprotein mRNA, partial cds6276276%2e-17481%AF369681.1Select seq gb|AF369679.1|AF369679Yellow fever virus strain A. Jimo polyprotein mRNA, partial cds6276276%2e-17481%AF369679.1Select seq gb|HM582846.1|Yellow fever virus strain 15094 polyprotein gene, partial cds6256256%7e-17481%HM582846.1Select seq gb|AY161933.1|Yellow fever virus strain 1914 polyprotein gene, partial cds6256256%7e-17481%AY161933.1Select seq gb|AY161932.1|Yellow fever virus strain 1899/81 polyprotein gene, partial cds6256256%7e-17481%AY161932.1Select seq gb|DQ872412.1|Yellow fever virus strain CAREC788379 polyprotein gene, partial cds6236236%3e-17381%DQ872412.1Select seq gb|AY161947.1|Yellow fever virus strain OBS6530 polyprotein gene, partial cds6236236%3e-17381%AY161947.1Select seq gb|AY161945.1|Yellow fever virus strain OBS2243 polyprotein gene, partial cds6236236%3e-17381%AY161945.1Select seq gb|AY161944.1|Yellow fever virus strain HEB4246 polyprotein gene, partial cds6236236%3e-17381%AY161944.1Select seq gb|AF369684.1|AF369684Yellow fever virus strain BA 55 polyprotein mRNA, partial cds6236236%3e-17381%AF369684.1Select seq gb|AF369677.1|AF369677Yellow fever virus strain IB AR 45244 polyprotein mRNA, partial cds6236236%3e-17381%AF369677.1Select seq gb|KM388820.1|Yellow fever virus strain 3A polyprotein gene, partial cds6216216%9e-17381%KM388820.1Select seq gb|AY161930.1|Yellow fever virus strain 287/78 polyprotein gene, partial cds6196196%3e-17281%AY161930.1Select seq gb|AY161940.1|Yellow fever virus strain OBS2240 polyprotein gene, partial cds6186186%1e-17181%AY161940.1Select seq gb|AY161937.1|Yellow fever virus strain 149 polyprotein gene, partial cds6186186%1e-17181%AY161937.1Select seq gb|AY161935.1|Yellow fever virus strain HEB4224 polyprotein gene, partial cds6186186%1e-17181%AY161935.1Select seq gb|AY161931.1|Yellow fever virus strain R35740 polyprotein gene, partial cds6186186%1e-17181%AY161931.1Select seq gb|AY540446.1|Yellow fever virus strain BeH141816 polyprotein gene, partial cds6186186%1e-17180%AY540446.1Select seq gb|AY161943.1|Yellow fever virus strain HEB4245 polyprotein gene, partial cds6166166%4e-17180%AY161943.1Select seq gb|AY161936.1|Yellow fever virus strain HEB4236(153) polyprotein gene, partial cds6146146%1e-17080%AY161936.1Select seq gb|AY161927.1|Yellow fever virus strain 1362/77 polyprotein gene, partial cds6146146%1e-17080%AY161927.1Select seq gb|AF369689.1|AF369689Yellow fever virus strain SH 1339 polyprotein mRNA, partial cds6146146%1e-17080%AF369689.1Select seq gb|AF369688.1|AF369688Yellow fever virus strain SH 1464 polyprotein mRNA, partial cds6146146%1e-17080%AF369688.1Select seq gb|KM388819.1|Yellow fever virus strain 1A polyprotein gene, partial cds6126125%5e-17082%KM388819.1Select seq gb|AY161929.1|Yellow fever virus strain 1371 polyprotein gene, partial cds6106106%2e-16980%AY161929.1Select seq gb|HM582844.1|Yellow fever virus strain FMD1240 polyprotein gene, partial cds6096096%6e-16981%HM582844.1Select seq gb|AY161950.1|Yellow fever virus strain IQT5591 polyprotein gene, partial cds6096096%6e-16980%AY161950.1Select seq gb|AY161942.1|Yellow fever virus strain HEB4240 polyprotein gene, partial cds6096096%6e-16980%AY161942.1Select seq gb|AF369671.1|AF369671Yellow fever virus strain SH 28580 polyprotein mRNA, partial cds6096096%6e-16980%AF369671.1Select seq gb|AF369670.1|AF369670Yellow fever virus strain HD 38564 polyprotein mRNA, partial cds6096096%6e-16980%AF369670.1Select seq gb|AF369690.1|AF369690Yellow fever virus strain Dar Ar 276 polyprotein mRNA, partial cds6056056%7e-16880%AF369690.1Select seq gb|AF369687.1|AF369687Yellow fever virus strain SH1446 polyprotein mRNA, partial cds6056056%7e-16880%AF369687.1Select seq gb|U52402.1|YFU52402Yellow fever virus Nigeria46 non-structural protein 4A mRNA, partial cds6056057%7e-16878%U52402.1Select seq gb|HM582847.1|Yellow fever virus strain FVB0196 polyprotein gene, partial cds6036036%2e-16780%HM582847.1Select seq gb|AY839632.1|Yellow fever virus strain ArD76320/Senegal90 polyprotein gene, partial cds6016016%8e-16780%AY839632.1Select seq gb|AY161949.1|Yellow fever virus strain OBS6745 polyprotein gene, partial cds6006006%3e-16680%AY161949.1Select seq gb|AF369691.1|AF369691Yellow fever virus strain ArD93388 polyprotein gene, partial cds6006006%3e-16680%AF369691.1Select seq gb|AF369686.1|AF369686Yellow fever virus strain Jose Cachatra polyprotein mRNA, partial cds6006006%3e-16680%AF369686.1Select seq gb|KU308380.1|Bamaga virus isolate CY4270 polyprotein gene, complete cds594137857%1e-16465%KU308380.1Select seq gb|KM388823.1|Yellow fever virus strain 7A polyprotein gene, partial cds5925925%4e-16482%KM388823.1Select seq gb|U52415.1|YFU52415Yellow fever virus Senegal65 non-structural protein 4A mRNA, partial cds5875877%2e-16277%U52415.1
niman Posted June 18, 2016 Author Report Posted June 18, 2016 LOCUS KX027336 10823 bp RNA linear VRL 08-MAY-2016 DEFINITION Yellow fever virus isolate CIC4, complete genome. ACCESSION KX027336 VERSION KX027336.1 GI:1024994410 KEYWORDS . SOURCE Yellow fever virus (YFV) ORGANISM Yellow fever virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus; Yellow fever virus group. REFERENCE 1 (bases 1 to 10823) AUTHORS Cui,S., Wang,Q., Li,J., Chen,L., Li,X., Yang,P., Dou,X., Huo,D., Shi,W., Wu,S., Zhang,X., Zheng,Y., Liang,Z., Lyu,Y., Lu,G. and Du,Y. TITLE Direct Submission JOURNAL Submitted (06-APR-2016) Department of Infectious Disease and Endemic Disease Control, Beijing Center for Disease Prevetion and Control, 16 Hepingli Middle Street, Dongcheng District, Beijing 100013, China COMMENT ##Assembly-Data-START## Assembly Method :: Samtools v. v1.2 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10823 /organism="Yellow fever virus" /mol_type="genomic RNA" /isolate="CIC4" /isolation_source="urine" /host="Homo sapiens" /db_xref="taxon:11089" /country="China" /collection_date="19-Mar-2016" /note="HR0005-4; clinical-imported case 4" CDS 121..10359 /note="gp1" /codon_start=1 /product="polyprotein" /protein_id="ANC33492.1" /db_xref="GI:1024994411" /translation="MSGRKAQGRTLGVNMVRRGVRSLSNKIKQKTKQIGNRPGPSRGV QGFIFFFLFNILTGKKLTAHLKKLWRMLDPRQGLAVLRKVKRVVASLMRGLASRKRRS NEMAMVPLLLLGLLALSGGVTLVRKNRWLLLNVTAEDLGKTFSVGTGNCTTNILEAKY WCPDSMEYNCPNLSPREEPDDIDCWCYGVENVRVAYGRCDAVGRSKRSRRAIDLPTHE NHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQRVVIALL VLAVGPAYSAHCIGITDRDFIEGVHGGTWVSATLEQDKCVTVMAPDKPSLDISLQTVA IDGPAEARKVCYSAVLTHVKINDKCPSTGEAHLAEENDGDNACKRTYSDRGWGNGCGL FGKGSIVACAKFTCAKSMSLFEVDQTKIQYVIRAQLHVGAKQENWNTDIKTLKFDALS GSQEAEFTGYGKATLECQVQTAVDFGNSYIAEMEKDSWIVDRQWAQDLTLPWQSGSGG IWREMHHLVEFEPPHAATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHV SCRVKLSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADD LTAAVNKGILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIG KLFTQTMKGAERLAVMGDAAWDFSSAGGFFTSVGKGIHTVFGSAFQGLFGGLSWITKV IMGAVLIWVGINTRNMTMSMSMILVGVIMMFLSLGVGADQGCAVNFGKRELKCGDGIF VFRDSDDWLTKYSYYPEDPVKLASIIKASHEEGKCGLNSVDSLEHEMWRSRADEINAI FEENEVDISVVVQDPKNIYQRGTQPFSRIRDGLQYGWKTWGKNLVFSPGRKNGSFIID GKSRKECPFSNRVWNSFQIEEFGMGVFTTRVFMDATFDYSVDCDGAILGAAVNGKKSA HGSPTFWMGSHEVNGTWMTHTLETLDYKECEWPLTHTIGTSVEESDMFMPRSIGGPVS SHNRIPGYKVQTNGPWMQVPLEVKREVCPGTSVVVDSNCDGRGKSTRSTTDSGKIIPE WCCRSCTMPPVSFHGSDGCWYPMEIRPMKTSDSHLVRSWVTAGEVHAVPFGLVSMMIA MEVVLRRRQGPKQMLVGGVVLLGAMLVGQVTVLDLVKFVVAVGLHFHEINNGGDAMYM ALIASFSIRPGLLMGFGLRTLWSPRERLVMAFGAAMVEIALGGMMGGLWQYLNAVSLC VLTINAISSRKASNMILPLMALMTPMTMHEVRMATMLFCTVVIIGVLHQNSKDTSMQK TIPIVALTLTSYMGLTQPFLGLCAYMSTQVFGRRSIPVNEALAAAGLVGVLAGLAFQD MENFLGPIAVGGILMMLVSVAGRVDGLELRKLGEISWEEEAEISGSSSRYDVALSEQG EFKLLSEDKVPWDQIVMTSLALVGAAIHPFALLLVLGGWILHIKGARRSGDVLWDIPT PKVIEECEHLEDGIYGIFQSTFLGASQRGVGVAQGGVFHTMWHVTRGAFLLRNGKKLV PSWASVKEDLVAYGGSWKLDGRWDGEEEVQLIAAVPGKSVVNVQTKPSLFKVKNGGEI GAVALDYPSGTSGSPIVNRNGEVVGLYGNGILVGDNSFVSAISQTELKEESKEELQEI PTMLKKGMTTILDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFQG LDVKFHTQAFSAHGSGKEVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIA ARGWAAHRARANESATILMTATPPGTSDEFPHSNGEIEDVQTDIPSEPWTTGHEWILA DKRPTAWFLPSIRAANVMAASLRKAGKNVVVLNRKTFEKEYPTIKQKKPDFILATDIA EMGANLCVERVLDCRTAYKPVLVDEGKKVAIKGPLRISASSAAQRRGRIGRNPNRDGD SYYYSEPTSEDNAHHVCWLEASMLLDNMEVRGGMVAPLYGIEGTKTPVSPGEMRLRDD QRRVFRELVRGCDLPVWLAWQVAKAGLKTNDRKWCFEGPEEHEILNDNGETVKCRSPG GAKRALRPRWCDERVSSDQSALADFIKFAEGRRGAAEMLVILTELPDFLAKKGGEAMD TISVFLHSEEGSRAYRNALSMMPEAMTIVMLFLLAGLLTSGAVIFFMSPKGMSRMSMA MGTMAGSGYLMFLGGVKPTHISYVMLIFFVLMVVIIPEPGQQRSIQDNQVAYLIIGIL TLLSVVAANELGMLEKTKEDFFGKRDITTPSGAIPWSWPDLDLKPGAAWTVYVGIVTM LSPMLHHWIKVEYGNLSLSGIAQSASVLSFMDKGIPFMKMNISVVILLVSGWNSITVI PLLCGIGGAMLHWTLKLPGIKAQQSKLAQKRVFHGVAKNPVVDGNPTADIEEAPEMPA LYEKKLALYLLLALSLMSVAMCRTPFSLAEGIVLSSAALGPLIEGNTSLLWNGPMAVS MTGVMRGNYYAFVGVMYNLWKMKTERRGSASGKTLGEVWKRELNLLDKQQFEMYKRTD IIEVDRDMARRHLAEGKVDTGVAVSRGTAKLRWFHERGYVKLEGRVTDLGCGRGGWCY YAAAQKEVSGVKGYTLGRDGHEKPMNVQSLGWNIVTFKDKTDIHRLEPLKCETLLCDI GESSPSSATEGERTLRVLDTVEKWLACGVDNFCIKVLAPYMPDVIEKLELLQRRFGGT VIRNPLSRNSTHEMYYVSGARSNITFTVNQTSRLLMRRMRRPTGKVTLEADVILPIGT RSVETDKGPLDKDAIEERVERIKNEYATTWFYDNDNPYRTWHYCGSYVTKTSGSAASM INGVIKILTFPWDRIEEVTRMAMTDTTPFGQQRVFKEKVDTRAKDPPAGTRKIMKVVN RWLFRHLSREKNPRLCTKEEFIAKVRSHAAVGAFLEEQEQWKTANEAVLDPKFWEMVD AERKLHQQGRCQSCVYNMMGKREKKLSEFGKAKGSRAIWYMWLGARFLEFEALGFLNE DHWASRENSGGGVEGIGLQYLGYVIRDLSTKEGGGFYADDTAGWDTRITEADLDDEQE IMSYMSPEQRKLAWAIMEMTYKNKVVKVLRPAPGGKAFMDIISRRDQRGSGQVVTYAL NTITNLKVQLIRMAEAEMVINHQHVQECGENVLERLETWLAENGCDRLSRMAVSGDDC VVRPVDDRFGLALSHLNAMSKVRKDISEWQPSKGWTDWENVPFCSHHFHELVLKDGRK IVVPCRDQDELIGRGRVSPGNGWMIKETACLSKAYANMWSLMYFHKRDMRLLSFAVSS AVPTAWVPSGRTTWSVHGRGEWMTTEDMLDVWNRVWVLNNPHMTDKTTIKEWRDVPYL TKRQDKLCGSLIGMTNRATWASHIHLVIHRIRTLIGQEKFTDYLTVMDRYSVDADLQP GELI" ORIGIN 1 agtaaatccc tgggtgctaa ttgaggtgca ttggtctgca aatcgagttg ctaggcaata 61 aacacatttg gattaatttt aatcgttcgt tgagcgatta gcagagaact gaccagagaa 121 atgtctggtc gaaaagctca gggtagaacc ctgggcgtca atatggtaag acgaggggtt 181 cgctccttgt caaacaaaat aaaacaaaaa acaaaacaga ttggaaacag acctggccct 241 tcaagaggtg ttcaaggatt tattttcttc tttttgttta acattctgac tgggaaaaag 301 ttgactgctc atctaaaaaa actctggagg atgcttgatc caaggcaggg gcttgctgta 361 ctgcgaaagg tcaaaagagt tgtagctagc ttaatgagag ggctggcttc caggaaacgt 421 agatccaatg aaatggccat ggtaccactc ctgttactgg gtttgttggc tctatcagga 481 ggagtgaccc tcgtcagaaa gaacagatgg ttgctcctga atgtaactgc tgaagacctg 541 gggaaaacgt tttcagtggg aactgggaat tgcaccacga atattctgga agcaaaatac 601 tggtgccccg actcaatgga atacaattgc cccaatctca gtccaagaga agagccagat 661 gacatagatt gctggtgtta tggagtggaa aatgtcagag tggcctatgg aagatgtgat 721 gcggtagggc gatcaaaacg ctccaggaga gcgattgatc tacccacaca tgagaaccat 781 ggactaaaga ctcggcagga gaagtggatg acaggcagaa tgggtgagag gcagctccag 841 aagattgaaa gatggctggt taggaatcca ttttttgcgg tcacagcatt ggcaatagcc 901 tatctggtgg gtaacaacac gacacaacga gtggtcatag cactactggt tctagcggtt 961 ggtccagcgt actctgccca ttgcataggg ataaccgaca gagatttcat tgaaggtgtc 1021 catgggggca cttgggtgtc agccactctg gagcaggaca aatgcgtgac tgtaatggcc 1081 cctgacaaac cttctctgga catctcacta caaacagtgg caatcgatgg accggctgaa 1141 gcgaggaagg tttgctacag tgcagtccta acccatgtga agatcaatga caaatgcccg 1201 agcactggtg aggcccacct tgcagaggaa aatgatggtg acaatgcttg taaacggaca 1261 tattctgaca gaggctgggg caatggctgt ggtctttttg ggaaaggaag catcgtggct 1321 tgtgccaagt ttacatgtgc caaatctatg agtctctttg aggtggatca gaccaaaatc 1381 caatatgtca tcagggccca gctccatgtg ggtgctaaac aggaaaactg gaacacagac 1441 ataaaaacgc tgaaatttga tgctctttct ggctcacagg aggctgaatt cactggttat 1501 ggaaaggcaa cactagagtg tcaggtccag actgccgtgg actttgggaa cagctacatc 1561 gcagagatgg aaaaagatag ctggatcgtt gaccgccaat gggcacagga cttgacactg 1621 ccatggcaga gtgggagtgg tggcatatgg agagaaatgc accaccttgt tgagtttgag 1681 cccccacatg ctgccacaat tagggtgctg gccttgggca atcaagaagg ctccttgaag 1741 accgctctca caggcgctat gcgcgtcacc aaggatgaga atgacaacaa cttgtacaaa 1801 ctgcacggtg gtcacgtctc ctgtagagtg aaactgtcag ccctcactct caaaggaaca 1861 tcctacaaga tgtgcacaga taaaatgtca tttgtcaaga atccaacgga tacagggcat 1921 ggcacagttg tcatgcaagt aaaggtcccc aaaggggccc catgcaagat tcccgtgatt 1981 gtggcagatg acctaacggc agcagtgaac aaaggcatct tggtcactgt caatcctatt 2041 gcatccacaa atgatgatga agttctgatt gaggtcaatc ccccttttgg ggatagctac 2101 atcatagttg ggactggaga ctcacgactg acctatcagt ggcacaaaga agggagttca 2161 ataggaaaat tgttcacaca gacaatgaaa ggagctgaac gtcttgcagt gatgggtgat 2221 gctgcttggg attttagttc tgctgggggg ttcttcacat ctgtgggaaa aggaatccat 2281 accgtgtttg gctcggcctt ccaggggctg tttggtggct tgagttggat cacgaaagtc 2341 atcatgggag ccgtgctcat ctgggtggga ataaacaccc gcaacatgac catgtccatg 2401 tccatgatct tggtaggtgt gatcatgatg tttctttcac taggagttgg ggctgaccaa 2461 ggatgtgctg ttaactttgg gaaacgcgag ctcaaatgcg gagatggcat ctttgtgttt 2521 agagactctg atgactggct cacaaagtac tcatactatc ctgaagaccc tgtcaaattg 2581 gcatccatca ttaaagcctc ccacgaggag ggcaaatgtg gattgaattc agttgattcc 2641 ctcgaacacg agatgtggag gagtagggcg gatgagatca acgccatttt tgaagaaaat 2701 gaagtagaca tctcggtcgt cgtccaagac ccaaagaaca tctaccaaag agggacccaa 2761 ccgttctcaa ggatccgtga cggattgcag tatggatgga agacttgggg aaaaaacctt 2821 gttttctcac cagggaggaa gaacggcagc ttcatcattg acgggaagtc acgaaaggag 2881 tgccccttct ctaacagagt gtggaactca ttccagattg aggagtttgg catgggggtc 2941 ttcacaacac gagtgtttat ggacgcgacc tttgactatt cagtggactg tgatggagcc 3001 atcctgggtg cagcggtgaa tggaaagaag agtgcccatg gatcacccac attttggatg 3061 ggaagtcatg aagtcaatgg aacgtggatg acacacactt tggaaactct tgattacaag 3121 gagtgtgaat ggccactgac acacactatt ggaacctcag tagaagaaag tgacatgttc 3181 atgccccggt ccattggagg tccggtgagt tctcacaacc gcatcccggg ttacaaggtg 3241 caaaccaatg ggccatggat gcaagtcccc ctggaagtaa aaagggaagt ctgtccaggg 3301 acaagcgtgg tggtggactc caactgtgat ggacgtggaa aatcaacgag atcaaccact 3361 gacagtggga aaataatccc ggaatggtgt tgcagatctt gtactatgcc tccagtcagc 3421 ttccatggaa gcgatggttg ttggtatcct atggagatca gacccatgaa aacatccgac 3481 agccacctag tgagatcctg ggtgactgca ggagaagttc atgcagtacc ctttggactg 3541 gtgagcatga tgattgccat ggaggtggtg ttgcgcagaa ggcaaggacc aaaacaaatg 3601 ctggtaggag gagttgtgct gcttggagcg atgttagtgg gacaagtcac agtcttagac 3661 cttgtgaagt ttgttgtggc agtgggattg cacttccatg aaattaataa cggaggagat 3721 gccatgtaca tggcattgat tgccagcttt tccatccggc caggcctgct catgggcttt 3781 gggctgcgca cactgtggag tcctcgcgag cgacttgtaa tggcatttgg agcagccatg 3841 gttgagattg ccttaggtgg aatgatgggt gggctttggc agtacttgaa cgccgtttca 3901 ctgtgtgtgc tcaccataaa tgcaatctca tcaaggaagg cctcaaatat gatcctcccc 3961 ctgatggcac tcatgactcc catgacaatg catgaggtga ggatggcgac gatgctgttc 4021 tgcactgttg tcataatagg ggtgcttcat cagaattcaa aagacacatc tatgcaaaag 4081 accattccca ttgtagccct gacactgacc tcatacatgg gcttgaccca gccctttcta 4141 gggctgtgtg catacatgtc cacgcaggtg tttggcagaa ggagtatacc tgtgaatgaa 4201 gccttggcag cggctggctt ggtgggagtg ctagcagggc tagccttcca agacatggaa 4261 aactttttgg gtccaatagc ggtggggggg atcctcatga tgctagttag tgtggcaggg 4321 agagttgatg gactagagct caggaaactt ggtgaaatct cctgggaaga agaagctgaa 4381 ataagtggaa gctctagccg ctatgatgtg gcactcagtg agcagggtga atttaaactc 4441 ctctcagagg acaaagtgcc ctgggaccag atagtaatga catccctagc cctcgtggga 4501 gcagccatac atccatttgc cctcttgctg gtcttgggag gatggatcct gcacattaaa 4561 ggtgctagga ggagtgggga tgttctttgg gacattccta cgccaaaggt gattgaggaa 4621 tgtgagcacc tggaggatgg gatctatggc atatttcagt caaccttcct tggagcctcg 4681 cagcgaggtg ttggagtggc gcagggaggg gtcttccaca caatgtggca tgtcactagg 4741 ggggcattcc tcttgaggaa tggaaagaaa ctggttccgt cttgggcttc tgtgaaggag 4801 gatctggtgg cttatggtgg ttcctggaaa ctagacggga gatgggatgg tgaggaggaa 4861 gtccaactca tcgctgctgt gcctggaaaa tctgttgtca acgttcaaac aaaaccaagc 4921 ttgttcaaag tgaaaaatgg tggtgagatt ggagcagttg ctctagacta ccccagtgga 4981 acctcaggct cccccattgt gaaccgaaat ggtgaagtgg ttgggctcta tggcaatgga 5041 attctggtgg gtgataactc ctttgtgtct gccatctcac aaactgaatt gaaggaagaa 5101 tccaaagaag aactgcaaga aataccaact atgctgaaaa aaggaatgac caccatcctt 5161 gacttccacc ctggggcggg gaaaacccgt aggttcctgc ctcaaatatt ggcggagtgt 5221 gccagaaggc gtttgcgcac tctggtatta gcacccacca gggttgtttt gtcagagatg 5281 aaagaagctt