October 2015 Illinois Swine Match 2012 Cases

niman · December 17, 2015

USDA releases October 2015 Illinois swine sequences that match 2012 cases.

niman · December 17, 2015

LOCUS       KU171028                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Illinois/A01749100/2015(H3N2)) segment 4
            hemagglutinin (HA) gene, complete cds.
ACCESSION   KU171028
VERSION     KU171028.1  GI:960313207
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Illinois/A01749100/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Illinois/A01749100/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  CONSRTM   USDA Swine Surveillance
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2015) National Veterinary Services Laboratories,
            USDA, 1920 Dayton Ave, Ames, IA 50010, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Illinois/A01749100/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Illinois/A01749100/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1758726"
                     /segment="4"
                     /country="USA"
                     /collection_date="20-Oct-2015"
                     /note="passage details: P1"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83168.1"
                     /db_xref="GI:960313208"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGSMEFTQESFNWTGVAQDGSSYACRRGSV
                     NSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacatc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg taaaaattgc
      241 acactgatag atgctctatt gggggaccct cactgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcagca tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aacagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtgagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtggaaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtga acaagatcac atatggagca
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa gtttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgagaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3094.3	0.000000e+00	1691/1699 (99%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3094.3	0.000000e+00	1691/1699 (99%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3083.2	0.000000e+00	1689/1699 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1688/1699 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3073.9	0.000000e+00	1687/1699 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1687/1699 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1687/1699 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1687/1699 (99%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1686/1699 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1686/1699 (99%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1686/1699 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1686/1699 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1685/1699 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1685/1699 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1685/1699 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1685/1699 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1685/1699 (99%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3057.3	0.000000e+00	1684/1699 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3057.3	0.000000e+00	1684/1699 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3057.3	0.000000e+00	1684/1699 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1684/1699 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3051.8	0.000000e+00	1683/1699 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1683/1699 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1683/1699 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1683/1699 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1683/1699 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1682/1699 (98%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1682/1699 (98%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1682/1699 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1700 (99%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1682/1699 (98%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1681/1699 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1680/1698 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1681/1699 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3035.2	0.000000e+00	1680/1699 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3035.2	0.000000e+00	1680/1699 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1680/1699 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1680/1699 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1680/1699 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1680/1699 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1679/1699 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1679/1699 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1679/1699 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1679/1699 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1678/1699 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1678/1699 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1677/1699 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1677/1699 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1677/1699 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3018.5	0.000000e+00	1677/1699 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1677/1699 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1677/1699 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3013.0	0.000000e+00	1675/1697 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1676/1699 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1676/1699 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1675/1699 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1675/1699 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3007.5	0.000000e+00	1675/1699 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3007.5	0.000000e+00	1675/1699 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642512	A/Michigan/39/2015 (A/H3N2) segment 6 (NA)	2582.7	0.000000e+00	1406/1410 (99%)
EPI663317	A/swine/Illinois/A01770246/2015 (A/H3N2) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI645060	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI586039	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI584735	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI538991	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI671793	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI573052	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545853	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI597689	A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI590498	A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545881	A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545777	A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI542568	A/swine/South Dakota/A01482581/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI531098	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI597692	A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI538921	A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI600310	A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI558899	A/swine/Iowa/A01566473/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI600302	A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI586063	A/swine/Iowa/A01478820/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI573573	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI508859	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI623636	A/swine/Iowa/A02077681/2015 (A/H1N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510215	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510200	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510191	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510174	A/swine/Illinois/A01411461/2014 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI492943	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI590795	A/swine/Illinois/A01470861/2015 (A/H1N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI487337	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI467963	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI465387	A/Indiana/10/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI586093	A/swine/Minnesota/A01489541/2015 (A/H1N2) segment 6 (NA)	2468.2	0.000000e+00	1386/1411 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2468.2	0.000000e+00	1385/1410 (98%)
EPI641618	A/swine/Illinois/A02024907/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI621372	A/swine/Illinois/A01820488/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI612719	A/swine/Illinois/A01820457/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI612549	A/swine/Illinois/A01471010/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI597683	A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI573470	A/swine/Iowa/A01840226/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI550081	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546918	A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546892	A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527842	A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527152	A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527135	A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527073	A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527050	A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527008	A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527002	A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526977	A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526940	A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526912	A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI505031	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI501537	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468208	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468200	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI465419	A/Indiana/17/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI460976	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443111	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443101	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443098	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI424075	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI669181	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI600387	A/swine/Indiana/A01477819/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI572999	A/swine/Arkansas/A01840027/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI669717	A/swine/Indiana/14TOSU0001/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669714	A/swine/Ohio/14TOSU0158/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669687	A/swine/Ohio/14TOSU0566/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669679	A/swine/Indiana/14TOSU8050/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669678	A/swine/Indiana/14TOSU0342/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669663	A/swine/Ohio/14TOSU21817/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669653	A/swine/Indiana/14TOSU8041/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669637	A/swine/Ohio/14TOSU0422/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669633	A/swine/Ohio/14TOSU0463/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669624	A/swine/Ohio/14TOSU21811/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669608	A/swine/Ohio/14TOSU0563/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669591	A/swine/Indiana/14TOSU0011/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669541	A/swine/Ohio/14TOSU0435/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669531	A/swine/Ohio/14TOSU21800/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669469	A/swine/Indiana/14TOSU0343/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669423	A/swine/Ohio/14TOSU21805/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669419	A/swine/Ohio/14TOSU21815/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669407	A/swine/Indiana/14TOSU0235/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669397	A/swine/Indiana/14TOSU3013/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669396	A/swine/Indiana/14TOSU8019/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669387	A/swine/Ohio/14TOSU21806/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669386	A/swine/Ohio/14TOSU21808/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669364	A/swine/Indiana/14TOSU0374/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669330	A/swine/Ohio/14TOSU0143/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669327	A/swine/Indiana/14TOSU0226/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669324	A/swine/Indiana/14TOSU0231/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669319	A/swine/Indiana/14TOSU2891/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669315	A/swine/Ohio/14TOSU21839/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669311	A/swine/Ohio/14TOSU21812/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669307	A/swine/Ohio/14TOSU21816/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669304	A/swine/Ohio/14TOSU21801/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669301	A/swine/Indiana/14TOSU0364/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620531	A/swine/Minnesota/A01847108/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620495	A/swine/Iowa/A02077555/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI590775	A/swine/South Dakota/A01841915/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568724	A/swine/Arkansas/A01840187/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568718	A/swine/Illinois/A01555180/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568688	A/swine/Arkansas/A01840185/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI546925	A/swine/North Dakota/A01104084/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545812	A/swine/Indiana/A01476391/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545372	A/swine/Iowa/A01476238/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545270	A/swine/Minnesota/A01565076/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545142	A/swine/Indiana/A01260591/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544948	A/swine/Minnesota/A01503773/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544945	A/swine/Minnesota/A01503777/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544942	A/swine/Minnesota/A01503779/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544810	A/swine/Minnesota/A01503781/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620592	A/swine/Illinois/A02076652/2015 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI600463	A/swine/Illinois/A01555038/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI573483	A/swine/Arkansas/A01840240/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI573465	A/swine/Arkansas/A01555210/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI669694	