October 2015 North Carolina Swine Match 2012 Cases

niman · December 17, 2015

USDA released 2015 North Carolina swine sequences that match 2012 human cases.

niman · December 17, 2015

LOCUS       KU143619                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01857750/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143619
VERSION     KU143619.1  GI:960313421
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01857750/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01857750/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01857750/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01857750/2015"
                     /serotype="H3N2"
                     /isolation_source="nasal swab"
                     /host="swine"
                     /db_xref="taxon:1755979"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="13-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83224.1"
                     /db_xref="GI:960313422"
                     /translation="MKTIIAFSCILCLIFAQKPPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQNSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACKRGSV
                     KSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGESSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKSVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01857750.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacctccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 aattcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcaaaag gggttctgtt
      481 aaaagtttct ttagtagatt gaattggtta tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtggggaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcttgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaagt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3098.0	0.000000e+00	1693/1701 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3098.0	0.000000e+00	1693/1701 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3094.3	0.000000e+00	1692/1701 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3092.4	0.000000e+00	1692/1701 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3092.4	0.000000e+00	1692/1701 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3092.4	0.000000e+00	1692/1701 (99%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3088.7	0.000000e+00	1691/1701 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3086.9	0.000000e+00	1691/1701 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3072.1	0.000000e+00	1688/1701 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1701 (99%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3066.6	0.000000e+00	1687/1701 (99%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3057.3	0.000000e+00	1683/1698 (99%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1686/1702 (99%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1683/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3046.2	0.000000e+00	1682/1699 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1682/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1683/1702 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1682/1701 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1682/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3027.8	0.000000e+00	1680/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1677/1699 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI558822	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1676/1699 (98%)
EPI671792	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI645058	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1675/1699 (98%)
EPI573439	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	3001.9	0.000000e+00	1674/1699 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI550135	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1675/1700 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2540.3	0.000000e+00	1398/1410 (99%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI623627	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1395/1411 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI597662	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1394/1411 (98%)
EPI597656	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1394/1411 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI528783	A/swine/Indiana/A01260479/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1394/1411 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1394/1411 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2508.9	0.000000e+00	1390/1406 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397561	A/Wisconsin/29/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397445	A/Wisconsin/31/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397439	A/Wisconsin/30/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397411	A/Michigan/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397387	A/Indiana/49/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397214	A/Pennsylvania/17/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397212	A/Indiana/115/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397124	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396245	A/Indiana/125/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396229	A/Indiana/147/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396222	A/Indiana/57/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395942	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395929	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395893	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395269	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394076	A/Wisconsin/27/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394068	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI499985	A/swine/North Carolina/A01394918/2013 (A/H1N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI499701	A/swine/North Carolina/A01290729/2013 (A/H1N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI487964	A/swine/North Carolina/A01290565/2013 (A/H0) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI502663	A/swine/Illinois/A01290887/2013 (A/H1N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI487213	A/swine/North Carolina/A01290534/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI531049	A/swine/North Carolina/A01410511/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509545	A/swine/North Carolina/A01410024/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509540	A/swine/North Carolina/A01290805/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509529	A/swine/North Carolina/A01290797/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI507277	A/swine/North Carolina/A01409655/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492430	A/swine/North Carolina/A01290458/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492403	A/swine/North Carolina/A01290462/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI476512	A/swine/North Carolina/A01290349/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451188	A/swine/North Carolina/A01432634/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI502715	A/swine/North Carolina/A01290800/2013 (A/H1N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI623628	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531067	A/swine/North Carolina/A01410520/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531058	A/swine/North Carolina/A01410535/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531052	A/swine/North Carolina/A01410554/2014 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531046	A/swine/North Carolina/A01475277/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531010	A/swine/North Carolina/A01410555/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI510222	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI510180	A/swine/North Carolina/A01410205/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505101	A/swine/North Carolina/A01290956/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499665	A/swine/North Carolina/A01290725/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499656	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492427	A/swine/North Carolina/A01290473/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492393	A/swine/North Carolina/A01290447/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531073	A/swine/North Carolina/A01475272/2014 (A/H1N1) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI568694	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI530295	A/swine/North Carolina/A01410422/2014 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI508851	A/swine/North Carolina/A01410136/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI499637	A/swine/North Carolina/A01290636/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI467465	A/swine/North Carolina/A01432952/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI459659	A/swine/Pennsylvania/A01380412/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542513	A/swine/North Carolina/A01476095/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI532396	A/swine/North Carolina/A01410625/2014 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI531079	A/swine/North Carolina/A01410533/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI531007	A/swine/North Carolina/A01475257/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI531001	A/swine/North Carolina/A01475256/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI530317	A/swine/North Carolina/A01410329/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI510231	A/swine/North Carolina/A01409950/2014 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI508877	A/swine/North Carolina/A01410180/2014 (A/H3N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI504902	A/swine/Illinois/A01411204/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI502700	A/swine/North Carolina/A01290857/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI502651	A/swine/North Carolina/A01290856/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI489709	A/swine/South Carolina/A01394262/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI487968	A/swine/North Carolina/A01291004/2013 (A/H1N1) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI463707	A/swine/North Carolina/A01432766/2013 (A/H1N2) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI647515	A/swine/North Carolina/A02034477/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI645054	A/swine/Illinois/A02090072/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI641468	A/swine/Illinois/A01820879/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI621368	A/swine/Illinois/A01820513/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI615355	A/swine/Illinois/A01820485/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI600454	A/swine/North Carolina/A01476924/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI600427	A/swine/North Carolina/A01476896/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI600358	A/swine/North Carolina/A01476968/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI600352	A/swine/North Carolina/A01476902/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI597648	A/swine/North Carolina/A01478870/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI586022	A/swine/North Carolina/A01555546/2015 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI559565	A/swine/North Carolina/A01476557/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI559559	A/swine/North Carolina/A01478107/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI558830	A/swine/North Carolina/A01476722/2014 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI557793	A/swine/North Carolina/A01476778/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI557792	A/swine/North Carolina/A01476736/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI557791	A/swine/North Carolina/A01476738/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI557789	A/swine/North Carolina/A01476775/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI545821	A/swine/North Carolina/A01476359/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI532369	A/swine/North Carolina/A01410640/2014 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI438228	A/swine/Indiana/A01260209/2013 (A/H1N1) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI542522	A/swine/North Carolina/A01477162/2014 (A/H0) segment 7 (MP)	1761.0	0.000000e+00	972/982 (98%)
EPI672971	A/swine/North Carolina/A01945307/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI672959	A/swine/North Carolina/A01945329/2015 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI672860	A/swine/Illinois/A02090702/2015 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI669147	A/swine/North Carolina/A01770469/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI663354	A/swine/North Carolina/A02025520/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI663315	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI653881	A/swine/North Carolina/A02025523/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI647586	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI612564	A/swine/North Carolina/A01554473/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI597672	A/swine/North Carolina/A01476862/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI597645	A/swine/North Carolina/A01476810/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI586055	A/swine/North Carolina/A01555549/2015 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584851	A/swine/Nebraska/A01489870/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584830	A/swine/Nebraska/A01489868/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI584810	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI573008	A/swine/North Carolina/A01840074/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI568715	A/swine/North Carolina/A01555137/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI559598	A/swine/North Carolina/A01477720/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI559589	A/swine/North Carolina/A01476564/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI545845	A/swine/North Carolina/A01476462/2014 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI542516	A/swine/North Carolina/A01411902/2014 (A/H0) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI539063	A/swine/Nebraska/A01501767/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI532390	A/swine/Illinois/A01411761/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI526872	A/swine/Minnesota/A01480518/2014 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI505095	A/swine/Nebraska/A01409647/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI501539	A/swine/South Dakota/A01366063/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492657	A/swine/Nebraska/A01394342/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492409	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI487944	A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI467890	A/swine/Nebraska/A01397576/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI449017	A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI433321	A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI427146	A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI427131	A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI406513	A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401625	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI399378	A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI398122	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395845	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI391459	A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI390675	A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI383548	A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI347602	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI346435	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI346427	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI346419	A/Iowa/09/2011 (A/H3N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI341736	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)	1759.1	0.000000e+00	972/982 (98%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1757.3	0.000000e+00	971/981 (98%)
EPI502568	A/swine/Nebraska/A01395675/2013 (A/H3N2) segment 7 (MP)	1755.4	0.000000e+00	971/982 (98%)
EPI673003	A/swine/North Carolina/120138/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI669232	A/swine/North Carolina/A02025765/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI653895	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI612561	A/swine/North Carolina/A02076144/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI596341	A/swine/North Carolina/A01841556/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI596335	A/swine/North Carolina/A01841555/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI593903	A/swine/North Carolina/A01840366/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI586129	A/swine/North Carolina/A01555663/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI573798	A/swine/North Carolina/A01840320/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI568716	A/swine/North Carolina/A01555212/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI568693	A/swine/North Carolina/A01840329/2015 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI560137	A/swine/Nebraska/A01565950/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI558833	A/swine/North Carolina/A01476714/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI548246	A/swine/North Carolina/A01476535/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI531013	A/swine/North Carolina/A01475255/2014 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI509759	A/swine/Minnesota/A01366992/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI502690	A/swine/North Carolina/A01290799/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI499988	A/swine/Nebraska/A01394567/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI487955	A/swine/Indiana/A01260366/2013 (A/H1N1) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI476530	A/swine/Illinois/A01398587/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI472194	A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)