ttcaggggtt ggatgtgaaa ttccacacac aagctttctc agcccatggg 5341 agtgggaagg aggtcattga cgcaatgtgc catgcaaccc ttacatatag aatgctggaa 5401 ccaacaaggg tagtcaactg ggaggtcatt attatggatg aggcgcactt tctggatcct 5461 gctagcatag cagcgagagg ctgggcggct catagagcaa gagcaaatga gagcgccacc 5521 atacttatga ccgccacccc accaggcacc agtgacgaat tccctcactc caatggtgag 5581 attgaggacg tccagactga catccccagc gagccatgga ccacaggaca tgaatggatc 5641 ttggcggaca agcgcccaac tgcatggttc cttccatcga tcagagcagc aaatgtcatg 5701 gcagcctcgc tgcggaaagc gggaaaaaat gtggtggtac tgaataggaa aacctttgaa 5761 aaggagtacc ccaccattaa gcagaagaaa ccggatttca tccttgccac cgatatcgct 5821 gagatgggag caaacttgtg tgtggagaga gtcttggact gcagaactgc ctacaagcct 5881 gtcctggttg atgaagggaa gaaggtggct atcaaagggc cgctacgaat ctcagcgtca 5941 tcggccgctc agaggagagg acgcattgga cgcaatccca acagagatgg tgactcttac 6001 tactactcag aacctaccag tgaggacaat gcacaccatg tgtgctggct ggaggcttcc 6061 atgctcctgg ataacatgga ggttagaggg gggatggttg ctccacttta tggcattgag 6121 ggaacaaaga ctcccgtctc tccaggagaa atgaggctaa gagatgatca gagaagggtc 6181 tttagagagt tggtgcgagg gtgtgatttg ccagtgtggt tggcatggca agtggcaaaa 6241 gccggcctga agaccaatga ccgcaaatgg tgttttgagg gtcccgaaga gcatgaaata 6301 ctcaatgaca atggtgaaac agtaaagtgt agatctccgg gcggagcaaa aagagcattg 6361 agacctagat ggtgtgacga gagagtttcc tcagaccaga gtgccttggc tgacttcatt 6421 aagtttgcag aaggtagaag aggggctgct gagatgcttg tgatcctcac ggagttgccc 6481 gacttcctgg caaagaaggg tggggaagcc atggatacca tcagtgtgtt cctacattct 6541 gaagagggtt caagagcgta cagaaatgcc ctgtcaatga tgccagaagc catgaccatt 6601 gtcatgctct tcctgcttgc cggactcttg acctcaggag cggtgatttt cttcatgtcg 6661 ccaaaaggca tgagtagaat gtcaatggca atgggtacca tggctggcag tggatatctc 6721 atgtttctgg ggggagtaaa accaacccac atctcttacg tcatgttaat attctttgtc 6781 ctcatggtcg tcataattcc cgaaccagga cagcagagat caatccagga taaccaagtt 6841 gcctacctca taattgggat cttgacattg ttatcagttg tggcagctaa tgaactaggg 6901 atgctggaga agaccaagga agattttttt ggaaagagag acatcacaac accaagtggg 6961 gcaatcccat ggagttggcc tgacctggat ctgaaacctg gggcggcctg gacagtctat 7021 gtgggaatcg tgacgatgtt gtctcccatg ttacaccatt ggataaaagt tgagtatggc 7081 aatttgtcac tatcgggaat agcccaatct gcctcagttc tttcatttat ggacaaagga 7141 attcccttca tgaaaatgaa tatatctgtg gtcatacttt tggtcagtgg ctggaattca 7201 atcacagtga tccctctttt gtgcggcatt ggtggagcca tgctgcactg gacgctcaaa 7261 cttcctggga ttaaagccca gcaatcaaag ctggctcaaa aaagagtttt tcatggagtg 7321 gcaaaaaatc cagttgttga tggtaatcca actgctgaca ttgaggaagc cccagaaatg 7381 ccagctttat atgaaaagaa gctggctctt tacctccttc tggccctaag cctcatgtca 7441 gttgccatgt gcagaacccc tttttcctta gcggaaggaa tagtattgtc atctgccgcc 7501 cttggacctc tcattgaggg gaacactagt ctgttgtgga atggcccaat ggccgtttcc 7561 atgactggag tcatgcgtgg caactactat gcttttgtgg gagtcatgta caatctctgg 7621 aaaatgaaaa cagagcgtag agggagtgca agtggaaaaa cattgggtga ggtctggaag 7681 cgtgaactca acttgctaga caaacaacaa tttgaaatgt acaaaagaac agacatcatt 7741 gaggtggacc gagacatggc acgacgacac ttggcagagg gaaaggtgga cacgggagtg 7801 gccgtgtcga gagggactgc aaagctgaga tggttccacg agcgtggcta tgtgaagcta 7861 gaaggaaggg tcaccgatct tgggtgtgga cgtggaggct ggtgctacta tgcagcagct 7921 caaaaagaag ttagtggtgt gaaggggtat acccttggca gagatggcca tgagaaacct 7981 atgaatgtcc aaagcttggg atggaatatt gtgactttta aggacaagac tgatattcac 8041 cgactggagc cactcaagtg tgaaactctc ctctgtgaca tcggagaatc gtccccatcc 8101 tccgcaactg agggtgagag gaccttaaga gttctggaca cagttgaaaa gtggttggct 8161 tgtggagtgg ataacttttg catcaaagtt ctggcaccat acatgcccga tgtgatagag 8221 aaactggagc ttcttcaaag aagattcggt ggaaccgtca tcaggaatcc tctgtccaga 8281 aattctactc atgaaatgta ctacgtttca ggagcaagaa gtaacatcac attcacagtt 8341 aaccagacat cacgcctgct gatgcgaagg atgaggcggc ccacaggcaa agttaccttg 8401 gaagctgatg tcattcttcc gataggcacg cgcagtgtgg aaactgataa aggcccattg 8461 gataaggatg ctattgagga aagagttgag aggatcaaga atgaatatgc cactacatgg 8521 ttctatgaca atgacaaccc gtatagaacg tggcattatt gtggctccta tgtgaccaaa 8581 acgtcaggaa gtgcagccag catgataaat ggagtcatca aaatcctgac ttttccatgg 8641 gacaggatag aagaagtcac aagaatggca atgactgaca ccacaccttt tggacaacaa 8701 agagttttca aggagaaagt agacacaaga gcaaaagacc ctcctgctgg aacaaggaag 8761 atcatgaagg tggtgaatag atggttgttt cggcatctgt ccagggagaa gaaccccagg 8821 ttgtgcacca aagaagaatt cattgccaaa gtacggagcc atgcagcagt gggggctttt 8881 ctagaggaac aagagcagtg gaaaacggcc aatgaggcag tccttgatcc aaagttttgg 8941 gaaatggtcg atgcagaacg caaacttcat cagcaggggc gatgccaatc ctgtgtgtac 9001 aacatgatgg gaaagaggga aaagaaactc tctgaatttg gaaaggccaa agggagccgt 9061 gctatctggt acatgtggct tggggcacgg ttccttgagt ttgaagctct tgggttttta 9121 aatgaagatc actgggcctc ccgggagaac tcggggggag gagttgaggg cataggactc 9181 cagtacttgg gctatgttat cagggacttg tcaaccaaag aaggtggagg gttttatgcg 9241 gatgacacgg cagggtggga cacacgcatc acagaagctg acctggatga cgagcaagag 9301 atcatgagtt acatgagccc tgaacaaagg aagctggcct gggctataat ggaaatgaca 9361 tacaagaaca aagtggttaa ggtgctgagg ccagccccag gaggcaaggc cttcatggac 9421 atcatcagcc ggagagacca aagggggtca ggacaagttg tgacatacgc cctcaacacc 9481 ataaccaatc taaaagtcca gctcataaga atggctgaag ctgaaatggt gatcaaccat 9541 cagcatgtgc aggagtgtgg tgaaaatgtc ttagagcggc ttgaaacttg gcttgctgaa 9601 aacggatgtg acagattgag ccgaatggct gtgagtgggg atgattgtgt tgtgagaccg 9661 gtggatgaca gatttggcct ggccctttcc catcttaatg caatgtccaa agttaggaag 9721 gacatttcag aatggcaacc ctccaaagga tggacagatt gggaaaatgt tcctttctgc 9781 tctcaccact tccatgaact ggtgttgaaa gatgggagga agatagtggt gccttgcaga 9841 gatcaagatg aactgatagg gagagggaga gtgtccccag gaaatggctg gatgatcaag 9901 gaaacagcct gcctcagcaa agcttacgca aacatgtggt cactgatgta ctttcacaag 9961 agggacatga ggctactttc attcgctgtc tcctccgctg ttccaacggc ctgggtgccc 10021 agtggaagga caacgtggtc tgtccacgga agaggggagt ggatgacaac tgaggacatg 10081 ctagatgtct ggaacagggt gtgggtgttg aataacccgc acatgacgga caaaacaacc 10141 atcaaggagt ggagagatgt tccctacctc acaaagagac aggataagct ttgcgggtca 10201 ctgataggaa tgacaaacag ggccacatgg gcatctcaca tccaccttgt gatccaccgg 10261 atcagaactc taataggtca agagaagttc acagactacc tcaccgtcat ggacaggtat 10321 tctgttgatg ccgaccttca gccaggagag cttatctgag acattacaac atggaaaacc 10381 gggataaaaa ctacgggtgg agaaccggac tccccacttg agaaatgtaa ataagaaacc 10441 gggataaaaa caacggatgg agaaccggac tccacactga ataggttata aacgtcagcc 10501 caggatccaa aatttgaatg ggtcttgcca ccgctaagct gtgaggcggt gcgggctggg 10561 acagccgttt cccgggcaac gacatgcctg gtttctggga cttcccaacc cggagtaaaa 10621 tgaaggagcc tccgccacca ccctcccacg gggtgttgga aagatggggt ctagaggtta 10681 gaggagaccc tccagggaaa ttagtgggac catattgacg ccagggaaag accggagtgg 10741 ttctctgctt ttcctccagg ggtctgcgag cacagtttgc tctagaagaa gcagaccttt 10801 ggatgacaaa acacaaaacc act
niman Posted June 18, 2016 Author Report Posted June 18, 2016 Sequences producing significant alignments:Select:AllNone Selected:0AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignmentsSequences producing significant alignments:Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccessionSelect seq gb|KX027336.1|Yellow fever virus isolate CIC4, complete genome1846518465100%0.0100%KX027336.1Select seq gb|KX010995.1|Yellow fever virus isolate CIC2, complete genome1833018330100%0.099%KX010995.1Select seq gb|KX010996.1|Yellow fever virus isolate CIC3, complete genome1831418314100%0.099%KX010996.1Select seq gb|KX010994.1|Yellow fever virus isolate CIC1, complete genome1800618006100%0.099%KX010994.1Select seq gb|AY968064.1|Yellow fever virus strain Angola71, complete genome1768517685100%0.098%AY968064.1Select seq gb|DQ235229.1|Yellow fever virus strain Couma, complete genome1133511335100%0.085%DQ235229.1Select seq gb|AY968065.1|Yellow fever virus strain Uganda48a, complete genome1133511335100%0.085%AY968065.1Select seq gb|JN620362.1|Yellow fever virus strain Uganda 2010, complete genome1127911279100%0.084%JN620362.1Select seq gb|JF912185.1|Yellow fever virus strain BeAR513008, complete genome87658765100%0.079%JF912185.1Select seq gb|JF912179.1|Yellow fever virus strain BeAR378600, complete genome87638763100%0.079%JF912179.1Select