A/swine/Ohio/14TOSU0133/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669667	A/swine/Ohio/14TOSU21818/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669455	A/swine/Indiana/14TOSU0006/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669295	A/swine/Ohio/14TOSU0122/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI641460	A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI623677	A/swine/Illinois/A01554952/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI586105	A/swine/Iowa/A01470314/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545830	A/swine/Iowa/A01476395/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545775	A/swine/Minnesota/A01565290/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI533920	A/swine/Iowa/A01481221/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI620625	A/swine/Arkansas/A01554688/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI597651	A/swine/Iowa/A01476858/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573343	A/swine/Minnesota/A01567014/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI548243	A/swine/Iowa/A01476456/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI347605	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI663342	A/swine/Iowa/A01769394/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI623680	A/swine/Iowa/A01822197/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI621569	A/swine/Iowa/A01822175/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI621548	A/swine/Iowa/A01822205/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI620471	A/swine/Iowa/A01847871/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612503	A/swine/Minnesota/A01847477/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612494	A/swine/Minnesota/A01847455/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI449017	A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433321	A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI427146	A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI427131	A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI406513	A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI399472	A/swine/North Carolina/A01300820/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI395845	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI391459	A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI390675	A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI383548	A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI347602	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346435	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346427	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346419	A/Iowa/09/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI341736	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI539162	A/Ohio/02/2014 (A/H3N2) segment 7 (MP)	1766.5	0.000000e+00	966/971 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI472194	A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461427	A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461420	A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461386	A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459607	A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459599	A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459591	A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459573	A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459535	A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459520	A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459499	A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459488	A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459466	A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457158	A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457150	A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457142	A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457134	A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457126	A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457118	A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI453430	A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI441649	A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433310	A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415974	A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415966	A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415958	A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415950	A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415942	A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415926	A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415918	A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415904	A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415896	A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415888	A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415880	A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415871	A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415862	A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415853	A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415846	A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415838	A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415830	A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415812	A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415804	A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415796	A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415779	A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415771	A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415762	A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415745	A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415737	A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415720	A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415685	A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415617	A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415573	A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415556	A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415548	A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415497	A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415481	A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415473	A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415465	A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415457	A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415449	A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415441	A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415433	A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415425	A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415415	A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415411	A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415403	A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415395	A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415387	A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415379	A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415371	A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415365	A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415357	A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415349	A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415341	A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415313	A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415289	A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415257	A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415249	A/swine/Ohio/11SW113/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415241	A/swine/Ohio/11SW112/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415225	A/swine/Ohio/11SW108/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI408330	A/swine/Indiana/A01432188/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI406668	A/swine/Iowa/A01203977/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397414	A/Michigan/23/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397342	A/Michigan/19/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395346	A/Michigan/20/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395287	A/Illinois/11/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391144	A/swine/Indiana/A01202621/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391142	A/swine/Indiana/A01202632/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390882	A/swine/Michigan/A01203374/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390881	A/swine/Indiana/A01203372/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390671	A/swine/Indiana/A01243255/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI388330	A/Utah/10/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433327	A/swine/Wyoming/A01444566/2013 (A/H3N2) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI620604	A/swine/Iowa/A02076786/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584851	A/swine/Nebraska/A01489870/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584830	A/swine/Nebraska/A01489868/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI541963	A/Ohio/4319/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	962/967 (99%)
EPI539063	A/swine/Nebraska/A01501767/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI532390	A/swine/Illinois/A01411761/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527873	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527116	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI526872	A/swine/Minnesota/A01480518/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505095	A/swine/Nebraska/A01409647/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI501539	A/swine/South Dakota/A01366063/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI499646	A/swine/Iowa/A01290671/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492657	A/swine/Nebraska/A01394342/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492356	A/swine/Indiana/A00968365/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI487955	A/swine/Indiana/A01260366/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI487944	A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI476530	A/swine/Illinois/A01398587/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI472154	A/swine/Wyoming/A01397389/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI467890	A/swine/Nebraska/A01397576/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI461446	A/swine/Wyoming/A01381202/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI453429	A/swine/Korea/A18/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451185	A/swine/Pennsylvania/A01432652/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451178	A/swine/Wyoming/A01379327/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451175	A/swine/Wyoming/A01379354/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI438228	A/swine/Indiana/A01260209/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI427201	A/swine/Indiana/A01260183/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI416865	A/swine/Iowa/A01432207/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI415934	A/swine/Ohio/11SW236/2011 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI415703	A/swine/Ohio/11SW200/2011 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401145	A/swine/North Carolina/A01270509/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI399378	A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)

niman · December 17, 2015

LOCUS       KU143673                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Illinois/A01945618/2015(mixed)) clone H3
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143673
VERSION     KU143673.1  GI:960313836
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Illinois/A01945618/2015(mixed))
  ORGANISM  Influenza A virus (A/swine/Illinois/A01945618/2015(mixed))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Illinois/A01945618/2015(mixed))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Illinois/A01945618/2015"
                     /serotype="mixed"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755966"
                     /segment="4"
                     /clone="H3"
                     /country="USA: Illinois"
                     /collection_date="14-Oct-2015"
                     /note="mixed infection: H1H3,N2"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83296.1"
                     /db_xref="GI:960313837"
                     /translation="MKTIIAFSCILCLIFAQKLPVSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQNSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKEWDL
                     FVERSTAYSNCYPYYVPDYATLRSLVASSGNLEFTQESFNWTGVAQDGSSSACRRGSV
                     KSFFSRLNWLYNLNSRYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTYLYAQAPGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDMLLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSISNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNYEGTGQAADLKSTQSAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945618.4a"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga ttttcgctca aaaacttccc
       61 gtaagtgaca acagcatggc aacgctgtgc ctgggacacc atgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgatcaaatt gaagtgacta atgctactga gctggtccag
      181 aattcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caaggaatgg
      301 gacctttttg ttgaacgaag cacagcttac agcaactgtt acccttatta tgtgccagat
      361 tatgccaccc ttaggtcact agttgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctctg cctgcagaag gggatctgtt
      481 aaaagtttct ttagtagatt gaattggttg tacaacttga attccaggta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaggacca aacctaccta tatgcccaag caccagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccaaatatcg ggtctagacc ctgggtaagg
      721 ggtgtatcca gcataataag catctattgg acgatagtaa aaccgggaga catgcttttg
      781 attaacagca cagggaatct aattgccccc cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatc gatgaatgca attctgaatg cattactcca
      901 aatggaagca tttccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaaacaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt atgaaggcac aggacaagca
     1141 gcagatctta aaagcactca atcagcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaat
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aatgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa aatcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 ttcttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672856	A/swine/Illinois/A02090639/2015 (A/H3N2) segment 4 (HA)	3125.7	0.000000e+00	1698/1701 (99%)
EPI653108	A/swine/Ilinois/A02090306/2015 (A/H3N2) segment 4 (HA)	3120.1	0.000000e+00	1697/1701 (99%)
EPI653105	A/swine/Ilinois/A02090378/2015 (A/H3N2) segment 4 (HA)	3120.1	0.000000e+00	1697/1701 (99%)
EPI596345	A/swine/Illinois/A01840991/2015 (A/H3N2) segment 4 (HA)	3120.1	0.000000e+00	1697/1701 (99%)
EPI671807	A/swine/Iowa/A02025916/2015 (A/H3N2) segment 4 (HA)	3109.0	0.000000e+00	1695/1701 (99%)
EPI584843	A/swine/Illinois/A01489882/2015 (A/H3N2) segment 4 (HA)	3105.3	0.000000e+00	1694/1701 (99%)