niman · December 17, 2015

LOCUS       KU160699                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01944727/2015(mixed))
            clone H3 segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU160699
VERSION     KU160699.1  GI:960314548
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01944727/2015(mixed))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01944727/2015(mixed))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01944727/2015(mixed))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01944727/2015"
                     /serotype="mixed"
                     /isolation_source="nasal swab"
                     /host="swine"
                     /db_xref="taxon:1757152"
                     /segment="4"
                     /clone="H3"
                     /country="USA: North Carolina"
                     /collection_date="16-Oct-2015"
                     /note="mixed infection: H1H3,N1N2"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83344.1"
                     /db_xref="GI:960314549"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV
                     KSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAIDQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTLDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01944727.4a"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctttatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggtgttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aaaagtttct ttagtagatt aaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattat acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag ggttatagtc
      661 tcaaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtgagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc gaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacacttg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctgggtttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3125.7	0.000000e+00	1698/1701 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3105.3	0.000000e+00	1694/1701 (99%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3099.8	0.000000e+00	1693/1701 (99%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3099.8	0.000000e+00	1693/1701 (99%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3083.2	0.000000e+00	1690/1701 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1688/1702 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1680/1698 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1679/1699 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1680/1702 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558822	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI671792	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI645058	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573439	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI600432	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 6 (NA)	2582.7	0.000000e+00	1406/1410 (99%)
EPI573819	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 6 (NA)	2579.0	0.000000e+00	1405/1410 (99%)
EPI573012	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI669136	A/swine/North Carolina/A02025687/2015 (A/H0) segment 6 (NA)	2542.1	0.000000e+00	1398/1410 (99%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI647585	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI663314	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI545417	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI653894	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545859	A/swine/North Carolina/A01476419/2014 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI542475	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 6 (NA)	2495.9	0.000000e+00	1391/1411 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2495.9	0.000000e+00	1390/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI573600	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI542445	A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI399293	A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI383540	A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2492.3	0.000000e+00	1387/1406 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2490.4	0.000000e+00	1389/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI620794	A/swine/Nebraska/A01847244/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590761	A/swine/Nebraska/A01847145/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590758	A/swine/Nebraska/A01847132/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573810	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433281	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1790.5	0.000000e+00	977/981 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1788.7	0.000000e+00	977/982 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1788.7	0.000000e+00	977/982 (99%)
EPI669137	A/swine/North Carolina/A02025687/2015 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI484437	A/swine/Indiana/A01260322/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI467724	A/swine/Indiana/A01260321/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	973/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398039	A/West Virginia/09/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398038	A/Ohio/38/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397940	A/Ohio/81/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397921	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397746	A/Ohio/87/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397558	A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397543	A/Ohio/83/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397527	A/Ohio/47/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397519	A/Ohio/44/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397499	A/Indiana/104/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397399	A/Indiana/99/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)

niman · December 17, 2015

LOCUS       KU160741                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01944728/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU160741
VERSION     KU160741.1  GI:960314745
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01944728/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01944728/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01944728/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01944728/2015"
                     /serotype="H3N2"
                     /isolation_source="nasal swab"
                     /host="swine"
                     /db_xref="taxon:1757153"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="16-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83399.1"
                     /db_xref="GI:960314746"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV
                     KSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAIDQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTLDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01944728.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctttatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggtgttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aaaagtttct ttagtagatt aaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattat acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag ggttatagtc
      661 tcaaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtgagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc gaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacacttg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctgggtttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3125.7	0.000000e+00	1698/1701 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3105.3	0.000000e+00	1694/1701 (99%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3099.8	0.000000e+00	1693/1701 (99%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3099.8	0.000000e+00	1693/1701 (99%)
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3083.2	0.000000e+00	1690/1701 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1688/1702 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1680/1698 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1679/1699 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1680/1702 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI558822	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI671792	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI645058	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573439	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)

