niman Posted November 17, 2015 Report Posted November 17, 2015 USDA releases September 2015 North Carolina swine sequences that match 2012 cases.
niman Posted November 17, 2015 Author Report Posted November 17, 2015 LOCUS KT924271 1701 bp cRNA linear VRL 14-NOV-2015 DEFINITION Influenza A virus (A/swine/North Carolina/A01945243/2015(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KT924271 VERSION KT924271.1 GI:949601223 KEYWORDS . SOURCE Influenza A virus (A/swine/North Carolina/A01945243/2015(H3N2)) ORGANISM Influenza A virus (A/swine/North Carolina/A01945243/2015(H3N2)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1701) AUTHORS Lin,K., Huang,H. and Zhang,J. CONSRTM USDA SIV Survelliance TITLE Direct Submission JOURNAL Submitted (19-OCT-2015) National Veterinary Services Laboratory, USDA, 1920 Dayton, Ames, IA 50010, USA FEATURES Location/Qualifiers source 1..1701 /organism="Influenza A virus (A/swine/North Carolina/A01945243/2015(H3N2))" /mol_type="viral cRNA" /strain="A/swine/North Carolina/A01945243/2015" /serotype="H3N2" /isolation_source="lung" /host="swine" /db_xref="taxon:1739957" /segment="4" /country="USA: North Carolina" /collection_date="24-Sep-2015" gene 1..1701 /gene="HA" CDS 1..1701 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALN12305.1" /db_xref="GI:949601224" /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV NSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV IVSTKRSQQTVIPSIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI " sig_peptide 1..48 /gene="HA" mat_peptide 49..1035 /gene="HA" /product="HA1" mat_peptide 1036..1698 /gene="HA" /product="HA2" misc_feature 1..1701 /db_xref="IRD:IRD-A01945243.4" ORIGIN 1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc 61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca 121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag 181 agctcctcaa caggtagaat atgcaatagt cctcaccaaa tccttgatgg gaaaaattgc 241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg 301 gacctttttg ttgaacgaag cacagcatac agcaactgtt acccttatta tgtgccagat 361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac ccaagaaagt 421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt 481 aacagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag 541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac 601 ccgggtacgg acaaagacca aaccaatcta tatgtccaag catcagggag agttatagtc 661 tctaccaaaa gaagccaaca aactgtaatc ccgagtatcg ggtctagacc ctgggtaagg 721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg 781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa 841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca 901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc 961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca 1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag 1081 ggaatggttg acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca 1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta 1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg 1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac 1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg 1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaac 1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga 1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca aatcaaaggt 1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc 1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt 1681 aggtgcaaca tttgcattta a
niman Posted November 17, 2015 Author Report Posted November 17, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI586151A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)3120.10.000000e+001697/1701 (99%)EPI573035A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)3116.40.000000e+001696/1701 (99%)EPI559548A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI558839A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI558834A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI558819A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)3114.60.000000e+001696/1701 (99%)EPI584808A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI573793A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI623700A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)3098.00.000000e+001693/1701 (99%)EPI669209A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI623703A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI542447A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI532373A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI573807A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)3088.70.000000e+001691/1701 (99%)EPI620526A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)3086.90.000000e+001691/1701 (99%)EPI620523A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)3083.20.000000e+001690/1701 (99%)EPI669224A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI623626A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI574154A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI531059A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)3081.30.000000e+001690/1701 (99%)EPI647569A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)3079.50.000000e+001689/1701 (99%)EPI590659A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)3079.50.000000e+001689/1701 (99%)EPI663380A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI663334A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI597655A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)3075.80.000000e+001690/1702 (99%)EPI545416A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI542551A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI534947A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI532376A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)3075.80.000000e+001689/1701 (99%)EPI623651A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)3073.90.000000e+001688/1701 (99%)EPI542524A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)3072.10.000000e+001688/1701 (99%)EPI538664A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)3072.10.000000e+001688/1701 (99%)EPI533782A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)3072.10.000000e+001688/1701 (99%)EPI669236A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI663367A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI620490A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI572994A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI550293A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI545840A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI530996A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)3070.30.000000e+001688/1701 (99%)EPI542548A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)3066.60.000000e+001687/1701 (99%)EPI647504A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI559025A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI558883A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI558842A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI545858A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI545816A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI545379A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI542542A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI538670A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)3064.70.000000e+001687/1701 (99%)EPI597661A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)3061.00.000000e+001686/1701 (99%)EPI593956A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI573350A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI550296A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI548259A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI545407A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI542563A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)3059.20.000000e+001686/1701 (99%)EPI600344A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI598964A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573479A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573020A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI559533A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI545813A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI542474A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)3051.80.000000e+001682/1698 (99%)EPI600449A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)3049.90.000000e+001684/1701 (99%)EPI600431A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)3049.90.000000e+001684/1701 (99%)EPI573818A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI573011A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)3044.40.000000e+001683/1701 (98%)EPI559530A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI557544A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI557542A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI542530A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI600347A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)3040.70.000000e+001682/1701 (98%)EPI558851A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)3040.70.000000e+001681/1699 (98%)EPI612571A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI573017A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI573003A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI557534A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001683/1702 (98%)EPI510214A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI510211A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI510199A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI510190A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI510173A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI507284A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI505102A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI504864A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI460390A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI600470A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)3033.30.000000e+001681/1701 (98%)EPI573452A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)3033.30.000000e+001681/1701 (98%)EPI669154A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI647584A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573495A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573486A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573448A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI545852A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI538990A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI530299A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI530284A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI508836A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI460381A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573445A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)3027.80.000000e+001680/1701 (98%)EPI508858A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)3027.80.000000e+001680/1701 (98%)EPI620514A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI573599A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI530309A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI505062A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI460387A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)3025.90.000000e+001681/1702 (98%)EPI460372A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI573602A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)3024.10.000000e+001679/1701 (98%)EPI573000A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)3024.10.000000e+001679/1701 (98%)EPI669135A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)3022.20.000000e+001679/1701 (98%)EPI663313A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)3022.20.000000e+001679/1701 (98%)EPI669247A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI669178A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI653893A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI586038A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI584802A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI531097A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI505039A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI573714A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)3016.70.000000e+001678/1701 (98%)EPI584734A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI398672A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)3011.20.000000e+001676/1699 (98%)EPI391413A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)3011.20.000000e+001676/1699 (98%)EPI391404A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)3011.20.000000e+001676/1699 (98%)EPI366030A/Utah/10/2012 (A/H3N2) segment 4 (HA)3011.20.000000e+001676/1699 (98%)EPI642513A/Michigan/39/2015 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI509764A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI396270A/Indiana/133/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI394913A/Indiana/132/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI388332A/Utah/10/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI388327A/Indiana/14/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI342603A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI559527A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI573566A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI573051A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)3000.10.000000e+001675/1701 (98%)EPI528431A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI527870A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI527113A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI453427A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI453426A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001675/1700 (98%)EPI451202A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI446888A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI446879A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI446800A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI443550A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI426887A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI414186A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI414170A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI408202A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI406576A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI406504A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI404890A/Iowa/16/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI401609A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397913A/Indiana/123/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397906A/Illinois/11/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397905A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397662A/Maryland/28/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397396A/Indiana/93/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397210A/Maryland/25/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI397006A/Ohio/78/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI396262A/Indiana/127/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI396254A/Indiana/126/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI395883A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI395259A/Ohio/35/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI395251A/Indiana/152/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI394944A/Maryland/22/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI393306A/Indiana/18/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI392926A/Maryland/20/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388352A/Indiana/20/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388346A/Indiana/15/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388298A/Indiana/19/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388282A/Indiana/13/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI383528A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI381873A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI351662A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI346493A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI339171A/Maine/06/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI573439A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI558822A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)2998.20.000000e+001676/1702 (98%)EPI398492A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)2996.40.000000e+001673/1699 (98%)EPI395328A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)2996.40.000000e+001673/1699 (98%)EPI653868A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI653857A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI653774A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI493012A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI492349A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446927A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446919A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446863A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446830A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI443558A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI443526A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI433540A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI433533A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI433306A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI433298A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI426890A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI424073A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI414178A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI408199A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI406530A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI401702A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI401684A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI401680A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI401667A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI400105A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398542A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398534A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398526A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398518A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398500A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI398479A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397969A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397962A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397954A/Ohio/85/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397939A/Ohio/41/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397548A/Ohio/84/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397540A/Ohio/56/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397532A/Ohio/47/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397524A/Ohio/44/