EPI539073	A/swine/Illinois/A01502060/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI539070	A/swine/Illinois/A01502049/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI539067	A/swine/Illinois/A01501987/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI532466	A/swine/Illinois/A01536079/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI505030	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI508905	A/swine/Illinois/A01411343/2014 (A/H0) segment 4 (HA)	3083.2	0.000000e+00	1690/1701 (99%)
EPI550287	A/swine/Illinois/A01502036/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI539076	A/swine/Illinois/A01502053/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI532469	A/swine/Illinois/A01536186/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI532463	A/swine/Illinois/A01536474/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI531035	A/swine/Illinois/A01475279/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI531026	A/swine/Illinois/A01475273/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI539079	A/swine/Illinois/A01502079/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI539064	A/swine/Illinois/A01502005/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI585999	A/swine/Illinois/A01462663/2015 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI467961	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI585990	A/swine/Illinois/A01462644/2015 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI584840	A/swine/Illinois/A01489869/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI545158	A/swine/Illinois/A00843206/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI573029	A/swine/Illinois/A01555050/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI544811	A/swine/Illinois/A01503899/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI492941	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI590653	A/swine/Illinois/A01841768/2015 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI586154	A/swine/Iowa/A01840866/2015 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI623663	A/swine/Illinois/A02024070/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI612726	A/swine/Illinois/A01847805/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI590534	A/swine/Illinois/A01820128/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI586044	A/swine/Illinois/A01478890/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1685/1702 (99%)
EPI559694	A/swine/Illinois/A01520758/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI487335	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397912	A/Indiana/114/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397211	A/Indiana/113/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1701 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397106	A/Indiana/115/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI397092	A/Indiana/57/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396246	A/Indiana/125/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI396230	A/Indiana/147/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395732	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI395725	A/swine/Indiana/A01104029/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395251	A/Indiana/152/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393298	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI392748	A/Wisconsin/22/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI392735	A/Pennsylvania/13/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI392708	A/Indiana/59/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1681/1702 (98%)
EPI392696	A/Indiana/43/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI392693	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI388362	A/Indiana/16/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI414156	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI397562	A/Wisconsin/29/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI397206	A/Ohio/34/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI396277	A/Indiana/135/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI396200	A/Ohio/79/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI394060	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI392711	A/Indiana/60/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1680/1702 (98%)
EPI392699	A/Indiana/46/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI388290	A/Indiana/17/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI493688	A/swine/Iowa/13E045/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446871	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446838	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443542	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443534	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443518	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443510	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI440751	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI433279	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1680/1702 (98%)
EPI426908	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI407279	A/Minnesota/18/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401687	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401676	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI400095	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398040	A/Ohio/57/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397654	A/Indiana/90/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397555	A/Ohio/86/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397404	A/Indiana/99/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396291	A/Ohio/63/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396239	A/Indiana/103/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395956	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395948	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395940	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395932	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395740	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394069	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394063	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI378523	A/Indiana/09/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI378515	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI378502	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392705	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1678/1701 (98%)
EPI392684	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1678/1701 (98%)
EPI397204	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI550135	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI509734	A/swine/Iowa/13H075/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI460974	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI400101	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397961	A/Ohio/88/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397759	A/Wisconsin/35/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397412	A/Michigan/16/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397388	A/Indiana/49/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395891	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395858	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395850	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395335	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1677/1701 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI394066	A/Indiana/60/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI393661	A/Ohio/62/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI392934	A/Minnesota/11/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1701 (98%)
EPI492947	A/swine/Iowa/A01365608/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI492437	A/swine/Iowa/A01364803/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI487879	A/swine/Iowa/A01365406/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI472195	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI472183	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI460375	A/swine/Indiana/A01260280/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI459618	A/swine/Michigan/A01432678/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI453566	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI446735	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI427184	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI406469	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI397677	A/Ohio/83/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI451222	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI612720	A/swine/Illinois/A01820364/2015 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI550128	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI550079	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI546878	A/swine/Ohio/13TOSU1560/2013 (A/H0) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI527985	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI600393	A/swine/Iowa/A01555010/2014 (A/H1N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI672955	A/swine/Iowa/A01795227/2015 (A/H1N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI620636	A/swine/Iowa/A02076564/2015 (A/H1N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI623673	A/swine/Iowa/A02076596/2015 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI573576	A/swine/Iowa/A01469372/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI542540	A/swine/Iowa/A01476152/2014 (A/H1N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI544936	A/swine/Iowa/13H091/2013 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI492376	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI489714	A/swine/Minnesota/A01394042/2013 (A/H1N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI574168	A/swine/Iowa/A01469493/2015 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI528420	A/swine/Texas/13TOSU6273/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI526954	A/swine/Texas/13TOSU6276/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506609	A/swine/Nebraska/A01490415/2014 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506603	A/swine/Nebraska/A01490535/2014 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506600	A/swine/Nebraska/A01490456/2014 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506597	A/swine/Nebraska/A01490540/2014 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506272	A/swine/Minnesota/A01395979/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI506263	A/swine/Minnesota/A01395969/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI505004	A/swine/Nebraska/A01490219/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI499931	A/swine/Iowa/13H072/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI499765	A/swine/Iowa/A01290752/2013 (A/H0) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460086	A/swine/Minnesota/A01380666/2013 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI558872	A/swine/Illinois/A01477750/2014 (A/H0) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI371322	A/swine/Minnesota/A01116842/2011 (A/H1N2) segment 6 (NA)	2484.9	0.000000e+00	1388/1410 (98%)
EPI476523	A/swine/Minnesota/A01398642/2013 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI384480	A/swine/Minnesota/A01116840/2011 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1386/1407 (98%)
EPI669317	A/swine/Indiana/14TOSU0028/2014 (A/H1N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1409 (98%)
EPI669300	A/swine/Indiana/14TOSU0032/2014 (A/H1N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1409 (98%)
EPI641453	A/swine/Minnesota/A01823149/2015 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI621571	A/swine/Iowa/A01822306/2015 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI621565	A/swine/Iowa/A01822318/2015 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI621562	A/swine/Iowa/A01822297/2015 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI620482	A/swine/Minnesota/A01847873/2015 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI600447	A/swine/Iowa/A01476909/2014 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI669698	A/swine/Ohio/14TOSU23771/2014 (A/H1N2) segment 6 (NA)	2457.2	0.000000e+00	1383/1409 (98%)
EPI669422	A/swine/Ohio/14TOSU23764/2014 (A/H1N2) segment 6 (NA)	2457.2	0.000000e+00	1383/1409 (98%)
EPI546931	A/swine/Indiana/A01260587/2014 (A/H1N2) segment 6 (NA)	2457.2	0.000000e+00	1383/1409 (98%)
EPI586051	A/swine/Nebraska/A01555575/2015 (A/H1N2) segment 6 (NA)	2455.3	0.000000e+00	1384/1411 (98%)
EPI584797	A/swine/Iowa/A01840985/2015 (A/H1N2) segment 6 (NA)	2444.2	0.000000e+00	1381/1410 (97%)
EPI391191	A/swine/Iowa/A01202677/2011 (A/H1N2) segment 6 (NA)	2435.0	0.000000e+00	1379/1410 (97%)
EPI623642	A/swine/Iowa/A02077617/2015 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI612569	A/swine/Iowa/A02076301/2015 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI584806	A/swine/Iowa/A01840987/2015 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI371332	A/swine/Minnesota/A01201294/2011 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI341743	A/swine/Iowa/A01202063/2011 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI338587	A/swine/Iowa/A01049863/2011 (A/H1N2) segment 6 (NA)	2433.2	0.000000e+00	1379/1410 (97%)
EPI371310	A/swine/Minnesota/A01047911/2010 (A/H1N2) segment 6 (NA)	2429.5	0.000000e+00	1378/1410 (97%)
EPI663372	A/swine/Iowa/A02025591/2015 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI559398	A/swine/Indiana/28-0202/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI559388	A/swine/Indiana/28-0210/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI559298	A/swine/Indiana/28-0223/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI399610	A/swine/Pennsylvania/A01076779/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI399563	A/swine/Pennsylvania/A01076777/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI391079	A/swine/Iowa/A01202576/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI391073	A/swine/Minnesota/A01202471/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI391052	A/swine/Iowa/A01202087/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI390950	A/swine/Ohio/A01049357/2010 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI384443	A/swine/Minnesota/A01116288/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1376/1407 (97%)
EPI384281	A/swine/Minnesota/A01047910/2010 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1376/1407 (97%)
EPI384278	A/swine/Minnesota/A01047909/2010 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1376/1407 (97%)