niman · December 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI600432	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 6 (NA)	2582.7	0.000000e+00	1406/1410 (99%)
EPI573819	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 6 (NA)	2579.0	0.000000e+00	1405/1410 (99%)
EPI573012	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 6 (NA)	2571.7	0.000000e+00	1404/1410 (99%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2560.6	0.000000e+00	1402/1410 (99%)
EPI669136	A/swine/North Carolina/A02025687/2015 (A/H0) segment 6 (NA)	2542.1	0.000000e+00	1398/1410 (99%)
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2529.2	0.000000e+00	1396/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI647585	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI663314	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI545417	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1393/1411 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI653894	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI545859	A/swine/North Carolina/A01476419/2014 (A/H0) segment 6 (NA)	2499.6	0.000000e+00	1392/1411 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI542475	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 6 (NA)	2495.9	0.000000e+00	1391/1411 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2495.9	0.000000e+00	1390/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI573600	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI542445	A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI399293	A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI383540	A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2494.1	0.000000e+00	1390/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2492.3	0.000000e+00	1387/1406 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2490.4	0.000000e+00	1389/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI620794	A/swine/Nebraska/A01847244/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590761	A/swine/Nebraska/A01847145/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590758	A/swine/Nebraska/A01847132/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI573810	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)
EPI433281	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 6 (NA)	2488.6	0.000000e+00	1389/1410 (98%)

niman · December 17, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1799.8	0.000000e+00	979/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1794.2	0.000000e+00	978/982 (99%)
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1790.5	0.000000e+00	977/981 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1788.7	0.000000e+00	977/982 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1788.7	0.000000e+00	977/982 (99%)
EPI669137	A/swine/North Carolina/A02025687/2015 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI484437	A/swine/Indiana/A01260322/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI467724	A/swine/Indiana/A01260321/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	973/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398039	A/West Virginia/09/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398038	A/Ohio/38/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397940	A/Ohio/81/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397921	A/Ohio/18/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397746	A/Ohio/87/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397558	A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397543	A/Ohio/83/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397527	A/Ohio/47/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397519	A/Ohio/44/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397499	A/Indiana/104/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397399	A/Indiana/99/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)

niman · December 17, 2015

LOCUS       KU143646                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01945726/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143646
VERSION     KU143646.1  GI:960313649
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01945726/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01945726/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01945726/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01945726/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755982"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="19-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83260.1"
                     /db_xref="GI:960313650"
                     /translation="MKTIIAFSCILCLIFAQKLPGGDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLVASSGNLEFTQESFNWTGIAQDGSSYACKRGSG
                     NSFFSRLNWLYKLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDSDQTSLYVQASGKV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QNGKSSIMRSDAHIDECNSECITPNGSISNDKPFQNVNKITYGACPRYIKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDIWSYNAELLVALENQ
                     HTIDLTDSEMNKLFERTKRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945726.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga ttttcgctca aaaacttccc
       61 ggaggtgaca acagcatggc aacgctgtgc ctgggacacc atgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcatcaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttacta tgtaccagat
      361 tatgccactc ttaggtcact agttgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggaattgc tcaagacgga tcaagctatg cctgcaaaag gggatctggt
      481 aacagtttct ttagtagatt gaattggttg tataaattga attacaagta tccagaacag
      541 aatgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acagtgacca aaccagccta tatgtccaag catcagggaa agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg gatctagacc ctgggtaagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccgggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aaatgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca tttccaatga caaacctttt caaaatgtga acaagatcac atatggagcc
      961 tgtcccagat atattaaaca aaacaccctg aaattggcaa caggtatgcg gaatgtacca
     1021 gagaaacaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatgatag acggttggta cggtttcagg catcagaatt ctgaaggcac agggcaagca
     1141 gcagatctta aaagcactca agcagcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatatctg gtcttacaac
     1321 gctgagcttc ttgtagccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 aacaaactgt tcgaaagaac aaaaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aatgcctgca tcggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa gggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI492408	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI472184	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI391438	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395929	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI542445	A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397561	A/Wisconsin/29/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397445	A/Wisconsin/31/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397439	A/Wisconsin/30/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397411	A/Michigan/16/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397387	A/Indiana/49/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397214	A/Pennsylvania/17/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397212	A/Indiana/115/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397124	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396245	A/Indiana/125/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396229	A/Indiana/147/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396222	A/Indiana/57/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395942	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395893	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395269	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394076	A/Wisconsin/27/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394068	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394065	A/Indiana/60/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392754	A/Indiana/14/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI392710	A/Indiana/60/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392707	A/Indiana/59/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI388331	A/Utah/10/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2470.1	0.000000e+00	1383/1406 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2468.2	0.000000e+00	1385/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI550081	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546918	A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546892	A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527842	A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527152	A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527135	A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527073	A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527050	A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527008	A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527002	A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526977	A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526940	A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526912	A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI510221	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI509743	A/swine/Iowa/13H081/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI509722	A/swine/Iowa/13H082/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI499923	A/swine/Iowa/13H094/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI468208	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468200	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI465419	A/Indiana/17/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI460976	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443111	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443101	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443098	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI426907	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI424075	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI414155	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401677	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI399293	A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397960	A/Ohio/88/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397509	A/Indiana/90/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396213	A/Indiana/113/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395734	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395343	A/Wisconsin/28/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI393915	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI383540	A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401668	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 6 (NA)	2464.6	0.000000e+00	1384/1409 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI465390	A/Indiana/09/2013 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI550067	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI549962	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528783	A/swine/Indiana/A01260479/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528458	A/swine/Indiana/13TOSU1143/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528455	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528426	A/swine/Indiana/13TOSU1149/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528423	A/swine/Indiana/13TOSU1144/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527994	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527945	A/swine/Indiana/13TOSU1151/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527898	A/swine/Indiana/13TOSU1145/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527846	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527158	A/swine/Indiana/13TOSU1158/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527087	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527062	A/swine/Indiana/13TOSU1160/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)