seq gb|AY603338.1|Yellow fever virus strain Ivory Coast 1999, complete genome87608760100%0.079%AY603338.1Select seq gb|AY572535.1|Yellow fever virus strain Gambia 2001, complete genome87428742100%0.079%AY572535.1Select seq gb|JX898875.1|Yellow fever virus isolate ArD149815 from Senegal, complete genome87358735100%0.079%JX898875.1Select seq gb|JX898873.1|Yellow fever virus isolate ArD149214 from Senegal, complete genome87358735100%0.079%JX898873.1Select seq gb|JX898874.1|Yellow fever virus isolate ArD149194 from Senegal, complete genome87318731100%0.079%JX898874.1Select seq gb|JF912186.1|Yellow fever virus strain BeH526722, complete genome87318731100%0.079%JF912186.1Select seq gb|JX898868.1|Yellow fever virus isolate HD117294 from Senegal, complete genome87278727100%0.079%JX898868.1Select seq gb|JF912184.1|Yellow fever virus strain BeH463676, complete genome87248724100%0.079%JF912184.1Select seq gb|JF912183.1|Yellow fever virus strain BeH423602, complete genome87168716100%0.079%JF912183.1Select seq gb|KM388817.1|Yellow fever virus strain 2A polyprotein gene, complete cds87118711100%0.079%KM388817.1Select seq gb|JX898880.1|Yellow fever virus isolate ArD181564 from Senegal, complete genome87048704100%0.079%JX898880.1Select seq gb|KM388816.1|Yellow fever virus strain 10A polyprotein gene, complete cds87028702100%0.079%KM388816.1Select seq gb|JX898878.1|Yellow fever virus isolate ArD181250 from Senegal, complete genome87028702100%0.079%JX898878.1Select seq gb|JX898877.1|Yellow fever virus isolate ArD181464 from Senegal, complete genome87028702100%0.079%JX898877.1Select seq gb|JX898870.1|Yellow fever virus isolate ArD121040 from Senegal, complete genome86978697100%0.079%JX898870.1Select seq gb|JF912187.1|Yellow fever virus strain BeH622205, complete genome86938693100%0.079%JF912187.1Select seq gb|JF912188.1|Yellow fever virus strain BeH622493, complete genome86898689100%0.079%JF912188.1Select seq gb|JX898876.1|Yellow fever virus isolate ArD156468 from Senegal, complete genome86848684100%0.079%JX898876.1Select seq gb|JF912180.1|Yellow fever virus strain BeH394880, complete genome86808680100%0.079%JF912180.1Select seq gb|JF912189.1|Yellow fever virus strain BeAR646536, complete genome86538653100%0.079%JF912189.1Select seq gb|JF912182.1|Yellow fever virus strain BeH422973, complete genome86538653100%0.079%JF912182.1Select seq gb|JF912190.1|Yellow fever virus strain BeH655417, complete genome86488648100%0.079%JF912190.1Select seq gb|AY640589.1|Yellow fever virus strain ASIBI, complete genome86438643100%0.079%AY640589.1Select seq gb|HM582851.1|Yellow fever virus strain TVP11767 polyprotein gene, complete cds86398639100%0.079%HM582851.1Select seq gb|KF769016.1|Yellow fever virus strain Asibi, complete genome86378637100%0.079%KF769016.1Select seq gb|JX898869.1|Yellow fever virus isolate DakArAmt7 from Cote d'Ivoire, complete genome86348634100%0.079%JX898869.1Select seq gb|KM388815.1|Yellow fever virus strain 9A polyprotein gene, complete cds86308630100%0.079%KM388815.1Select seq gb|KM388814.1|Yellow fever virus strain 6A polyprotein gene, complete cds86308630100%0.079%KM388814.1Select seq gb|KM388818.1|Yellow fever virus strain 8A polyprotein gene, complete cds85888588100%0.079%KM388818.1Select seq gb|U21056.1|YFU21056Yellow fever virus French viscerotropic strain, complete genome85708570100%0.079%U21056.1Select seq gb|KF907504.1|Yellow fever virus strain 88/1999, complete genome85638563100%0.079%KF907504.1Select seq gb|JX898872.1|Yellow fever virus isolate ArD114972 from Senegal, complete genome85458545100%0.079%JX898872.1Select seq gb|JX898871.1|Yellow fever virus isolate ArD114896 from Senegal, complete genome85388538100%0.079%JX898871.1Select seq gb|DQ100292.1|Yellow fever virus strain 17DD-Brazil, complete genome85348534100%0.079%DQ100292.1Select seq gb|U21055.1|YFU21055Yellow fever virus French neurotropic strain, complete genome85258525100%0.078%U21055.1Select seq gb|U17066.1|YFU17066Yellow fever virus vaccine strain 17DD, complete genome85168516100%0.078%U17066.1Select seq gb|GQ379162.1|Yellow fever virus strain case #1, complete genome85148514100%0.078%GQ379162.1Select seq emb|X03700.1|Yellow fever virus complete genome, 17D vaccine strain85118511100%0.078%X03700.1Select seq gb|KF769015.1|Yellow fever virus strain 17D-204, complete genome85078507100%0.078%KF769015.1Select seq gb|JN811143.1|Yellow fever virus 17D YF-VAX Vero adapted Series C P11, complete genome85078507100%0.078%JN811143.1Select seq gb|JX503529.1|Yellow fever virus strain YF/Vaccine/USA/Sanofi-Pasteur-17D-204/UF795AA/YFVax, complete genome85078507100%0.078%JX503529.1Select seq gb|JN628279.1|Yellow fever virus strain 17D RKI, complete genome85078507100%0.078%JN628279.1Select seq gb|AF052444.1|AF052444Yellow fever virus clone HONG8 polyprotein gene, complete cds85078507100%0.078%AF052444.1Select seq gb|JX949181.1|Yellow fever virus strain 17D polyprotein gene, complete cds85028502100%0.078%JX949181.1Select seq gb|GQ379163.1|Yellow fever virus strain case #2, complete genome85028502100%0.078%GQ379163.1Select seq gb|FJ654700.1|Yellow fever virus 17D/Tiantan, complete genome85028502100%0.078%FJ654700.1Select seq gb|DQ118157.1|Yellow fever virus isolate YF-AVD2791-93F/04 from Spain, complete genome85028502100%0.078%DQ118157.1Select seq emb|X15062.1|Yellow fever virus genomic RNA85028502100%0.078%X15062.1Select seq gb|AF052446.1|AF052446Yellow fever virus clone HONG10 polyprotein gene, complete cds85028502100%0.078%AF052446.1Select seq gb|AF052439.1|AF052439Yellow fever virus clone HONG3 polyprotein gene, complete cds85028502100%0.078%AF052439.1Select seq gb|AF052437.1|AF052437Yellow fever virus clone HONG1 polyprotein gene, complete cds85028502100%0.078%AF052437.1Select seq gb|U17067.1|YFU17067Yellow fever virus vaccine strain 17D-213, complete genome85028502100%0.078%U17067.1Select seq gb|JN811141.1|Yellow fever virus 17D YF-VAX Vero adapted Series A P11, complete genome84988498100%0.078%JN811141.1Select seq gb|AF052445.1|AF052445Yellow fever virus clone HONG9 polyprotein gene, complete cds84988498100%0.078%AF052445.1Select seq gb|AF052438.1|AF052438Yellow fever virus clone HONG2 polyprotein gene, complete cds84988498100%0.078%AF052438.1Select seq gb|JN811142.1|Yellow fever virus 17D YF-VAX Vero adapted Series B P11, complete genome84938493100%0.078%JN811142.1Select seq gb|U54798.1|YFU54798Yellow fever virus strain 85-82H Ivory Coast, complete genome84918491100%0.078%U54798.1Select seq gb|AF094612.1|AF094612Yellow fever virus strain Trinidad 79A isolate 788379, complete genome84328432100%0.078%AF094612.1Select seq gb|JF912181.1|Yellow fever virus strain BeH413820, complete genome83958395100%0.078%JF912181.1Select seq gb|DQ322634.1|YFV replicon vector FMDV-2A-def, complete sequence8210832597%0.078%DQ322634.1Select seq gb|DQ322633.1|YFV replicon vector capsid-def, complete sequence8210832597%0.078%DQ322633.1Select seq gb|DQ322635.1|YFV replicon vector prME-def, complete sequence6542687381%0.078%DQ322635.1Select seq dbj|D14458.1|YFVCMENSYellow fever virus prM gene for precursor polyprotein, partial cds3157315734%0.080%D14458.1Select seq gb|AF052443.1|AF052443Yellow fever virus clone HONG7 polyprotein gene, partial cds2241224126%0.078%AF052443.1Select seq gb|AF052441.1|AF052441Yellow fever virus clone HONG5 polyprotein gene, partial cds2237223726%0.078%AF052441.1Select seq gb|GU951804.1|Yellow fever virus strain BeAn 131 polyprotein gene, partial cds2224222426%0.078%GU951804.1Select seq gb|AH005112.2|Yellow fever virus strain Y5 polyprotein and nonstructural protein NS2A mRNAs, partial cds2143250927%0.080%AH005112.2Select seq gb|AY960140.1|Yellow fever virus strain ArB28153 polyprotein gene, partial cds2131213117%0.086%AY960140.1Select seq gb|DQ322638.1|VEEV replicon vector YFV-C2, complete sequence2120212022%0.080%DQ322638.1Select seq gb|AF052440.1|AF052440Yellow fever virus clone HONG4 polyprotein gene, partial