EPI371331	A/swine/Minnesota/A01201102/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI369160	A/swine/Illinois/A01134703/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI369159	A/swine/Illinois/A01134654/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI369156	A/swine/Illinois/A01134482/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI347612	A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI338586	A/swine/Iowa/A01049864/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI338584	A/swine/Iillinois/A01049872/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI338568	A/swine/Minnesota/A01049956/2011 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI317022	A/swine/Iowa/A01049071/2010 (A/H1N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI314799	A/swine/Pennsylvania/602170-3/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI314797	A/swine/Pennsylvania/602170-1/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI291871	A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI291869	A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)	2427.6	0.000000e+00	1378/1410 (97%)
EPI367693	A/swine/Minnesota/A01047500/2010 (A/H1N2) segment 6 (NA)	2423.9	0.000000e+00	1377/1410 (97%)
EPI653871	A/swine/Illinois/A00857134/2011 (A/H0) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI653860	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI653771	A/swine/Illinois/A00857129/2011 (A/H0) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI615601	A/swine/Iowa/A01202444/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI584491	A/swine/Michigan/A01202035/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI559340	A/swine/Indiana/28-0410/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1375/1407 (97%)
EPI559314	A/swine/Indiana/28-0415/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1375/1407 (97%)
EPI559310	A/swine/Indiana/28-0419/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1375/1407 (97%)
EPI415678	A/swine/Ohio/11SW195/2011 (A/H0) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI415266	A/swine/Ohio/11SW115/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI399584	A/swine/Minnesota/A01327667/2012 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391418	A/swine/Iowa/A01202879/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391384	A/swine/Iowa/A01202878/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391201	A/swine/Iowa/A01202747/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391200	A/swine/Iowa/A01202745/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391128	A/swine/Iowa/A01202639/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391122	A/swine/Iowa/A01202529/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391066	A/swine/Iowa/A01202443/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI391065	A/swine/Iowa/A01202442/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI390782	A/swine/Minnesota/A01076122/2010 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI384578	A/swine/Illinois/A01116719/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1375/1407 (97%)
EPI384530	A/swine/Illinois/A01134851/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1375/1407 (97%)
EPI371325	A/swine/Minnesota/A01134248/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI371324	A/swine/Minnesota/A01134236/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI369050	A/swine/Illinois/A00857138b/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI369039	A/swine/Illinois/A00857138a/2011 (A/H0) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI369024	A/swine/Illinois/A00857300/2011 (A/H0) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI367809	A/swine/Pennsylvania/A01047912/2010 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI351656	A/swine/Iowa/A01202640/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI341750	A/swine/Michigan/A01202036/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI341749	A/swine/Michigan/A01202037/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI338567	A/swine/Indiana/A01049964/2011 (A/H1N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI338447	A/swine/Indiana/A01049653/2011 (A/H3N2) segment 6 (NA)	2422.1	0.000000e+00	1377/1410 (97%)
EPI399602	A/swine/Illinois/A01240908/2012 (A/H3N2) segment 6 (NA)	2418.4	0.000000e+00	1376/1410 (97%)
EPI615608	A/swine/Illinois/A01047046/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI615557	A/swine/Illinois/A01047045/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI559278	A/swine/Indiana/28-0403/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI489142	A/swine/North Carolina/SG1391/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI461426	A/swine/Ohio/11SW233/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI461419	A/swine/Ohio/11SW149/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI461393	A/swine/Ohio/11SW208/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459606	A/swine/Ohio/11SW144/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459598	A/swine/Ohio/11SW121/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459590	A/swine/Ohio/11SW127/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459534	A/swine/Ohio/11SW349/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459495	A/swine/Ohio/11SW162/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459487	A/swine/Ohio/11SW133/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI459465	A/swine/Ohio/11SW344/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI453433	A/swine/Korea/D79/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415967	A/swine/Ohio/11SW347/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415831	A/swine/Ohio/11SW218/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415822	A/swine/Ohio/11SW217/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415797	A/swine/Ohio/11SW213/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415772	A/swine/Ohio/11SW209/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415713	A/swine/Ohio/11SW201/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415652	A/swine/Ohio/11SW189/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415642	A/swine/Ohio/11SW187/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415634	A/swine/Ohio/11SW186/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415626	A/swine/Ohio/11SW185/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415600	A/swine/Ohio/11SW180/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415565	A/swine/Ohio/11SW174/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415531	A/swine/Ohio/11SW170/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415523	A/swine/Ohio/11SW169/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415516	A/swine/Ohio/11SW168/2011 (A/H0) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415506	A/swine/Ohio/11SW166/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415490	A/swine/Ohio/11SW161/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415482	A/swine/Ohio/11SW146/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415474	A/swine/Ohio/11SW140/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415466	A/swine/Ohio/11SW139/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415458	A/swine/Ohio/11SW138/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415450	A/swine/Ohio/11SW137/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415442	A/swine/Ohio/11SW136/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415434	A/swine/Ohio/11SW135/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415426	A/swine/Ohio/11SW134/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415412	A/swine/Ohio/11SW132/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415404	A/swine/Ohio/11SW131/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415396	A/swine/Ohio/11SW130/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415388	A/swine/Ohio/11SW129/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415380	A/swine/Ohio/11SW128/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415372	A/swine/Ohio/11SW126/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415366	A/swine/Ohio/11SW125/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415358	A/swine/Ohio/11SW124/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415350	A/swine/Ohio/11SW123/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415342	A/swine/Ohio/11SW122/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415290	A/swine/Ohio/11SW87/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415274	A/swine/Ohio/11SW118/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI415234	A/swine/Ohio/11SW109/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI398914	A/swine/Illinois/A01134651/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391426	A/swine/Iowa/A01203126/2012 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391425	A/swine/Iowa/A01203125/2012 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391124	A/swine/Iowa/A01202573/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391090	A/swine/Indiana/A01202632/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391089	A/swine/Indiana/A01202631/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391074	A/swine/Minnesota/A01202472/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI390951	A/swine/Ohio/A01049382/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI384551	A/swine/Illinois/A01134656/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI384503	A/swine/Minnesota/A01134235/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI384500	A/swine/Minnesota/A01134221/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI384415	A/swine/Illinois/A01047397/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI384336	A/swine/Minnesota/A01116364/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1374/1407 (97%)
EPI371329	A/swine/Minnesota/A01134593/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI371323	A/swine/Minnesota/A01134226/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI369161	A/swine/Illinois/A01134715/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI369158	A/swine/Illinois/A01134653/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI369066	A/swine/Illinois/A00857304b/2012 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI369058	A/swine/Illinois/A00857304a/2012 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367700	A/swine/Illinois/A01047108/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367692	A/swine/Illinois/A01047363/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367691	A/swine/Illinois/A01047353/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367690	A/swine/Illinois/A01047348/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367689	A/swine/Illinois/A01047177/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367688	A/swine/Illinois/A01047172/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367687	A/swine/Illinois/A01047166/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367686	A/swine/Illinois/A01047162/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367685	A/swine/Illinois/A01047155/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367684	A/swine/Illinois/A01047153/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367683	A/swine/Illinois/A01047149/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367682	A/swine/Illinois/A01047145/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367681	A/swine/Illinois/A01047112/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367680	A/swine/Illinois/A01047099/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367679	A/swine/Illinois/A01047097/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367678	A/swine/Illinois/A01047089/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367677	A/swine/Illinois/A01047085/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367674	A/swine/Illinois/A01047042/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367673	A/swine/Illinois/A01047041/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367672	A/swine/Illinois/A01047024/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI367671	A/swine/Illinois/A01047020/2010 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI344396	A/Indiana/10/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI344388	A/Indiana/10/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338597	A/swine/Indiana/A01049744/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338596	A/swine/Indiana/A01049745/2011 (A/H3N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338590	A/swine/Indiana/A01049794/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338583	A/swine/Iowa/A01049887/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338451	A/swine/Iowa/A01049644/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI338449	A/swine/Iowa/A01049646/2011 (A/H1N2) segment 6 (NA)	2416.5	0.000000e+00	1376/1410 (97%)
EPI391051	A/swine/Iowa/A01202086/2011 (A/H1N2) segment 6 (NA)	2414.7	0.000000e+00	1375/1410 (97%)
EPI384302	A/swine/Minnesota/A01047499/2010 (A/H1N2) segment 6 (NA)	2414.7	0.000000e+00	1373/1406 (97%)
EPI341756	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 6 (NA)	2414.7	0.000000e+00	1375/1410 (97%)
EPI489072	A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 6 (NA)	2412.8	0.000000e+00	1374/1408 (97%)
EPI615550	A/swine/Illinois/A01047044/2010 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI506435	A/swine/Indiana/A00968332/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI492955	A/swine/Indiana/A00968349/2011 (A/H0) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI489086	A/swine/Arkansas/SG1378/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI461385	A/swine/Ohio/11SW238/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI459572	A/swine/Ohio/11SW230/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI459527	A/swine/Ohio/11SW177/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI459519	A/swine/Ohio/11SW223/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI457170	A/swine/Ohio/11SW208/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI453432	A/swine/Korea/A18/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI439894	A/swine/Wyoming/A01445305/2013 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415959	A/swine/Ohio/11SW240/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415951	A/swine/Ohio/11SW239/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415943	A/swine/Ohio/11SW237/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415935	A/swine/Ohio/11SW236/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415927	A/swine/Ohio/11SW235/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415919	A/swine/Ohio/11SW234/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415911	A/swine/Ohio/11SW232/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415905	A/swine/Ohio/11SW231/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415897	A/swine/Ohio/11SW229/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415889	A/swine/Ohio/11SW228/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415881	A/swine/Ohio/11SW227/2011 (A/H0) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415872	A/swine/Ohio/11SW226/2011 (A/H0) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415863	A/swine/Ohio/11SW225/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415854	A/swine/Ohio/11SW224/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415847	A/swine/Ohio/11SW221/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415839	A/swine/Ohio/11SW220/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415813	A/swine/Ohio/11SW216/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415805	A/swine/Ohio/11SW215/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415788	A/swine/Ohio/11SW211/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415780	A/swine/Ohio/11SW210/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415746	A/swine/Ohio/11SW205/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415738	A/swine/Ohio/11SW204/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415721	A/swine/Ohio/11SW202/2011 (A/H1N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415694	A/swine/Ohio/11SW197/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415660	A/swine/Ohio/11SW191/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)