niman · December 17, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI492409	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI487944	A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI449017	A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433321	A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427146	A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427131	A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406513	A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI399378	A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398122	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395845	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI391459	A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI390675	A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI383548	A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI347602	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346435	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346427	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346419	A/Iowa/09/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI341736	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1785.0	0.000000e+00	976/981 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492430	A/swine/North Carolina/A01290458/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492403	A/swine/North Carolina/A01290462/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476512	A/swine/North Carolina/A01290349/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472194	A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI467602	A/swine/Iowa/A01244805/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461427	A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461420	A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461386	A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459659	A/swine/Pennsylvania/A01380412/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459607	A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459599	A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459591	A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459573	A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459535	A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459520	A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459499	A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459488	A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459466	A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457158	A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457150	A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457142	A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457134	A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457126	A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457118	A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI453430	A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451188	A/swine/North Carolina/A01432634/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446730	A/swine/Ohio/A01349559/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441649	A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI438206	A/swine/Virginia/A01432419/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433310	A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415974	A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415966	A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415958	A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415950	A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415942	A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415926	A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415918	A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415904	A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415896	A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415888	A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415880	A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415871	A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415862	A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415853	A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415846	A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415838	A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415830	A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415812	A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415804	A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415796	A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415779	A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415771	A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415762	A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415745	A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415737	A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415720	A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415685	A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415617	A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415573	A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415556	A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415548	A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415497	A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415481	A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415473	A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415465	A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415457	A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415449	A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415441	A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415433	A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415425	A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415415	A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415411	A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415403	A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415395	A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415387	A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415379	A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415371	A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415365	A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415357	A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415349	A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415341	A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415313	A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415289	A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415257	A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415249	A/swine/Ohio/11SW113/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415241	A/swine/Ohio/11SW112/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415225	A/swine/Ohio/11SW108/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408330	A/swine/Indiana/A01432188/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)

niman · December 18, 2015

LOCUS       KU143652                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01945728/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143652
VERSION     KU143652.1  GI:960313679
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01945728/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01945728/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01945728/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01945728/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755983"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="19-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83268.1"
                     /db_xref="GI:960313680"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV
                     KSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRFVKQKTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945728.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggttcag
      181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgttccagat
      361 tatgctaccc ttaggtcact aattgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aaaagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag ggttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gacgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat ttgttaagca aaaaaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgaacttc ttgttgccct agagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattgaaca atcggttcca gatcaaaggt
     1561 gttcagctga agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

niman · December 18, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI542524	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)	3083.2	0.000000e+00	1690/1701 (99%)
EPI532373	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)	3081.3	0.000000e+00	1690/1701 (99%)
EPI573807	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)	3077.6	0.000000e+00	1689/1701 (99%)
EPI542551	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI542447	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)	3075.8	0.000000e+00	1689/1701 (99%)
EPI623626	A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI574154	A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI531059	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)	3070.3	0.000000e+00	1688/1701 (99%)
EPI597655	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1688/1702 (99%)
EPI572994	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI545416	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI534947	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1687/1701 (99%)
EPI532376	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)	3064.7	0.000000e+00	1688/1702 (99%)
EPI538664	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI533782	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)	3061.0	0.000000e+00	1686/1701 (99%)
EPI593956	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI559548	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558883	A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558842	A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558839	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558834	A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI558819	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI550293	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI530996	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)	3059.2	0.000000e+00	1686/1701 (99%)
EPI542548	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)	3055.5	0.000000e+00	1685/1701 (99%)
EPI586151	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI559025	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545858	A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545840	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545816	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI545379	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI538670	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)	3053.6	0.000000e+00	1685/1701 (99%)
EPI600431	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI597661	A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI573035	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)	3049.9	0.000000e+00	1684/1701 (99%)
EPI584808	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573818	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573793	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573479	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573350	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI550296	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI548259	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI545407	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542563	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI542542	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)	3048.1	0.000000e+00	1684/1701 (99%)
EPI573011	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)	3044.4	0.000000e+00	1683/1701 (98%)
EPI623700	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI600344	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI573020	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI559533	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI545813	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)	3042.6	0.000000e+00	1683/1701 (98%)
EPI542474	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)	3040.7	0.000000e+00	1680/1698 (98%)
EPI620523	A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI600449	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)	3038.9	0.000000e+00	1682/1701 (98%)
EPI669209	A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI623703	A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI598964	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)	3037.0	0.000000e+00	1682/1701 (98%)
EPI573452	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)	3033.3	0.000000e+00	1681/1701 (98%)
EPI672951	A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI620526	A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI620490	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI612571	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI559530	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557544	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI557542	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI542530	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)	3031.5	0.000000e+00	1681/1701 (98%)
EPI623651	A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1680/1701 (98%)
EPI558851	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)	3029.6	0.000000e+00	1679/1699 (98%)
EPI669224	A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI669154	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI620514	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573017	A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI573003	A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI557534	A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510214	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510211	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510199	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510190	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI510173	A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI507284	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI505102	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI504864	A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	3025.9	0.000000e+00	1680/1701 (98%)
EPI647569	A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI600347	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI590659	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)	3024.1	0.000000e+00	1679/1701 (98%)
EPI669135	A/swine/North Carolina/A02025687/2015 (A/H0) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI600470	A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)	3022.2	0.000000e+00	1679/1701 (98%)
EPI672887	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663380	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI663334	A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI647584	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573495	A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573486	A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573448	A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI545852	A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI538990	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530299	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI530284	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI508836	A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	3020.4	0.000000e+00	1679/1701 (98%)
EPI573445	A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI508858	A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)	3016.7	0.000000e+00	1678/1701 (98%)
EPI669236	A/swine/North Carolina/A01857103/2015 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI663367	A/swine/North Carolina/A01769650/2015 (A/H0) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI573599	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI530309	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI505062	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI460387	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI460372	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1678/1701 (98%)
EPI573602	A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI573000	A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)	3013.0	0.000000e+00	1677/1701 (98%)
EPI663313	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 4 (HA)	3011.2	0.000000e+00	1677/1701 (98%)
EPI669247	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI669178	A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI653893	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI647504	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI586038	A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI584802	A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI531097	A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI505039	A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)	3009.3	0.000000e+00	1677/1701 (98%)
EPI573714	A/swine/Kansas/14-032477/2014 (A/H3N2) segment 4 (HA)	3005.6	0.000000e+00	1676/1701 (98%)
EPI584734	A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)	3003.8	0.000000e+00	1676/1701 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	3000.1	0.000000e+00	1674/1699 (98%)
EPI642513	A/Michigan/39/2015 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI509764	A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)	2998.2	0.000000e+00	1675/1701 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2994.5	0.000000e+00	1673/1699 (98%)
EPI671792	A/swine/Illinois/A01857433/2015 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI559527	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)	2992.7	0.000000e+00	1674/1701 (98%)
EPI645058	A/swine/Indiana/A01260926/2015 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573566	A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573051	A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1673/1701 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI457281	A/swine/Korea/CY02-08/2012 (A/H3N1) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI457109	A/swine/Korea/CY02-07/2012 (A/H3N1) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2989.0	0.000000e+00	1672/1699 (98%)
EPI573439	A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI558822	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1673/1701 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2985.3	0.000000e+00	1671/1699 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI453425	A/swine/Korea/KSB/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2983.5	0.000000e+00	1671/1699 (98%)