cds2116211622%0.080%AF052440.1Select seq gb|L06480.1|YFVCAPSIDMYellow fever virus capsid protein, M protein, and envelope protein mRNAs2116211622%0.080%L06480.1Select seq gb|DQ322642.1|VEEV replicon vector YFV-C3opt, complete sequence1929192922%0.078%DQ322642.1Select seq gb|DQ322640.1|VEEV replicon vector YFV-C3opt-NS2mut, complete sequence1929192922%0.078%DQ322640.1Select seq gb|U23578.1|YFU23578Yellow fever virus isolate SE7445/Uganda/1964/Human envelope protein (E) mRNA, partial cds1822182214%0.087%U23578.1Select seq gb|U23577.1|YFU23577Yellow fever virus isolate M-112/Sudan/1940/Human envelope protein (E) mRNA, partial cds1813181314%0.087%U23577.1Select seq gb|AY839636.1|Yellow fever virus strain ETH2777/Ethiopia61 envelope protein gene, partial cds1801180114%0.087%AY839636.1Select seq gb|DQ068260.1|Yellow fever virus strain SSUD03-01 envelope protein gene, partial cds1786178614%0.087%DQ068260.1Select seq gb|DQ068264.1|Yellow fever virus strain SSUD03-05 envelope protein gene, partial cds1783178314%0.087%DQ068264.1Select seq gb|DQ068263.1|Yellow fever virus strain SSUD03-04 envelope protein gene, partial cds1783178314%0.087%DQ068263.1Select seq gb|DQ068262.1|Yellow fever virus strain SSUD03-03 envelope protein gene, partial cds1783178314%0.087%DQ068262.1Select seq gb|AY839634.1|Yellow fever virus strain HB1782/CAR86 envelope protein gene, partial cds1783178314%0.087%AY839634.1Select seq gb|U23573.1|YFU23573Yellow fever virus isolate DaHB1504/C. African Republic/1985/Human envelope protein (E) mRNA, partial cds1777177714%0.087%U23573.1Select seq gb|U23569.1|YFU23569Yellow fever virus isolate 7914/Kenya/1993/Human envelope protein (E) mRNA, partial cds1768176814%0.087%U23569.1Select seq gb|U23575.1|YFU23575Yellow fever virus isolate KE93-477/Kenya/1993/Mosquito envelope protein (E) mRNA, partial cds1764176414%0.086%U23575.1Select seq gb|U23571.1|YFU23571Yellow fever virus isolate ArB8883/C. African Republic/1977/Human envelope protein (E) mRNA, partial cds1764176414%0.086%U23571.1Select seq gb|U23576.1|YFU23576Yellow fever virus isolate Kouma/Ethiopia/1961/Human envelope protein (E) mRNA, partial cds1759175914%0.086%U23576.1Select seq gb|AY960138.1|Yellow fever virus strain ArA 20628 polyprotein gene, partial cds1737173717%0.081%AY960138.1Select seq gb|AY960137.1|Yellow fever virus strain Ara29436 polyprotein gene, partial cds1698169817%0.081%AY960137.1Select seq gb|AY960139.1|Yellow fever virus strain Ara6734 polyprotein gene, partial cds1680168017%0.081%AY960139.1Select seq gb|DQ859058.1|Wesselsbron virus strain SAH-177 99871-2 polyprotein gene, complete cds1543206376%0.067%DQ859058.1Select seq gb|EU707555.1|Wesselsbron virus strain SAH177, complete genome1537205276%0.067%EU707555.1Select seq gb|GU073158.1|Yellow fever virus strain Senegal/Ko/ARDX/2000 envelope glycoprotein (E) gene, partial cds1508150814%0.082%GU073158.1Select seq gb|GU073145.1|Yellow fever virus strain Senegal/Ke/ArD149213/2000 envelope glycoprotein (E) gene, partial cds1508150814%0.082%GU073145.1Select seq gb|GU073144.1|Yellow fever virus strain Senegal/Ke/ArD149194/2000 envelope glycoprotein (E) gene, partial cds1508150814%0.082%GU073144.1Select seq gb|GU073136.1|Yellow fever virus strain Mali/Ba/HA872/1987 envelope glycoprotein (E) gene, partial cds1508150814%0.082%GU073136.1Select seq gb|GU073166.1|Yellow fever virus strain Senegal/Ko/HD117294/1995 envelope glycoprotein (E) gene, partial cds1503150314%0.082%GU073166.1Select seq gb|GU073152.1|Yellow fever virus strain Senegal/Ke/ArD156468/2001 envelope glycoprotein (E) gene, partial cds1503150314%0.082%GU073152.1Select seq gb|GU073143.1|Yellow fever virus strain Senegal/Ke/ArD149179/2000 envelope glycoprotein (E) gene, partial cds1503150314%0.082%GU073143.1Select seq gb|GU073141.1|Yellow fever virus strain Senegal/Ke/AnD26923/1978 envelope glycoprotein (E) gene, partial cds1503150314%0.082%GU073141.1Select seq gb|GU073156.1|Yellow fever virus strain Senegal/Ke/ArD25112/1977 envelope glycoprotein (E) gene, partial cds1499149914%0.082%GU073156.1Select seq gb|GU073153.1|Yellow fever virus strain Senegal/Ke/ArD156583/2001 envelope glycoprotein (E) gene, partial cds1499149914%0.082%GU073153.1Select seq gb|GU073137.1|Yellow fever virus strain Mali/Sa/ArA20267/1987 envelope glycoprotein (E) gene, partial cds1494149414%0.082%GU073137.1Select seq gb|GU073135.1|Yellow fever virus strain Gambia/MK/ArD27797/1979 envelope glycoprotein (E) gene, partial cds1494149414%0.082%GU073135.1Select seq gb|GU073149.1|Yellow fever virus strain Senegal/Ke/ArD149815/2000 envelope glycoprotein (E) gene, partial cds1481148114%0.082%GU073149.1Select seq gb|GU073163.1|Yellow fever virus strain Senegal/Ko/ArD114987/1995 envelope glycoprotein (E) gene, partial cds1476147614%0.082%GU073163.1Select seq gb|AY502949.1|Yellow fever virus strain Guinea/2000/human envelope protein (env) gene, partial cds1476147614%0.082%AY502949.1Select seq gb|GU073161.1|Yellow fever virus strain Senegal/Ko/ArD114970/1995 envelope glycoprotein (E) gene, partial cds1472147214%0.081%GU073161.1Select seq gb|GU073159.1|Yellow fever virus strain Senegal/Ko/ArD114891/1995 envelope glycoprotein (E) gene, partial cds1472147214%0.082%GU073159.1Select seq gb|GU073148.1|Yellow fever virus strain Senegal/Ke/ArD149791/2000 envelope glycoprotein (E) gene, partial cds1472147214%0.081%GU073148.1Select seq gb|GU073140.1|Yellow fever virus strain Senegal/Ka/HD122030/1996 envelope glycoprotein (E) gene, partial cds1472147214%0.082%GU073140.1Select seq gb|GU073142.1|Yellow fever virus strain Senegal/Ke/ArD121040/1996 envelope glycoprotein (E) gene, partial cds1467146714%0.082%GU073142.1Select seq gb|GU073146.1|Yellow fever virus strain Senegal/Ke/ArD149214/2000 envelope glycoprotein (E) gene, partial cds1463146314%0.082%GU073146.1Select seq gb|GU073160.1|Yellow fever virus strain Senegal/Ko/ArD114896/1995 envelope glycoprotein (E) gene, partial cds1456145614%0.082%GU073160.1Select seq gb|AY495561.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1456145615%0.081%AY495561.1Select seq gb|GU073164.1|Yellow fever virus strain Senegal/Ko/ArD114988/1995 envelope glycoprotein (E) gene, partial cds1454145414%0.082%GU073164.1Select seq gb|GU073131.1|Yellow fever virus strain Cameroon/HD78359/1990 envelope glycoprotein (E) gene, partial cds1454145414%0.081%GU073131.1Select seq gb|AY359908.2|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1454145415%0.081%AY359908.2Select seq gb|GU073157.1|Yellow fever virus strain Senegal/Ke/ArD99740/1993 envelope glycoprotein (E) gene, partial cds1451145114%0.082%GU073157.1Select seq gb|GU073147.1|Yellow fever virus strain Senegal/Ke/ArD149215/2000 envelope glycoprotein (E) gene, partial cds1449144914%0.082%GU073147.1Select seq gb|U23574.1|YFU23574Yellow fever virus isolate Dar1279/Senegal/1965/Human envelope protein (E) mRNA, partial cds1449144914%0.082%U23574.1Select seq gb|L02865.1|YFVENVAYellow fever virus wild-type envelope protein (env)1449144914%0.082%L02865.1Select seq gb|AY495567.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1447144715%0.081%AY495567.1Select seq gb|GU073130.1|Yellow fever virus strain CAR/Bo/ArB5656/1974 envelope glycoprotein (E) gene, partial cds1445144514%0.081%GU073130.1Select seq gb|AY495571.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1445144515%0.081%AY495571.1Select seq gb|AY359909.1|Yellow fever virus isolate DNA-YF-3 protein E gene, partial cds1445144515%0.081%AY359909.1Select seq gb|GU073139.1|Yellow fever virus strain Senegal/Ka/ArD122522/1996 envelope glycoprotein (E) gene, partial cds1443144314%0.082%GU073139.1Select seq gb|AY359907.