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397516A/Ohio/36/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397503A/Indiana/104/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397446A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397432A/Ohio/81/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397426A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397385A/Indiana/138/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397351A/Ohio/37/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397340A/Indiana/150/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397089A/Indiana/52/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396299A/Maryland/23/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396280A/Indiana/144/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396208A/Indiana/149/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396192A/Ohio/77/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396183A/Indiana/77/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396175A/Ohio/80/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395874A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395866A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395718A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395711A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395357A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395344A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395270A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395267A/Ohio/65/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI394937A/Ohio/75/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI394933A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI394921A/Ohio/69/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI394077A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI393914A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI393782A/Ohio/74/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI393702A/Ohio/64/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)
niman Posted November 17, 2015 Author Report Posted November 17, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI586152A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)2549.50.000000e+001400/1410 (99%)EPI573036A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI558840A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI558835A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI558820A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI584809A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)2527.30.000000e+001396/1410 (99%)EPI573794A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI559549A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI663381A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)2516.30.000000e+001394/1410 (98%)EPI623701A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)2516.30.000000e+001394/1410 (98%)EPI620491A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)2516.30.000000e+001394/1410 (98%)EPI647505A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)2510.70.000000e+001393/1410 (98%)EPI590660A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)2510.70.000000e+001393/1410 (98%)EPI559534A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)2510.70.000000e+001393/1410 (98%)EPI531060A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)2510.70.000000e+001393/1410 (98%)EPI533783A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)2507.00.000000e+001392/1410 (98%)EPI532377A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)2507.00.000000e+001392/1410 (98%)EPI647570A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI573351A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI545841A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI545408A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI545380A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI542564A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI542552A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI542543A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI542531A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI538665A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI534948A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI542549A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)2501.50.000000e+001391/1410 (98%)EPI532374A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)2501.50.000000e+001391/1410 (98%)EPI530997A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)2501.50.000000e+001391/1410 (98%)EPI669155A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI663335A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI623704A/swine/Indiana/A01260882/2015 (A/H3N2) segment 6 (NA)2499.60.000000e+001392/1411 (98%)EPI612572A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI574155A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI573480A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI559531A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI559026A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI558882A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI558852A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI558843A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI550294A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI542448A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI669237A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI623652A/swine/Illinois/A02076874/2015 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI620524A/swine/Iowa/A02076873/2015 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI597662A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI572995A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI538671A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)2494.10.000000e+001390/1410 (98%)EPI533959A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)2494.10.000000e+001391/1411 (98%)EPI669248A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)2490.40.000000e+001389/1410 (98%)EPI669225A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI669210A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI647624A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI620527A/swine/Iowa/A02077538/2015 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI620515A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI600450A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI600348A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI573021A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI550297A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI548260A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI530300A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001390/1411 (98%)EPI530285A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001390/1411 (98%)EPI510212A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001390/1411 (98%)EPI507285A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)2488.60.000000e+001390/1411 (98%)EPI505103A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)2488.60.000000e+001390/1411 (98%)EPI460388A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI460382A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI460373A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI460367A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)2488.60.000000e+001389/1410 (98%)EPI593957A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)2484.90.000000e+001388/1410 (98%)EPI504865A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)2484.90.000000e+001389/1411 (98%)EPI600345A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI598965A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI597656A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI545814A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI542525A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI530310A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001389/1411 (98%)EPI505063A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)2483.00.000000e+001389/1411 (98%)EPI460391A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI446797A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI443547A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI443523A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI433303A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI433295A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI414172A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI401685A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI401681A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI400106A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI400096A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI398520A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI398502A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI398494A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI398486A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI398034A/Maryland/22/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397661A/Maryland/28/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397620A/Maryland/25/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397531A/Ohio/47/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397523A/Ohio/44/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397515A/Ohio/36/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397431A/Ohio/81/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397350A/Ohio/37/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397208A/Ohio/78/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI397088A/Indiana/52/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI396276A/Indiana/135/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI396261A/Indiana/127/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI396253A/Indiana/126/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI396234A/Ohio/34/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI395885A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI395336A/Indiana/21/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI395266A/Ohio/65/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI395258A/Ohio/35/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI394062A/Indiana/21/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393694A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393680A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393672A/Ohio/71/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393316A/Ohio/38/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393310A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI393305A/Indiana/18/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI392704A/Indiana/52/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI392683A/Indiana/13/2012 (A/H3N2) segment 6 (NA)2483.00.000000e+001388/1410 (98%)EPI573808A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI573453A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI559528A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)2477.50.000000e+001388/1411 (98%)EPI558823A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI505043A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)2477.50.000000e+001388/1411 (98%)EPI502642A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI446924A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI446916A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI446868A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI446860A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI446835A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI443539A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI443531A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI443515A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI443507A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI433542A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI433535A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI408203A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI406575A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI401703A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI401688A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI398671A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI398544A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI398536A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397946A/Ohio/84/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397904A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397627A/Ohio/63/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397626A/Ohio/57/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397623A/Indiana/150/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397554A/Ohio/86/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397502A/Indiana/104/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397425A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397403A/Indiana/99/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI397384A/Indiana/138/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI396298A/Maryland/23/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI396207A/Indiana/149/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI396191A/Ohio/77/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI396182A/Indiana/77/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI395876A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI395868A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI395860A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI395852A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI394925A/Illinois/11/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI394905A/Ohio/62/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI394059A/Indiana/38/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI393701A/Ohio/64/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI393518A/Indiana/65/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI393297A/Indiana/21/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI393291A/Indiana/38/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI392752A/Indiana/16/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI392698A/Indiana/46/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI392695A/Indiana/43/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI392691A/Indiana/31/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI383539A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI647585A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI573600A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI550081A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI546918A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI546892A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI545817A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)2471.90.000000e+001387/1411 (98%)EPI545417A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)2471.90.000000e+001387/1411 (98%)EPI531098A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 6 (NA)2471.90.000000e+001387/1411 (98%)EPI527842A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527152A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527135A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527073A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527050A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527008A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI527002A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI526977A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI526940A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI526912A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI509736A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI492350A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI468208A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI468200A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI465419A/Indiana/17/2013 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI446885A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI446876A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI446827A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI443555A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI427179A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI426886A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI414188A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI406470A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI404892A/Iowa/16/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI401610A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI400102A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI398123A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397931A/Ohio/19/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397918A/Ohio/17/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397750A/Ohio/87/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397625A/Ohio/43/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397624A/Ohio/80/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397621A/Ohio/79/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397547A/Ohio/83/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397539A/Ohio/56/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397395A/Indiana/93/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397377A/Indiana/123/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397363A/Ohio/23/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI397097A/Indiana/103/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI396279A/Indiana/144/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI396269A/Indiana/133/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395958A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395950A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395934A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395921A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395742A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395330A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395327A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI395250A/Indiana/152/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI394936A/Ohio/75/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI394932A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI394920A/Ohio/69/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI394912A/Indiana/132/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI393696A/Indiana/20/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI393687A/Ohio/23/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI393666A/Ohio/28/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI393510A/Ohio/52/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI393294A/Ohio/24/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI392677A/Ohio/13/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388365A/Ohio/17/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388345A/Indiana/15/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388338A/Ohio/16/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388329A/Ohio/20/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388320A/Ohio/18/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388318A/Ohio/20/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)EPI388311A/Ohio/15/2012 (A/H3N2) segment 6 (NA)2471.90.000000e+001386/1410 (98%)