niman · December 18, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI532374	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA)	2545.8	0.000000e+00	1399/1410 (99%)
EPI574155	A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2544.0	0.000000e+00	1399/1410 (99%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2540.3	0.000000e+00	1398/1410 (99%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2540.3	0.000000e+00	1398/1410 (99%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2538.4	0.000000e+00	1398/1410 (99%)
EPI530997	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA)	2534.7	0.000000e+00	1397/1410 (99%)
EPI600348	A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI600345	A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI573480	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI559534	A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI558882	A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI558843	A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI550294	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI542448	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA)	2532.9	0.000000e+00	1397/1410 (99%)
EPI600450	A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI598965	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI573021	A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI572995	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI545841	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542564	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542552	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542543	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542525	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI538671	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI533959	A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA)	2527.3	0.000000e+00	1396/1410 (99%)
EPI542549	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA)	2523.6	0.000000e+00	1395/1410 (98%)
EPI669155	A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI620515	A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI612572	A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573808	A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI573036	A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI559531	A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI559026	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558840	A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558835	A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI558820	A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI550297	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI548260	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2521.8	0.000000e+00	1395/1410 (98%)
EPI593957	A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1394/1410 (98%)
EPI542475	A/swine/Kansas/018050-1/2014 (A/H3N2) segment 6 (NA)	2518.1	0.000000e+00	1395/1411 (98%)
EPI647585	A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI584809	A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI545817	A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1395/1411 (98%)
EPI545417	A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1395/1411 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2516.3	0.000000e+00	1394/1410 (98%)
EPI669248	A/swine/North Carolina/A02025897/2015 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI663314	A/swine/North Carolina/A01770059/2015 (A/H3N2) segment 6 (NA)	2512.6	0.000000e+00	1393/1410 (98%)
EPI653894	A/swine/North Carolina/A02034953/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573794	A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI573453	A/swine/Iowa/A01555142/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI559549	A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI558823	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI545859	A/swine/North Carolina/A01476419/2014 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1394/1411 (98%)
EPI530300	A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI530285	A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI510212	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI507285	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI505103	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI505043	A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI504865	A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA)	2507.0	0.000000e+00	1392/1410 (98%)
EPI672888	A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI663381	A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI623701	A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI620491	A/swine/North Carolina/A02077505/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI600432	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI586152	A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI573600	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI573012	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI545814	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI530310	A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI505063	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2505.2	0.000000e+00	1392/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2503.3	0.000000e+00	1389/1406 (98%)
EPI573819	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2501.5	0.000000e+00	1391/1410 (98%)
EPI647505	A/swine/North Carolina/A02034471/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI590660	A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI573810	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI559528	A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI459658	A/swine/Pennsylvania/A01380412/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI433281	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI407278	A/Minnesota/18/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397561	A/Wisconsin/29/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397445	A/Wisconsin/31/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)
EPI397439	A/Wisconsin/30/2012 (A/H3N2) segment 6 (NA)	2499.6	0.000000e+00	1391/1410 (98%)

niman · December 18, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406528	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406505	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI404893	A/Iowa/16/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI499949	A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP)	1783.1	0.000000e+00	976/982 (99%)
EPI673002	A/swine/Minnesota/A01940148/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI672998	A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI600433	A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI597657	A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI573352	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI572996	A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI568725	A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI568695	A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI559027	A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550298	A/swine/Iowa/A01410995/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI549991	A/swine/Indiana/13TOSU5730/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI545815	A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542565	A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542532	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542526	A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI532378	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531061	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI531031	A/swine/Illinois/A01475266/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528443	A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI526923	A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509751	A/swine/Iowa/13H068/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509744	A/swine/Iowa/13H081/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509737	A/swine/Iowa/13H075/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509723	A/swine/Iowa/13H082/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505077	A/swine/Illinois/A01409675/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI501536	A/swine/Minnesota/A01366050/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499940	A/swine/Iowa/13H069/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499924	A/swine/Iowa/13H094/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI493014	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485857	A/swine/Michigan/A01259075/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472185	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI467959	A/swine/Ohio/A01351573/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI466711	A/Illinois/03/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465380	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI464501	A/Indiana/04/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI464498	A/Indiana/05/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI463731	A/swine/Iowa/A01432784/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446736	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI406468	A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397754	A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397407	A/Michigan/16/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397391	A/Indiana/93/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI397373	A/Indiana/123/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395894	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395861	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395853	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI394072	A/Wisconsin/27/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI394064	A/Indiana/60/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI393658	A/Ohio/62/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI388349	A/Indiana/20/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI388342	A/Indiana/15/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI383550	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1779.4	0.000000e+00	975/981 (99%)
EPI573013	A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI557797	A/swine/North Carolina/A01476771/2014 (A/H0) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI396290	A/Ohio/63/2012 (A/H3N2) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI394917	A/Ohio/69/2012 (A/H3N2) segment 7 (MP)	1777.6	0.000000e+00	975/982 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI598966	A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573811	A/swine/Indiana/A01840344/2014 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI573601	A/swine/Indiana/A01840253/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI560131	A/swine/Iowa/A01565921/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI558878	A/swine/Nebraska/A01477775/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI557790	A/swine/Indiana/A01476743/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI550131	A/swine/Indiana/13TOSU5147/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI548261	A/swine/Iowa/A01476428/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI545842	A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI545409	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI542449	A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI538992	A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI538957	A/swine/South Dakota/A01481811/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI538672	A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI534946	A/swine/Iowa/A01501240/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI533784	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI528007	A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI528003	A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI528000	A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI527093	A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI510216	A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI510213	A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI510201	A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI510192	A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI510175	A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI509772	A/swine/Indiana/A01260424/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI507286	A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI505104	A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI505064	A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI504869	A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI502745	A/swine/Iowa/A01290820/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI493691	A/swine/Iowa/13E045/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492999	A/swine/Illinois/A01394861/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492969	A/swine/Illinois/A01394862/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI487345	A/swine/Illinois/A01392224/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI467962	A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI461015	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI460762	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	971/976 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI440752	A/swine/Indiana/A01432512/2013 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433280	A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI427198	A/swine/Indiana/A01260180/2012 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	976/983 (99%)
EPI427192	A/swine/Indiana/A01260169/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI406574	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI406471	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401623	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI401619	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI400107	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI400104	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398529	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398503	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)
EPI398150	A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP)	1775.8	0.000000e+00	975/982 (99%)

