October 2015 Minnesota Swine Match 2012 Cases

niman · December 17, 2015

USDA releases 2015 Minnesota swine sequences that match 2012 cases.

niman · December 17, 2015

LOCUS       KU143604                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Minnesota/A01940765/2015(H3N2)) segment
            4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143604
VERSION     KU143604.1  GI:960313322
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Minnesota/A01940765/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Minnesota/A01940765/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  CONSRTM   Swine Surveillance
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2015) NAHLN Voluntary Swine Influenza
            Surveillance, USDA, 1920 Dayton Ave., Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Minnesota/A01940765/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Minnesota/A01940765/2015"
                     /serotype="H3N2"
                     /host="swine"
                     /db_xref="taxon:1755915"
                     /segment="4"
                     /country="USA: Minnesota"
                     /collection_date="19-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83204.1"
                     /db_xref="GI:960313323"
                     /translation="MKTIIAFSCVLCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRDSV
                     NSFFSRLNWLHNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPDGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMNKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     SEALNNRFQIKGIQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01940765.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcgtt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgata acagcatggc aacgctgtgc ctaggacacc acgcagtacc aaacggaaca
      121 ttagtgaaaa caatcacgga tgatcaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa ttcttgatgg aaaaaattgc
      241 acattgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac tcaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag ggattctgtt
      481 aacagtttct ttagtagatt gaattggttg cataacttaa attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtgtttcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca caggaaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaatca tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 gatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 aacaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga tatgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatggc
     1501 acttatgacc atgatatata cagaagcgag gcattaaata atcggttcca gatcaaaggt
     1561 attcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672996	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 4 (HA)	3142.3	0.000000e+00	1701/1701 (100%)
EPI669262	A/swine/Minnesota/A01940153/2015 (A/H3N2) segment 4 (HA)	3131.2	0.000000e+00	1699/1701 (99%)
EPI669264	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 4 (HA)	3129.3	0.000000e+00	1698/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1677/1702 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3001.9	0.000000e+00	1674/1699 (98%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1675/1702 (98%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1674/1701 (98%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1671/1701 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1669/1698 (98%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	2950.2	0.000000e+00	1666/1701 (97%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2942.8	0.000000e+00	1665/1701 (97%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2941.0	0.000000e+00	1664/1700 (97%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1663/1699 (97%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1701 (97%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672997	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 6 (NA)	2604.9	0.000000e+00	1410/1410 (100%)
EPI669265	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 6 (NA)	2593.8	0.000000e+00	1408/1410 (99%)
EPI669263	A/swine/Minnesota/A01940153/2015 (A/H3N2) segment 6 (NA)	2593.8	0.000000e+00	1408/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1391/1411 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI573600	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2490.4	0.000000e+00	1389/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573810	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2484.9	0.000000e+00	1388/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI647585	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI641459	A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI597662	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI597656	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1390/1412 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI545417	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1389/1411 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI488006	A/swine/USA/A01291038/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI440750	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2481.2	0.000000e+00	1385/1406 (98%)
EPI663314	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI557543	A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1375/1392 (98%)
EPI557533	A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1375/1392 (98%)
EPI545859	A/swine/North Carolina/A01476419/2014 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1389/1412 (98%)
EPI510221	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI487337	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI502748	A/swine/USA/A01409276/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1796.1	0.000000e+00	978/981 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI530308	A/swine/North Carolina/A01410321/2014 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	974/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI415265	A/swine/Ohio/11SW115/2011 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398039	A/West Virginia/09/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398038	A/Ohio/38/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397940	A/Ohio/81/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397921	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397746	A/Ohio/87/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397558	A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397543	A/Ohio/83/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397527	A/Ohio/47/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397519	A/Ohio/44/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397499	A/Indiana/104/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397399	A/Indiana/99/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)