EPI415608	A/swine/Ohio/11SW183/2011 (A/H3N2) segment 6 (NA)	2411.0	0.000000e+00	1375/1410 (97%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI542541	A/swine/Iowa/A01476152/2014 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI623674	A/swine/Iowa/A02076596/2015 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573575	A/swine/Iowa/A01469372/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI600394	A/swine/Iowa/A01555010/2014 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI545784	A/swine/California/A00968949/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI533963	A/swine/Iowa/A01481390/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI531628	A/swine/Illinois/A01509209/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI531622	A/swine/Illinois/A01509203/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI531616	A/swine/Illinois/A01509186/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI516839	A/Iowa/04/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI504872	A/swine/Iowa/A01290867/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI473816	A/swine/Iowa/A01290302/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI468629	A/swine/Maryland/A01319694/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI467729	A/swine/Ohio/A01351710/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI467726	A/swine/Ohio/A01351683/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1762.8	0.000000e+00	972/981 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI568686	A/swine/Illinois/A01462285/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492406	A/swine/Iowa/A01290468/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398039	A/West Virginia/09/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398038	A/Ohio/38/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397940	A/Ohio/81/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397921	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397746	A/Ohio/87/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397558	A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI397543	A/Ohio/83/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397527	A/Ohio/47/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397519	A/Ohio/44/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397499	A/Indiana/104/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397399	A/Indiana/99/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397380	A/Indiana/138/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397373	A/Indiana/123/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397218	A/Indiana/144/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397087	A/Indiana/52/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396287	A/Ohio/57/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396282	A/Ohio/43/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396273	A/Indiana/135/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396257	A/Indiana/127/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396249	A/Indiana/126/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396236	A/Indiana/103/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396216	A/Indiana/150/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396178	A/Indiana/77/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395966	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395951	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395943	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395935	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395922	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395894	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395861	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395853	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395743	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395720	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395713	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395262	A/Ohio/65/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395246	A/Indiana/152/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394935	A/Ohio/75/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394072	A/Wisconsin/27/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394064	A/Indiana/60/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394061	A/Indiana/21/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394058	A/Indiana/38/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393691	A/West Virginia/16/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393677	A/West Virginia/10/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393658	A/Ohio/62/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393514	A/Indiana/65/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393506	A/Ohio/52/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI393302	A/Indiana/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392697	A/Indiana/46/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392694	A/Indiana/43/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392692	A/Indiana/38/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392680	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392679	A/Ohio/17/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI392676	A/Ohio/13/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388364	A/Ohio/17/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388359	A/Indiana/16/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388355	A/Indiana/21/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388349	A/Indiana/20/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388342	A/Indiana/15/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388335	A/Ohio/16/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388328	A/Ohio/20/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI388315	A/Ohio/20/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI383550	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI378518	A/Indiana/09/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI378510	A/Indiana/07/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI347605	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI392703	A/Indiana/52/2012 (A/H3N2) segment 7 (MP)	1755.4	0.000000e+00	970/980 (98%)
EPI388308	A/Ohio/15/2012 (A/H3N2) segment 7 (MP)	1755.4	0.000000e+00	970/980 (98%)
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI600384	A/swine/Illinois/A01476977/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI593912	A/swine/Illinois/A01840376/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)

niman · December 17, 2015

LOCUS       KU143661                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Illinois/A01945691/2015(H3N2)) segment 4
            hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143661
VERSION     KU143661.1  GI:960313745
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Illinois/A01945691/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Illinois/A01945691/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Illinois/A01945691/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Illinois/A01945691/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755967"
                     /segment="4"
                     /country="USA: Illinois"
                     /collection_date="19-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83280.1"
                     /db_xref="GI:960313746"
                     /translation="MKTIIAFSCILCLIFAQKLPVSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQNSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKEWDL
                     FVERSTAYSNCYPYYVPDYATLRSLVASSGNLEFTQESFNWTGVAQDGSSSACRRGSV
                     KSFFSRLNWLYNLNSRYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQIYLYAQAPGRV
                     IVSTKRSQQTVIPNIGSRPWVRGISSIISIYWTIVKPGDMLLINSTGNLIAPRGYFKI
                     KSGKSSIMRSDAHIDECNSECITPNGSISNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNYEGTGQAADLKSTQSAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945691.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga ttttcgctca aaaacttccc
       61 gtaagtgaca acagcatggc aacgctgtgc ctgggacacc atgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgatcaaatt gaagtgacta atgctactga gctggtccag
      181 aattcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caaggaatgg
      301 gacctttttg ttgaacgaag cacagcttac agcaactgtt acccttatta tgtgccagat
      361 tatgccaccc ttaggtcact agttgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctctg cctgcagaag gggatctgtt
      481 aaaagtttct ttagtagatt gaattggttg tacaacttga attccaggta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaggacca aatctaccta tatgcccaag caccagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtatatcca gcataataag catctattgg acgatagtaa aaccgggaga catgcttttg
      781 attaacagca cagggaatct aattgccccc cggggttact tcaaaataaa aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca tttccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaaacaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt atgaaggcac aggacaagca
     1141 gcagatctta aaagcactca atcagcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaat
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aatgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa aatcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 ttcttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672856	A/swine/Illinois/A02090639/2015 (A/H3N2) segment 4 (HA)	3120.1	0.000000e+00	1697/1701 (99%)
EPI653108	A/swine/Ilinois/A02090306/2015 (A/H3N2) segment 4 (HA)	3114.6	0.000000e+00	1696/1701 (99%)
EPI653105	A/swine/Ilinois/A02090378/2015 (A/H3N2) segment 4 (HA)	3114.6	0.000000e+00	1696/1701 (99%)
EPI596345	A/swine/Illinois/A01840991/2015 (A/H3N2) segment 4 (HA)	3114.6	0.000000e+00	1696/1701 (99%)
EPI671807	A/swine/Iowa/A02025916/2015 (A/H3N2) segment 4 (HA)	3103.5	0.000000e+00	1694/1701 (99%)
EPI584843	A/swine/Illinois/A01489882/2015 (A/H3N2) segment 4 (HA)	3099.8	0.000000e+00	1693/1701 (99%)
EPI539073	A/swine/Illinois/A01502060/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI539070	A/swine/Illinois/A01502049/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI539067	A/swine/Illinois/A01501987/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI532466	A/swine/Illinois/A01536079/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI505030	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI508905	A/swine/Illinois/A01411343/2014 (A/H0) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI550287	A/swine/Illinois/A01502036/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI539076	A/swine/Illinois/A01502053/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI532469	A/swine/Illinois/A01536186/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI532463	A/swine/Illinois/A01536474/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI531035	A/swine/Illinois/A01475279/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI531026	A/swine/Illinois/A01475273/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI539079	A/swine/Illinois/A01502079/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI539064	A/swine/Illinois/A01502005/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI585999	A/swine/Illinois/A01462663/2015 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI467961	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI585990	A/swine/Illinois/A01462644/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI584840	A/swine/Illinois/A01489869/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545158	A/swine/Illinois/A00843206/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI573029	A/swine/Illinois/A01555050/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI544811	A/swine/Illinois/A01503899/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI492941	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI590653	A/swine/Illinois/A01841768/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1701 (98%)
EPI586154	A/swine/Iowa/A01840866/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1701 (98%)
EPI623663	A/swine/Illinois/A02024070/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI612726	A/swine/Illinois/A01847805/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI590534	A/swine/Illinois/A01820128/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI586044	A/swine/Illinois/A01478890/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1684/1702 (98%)
EPI559694	A/swine/Illinois/A01520758/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI487335	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397912	A/Indiana/114/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397211	A/Indiana/113/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI395251	A/Indiana/152/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI393298	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392748	A/Wisconsin/22/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392735	A/Pennsylvania/13/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392696	A/Indiana/43/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392693	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI388362	A/Indiana/16/2012 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI392684	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1678/1701 (98%)