niman · December 18, 2015

LOCUS       KU143677                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01945740/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143677
VERSION     KU143677.1  GI:960313867
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01945740/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01945740/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01945740/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01945740/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755984"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="21-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83301.1"
                     /db_xref="GI:960313868"
                     /translation="MKTIIAFSCILCLIFAQKLPGGDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLVASSGNLEFTQESFNWTGIAQDGSSYACKRGSG
                     NSFFSRLNWLYKLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDSDQTSLYVQASGKV
                     IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QNGKSSIMRSDAHIDECNSECITPNGSISNDKPFQNVNKITYGACPRYIKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDIWSYNAELLVALENQ
                     HTIDLTDSEMNKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945740.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga ttttcgctca aaaacttccc
       61 ggaggtgaca acagcatggc aacgctgtgc ctgggacacc atgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtagaat atgcaacagt cctcatcaaa tccttgatgg gaaaaattgc
      241 acactgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttacta tgtaccagat
      361 tatgccactc ttaggtcact agttgcctca tctggcaacc tggaatttac ccaagaaagc
      421 ttcaattgga ctggaattgc tcaagacgga tcaagctatg cctgcaaaag gggatctggt
      481 aacagtttct ttagtagatt gaattggttg tataaattga attacaagta tccagaacag
      541 aatgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acagtgacca aaccagccta tatgtccaag catcagggaa agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg gatctagacc ctgggtaagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccgggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aaatgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca tttccaatga caaacctttt caaaatgtga acaagatcac atatggagcc
      961 tgtcccagat atattaaaca aaacaccctg aaattggcaa caggtatgcg gaatgtacca
     1021 gagaaacaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatgatag acggttggta cggtttcagg catcagaatt ctgaaggcac agggcaagca
     1141 gcagatctta aaagcactca agcagcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatatctg gtcttacaac
     1321 gctgagcttc ttgtagccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 aacaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat
     1441 ggttgcttca aaatatacca caaatgtgac aatgcctgca tcggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa gggcaacatt
     1681 aggtgcaaca tttgcatttg a