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1442144214%0.081%AY359907.1Select seq gb|AY839635.1|Yellow fever virus strain ArD76320/Senegal90 envelope protein gene, partial cds1440144014%0.082%AY839635.1Select seq gb|L02866.1|YFVENVBYellow fever virus envelope protein (env)1440144014%0.082%L02866.1Select seq gb|GU073133.1|Yellow fever virus strain CotedIvoire/SS/ARM154/1995 envelope glycoprotein (E) gene, partial cds1438143814%0.081%GU073133.1Select seq gb|AY495558.1|Yellow fever virus isolate DNA-YF-1 protein E gene, partial cds1438143815%0.081%AY495558.1Select seq gb|GU073162.1|Yellow fever virus strain Senegal/Ko/ArD114972/1995 envelope glycoprotein (E) gene, partial cds1436143614%0.082%GU073162.1Select seq gb|GU073150.1|Yellow fever virus strain Senegal/Ke/ArD149887/2000 envelope glycoprotein (E) gene, partial cds1436143614%0.082%GU073150.1Select seq gb|AY632543.1|Sepik virus polyprotein gene, complete cds1436183276%0.066%AY632543.1Select seq gb|AY495569.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1436143614%0.081%AY495569.1Select seq gb|AY495566.1|Yellow fever virus isolate DNA-YF-7 protein E gene, partial cds1434143415%0.081%AY495566.1Select seq gb|AY495562.1|Yellow fever virus isolate DNA-YF-4 protein E gene, partial cds1434143415%0.081%AY495562.1Select seq gb|AY495559.1|Yellow fever virus isolate DNA-YF-2 protein E gene, partial cds1434143414%0.081%AY495559.1Select seq gb|GU073132.1|Yellow fever virus strain CotedIvoire/De/ArA523/1996 envelope glycoprotein (E) gene, partial cds1431143114%0.082%GU073132.1Select seq gb|DQ859063.1|Sepik virus strain 7148 polyprotein gene, complete cds1431182776%0.066%DQ859063.1Select seq gb|JN226796.1|Wesselsbron virus from South Africa, complete genome1424186575%0.066%JN226796.1Select seq gb|DQ837642.1|Sepik virus strain MK7148, complete genome1422181876%0.066%DQ837642.1Select seq gb|U23580.1|YFU23580Yellow fever virus isolate V-528A/Colombia/1979/Mosquito envelope protein (E) mRNA, partial cds1416141614%0.081%U23580.1Select seq gb|GU073165.1|Yellow fever virus strain Senegal/Ko/ArD114989/1995 envelope glycoprotein (E) gene, partial cds1413141314%0.082%GU073165.1Select seq gb|AY495573.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1411141114%0.081%AY495573.1Select seq gb|AY495570.1|Yellow fever virus vaccine flavimun experimental lot 3000130 protein E gene, partial cds1407140714%0.081%AY495570.1Select seq gb|U23570.1|YFU23570Yellow fever virus isolate AR350397/Brazil/1979/Mosquito envelope protein (E) mRNA, partial cds1407140714%0.081%U23570.1Select seq gb|AY495572.1|Yellow fever virus vaccine flavimun experimental lot 3000131 protein E gene, partial cds1404140414%0.081%AY495572.1Select seq gb|AY495568.1|Yellow fever virus vaccine flavimun experimental lot 3000129 protein E gene, partial cds1404140414%0.081%AY495568.1Select seq gb|U23579.1|YFU23579Yellow fever virus isolate T790882/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1398139814%0.081%U23579.1Select seq gb|U23568.1|YFU23568Yellow fever virus isolate 788379/Trinidad/1979/Mosquito envelope protein (E) mRNA, partial cds1398139814%0.081%U23568.1Select seq gb|GU073134.1|Yellow fever virus strain CotedIvoire/To/DakArAmt7/1973 envelope glycoprotein (E) gene, partial cds1395139513%0.082%GU073134.1Select seq gb|U23572.1|YFU23572Yellow fever virus isolate BA-55/Nigeria/1986/Human envelope protein (E) mRNA, partial cds1395139514%0.081%U23572.1Select seq gb|AY495574.1|Yellow fever virus reference stock RKI-17D-112/95 protein E gene, partial cds1388138814%0.081%AY495574.1Select seq gb|GU073151.1|Yellow fever virus strain Senegal/Ke/ArD156029/2001 envelope glycoprotein (E) gene, partial cds1386138613%0.082%GU073151.1Select seq gb|U23567.1|YFU23567Yellow fever virus isolate 56205/Nigeria/1991/Human envelope protein (E) mRNA, partial cds1386138614%0.081%U23567.1Select seq gb|U23566.1|YFU23566Yellow fever virus isolate 1914-81/Ecuador/1981/Human envelope protein (E) mRNA, partial cds1380138014%0.081%U23566.1Select seq gb|U23565.1|YFU23565Yellow fever virus isolate 1362/Peru/1977/Human envelope protein (E) mRNA, partial cds1380138014%0.081%U23565.1Select seq gb|GU073138.1|Yellow fever virus strain Mauritania/Ro/HD47471/1987 envelope glycoprotein (E) gene, partial cds1314131413%0.081%GU073138.1Select seq gb|U52422.1|YFU52422Yellow fever virus Uga48 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1279127911%0.084%U52422.1Select seq gb|U52392.1|YFU52392Yellow fever virus Car77(883) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1267126711%0.083%U52392.1Select seq gb|DQ859067.1|Potiskum virus strain IBAN 10069 polyprotein gene, complete cds1213153563%0.066%DQ859067.1Select seq gb|DQ859062.1|Saboya virus strain Dak AR D4600 polyprotein gene, complete cds1155123767%0.065%DQ859062.1Select seq gb|AF369669.1|AF369669Yellow fever virus strain 14 FA polyprotein mRNA, partial cds115511556%0.098%AF369669.1Select seq gb|U52398.1|YFU52398Yellow fever virus Ecuador79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1144114411%0.081%U52398.1Select seq gb|U52416.1|YFU52416Yellow fever virus Trinidad54 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1141114111%0.081%U52416.1Select seq gb|U52404.1|YFU52404Yellow fever virus Panama74 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1122112211%0.081%U52404.1Select seq gb|U52389.1|YFU52389Yellow fever virus Brazil35 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1117111711%0.081%U52389.1Select seq gb|U52403.1|YFU52403Yellow fever virus Nigeria46 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1108110811%0.080%U52403.1Select seq gb|U52410.1|YFU52410Yellow fever virus Peru95(153) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1081108111%0.080%U52410.1Select seq gb|U52419.1|YFU52419Yellow fever virus Trinidad79 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1077107711%0.080%U52419.1Select seq gb|U52409.1|YFU52409Yellow fever virus Peru95(149) core, pre-membrane, membrane and envelope proteins mRNA, partial cds1068106811%0.080%U52409.1Select seq gb|U52413.1|YFU52413Yellow fever virus Senegal65 core, pre-membrane, membrane and envelope proteins mRNA, partial cds1059105911%0.080%U52413.1Select seq gb|AF162449.1|AF162449Yellow fever virus isolate PER 1 envelope protein gene, partial cds9249249%0.080%AF162449.1Select seq gb|AF312554.1|AF312554Yellow fever virus glycoprotein E gene, partial cds9219219%0.080%AF312554.1Select seq gb|AF162451.1|AF162451Yellow fever virus isolate PER 3 envelope protein gene, partial cds9219219%0.080%AF162451.1Select seq gb|AF162452.1|AF162452Yellow fever virus isolate PER 4 envelope protein gene, partial cds9159159%0.080%AF162452.1Select seq gb|AF162450.1|AF162450Yellow fever virus isolate PER 2 envelope protein gene, partial cds9119119%0.080%AF162450.1Select seq gb|AF013417.1|AF013417Yellow fever virus strain TN-96 NS5 protein (NS5) gene, partial cds88488410%0.079%AF013417.1Select seq gb|U52424.1|YFU52424Yellow fever virus Uga48 non-structural protein 4A mRNA, partial cds8108107%0.084%U52424.1Select seq gb|AF369673.1|AF369673Yellow fever virus strain HB 1504 polyprotein mRNA, partial cds7807806%0.086%AF369673.1Select seq gb|DQ859057.1|Bouboui virus strain DAK AR B490 polyprotein gene, complete cds771157252%0.067%DQ859057.1Select seq gb|AF369697.1|AF369697Yellow fever virus strain LSF 4 polyprotein mRNA, partial cds7677676%0.085%AF369697.1Select seq gb|DQ859066.1|Jugra virus strain P-9-314 polyprotein gene, complete cds765134349%0.067%DQ859066.1Select seq gb|AF369692.1|AF369692Yellow fever virus strain M 90-5 polyprotein mRNA, partial cds7627626%0.085%AF369692.1Select seq gb|AF369696.1|AF369696Yellow fever virus strain Z 19039 polyprotein mRNA, partial cds7587586%0.085%AF369696.1Select seq gb|AF369695.1|AF369695Yellow fever virus strain SE 7445 polyprotein mRNA, partial cds7587586%0.085%AF369695.1Select seq gb|AF369676.1|AF369676Yellow fever virus strain BC 7914 polyprotein mRNA, partial cds7537536%0.085%AF369676.1Select seq gb|AY839631.1|Yellow fever virus strain HB1782/CAR86 polyprotein gene, partial cds7497496%0.085%AY839631.1Select seq gb|AF369694.1|AF369694Yellow fever virus strain A 709-4-A2 polyprotein mRNA, partial cds7447446%0.085%AF369694.1Select