EPI414156	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI397562	A/Wisconsin/29/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI397206	A/Ohio/34/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI396277	A/Indiana/135/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI396200	A/Ohio/79/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI394060	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI392699	A/Indiana/46/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI388290	A/Indiana/17/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI493688	A/swine/Iowa/13E045/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI446871	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI446838	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443542	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443534	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443518	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI443510	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI440751	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI433279	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI426908	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI407279	A/Minnesota/18/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI401687	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI401676	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI400095	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI398040	A/Ohio/57/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397654	A/Indiana/90/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397555	A/Ohio/86/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI397404	A/Indiana/99/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI396291	A/Ohio/63/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI396239	A/Indiana/103/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395956	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395948	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395940	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395932	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI395740	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI394069	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI394063	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI378523	A/Indiana/09/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI378515	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI378502	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI392705	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI397204	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1701 (98%)
EPI550135	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI509734	A/swine/Iowa/13H075/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI460974	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI400101	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI397961	A/Ohio/88/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI397759	A/Wisconsin/35/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI397412	A/Michigan/16/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI397106	A/Indiana/115/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI397092	A/Indiana/57/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI396246	A/Indiana/125/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI396230	A/Indiana/147/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI395891	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI395858	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI395850	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI395843	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI395732	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI395725	A/swine/Indiana/A01104029/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI395335	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1676/1701 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI393661	A/Ohio/62/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI392708	A/Indiana/59/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1678/1702 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI392934	A/Minnesota/11/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI392711	A/Indiana/60/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1677/1702 (98%)
EPI492947	A/swine/Iowa/A01365608/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI492437	A/swine/Iowa/A01364803/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI487879	A/swine/Iowa/A01365406/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI472195	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI472183	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI460375	A/swine/Indiana/A01260280/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI459618	A/swine/Michigan/A01432678/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI453566	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI446735	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI427184	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI406469	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI397677	A/Ohio/83/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI451222	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI612720	A/swine/Illinois/A01820364/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI550128	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI550079	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI546878	A/swine/Ohio/13TOSU1560/2013 (A/H0) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI527985	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI527981	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI596346	A/swine/Illinois/A01840991/2015 (A/H3N2) segment 6 (NA)	2577.2	0.000000e+00	1405/1410 (99%)
EPI584844	A/swine/Illinois/A01489882/2015 (A/H3N2) segment 6 (NA)	2577.2	0.000000e+00	1405/1410 (99%)
EPI584818	A/swine/Illinois/A02077009/2015 (A/H1N2) segment 6 (NA)	2577.2	0.000000e+00	1405/1410 (99%)
EPI590783	A/swine/Missouri/A01554320/2015 (A/H0) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI672858	A/swine/Illinois/A02090639/2015 (A/H3N2) segment 6 (NA)	2566.1	0.000000e+00	1403/1410 (99%)
EPI653110	A/swine/Ilinois/A02090306/2015 (A/H3N2) segment 6 (NA)	2566.1	0.000000e+00	1403/1410 (99%)
EPI550288	A/swine/Illinois/A01502036/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI539074	A/swine/Illinois/A01502060/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI539071	A/swine/Illinois/A01502049/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI539068	A/swine/Illinois/A01501987/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI531036	A/swine/Illinois/A01475279/2014 (A/H3N2) segment 6 (NA)	2556.9	0.000000e+00	1401/1410 (99%)
EPI531027	A/swine/Illinois/A01475273/2014 (A/H3N2) segment 6 (NA)	2556.9	0.000000e+00	1401/1410 (99%)
EPI671808	A/swine/Iowa/A02025916/2015 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI653107	A/swine/Ilinois/A02090378/2015 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI544812	A/swine/Illinois/A01503899/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI539077	A/swine/Illinois/A01502053/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI532471	A/swine/Illinois/A01536186/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI532468	A/swine/Illinois/A01536079/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI532465	A/swine/Illinois/A01536474/2014 (A/H3N2) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI508906	A/swine/Illinois/A01411343/2014 (A/H0) segment 6 (NA)	2555.0	0.000000e+00	1401/1410 (99%)
EPI623664	A/swine/Illinois/A02024070/2015 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI584841	A/swine/Illinois/A01489869/2014 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI573030	A/swine/Illinois/A01555050/2014 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI539080	A/swine/Illinois/A01502079/2014 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI539065	A/swine/Illinois/A01502005/2014 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI505031	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI586001	A/swine/Illinois/A01462663/2015 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI585992	A/swine/Illinois/A01462644/2015 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI586045	A/swine/Illinois/A01478890/2015 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI545159	A/swine/Illinois/A00843206/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI612727	A/swine/Illinois/A01847805/2015 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI590654	A/swine/Illinois/A01841768/2015 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI586155	A/swine/Iowa/A01840866/2015 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI559696	A/swine/Illinois/A01520758/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI590536	A/swine/Illinois/A01820128/2015 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI492943	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI487337	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI612722	A/swine/Illinois/A01820364/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI550081	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI546918	A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI546892	A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527842	A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527152	A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527135	A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527073	A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527050	A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527008	A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI527002	A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI526977	A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI526940	A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI526912	A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI468208	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI468200	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI467963	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI465419	A/Indiana/17/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI465390	A/Indiana/09/2013 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI573715	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1395/1412 (98%)
EPI550067	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI549962	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI528458	A/swine/Indiana/13TOSU1143/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI528455	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI528426	A/swine/Indiana/13TOSU1149/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI528423	A/swine/Indiana/13TOSU1144/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527994	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527945	A/swine/Indiana/13TOSU1151/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527898	A/swine/Indiana/13TOSU1145/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527846	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527158	A/swine/Indiana/13TOSU1158/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527087	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI527062	A/swine/Indiana/13TOSU1160/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI526965	A/swine/Indiana/13TOSU1142/2013 (A/H1N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI465387	A/Indiana/10/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI391438	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI550032	A/swine/Indiana/13TOSU5248/2013 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI544929	A/swine/Iowa/13H098/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI544922	A/swine/Iowa/13H090/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI538984	A/swine/Iowa/13H092/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI538970	A/swine/Iowa/13H076/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI510221	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI501537	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI472211	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI466705	A/Indiana/05/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI465384	A/Indiana/07/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI465381	A/Indiana/05/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI464502	A/Indiana/04/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI464499	A/Indiana/05/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI463709	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI460976	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393915	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI597641	A/swine/Iowa/A01476877/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI597635	A/swine/Iowa/A01476878/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550223	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550172	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550130	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550116	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550102	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI550060	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI547391	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI547380	A/swine/Indiana/13TOSU1986/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI547369	A/swine/Indiana/13TOSU1983/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI546905	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI546886	A/swine/Ohio/13TOSU1560/2013 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI538977	A/swine/Iowa/13H073/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI538963	A/swine/Iowa/13H065/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI538918	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI528415	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI527990	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI527983	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI527092	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI526922	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI505060	A/swine/Illinois/A01409639/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI492998	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI492968	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI487344	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI485990	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI485982	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI482816	A/Indiana/21/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433281	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI653109	A/swine/Ilinois/A02090306/2015 (A/H3N2) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI596347	A/swine/Illinois/A01840991/2015 (A/H3N2) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI584819	A/swine/Illinois/A02077009/2015 (A/H1N2) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI672857	A/swine/Illinois/A02090639/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI671809	A/swine/Iowa/A02025916/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI653106	A/swine/Ilinois/A02090378/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI584848	A/swine/Illinois/A01489871/2014 (A/H1N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550289	A/swine/Illinois/A01502036/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539081	A/swine/Illinois/A01502079/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539078	A/swine/Illinois/A01502053/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539075	A/swine/Illinois/A01502060/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539072	A/swine/Illinois/A01502049/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539069	A/swine/Illinois/A01501987/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI539066	A/swine/Illinois/A01502005/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI532470	A/swine/Illinois/A01536186/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI532467	A/swine/Illinois/A01536079/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI532464	A/swine/Illinois/A01536474/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI531037	A/swine/Illinois/A01475279/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI531028	A/swine/Illinois/A01475273/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI505032	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI584845	A/swine/Illinois/A01489882/2015 (A/H3N2) segment 7 (MP)	1801.6	0.000000e+00	979/982 (99%)