niman · December 18, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI492407	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 4 (HA)	3014.9	0.000000e+00	1679/1702 (98%)
EPI398672	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI391413	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)	2987.2	0.000000e+00	1674/1702 (98%)
EPI446927	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446919	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446863	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI446830	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI401702	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398542	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398534	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI398526	A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397969	A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397962	A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397548	A/Ohio/84/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397540	A/Ohio/56/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397446	A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397426	A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396270	A/Indiana/133/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396192	A/Ohio/77/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI396175	A/Ohio/80/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395874	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395866	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI395344	A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394937	A/Ohio/75/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394933	A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394921	A/Ohio/69/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394913	A/Indiana/132/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI394077	A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI393782	A/Ohio/74/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI393702	A/Ohio/64/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI392748	A/Wisconsin/22/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI388327	A/Indiana/14/2012 (A/H3N2) segment 4 (HA)	2981.6	0.000000e+00	1673/1702 (98%)
EPI397562	A/Wisconsin/29/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1672/1702 (98%)
EPI396200	A/Ohio/79/2012 (A/H3N2) segment 4 (HA)	2977.9	0.000000e+00	1672/1702 (98%)
EPI528431	A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI527870	A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI527113	A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI451202	A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI446888	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI446879	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI446838	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI446800	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI443550	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI443542	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI443534	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI443518	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI443510	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI426887	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI414186	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI414170	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI408202	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI406576	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI406504	A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI404890	A/Iowa/16/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI401687	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI401676	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI401609	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI398040	A/Ohio/57/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397913	A/Indiana/123/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397906	A/Illinois/11/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397905	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397662	A/Maryland/28/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397555	A/Ohio/86/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397396	A/Indiana/93/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397210	A/Maryland/25/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI397006	A/Ohio/78/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI396291	A/Ohio/63/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI396262	A/Indiana/127/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI396254	A/Indiana/126/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI395883	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI395259	A/Ohio/35/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI394944	A/Maryland/22/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI393306	A/Indiana/18/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI392926	A/Maryland/20/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI391404	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI388352	A/Indiana/20/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI388346	A/Indiana/15/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI388298	A/Indiana/19/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI388282	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI383528	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI381873	A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI366030	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI346493	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2976.1	0.000000e+00	1672/1702 (98%)
EPI398492	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI395328	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2972.4	0.000000e+00	1671/1702 (98%)
EPI493012	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI492349	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI443558	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI443526	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI433540	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI433533	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI433306	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI433298	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI424073	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI414178	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI406530	A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI401684	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI401680	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI401667	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI400105	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI398518	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI398500	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI398479	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397961	A/Ohio/88/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397954	A/Ohio/85/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397939	A/Ohio/41/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397532	A/Ohio/47/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397524	A/Ohio/44/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397516	A/Ohio/36/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397503	A/Indiana/104/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397432	A/Ohio/81/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397412	A/Michigan/16/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397385	A/Indiana/138/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397351	A/Ohio/37/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397340	A/Indiana/150/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI397089	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI396299	A/Maryland/23/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI396280	A/Indiana/144/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI396208	A/Indiana/149/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI396183	A/Indiana/77/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395858	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395850	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395718	A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395711	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395357	A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395270	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI395267	A/Ohio/65/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393914	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393695	A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393681	A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393673	A/Ohio/71/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393661	A/Ohio/62/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393519	A/Indiana/65/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393317	A/Ohio/38/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393311	A/West Virginia/09/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393299	A/Indiana/31/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI393298	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI392735	A/Pennsylvania/13/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI392696	A/Indiana/43/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI392693	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI388362	A/Indiana/16/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI388332	A/Utah/10/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI381427	A/swine/Ohio/7/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI381424	A/swine/Ohio/9/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI377542	A/swine/Ohio/1/2012 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI346440	A/Iowa/08/2011 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI346432	A/Iowa/07/2011 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI346424	A/Iowa/09/2011 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI342704	A/Iowa/09/2011 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI342603	A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)	2970.5	0.000000e+00	1671/1702 (98%)
EPI414156	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI397206	A/Ohio/34/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI396277	A/Indiana/135/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI395331	A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI394060	A/Indiana/38/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI392699	A/Indiana/46/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI388290	A/Indiana/17/2012 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI342696	A/Iowa/08/2011 (A/H3N2) segment 4 (HA)	2966.8	0.000000e+00	1670/1702 (98%)
EPI453427	A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI453426	A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI446871	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1671/1703 (98%)
EPI440751	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI426908	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI408199	A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI407279	A/Minnesota/18/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI400095	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI398124	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397912	A/Indiana/114/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397677	A/Ohio/83/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397654	A/Indiana/90/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397418	A/Michigan/23/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397404	A/Indiana/99/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397344	A/Michigan/19/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI397211	A/Indiana/113/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI396239	A/Indiana/103/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395956	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395948	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395940	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395932	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395740	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI395251	A/Indiana/152/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI394069	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI394063	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI378523	A/Indiana/09/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI378515	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI378502	A/Indiana/07/2012 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI347607	A/Iowa/08/2011 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI347604	A/Iowa/07/2011 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI339171	A/Maine/06/2011 (A/H3N2) segment 4 (HA)	2965.0	0.000000e+00	1670/1702 (98%)
EPI392705	A/Indiana/52/2012 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1669/1702 (98%)
EPI392684	A/Indiana/13/2012 (A/H3N2) segment 4 (HA)	2963.1	0.000000e+00	1669/1702 (98%)
EPI460390	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1668/1700 (98%)
EPI397204	A/Indiana/21/2012 (A/H3N2) segment 4 (HA)	2961.3	0.000000e+00	1669/1702 (98%)
EPI653868	A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI653857	A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI653774	A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI550135	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI526932	A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1670/1703 (98%)
EPI509734	A/swine/Iowa/13H075/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI499946	A/swine/Iowa/13H087/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI493688	A/swine/Iowa/13E045/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI443109	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI443106	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI443099	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI443096	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI427184	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI426890	A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI400101	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI397759	A/Wisconsin/35/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI397106	A/Indiana/115/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI397092	A/Indiana/57/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI396246	A/Indiana/125/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI396230	A/Indiana/147/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI395891	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI395843	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1670/1703 (98%)
EPI395732	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI395725	A/swine/Indiana/A01104029/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI395351	A/Michigan/20/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI395335	A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1702 (98%)
EPI392708	A/Indiana/59/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI391032	A/swine/Iowa/A01202530/2011 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI391031	A/swine/Iowa/A01202573/2011 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI391028	A/swine/Iowa/A01202529/2011 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI369064	A/swine/Illinois/A00857304b/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI369056	A/swine/Illinois/A00857304a/2012 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI369048	A/swine/Illinois/A00857138b/2011 (A/H1N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI369037	A/swine/Illinois/A00857138a/2011 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI369022	A/swine/Illinois/A00857300/2011 (A/H0) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI351662	A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1668/1701 (98%)
EPI317003	A/swine/Indiana/A0109091/2010 (A/H3N2) segment 4 (HA)	2959.5	0.000000e+00	1669/1702 (98%)
EPI460381	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1667/1700 (98%)
EPI392934	A/Minnesota/11/2012 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI392711	A/Indiana/60/2012 (A/H3N2) segment 4 (HA)	2955.8	0.000000e+00	1668/1702 (98%)
EPI504870	A/swine/Iowa/A01290867/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI492991	A/swine/Iowa/A01394595/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI492391	A/swine/North Carolina/A01290447/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI482825	A/Iowa/04/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI472195	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI472183	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI461014	A/swine/South Dakota/A01350803/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI460375	A/swine/Indiana/A01260280/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI457281	A/swine/Korea/CY02-08/2012 (A/H3N1) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI457163	A/swine/Indiana/9622/2011 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI457109	A/swine/Korea/CY02-07/2012 (A/H3N1) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI453566	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI446735	A/swine/Ohio/A01349615/2013 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI416854	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI406469	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI391369	A/swine/Iowa/A01202879/2011 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)
EPI391368	A/swine/Iowa/A01202878/2011 (A/H3N2) segment 4 (HA)	2953.9	0.000000e+00	1668/1702 (98%)