niman Posted November 17, 2015 Author Report Posted November 17, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI559526A/swine/North Carolina/A01476510/2014 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545857A/swine/North Carolina/A01476420/2014 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545151A/swine/North Carolina/A01476110/2014 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI542443A/swine/North Carolina/A01476193/2014 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI509549A/swine/North Carolina/A01290890/2013 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI504857A/swine/North Carolina/A01290932/2013 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI502751A/swine/North Carolina/A01290790/2013 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI502706A/swine/North Carolina/A01290891/2013 (A/H1N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669188A/swine/Indiana/A01260948/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI620622A/swine/Michigan/A02077465/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI620536A/swine/Indiana/A01554793/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI600430A/swine/North Carolina/A01476925/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI600390A/swine/Ohio/A01476936/2014 (A/H0) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI597654A/swine/North Carolina/A01476855/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI593915A/swine/Indiana/A01840392/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586141A/swine/Indiana/A01840859/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586049A/swine/Iowa/A01840762/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI584813A/swine/Ohio/A01840938/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI573295A/swine/Indiana/A01260713/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI568692A/swine/Indiana/A01260720/2014 (A/H1N1) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI559553A/swine/North Carolina/A01466487/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI559544A/swine/Indiana/A01476558/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI558912A/swine/Indiana/A01260699/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI545415A/swine/North Carolina/A01476317/2014 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI538995A/swine/United State/A01410955/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI545848A/swine/North Carolina/A01476349/2014 (A/H1N2) segment 7 (MP)1788.70.000000e+00977/982 (99%)EPI663608A/swine/Indiana/A01260943/2015 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI641830A/swine/Indiana/A02025102/2015 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI623671A/swine/Indiana/A01554928/2015 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI623653A/swine/Illinois/A02076874/2015 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620528A/swine/Iowa/A02077538/2015 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI620525A/swine/Iowa/A02076873/2015 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI586058A/swine/Indiana/A01840825/2015 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI584786A/swine/North Carolina/A01840982/2015 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI573737A/swine/Indiana/A01260717/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI573713A/swine/Kansas/14-032475/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI572993A/swine/North Carolina/A01840086/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI548280A/swine/North Carolina/A01476467/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI545412A/swine/North Carolina/A01476343/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI542559A/swine/North Carolina/A01476080/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI542556A/swine/North Carolina/A01411888/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI542467A/swine/North Carolina/A01476202/2014 (A/H1N1) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI508915A/swine/Oklahoma/A01409770/2014 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI459635A/swine/North Carolina/A01432728/2013 (A/H1N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI398670A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI663388A/swine/North Carolina/A02025581/2015 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI641833A/swine/Indiana/A02025101/2015 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI620589A/swine/Arkansas/A02077488/2015 (A/H1N1) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI600361A/swine/North Carolina/A01477834/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI600343A/swine/North Carolina/A01477803/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI584739A/swine/Indiana/A01840956/2015 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI573721A/swine/Kansas/14-032900/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI568721A/swine/Arkansas/A01840239/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI545403A/swine/North Carolina/A01476254/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI542562A/swine/North Carolina/A01476107/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI542535A/swine/North Carolina/A01476108/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI542529A/swine/North Carolina/A01477103/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI542473A/swine/North Carolina/A01476173/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI531070A/swine/North Carolina/A01410522/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI531055A/swine/North Carolina/A01410564/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI531004A/swine/North Carolina/A01410562/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI530271A/swine/North Carolina/A01475223/2014 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI502736A/swine/North Carolina/A01290889/2013 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI499742A/swine/North Carolina/A01290721/2013 (A/H0) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI446486A/swine/Iowa/A01432529/2013 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI558844A/swine/North Carolina/A01477778/2014 (A/H0) segment 7 (MP)1777.60.000000e+00974/982 (99%)EPI663330A/swine/North Carolina/A01770259/2015 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI653990A/swine/Indiana/A01260890/2015 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI653031A/swine/Indiana/A01260893/2015 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI530289A/swine/North Carolina/A01410500/2014 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI492963A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI492380A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI489727A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI467459A/swine/North Carolina/A01432948/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI441498A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI433271A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI426874A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414110A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414104A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414053A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414050A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414038A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI408198A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI407026A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI406535A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI398690A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI397543A/Ohio/83/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI395329A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI395324A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391475A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391470A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI530262A/swine/North Carolina/A01410501/2014 (A/H1N2) segment 7 (MP)1772.10.000000e+00974/982 (99%)EPI671797A/swine/North Carolina/A01945071/2015 (A/H1N2) segment 7 (MP)1770.20.000000e+00975/983 (99%)EPI546902A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI531043A/swine/North Carolina/A01410563/2014 