EPI585991	A/swine/Illinois/A01462644/2015 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI584842	A/swine/Illinois/A01489869/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI584801	A/swine/Illinois/A02077016/2015 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI559695	A/swine/Illinois/A01520758/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI544813	A/swine/Illinois/A01503899/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI586156	A/swine/Iowa/A01840866/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI586000	A/swine/Illinois/A01462663/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI545160	A/swine/Illinois/A00843206/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI612721	A/swine/Illinois/A01820364/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573031	A/swine/Illinois/A01555050/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI487336	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI672864	A/swine/Iowa/A01940296/2015 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI653994	A/swine/Iowa/A01940123/2015 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI623665	A/swine/Illinois/A02024070/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI593952	A/swine/Minnesota/A01567878/2015 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI590535	A/swine/Illinois/A01820128/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI586046	A/swine/Illinois/A01478890/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI568817	A/swine/Minnesota/A01567359/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI558117	A/Minnesota/33/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492942	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI590655	A/swine/Illinois/A01841768/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1773.9	0.000000e+00	974/981 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1772.1	0.000000e+00	974/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI568686	A/swine/Illinois/A01462285/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	975/983 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	970/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)

niman · December 17, 2015

LOCUS       KU171022                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Illinois/A02090984/2015(H3N2)) segment 4
            hemagglutinin (HA) gene, complete cds.
ACCESSION   KU171022
VERSION     KU171022.1  GI:960313167
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Illinois/A02090984/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Illinois/A02090984/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  CONSRTM   USDA Swine Surveillance
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2015) National Veterinary Services Laboratories,
            USDA, 1920 Dayton Ave, Ames, IA 50010, USA
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Illinois/A02090984/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Illinois/A02090984/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1758729"
                     /segment="4"
                     /country="USA"
                     /collection_date="12-Oct-2015"
                     /note="passage details: P1"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83160.1"
                     /db_xref="GI:960313168"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGSMEFTQESFNWTGVAQDGSSYACRRGSV
                     NSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKGSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacatc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg taaaaattgc
      241 acactgatag atgctctatt gggggaccct cactgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcagca tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aacagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtgagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtggaaaa
      841 ggctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtga acaagatcac atatggagca
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa gtttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgagaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3088.7	0.000000e+00	1691/1700 (99%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3088.7	0.000000e+00	1691/1700 (99%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1700 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1688/1700 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3068.4	0.000000e+00	1687/1700 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1700 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1700 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1700 (99%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1700 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1700 (99%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1700 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1700 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1700 (99%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3051.8	0.000000e+00	1684/1700 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3051.8	0.000000e+00	1684/1700 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3051.8	0.000000e+00	1684/1700 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1700 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1683/1700 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1700 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3044.4	0.000000e+00	1683/1700 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1700 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1700 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1682/1700 (98%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1682/1700 (98%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1682/1700 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1683/1701 (98%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1700 (98%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3035.2	0.000000e+00	1681/1700 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3035.2	0.000000e+00	1680/1699 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1700 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1700 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1700 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1700 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1700 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1700 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1681/1702 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1700 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1700 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1700 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1700 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1700 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3018.5	0.000000e+00	1678/1700 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1700 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1677/1700 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1677/1700 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1677/1700 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3013.0	0.000000e+00	1677/1700 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1700 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1700 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1700 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3007.5	0.000000e+00	1675/1698 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3007.5	0.000000e+00	1676/1700 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3007.5	0.000000e+00	1676/1700 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1677/1701 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1700 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1675/1700 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1675/1700 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3001.9	0.000000e+00	1675/1700 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3001.9	0.000000e+00	1675/1700 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1676/1702 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1676/1702 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1676/1702 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1676/1702 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1674/1700 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1675/1702 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1700 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1700 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1700 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1673/1702 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1673/1702 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1674/1703 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1674/1703 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI642512	A/Michigan/39/2015 (A/H3N2) segment 6 (NA)	2582.7	0.000000e+00	1406/1410 (99%)
EPI663317	A/swine/Illinois/A01770246/2015 (A/H3N2) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI645060	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI586039	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 6 (NA)	2549.5	0.000000e+00	1400/1410 (99%)
EPI584735	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI538991	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI671793	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI573052	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545853	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI597689	A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI590498	A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545881	A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545777	A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI542568	A/swine/South Dakota/A01482581/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI531098	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI597692	A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI538921	A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI600310	A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI558899	A/swine/Iowa/A01566473/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI600302	A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI586063	A/swine/Iowa/A01478820/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI573573	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI508859	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI623636	A/swine/Iowa/A02077681/2015 (A/H1N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510215	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510200	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510191	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI510174	A/swine/Illinois/A01411461/2014 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI492943	A/swine/Iowa/A01365015/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI590795	A/swine/Illinois/A01470861/2015 (A/H1N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI487337	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI467963	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI465387	A/Indiana/10/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI586093	A/swine/Minnesota/A01489541/2015 (A/H1N2) segment 6 (NA)	2468.2	0.000000e+00	1386/1411 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2468.2	0.000000e+00	1385/1410 (98%)
EPI641618	A/swine/Illinois/A02024907/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI621372	A/swine/Illinois/A01820488/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI612719	A/swine/Illinois/A01820457/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI612549	A/swine/Illinois/A01471010/2015 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI597683	A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI573470	A/swine/Iowa/A01840226/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI550081	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546918	A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546892	A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527842	A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527152	A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527135	A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527073	A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527050	A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527008	A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527002	A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526977	A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526940	A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526912	A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI505031	A/swine/Illinois/A01409735/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI501537	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468208	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468200	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI465419	A/Indiana/17/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI460976	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443111	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443101	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443098	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI424075	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI669181	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI600387	A/swine/Indiana/A01477819/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI572999	A/swine/Arkansas/A01840027/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI669717	A/swine/Indiana/14TOSU0001/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669714	A/swine/Ohio/14TOSU0158/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669687	A/swine/Ohio/14TOSU0566/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669679	A/swine/Indiana/14TOSU8050/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669678	A/swine/Indiana/14TOSU0342/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669663	A/swine/Ohio/14TOSU21817/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669653	A/swine/Indiana/14TOSU8041/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669637	A/swine/Ohio/14TOSU0422/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669633	A/swine/Ohio/14TOSU0463/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669624	A/swine/Ohio/14TOSU21811/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669608	A/swine/Ohio/14TOSU0563/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669591	