seq gb|AF369675.1|AF369675Yellow fever virus strain Couma polyprotein mRNA, partial cds7447446%0.085%AF369675.1Select seq gb|JX012100.1|Yellow fever virus isolate Ethiopia1966a polyprotein gene, partial cds7427426%0.085%JX012100.1Select seq gb|AF369674.1|AF369674Yellow fever virus strain Serie 227 polyprotein mRNA, partial cds7407406%0.084%AF369674.1Select seq gb|AF369672.1|AF369672Yellow fever virus strain ArB 17239 polyprotein mRNA, partial cds7407406%0.084%AF369672.1Select seq gb|JX012103.1|Yellow fever virus isolate Ethiopia1966d polyprotein gene, partial cds7387386%0.085%JX012103.1Select seq gb|U52394.1|YFU52394Yellow fever virus Car77(883) non-structural protein 4A mRNA, partial cds7387387%0.082%U52394.1Select seq gb|JX012097.1|Yellow fever virus isolate Sudan2003 polyprotein gene, partial cds7357356%0.085%JX012097.1Select seq gb|AY839633.1|Yellow fever virus strain ETH2777/Ethiopia61 polyprotein gene, partial cds7287286%0.084%AY839633.1Select seq gb|JX012099.1|Yellow fever virus isolate Ethiopia1961d polyprotein gene, partial cds7207206%0.085%JX012099.1Select seq gb|U52397.1|YFU52397Yellow fever virus Car77(900) non-structural protein 4A mRNA, partial cds7177177%0.082%U52397.1Select seq gb|JX012098.1|Yellow fever virus isolate Ethiopia1961c polyprotein gene, partial cds7157156%0.085%JX012098.1Select seq gb|AY540464.1|Yellow fever virus strain BeAr513008 polyprotein gene, partial cds7137136%0.084%AY540464.1Select seq gb|AY540477.1|Yellow fever virus strain 1345 polyprotein gene, partial cds7087086%0.083%AY540477.1Select seq gb|AY540467.1|Yellow fever virus strain BeAr513292 polyprotein gene, partial cds7087086%0.083%AY540467.1Select seq gb|AY540449.1|Yellow fever virus strain BeH203410 polyprotein gene, partial cds7087086%0.083%AY540449.1Select seq gb|AY540475.1|Yellow fever virus strain V528A polyprotein gene, partial cds7047046%0.083%AY540475.1Select seq gb|AY540473.1|Yellow fever virus strain "Tennessee" polyprotein gene, partial cds7047046%0.083%AY540473.1Select seq gb|AY540472.1|Yellow fever virus strain BeAr544276 polyprotein gene, partial cds7047046%0.083%AY540472.1Select seq gb|AY540466.1|Yellow fever virus strain BeAr513060 polyprotein gene, partial cds7047046%0.083%AY540466.1Select seq gb|AY540465.1|Yellow fever virus strain BeH512772 polyprotein gene, partial cds7047046%0.083%AY540465.1Select seq gb|AY540459.1|Yellow fever virus strain BeAr424083 polyprotein gene, partial cds7047046%0.083%AY540459.1Select seq gb|AY540455.1|Yellow fever virus strain BeH385780 polyprotein gene, partial cds7047046%0.083%AY540455.1Select seq gb|AY540452.1|Yellow fever virus strain BeAr233436 polyprotein gene, partial cds7047046%0.083%AY540452.1Select seq gb|AY540476.1|Yellow fever virus strain INS347613 polyprotein gene, partial cds6996996%0.083%AY540476.1Select seq gb|AY540470.1|Yellow fever virus strain BeAr527547 polyprotein gene, partial cds6996996%0.083%AY540470.1Select seq gb|AY540447.1|Yellow fever virus strain BeAr142658 polyprotein gene, partial cds6996996%0.083%AY540447.1Select seq gb|AY540436.1|Yellow fever virus strain BeAr628124 polyprotein gene, partial cds6956956%0.083%AY540436.1Select seq gb|DQ859056.1|Banzi virus strain SAH 336 polyprotein gene, complete cds695146963%0.066%DQ859056.1Select seq gb|DQ872411.1|Yellow fever virus strain GML902621 polyprotein gene, partial cds6956956%0.083%DQ872411.1Select seq gb|AY540481.1|Yellow fever virus strain CAREC797984 polyprotein gene, partial cds6956956%0.083%AY540481.1Select seq gb|AY540463.1|Yellow fever virus strain BeAr512943 polyprotein gene, partial cds6956956%0.083%AY540463.1Select seq gb|AY540462.1|Yellow fever virus strain BeAn510268 polyprotein gene, partial cds6956956%0.083%AY540462.1Select seq gb|AY540454.1|Yellow fever virus strain BeAr350397 polyprotein gene, partial cds6956956%0.083%AY540454.1Select seq gb|AY540453.1|Yellow fever virus strain BeH233393 polyprotein gene, partial cds6956956%0.083%AY540453.1Select seq gb|AY540450.1|Yellow fever virus strain BeAr233164 polyprotein gene, partial cds6956956%0.083%AY540450.1Select seq gb|AY540444.1|Yellow fever virus strain BeH107714 polyprotein gene, partial cds6956956%0.083%AY540444.1Select seq gb|L40951.1|FVVNS5PBanzi virus nonstructural protein 5 (NS5) gene, partial cds69369323%0.067%L40951.1Select seq gb|AY540485.1|Yellow fever virus strain CAREC891957 polyprotein gene, partial cds6906906%0.083%AY540485.1Select seq gb|AY540484.1|Yellow fever virus strain CAREC891954 polyprotein gene, partial cds6906906%0.083%AY540484.1Select seq gb|AY540483.1|Yellow fever virus strain CAREC890692 polyprotein gene, partial cds6906906%0.083%AY540483.1Select seq gb|AY540482.1|Yellow fever virus strain CAREC889920 polyprotein gene, partial cds6906906%0.083%AY540482.1Select seq gb|AY540480.1|Yellow fever virus strain Jimenez polyprotein gene, partial cds6906906%0.083%AY540480.1Select seq gb|AY540460.1|Yellow fever virus strain BeAr511437 polyprotein gene, partial cds6906906%0.083%AY540460.1Select seq gb|AY540441.1|Yellow fever virus strain BeAn23536 polyprotein gene, partial cds6906906%0.083%AY540441.1Select seq gb|AY437135.1|Yellow fever virus polyprotein gene, partial cds6886886%0.083%AY437135.1Select seq gb|AY540479.1|Yellow fever virus strain 614819 polyprotein gene, partial cds6866866%0.083%AY540479.1Select seq gb|AY540468.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6866866%0.083%AY540468.1Select seq gb|AY540458.1|Yellow fever virus strain BeH425381 polyprotein gene, partial cds6866866%0.083%AY540458.1Select seq gb|AY540443.1|Yellow fever virus strain BeAr44824 polyprotein gene, partial cds6866866%0.083%AY540443.1Select seq gb|AY540442.1|Yellow fever virus strain BeAr46299 polyprotein gene, partial cds6866866%0.083%AY540442.1Select seq gb|AY540488.1|Yellow fever virus strain PHO42H polyprotein gene, partial cds6816816%0.083%AY540488.1Select seq gb|AY540487.1|Yellow fever virus strain P128MC polyprotein gene, partial cds6816816%0.083%AY540487.1Select seq gb|AY540486.1|Yellow fever virus strain CAREC9515207 polyprotein gene, partial cds6816816%0.083%AY540486.1Select seq gb|AY540461.1|Yellow fever virus strain BeH511843 polyprotein gene, partial cds6816816%0.083%AY540461.1Select seq gb|AY540438.1|Yellow fever virus strain BeAN131 polyprotein gene, partial cds6816816%0.083%AY540438.1Select seq gb|FJ875520.1|Yellow fever virus strain SPAn289568 polyprotein gene, partial cds6776776%0.082%FJ875520.1Select seq gb|FJ875518.1|Yellow fever virus strain SPAn288183 polyprotein gene, partial cds6776776%0.082%FJ875518.1Select seq gb|AY540469.1|Yellow fever virus strain BeAr527198 polyprotein gene, partial cds6776776%0.082%AY540469.1Select seq gb|AY540440.1|Yellow fever virus strain BeAr189 polyprotein gene, partial cds6776776%0.082%AY540440.1Select seq gb|AY540439.1|Yellow fever virus strain BeAr162 polyprotein gene, partial cds6776776%0.082%AY540439.1Select seq gb|HM582843.1|Yellow fever virus strain BeH613582 polyprotein gene, partial cds6736736%0.083%HM582843.1Select seq gb|DQ859060.1|Edge Hill virus strain YMP 48 polyprotein gene, complete cds673142965%0.066%DQ859060.1Select seq gb|FJ875517.1|Yellow fever virus strain SPH258595 polyprotein gene, partial cds6726726%0.082%FJ875517.1Select seq gb|AY540456.1|Yellow fever virus strain BeH379501 polyprotein gene, partial cds6726726%0.082%AY540456.1Select seq gb|AY540437.1|Yellow fever virus strain BeH111 polyprotein gene, partial cds6726726%0.082%AY540437.1Select seq gb|HM582848.1|Yellow fever virus strain BeAr631464 polyprotein gene, partial cds6686686%0.083%HM582848.1Select seq gb|HM582839.1|Yellow fever virus strain TVP11646 polyprotein gene, partial cds6666666%0.083%HM582839.1Select seq gb|EU303239.1|Yellow fever virus note H203410 nonstructural protein 5 (NS5) gene, partial cds6636637%0.079%EU303239.1Select seq gb|HM582845.1|Yellow fever virus strain BeAr527785 polyprotein gene, partial cds6616616%0.082%HM582845.1Select