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI499548A/swine/Iowa/A01365906/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492948A/swine/Iowa/A01365608/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492438A/swine/Iowa/A01364803/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492351A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI487944A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI487880A/swine/Iowa/A01365406/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI464431A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI451230A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI449017A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446881A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446873A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446857A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446832A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446824A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446733A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI433321A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI427146A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI427131A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI414181A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI407274A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI406513A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401715A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401659A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401615A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401145A/swine/North Carolina/A01270509/2012 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI399378A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI398545A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI398537A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI398122A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397957A/Ohio/88/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397943A/Ohio/84/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397902A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397551A/Ohio/86/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397535A/Ohio/56/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397435A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI397421A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI396197A/Ohio/79/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI396187A/Ohio/77/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI396172A/Ohio/80/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395930A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395877A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395869A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395845A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395354A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395340A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI395268A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI394928A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI393916A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI393699A/Ohio/64/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI391459A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI390675A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI383548A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI347602A/Iowa/07/2011 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI346435A/Iowa/08/2011 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI346427A/Iowa/07/2011 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI346419A/Iowa/09/2011 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI341736A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI394067A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)1768.40.000000e+00973/981 (99%)EPI600424A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI598963A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI557795A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550295A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550280A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550224A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550215A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550173A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550138A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550117A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550103A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550082A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550068A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI550061A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI549963A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI547388A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI542550A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI542544A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI538919A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI538666A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI534949A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI532375A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI530998A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI530308A/swine/North Carolina/A01410321/2014 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI528475A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI528435A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI528427A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI527868A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI527099A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI527088A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI526885A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI509787A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI509784A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI509775A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI507295A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI505083A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI505070A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI505038A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI502660A/swine/Minnesota/A01409450/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI502385A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI499890A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI499733A/swine/North Carolina/A01290777/2013 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI492390A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI492377A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI485991A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI485983A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI484455A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI482815A/Indiana/21/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI482812A/Indiana/11/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI476669A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI472212A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI472197A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI472194A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI468209A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI468201A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI465418A/Indiana/17/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI465389A/Indiana/09/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI465386A/Indiana/10/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI465383A/Indiana/07/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI463710A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI461427A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI461420A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI461386A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI460975A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459607A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459599A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459591A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459573A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459535A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459520A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459499A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459488A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI459466A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457158A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457150A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457142A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457134A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457126A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI457118A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI453568A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI453452A/swine/Iowa/A01432659/2013 (A/H1N1) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI453430A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI451224A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI451205A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI448836A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI447028A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI446921A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI446913A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI446730A/swine/Ohio/A01349559/2013 (A/H1N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443536A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443528A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443512A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443504A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443110A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443107A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443100A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)EPI443097A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)1764.70.000000e+00973/982 (99%)
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