A/swine/Indiana/14TOSU0011/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669541	A/swine/Ohio/14TOSU0435/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669531	A/swine/Ohio/14TOSU21800/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669469	A/swine/Indiana/14TOSU0343/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669423	A/swine/Ohio/14TOSU21805/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669419	A/swine/Ohio/14TOSU21815/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669407	A/swine/Indiana/14TOSU0235/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669397	A/swine/Indiana/14TOSU3013/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669396	A/swine/Indiana/14TOSU8019/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669387	A/swine/Ohio/14TOSU21806/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669386	A/swine/Ohio/14TOSU21808/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669364	A/swine/Indiana/14TOSU0374/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669330	A/swine/Ohio/14TOSU0143/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669327	A/swine/Indiana/14TOSU0226/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669324	A/swine/Indiana/14TOSU0231/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669319	A/swine/Indiana/14TOSU2891/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669315	A/swine/Ohio/14TOSU21839/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669311	A/swine/Ohio/14TOSU21812/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669307	A/swine/Ohio/14TOSU21816/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669304	A/swine/Ohio/14TOSU21801/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI669301	A/swine/Indiana/14TOSU0364/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620531	A/swine/Minnesota/A01847108/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620495	A/swine/Iowa/A02077555/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI590775	A/swine/South Dakota/A01841915/2015 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568724	A/swine/Arkansas/A01840187/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568718	A/swine/Illinois/A01555180/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI568688	A/swine/Arkansas/A01840185/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI546925	A/swine/North Dakota/A01104084/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545812	A/swine/Indiana/A01476391/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545372	A/swine/Iowa/A01476238/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545270	A/swine/Minnesota/A01565076/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545142	A/swine/Indiana/A01260591/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544948	A/swine/Minnesota/A01503773/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544945	A/swine/Minnesota/A01503777/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544942	A/swine/Minnesota/A01503779/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI544810	A/swine/Minnesota/A01503781/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI620592	A/swine/Illinois/A02076652/2015 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI600463	A/swine/Illinois/A01555038/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI573483	A/swine/Arkansas/A01840240/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI573465	A/swine/Arkansas/A01555210/2014 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI669694	A/swine/Ohio/14TOSU0133/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669667	A/swine/Ohio/14TOSU21818/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669455	A/swine/Indiana/14TOSU0006/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI669295	A/swine/Ohio/14TOSU0122/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI641460	A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI623677	A/swine/Illinois/A01554952/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI586105	A/swine/Iowa/A01470314/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545830	A/swine/Iowa/A01476395/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545775	A/swine/Minnesota/A01565290/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI533920	A/swine/Iowa/A01481221/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI620625	A/swine/Arkansas/A01554688/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI597651	A/swine/Iowa/A01476858/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573343	A/swine/Minnesota/A01567014/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI548243	A/swine/Iowa/A01476456/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI347605	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI663342	A/swine/Iowa/A01769394/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI623680	A/swine/Iowa/A01822197/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI621569	A/swine/Iowa/A01822175/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI621548	A/swine/Iowa/A01822205/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI620471	A/swine/Iowa/A01847871/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612503	A/swine/Minnesota/A01847477/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI612494	A/swine/Minnesota/A01847455/2015 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI449017	A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI433321	A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI427146	A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI427131	A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI406513	A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI399472	A/swine/North Carolina/A01300820/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI395845	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI391459	A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI390675	A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI383548	A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI347602	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346435	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346427	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI346419	A/Iowa/09/2011 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI341736	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI539162	A/Ohio/02/2014 (A/H3N2) segment 7 (MP)	1766.5	0.000000e+00	966/971 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI472194	A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461427	A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461420	A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI461386	A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459607	A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459599	A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459591	A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459573	A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459535	A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459520	A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459499	A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459488	A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI459466	A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457158	A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457150	A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457142	A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457134	A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457126	A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI457118	A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI453430	A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI441649	A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433310	A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415974	A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415966	A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415958	A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415950	A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415942	A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415926	A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415918	A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415904	A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415896	A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415888	A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415880	A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415871	A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415862	A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415853	A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415846	A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415838	A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415830	A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415812	A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415804	A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415796	A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415779	A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415771	A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415762	A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415745	A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415737	A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415720	A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415685	A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415617	A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415573	A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415556	A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415548	A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415497	A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415481	A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415473	A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415465	A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415457	A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415449	A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415441	A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415433	A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415425	A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415415	A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415411	A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415403	A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415395	A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415387	A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415379	A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415371	A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415365	A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415357	A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415349	A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415341	A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415313	A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415289	A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415257	A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415249	A/swine/Ohio/11SW113/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415241	A/swine/Ohio/11SW112/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI415225	A/swine/Ohio/11SW108/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI408330	A/swine/Indiana/A01432188/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI406668	A/swine/Iowa/A01203977/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397414	A/Michigan/23/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI397342	A/Michigan/19/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395346	A/Michigan/20/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395287	A/Illinois/11/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391144	A/swine/Indiana/A01202621/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391142	A/swine/Indiana/A01202632/2011 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390882	A/swine/Michigan/A01203374/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390881	A/swine/Indiana/A01203372/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI390671	A/swine/Indiana/A01243255/2012 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI388330	A/Utah/10/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433327	A/swine/Wyoming/A01444566/2013 (A/H3N2) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI620604	A/swine/Iowa/A02076786/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584851	A/swine/Nebraska/A01489870/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584830	A/swine/Nebraska/A01489868/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI541963	A/Ohio/4319/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	962/967 (99%)
EPI539063	A/swine/Nebraska/A01501767/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI532390	A/swine/Illinois/A01411761/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527873	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI527116	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI526872	A/swine/Minnesota/A01480518/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505095	A/swine/Nebraska/A01409647/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI501539	A/swine/South Dakota/A01366063/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI499646	A/swine/Iowa/A01290671/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492657	A/swine/Nebraska/A01394342/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492356	A/swine/Indiana/A00968365/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI487955	A/swine/Indiana/A01260366/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI487944	A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI476530	A/swine/Illinois/A01398587/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI472154	A/swine/Wyoming/A01397389/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI467890	A/swine/Nebraska/A01397576/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI461446	A/swine/Wyoming/A01381202/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI453429	A/swine/Korea/A18/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451185	A/swine/Pennsylvania/A01432652/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451178	A/swine/Wyoming/A01379327/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451175	A/swine/Wyoming/A01379354/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI438228	A/swine/Indiana/A01260209/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI427201	A/swine/Indiana/A01260183/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI416865	A/swine/Iowa/A01432207/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI415934	A/swine/Ohio/11SW236/2011 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI415703	A/swine/Ohio/11SW200/2011 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401145	A/swine/North Carolina/A01270509/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI399378	A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)

October 2015 Illinois Swine Match 2012 Cases

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