seq gb|DQ859065.1|Uganda S virus polyprotein gene, complete cds661137965%0.066%DQ859065.1Select seq gb|AY540451.1|Yellow fever virus strain BeAn232869 polyprotein gene, partial cds6596596%0.082%AY540451.1Select seq gb|AY540434.1|Yellow fever virus strain OBS8026 polyprotein gene, partial cds6596596%0.082%AY540434.1Select seq gb|AY540490.1|Yellow fever virus strain 35708 polyprotein gene, partial cds6546546%0.082%AY540490.1Select seq gb|AY540474.1|Yellow fever virus strain INS382060 polyprotein gene, partial cds6546546%0.082%AY540474.1Select seq gb|AY161928.1|Yellow fever virus strain 1368 polyprotein gene, partial cds6526526%0.082%AY161928.1Select seq gb|HQ123568.1|Yellow fever virus strain PH71191 polyprotein gene, partial cds6506506%0.082%HQ123568.1Select seq gb|AY540445.1|Yellow fever virus strain BeAn142028 polyprotein gene, partial cds6456456%8e-18081%AY540445.1Select seq gb|AF369683.1|AF369683Yellow fever virus strain H117505 polyprotein mRNA, partial cds6456456%8e-18081%AF369683.1Select seq gb|AY540457.1|Yellow fever virus strain BeH413820 polyprotein gene, partial cds6416416%9e-17981%AY540457.1Select seq gb|AF369685.1|AF369685Yellow fever virus strain 56205 polyprotein mRNA, partial cds6416416%9e-17981%AF369685.1Select seq gb|AF369678.1|AF369678Yellow fever virus strain T. Adeoye polyprotein mRNA, partial cds6416416%9e-17981%AF369678.1Select seq gb|AY690831.1|Yellow fever virus strain SPU 160/03/23 polyprotein gene, partial cds6396395%3e-17885%AY690831.1Select seq gb|AY161951.1|Yellow fever virus strain OBS7904 polyprotein gene, partial cds6376376%1e-17781%AY161951.1Select seq gb|AY540433.1|Yellow fever virus strain OBS7937 polyprotein gene, partial cds6366366%4e-17781%AY540433.1Select seq gb|AY540431.1|Yellow fever virus strain OBS7687 polyprotein gene, partial cds6366366%4e-17781%AY540431.1Select seq gb|AF369682.1|AF369682Yellow fever virus strain H117491 polyprotein mRNA, partial cds6366366%4e-17781%AF369682.1Select seq gb|AF369680.1|AF369680Yellow fever virus strain M. Adejumo polyprotein mRNA, partial cds6366366%4e-17781%AF369680.1Select seq gb|AY161941.1|Yellow fever virus strain OBS2250 polyprotein gene, partial cds6326326%5e-17681%AY161941.1Select seq gb|AY161938.1|Yellow fever virus strain Cepa#2 polyprotein gene, partial cds6326326%5e-17681%AY161938.1Select seq gb|AY540432.1|Yellow fever virus strain OBS7549 polyprotein gene, partial cds6326326%5e-17681%AY540432.1Select seq gb|AF369681.1|AF369681Yellow fever virus strain A. Adeoye polyprotein mRNA, partial cds6326326%5e-17681%AF369681.1Select seq gb|AF369679.1|AF369679Yellow fever virus strain A. Jimo polyprotein mRNA, partial cds6326326%5e-17681%AF369679.1Select seq gb|KM388820.1|Yellow fever virus strain 3A polyprotein gene, partial cds6276276%2e-17481%KM388820.1Select seq gb|AY161948.1|Yellow fever virus strain 03535098 polyprotein gene, partial cds6276276%2e-17481%AY161948.1Select seq gb|AY161939.1|Yellow fever virus strain Cepa#1 polyprotein gene, partial cds6276276%2e-17481%AY161939.1Select seq gb|AY161934.1|Yellow fever virus strain ARVO544 polyprotein gene, partial cds6276276%2e-17481%AY161934.1Select seq gb|AY540478.1|Yellow fever virus strain OBS5041 polyprotein gene, partial cds6276276%2e-17481%AY540478.1Select seq gb|AF369684.1|AF369684Yellow fever virus strain BA 55 polyprotein mRNA, partial cds6276276%2e-17481%AF369684.1Select seq gb|AF369677.1|AF369677Yellow fever virus strain IB AR 45244 polyprotein mRNA, partial cds6276276%2e-17481%AF369677.1Select seq gb|HM582846.1|Yellow fever virus strain 15094 polyprotein gene, partial cds6216216%9e-17381%HM582846.1Select seq gb|AY161933.1|Yellow fever virus strain 1914 polyprotein gene, partial cds6196196%3e-17281%AY161933.1Select seq gb|AY161932.1|Yellow fever virus strain 1899/81 polyprotein gene, partial cds6196196%3e-17281%AY161932.1Select seq gb|DQ872412.1|Yellow fever virus strain CAREC788379 polyprotein gene, partial cds6186186%1e-17180%DQ872412.1Select seq gb|AY161947.1|Yellow fever virus strain OBS6530 polyprotein gene, partial cds6186186%1e-17181%AY161947.1Select seq gb|AY161945.1|Yellow fever virus strain OBS2243 polyprotein gene, partial cds6186186%1e-17181%AY161945.1Select seq gb|AY161944.1|Yellow fever virus strain HEB4246 polyprotein gene, partial cds6186186%1e-17181%AY161944.1Select seq gb|AY161936.1|Yellow fever virus strain HEB4236(153) polyprotein gene, partial cds6186186%1e-17181%AY161936.1Select seq gb|AF369689.1|AF369689Yellow fever virus strain SH 1339 polyprotein mRNA, partial cds6186186%1e-17180%AF369689.1Select seq gb|AF369688.1|AF369688Yellow fever virus strain SH 1464 polyprotein mRNA, partial cds6186186%1e-17180%AF369688.1Select seq gb|KM388819.1|Yellow fever virus strain 1A polyprotein gene, partial cds6166165%4e-17182%KM388819.1Select seq gb|AY161930.1|Yellow fever virus strain 287/78 polyprotein gene, partial cds6166166%4e-17180%AY161930.1Select seq gb|AY161940.1|Yellow fever virus strain OBS2240 polyprotein gene, partial cds6146146%1e-17080%AY161940.1Select seq gb|AY161937.1|Yellow fever virus strain 149 polyprotein gene, partial cds6146146%1e-17080%AY161937.1Select seq gb|AY161935.1|Yellow fever virus strain HEB4224 polyprotein gene, partial cds6146146%1e-17080%AY161935.1Select seq gb|AY161931.1|Yellow fever virus strain R35740 polyprotein gene, partial cds6146146%1e-17080%AY161931.1Select seq gb|AY540446.1|Yellow fever virus strain BeH141816 polyprotein gene, partial cds6146146%1e-17080%AY540446.1Select seq gb|AF369671.1|AF369671Yellow fever virus strain SH 28580 polyprotein mRNA, partial cds6146146%1e-17080%AF369671.1Select seq gb|AF369670.1|AF369670Yellow fever virus strain HD 38564 polyprotein mRNA, partial cds6146146%1e-17080%AF369670.1Select seq gb|AY161943.1|Yellow fever virus strain HEB4245 polyprotein gene, partial cds6106106%2e-16980%AY161943.1Select seq gb|AY161927.1|Yellow fever virus strain 1362/77 polyprotein gene, partial cds6096096%6e-16980%AY161927.1Select seq gb|AF369690.1|AF369690Yellow fever virus strain Dar Ar 276 polyprotein mRNA, partial cds6096096%6e-16980%AF369690.1Select seq gb|AF369687.1|AF369687Yellow fever virus strain SH1446 polyprotein mRNA, partial cds6096096%6e-16980%AF369687.1Select seq gb|AY161929.1|Yellow fever virus strain 1371 polyprotein gene, partial cds6076076%2e-16880%AY161929.1Select seq gb|AY839632.1|Yellow fever virus strain ArD76320/Senegal90 polyprotein gene, partial cds6076076%2e-16880%AY839632.1Select seq gb|AY161950.1|Yellow fever virus strain IQT5591 polyprotein gene, partial cds6056056%7e-16880%AY161950.1Select seq gb|AY161942.1|Yellow fever virus strain HEB4240 polyprotein gene, partial cds6056056%7e-16880%AY161942.1Select seq gb|AF369691.1|AF369691Yellow fever virus strain ArD93388 polyprotein gene, partial cds6056056%7e-16880%AF369691.1Select seq gb|AF369686.1|AF369686Yellow fever virus strain Jose Cachatra polyprotein mRNA, partial cds6056056%7e-16880%AF369686.1Select seq gb|U52402.1|YFU52402Yellow fever virus Nigeria46 non-structural protein 4A mRNA, partial cds6056057%7e-16878%U52402.1Select seq gb|HM582844.1|Yellow fever virus strain FMD1240 polyprotein gene, partial cds6036036%2e-16781%HM582844.1Select seq gb|KM388823.1|Yellow fever virus strain 7A polyprotein gene, partial cds5985985%1e-16582%KM388823.1Select seq gb|HM582847.1|Yellow fever virus strain FVB0196 polyprotein gene, partial cds5985986%1e-16580%HM582847.1Select seq gb|KU308380.1|Bamaga virus isolate CY4270 polyprotein gene, complete cds596144654%4e-16566%KU308380.1Select seq gb|AY161949.1|Yellow fever virus strain OBS6745 polyprotein gene, partial cds5965966%4e-16580%AY161949.1Select seq gb|EF158054.1|St. Louis encephalitis virus strain 75 D 90 polyprotein gene, partial cds59084622%2e-16369%EF158054.1Select seq gb|U52415.1|YFU52415Yellow fever virus Senegal65 non-structural protein 4A mRNA, partial cds5895897%5e-16378%U52415.1
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