niman · December 17, 2015

LOCUS       KU143598                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/Minnesota/A01940814/2015(H3N2)) segment
            4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143598
VERSION     KU143598.1  GI:960313291
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/Minnesota/A01940814/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/Minnesota/A01940814/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  CONSRTM   Swine Surveillance
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2015) NAHLN Voluntary Swine Influenza
            Surveillance, USDA, 1920 Dayton Ave., Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus
                     (A/swine/Minnesota/A01940814/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Minnesota/A01940814/2015"
                     /serotype="H3N2"
                     /host="swine"
                     /db_xref="taxon:1755916"
                     /segment="4"
                     /country="USA: Minnesota"
                     /collection_date="19-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83196.1"
                     /db_xref="GI:960313292"
                     /translation="MKTIIAFSCVLCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRDSV
                     NSFFSRLNWLHNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPDGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMNKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     SEALNNRFQIKGIQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01940814.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcgtt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgata acagcatggc aacgctgtgc ctaggacacc acgcagtacc aaacggaaca
      121 ttagtgaaaa caatcacgga tgatcaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa ttcttgatgg aaaaaattgc
      241 acattgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac tcaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag ggattctgtt
      481 aacagtttct ttagtagatt gaattggttg cataacttaa attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtgtttcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca caggaaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaatca tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 gatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 aacaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga tatgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatggc
     1501 acttatgacc atgatatata cagaagcgag gcattaaata atcggttcca gatcaaaggt
     1561 attcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672996	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 4 (HA)	3142.3	0.000000e+00	1701/1701 (100%)
EPI669262	A/swine/Minnesota/A01940153/2015 (A/H3N2) segment 4 (HA)	3131.2	0.000000e+00	1699/1701 (99%)
EPI669264	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 4 (HA)	3129.3	0.000000e+00	1698/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1677/1702 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3001.9	0.000000e+00	1674/1699 (98%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1675/1702 (98%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1674/1701 (98%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1672/1701 (98%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1672/1701 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1671/1701 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	2979.8	0.000000e+00	1669/1698 (98%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1671/1701 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1671/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	2974.2	0.000000e+00	1670/1701 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1670/1701 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1670/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1669/1701 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1669/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1668/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1667/1701 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	2950.2	0.000000e+00	1666/1701 (97%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2950.2	0.000000e+00	1666/1700 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2948.4	0.000000e+00	1666/1701 (97%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2944.7	0.000000e+00	1665/1700 (97%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2942.8	0.000000e+00	1665/1701 (97%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2941.0	0.000000e+00	1664/1700 (97%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1663/1699 (97%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1701 (97%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	2939.1	0.000000e+00	1664/1700 (97%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI672997	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 6 (NA)	2604.9	0.000000e+00	1410/1410 (100%)
EPI669265	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 6 (NA)	2593.8	0.000000e+00	1408/1410 (99%)
EPI669263	A/swine/Minnesota/A01940153/2015 (A/H3N2) segment 6 (NA)	2593.8	0.000000e+00	1408/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1391/1411 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI573600	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2490.4	0.000000e+00	1389/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573810	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2484.9	0.000000e+00	1388/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI647585	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI641459	A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI597662	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI597656	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1390/1412 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI545417	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1389/1411 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI488006	A/swine/USA/A01291038/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI440750	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2481.2	0.000000e+00	1385/1406 (98%)
EPI663314	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2479.3	0.000000e+00	1387/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI557543	A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1375/1392 (98%)
EPI557533	A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1375/1392 (98%)
EPI545859	A/swine/North Carolina/A01476419/2014 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1389/1412 (98%)
EPI510221	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI487337	A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1810.8	0.000000e+00	981/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1810.8	0.000000e+00	981/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1805.3	0.000000e+00	980/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1801.6	0.000000e+00	979/982 (99%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	978/981 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1796.1	0.000000e+00	978/982 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1796.1	0.000000e+00	978/982 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1796.1	0.000000e+00	978/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI530308	A/swine/North Carolina/A01410321/2014 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI502748	A/swine/USA/A01409276/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	974/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398039	A/West Virginia/09/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI398038	A/Ohio/38/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397940	A/Ohio/81/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397921	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397746	A/Ohio/87/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397558	A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397543	A/Ohio/83/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397527	A/Ohio/47/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397519	A/Ohio/44/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397499	A/Indiana/104/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397399	A/Indiana/99/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI397380	A/Indiana/138/2012 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)

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