niman · December 18, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI492408	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 6 (NA)	2510.7	0.000000e+00	1393/1410 (98%)
EPI499948	A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI472184	A/swine/Iowa/A01432840/2013 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446924	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446916	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446860	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446835	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI446797	A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443547	A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI443523	A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI433303	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI433295	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI414172	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401703	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401688	A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401685	A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI401681	A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400106	A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI400096	A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398671	A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398544	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398536	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398520	A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398502	A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398494	A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398486	A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI398034	A/Maryland/22/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397946	A/Ohio/84/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397904	A/Hawaii/03/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397661	A/Maryland/28/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397626	A/Ohio/57/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397620	A/Maryland/25/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397554	A/Ohio/86/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397531	A/Ohio/47/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397523	A/Ohio/44/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397515	A/Ohio/36/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397431	A/Ohio/81/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397425	A/Minnesota/15/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397350	A/Ohio/37/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397208	A/Ohio/78/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI397088	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396276	A/Indiana/135/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396261	A/Indiana/127/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396253	A/Indiana/126/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396234	A/Ohio/34/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI396191	A/Ohio/77/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395885	A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395876	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395868	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395336	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395266	A/Ohio/65/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI395258	A/Ohio/35/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394925	A/Illinois/11/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI394062	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393701	A/Ohio/64/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393694	A/West Virginia/16/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393680	A/West Virginia/10/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393672	A/Ohio/71/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393316	A/Ohio/38/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393310	A/West Virginia/09/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI393305	A/Indiana/18/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392704	A/Indiana/52/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI392683	A/Indiana/13/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI391438	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI383539	A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA)	2483.0	0.000000e+00	1388/1410 (98%)
EPI509736	A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI502642	A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI492350	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460388	A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460382	A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460373	A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI460367	A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446885	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446876	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446868	A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI446827	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443539	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443531	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443515	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI443507	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433542	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI433535	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI426886	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI408203	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI406575	A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI404892	A/Iowa/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI400102	A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI398123	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397931	A/Ohio/19/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397918	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397750	A/Ohio/87/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397627	A/Ohio/63/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397625	A/Ohio/43/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397624	A/Ohio/80/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397623	A/Indiana/150/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397621	A/Ohio/79/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397547	A/Ohio/83/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397539	A/Ohio/56/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397502	A/Indiana/104/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397403	A/Indiana/99/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397395	A/Indiana/93/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397377	A/Indiana/123/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397363	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396298	A/Maryland/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396269	A/Indiana/133/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396207	A/Indiana/149/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI396182	A/Indiana/77/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395958	A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395950	A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395934	A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395929	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395921	A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395860	A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395852	A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395742	A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395330	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI395327	A/West Virginia/06/2011 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394936	A/Ohio/75/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394932	A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394920	A/Ohio/69/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394912	A/Indiana/132/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394905	A/Ohio/62/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI394059	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393696	A/Indiana/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393687	A/Ohio/23/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393666	A/Ohio/28/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393518	A/Indiana/65/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393510	A/Ohio/52/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393297	A/Indiana/21/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393294	A/Ohio/24/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI393291	A/Indiana/38/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392752	A/Indiana/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392698	A/Indiana/46/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392695	A/Indiana/43/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392691	A/Indiana/31/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI392677	A/Ohio/13/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388365	A/Ohio/17/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388345	A/Indiana/15/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388338	A/Ohio/16/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388329	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388320	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388318	A/Ohio/20/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388311	A/Ohio/15/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI388304	A/Ohio/14/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI378522	A/Indiana/09/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI378514	A/Indiana/07/2012 (A/H3N2) segment 6 (NA)	2477.5	0.000000e+00	1387/1410 (98%)
EPI397924	A/Ohio/18/2012 (A/H3N2) segment 6 (NA)	2473.8	0.000000e+00	1386/1410 (98%)
EPI542445	A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI499655	A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI493013	A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI460391	A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI448835	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI443555	A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI427179	A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI416856	A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414188	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414180	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI414029	A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI406470	A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI401610	A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397561	A/Wisconsin/29/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397445	A/Wisconsin/31/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397439	A/Wisconsin/30/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI397411	A/Michigan/16/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397387	A/Indiana/49/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397384	A/Indiana/138/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397214	A/Pennsylvania/17/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397212	A/Indiana/115/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397124	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI397097	A/Indiana/103/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396279	A/Indiana/144/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396245	A/Indiana/125/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396229	A/Indiana/147/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI396222	A/Indiana/57/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395942	A/swine/Indiana/A00968373/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395893	A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395269	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI395250	A/Indiana/152/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394076	A/Wisconsin/27/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394068	A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI394065	A/Indiana/60/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392754	A/Indiana/14/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1387/1411 (98%)
EPI392710	A/Indiana/60/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI392707	A/Indiana/59/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI388331	A/Utah/10/2012 (A/H3N2) segment 6 (NA)	2471.9	0.000000e+00	1386/1410 (98%)
EPI393526	A/West Virginia/15/2012 (A/H3N2) segment 6 (NA)	2470.1	0.000000e+00	1383/1406 (98%)
EPI395712	A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA)	2468.2	0.000000e+00	1385/1410 (98%)
EPI647624	A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI558852	A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI550081	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546918	A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI546892	A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI531060	A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527842	A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527152	A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527135	A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527073	A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527050	A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527008	A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI527002	A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526977	A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526940	A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI526912	A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI510221	A/swine/North Carolina/A01409981/2014 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI509743	A/swine/Iowa/13H081/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI509722	A/swine/Iowa/13H082/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI499923	A/swine/Iowa/13H094/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI468208	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI468200	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI465419	A/Indiana/17/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI460976	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443111	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443101	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI443098	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI426907	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI424075	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI414155	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401677	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI399293	A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397960	A/Ohio/88/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI397509	A/Indiana/90/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI396213	A/Indiana/113/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395734	A/swine/Indiana/A01104030/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI395343	A/Wisconsin/28/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1386/1411 (98%)
EPI393915	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI383540	A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA)	2466.4	0.000000e+00	1385/1410 (98%)
EPI401668	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 6 (NA)	2464.6	0.000000e+00	1384/1409 (98%)
EPI533783	A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI532377	A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI465390	A/Indiana/09/2013 (A/H3N2) segment 6 (NA)	2462.7	0.000000e+00	1384/1410 (98%)
EPI573351	A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI550067	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI549962	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI545408	A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI545380	A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI542531	A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI538665	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI534948	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528783	A/swine/Indiana/A01260479/2014 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528458	A/swine/Indiana/13TOSU1143/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528455	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528426	A/swine/Indiana/13TOSU1149/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI528423	A/swine/Indiana/13TOSU1144/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527994	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527945	A/swine/Indiana/13TOSU1151/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527898	A/swine/Indiana/13TOSU1145/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527846	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527158	A/swine/Indiana/13TOSU1158/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527087	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)
EPI527062	A/swine/Indiana/13TOSU1160/2013 (A/H1N2) segment 6 (NA)	2460.9	0.000000e+00	1384/1410 (98%)

niman · December 18, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI492409	A/swine/North Carolina/A01290442/2013 (A/H3N2) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI492963	A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI492380	A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI489727	A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI441498	A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI433271	A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI426874	A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414110	A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414104	A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414053	A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414050	A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI414038	A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI408198	A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI407026	A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI406535	A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI398690	A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395329	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI395324	A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI391475	A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI391470	A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)	1792.4	0.000000e+00	978/982 (99%)
EPI546902	A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI542553	A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI492351	A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI487944	A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI464431	A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI451230	A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI449017	A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446881	A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446873	A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446857	A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446832	A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446824	A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI446733	A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI433321	A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427146	A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI427131	A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI414181	A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI407274	A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI406513	A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401715	A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401659	A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI401615	A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI399378	A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398545	A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398537	A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI398122	A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397957	A/Ohio/88/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397943	A/Ohio/84/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397902	A/Hawaii/03/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397551	A/Ohio/86/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397535	A/Ohio/56/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397435	A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI397421	A/Minnesota/15/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396197	A/Ohio/79/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396187	A/Ohio/77/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI396172	A/Ohio/80/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395930	A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395877	A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395869	A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395845	A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395354	A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395340	A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI395268	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI394928	A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI393916	A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI393699	A/Ohio/64/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI391459	A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI390675	A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI383548	A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI347602	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346435	A/Iowa/08/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346427	A/Iowa/07/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI346419	A/Iowa/09/2011 (A/H3N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI341736	A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)	1786.8	0.000000e+00	977/982 (99%)
EPI394067	A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP)	1785.0	0.000000e+00	976/981 (99%)
EPI600424	A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI598963	A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI557795	A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550295	A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550280	A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550224	A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550215	A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550173	A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550138	A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550117	A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550103	A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550082	A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550068	A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI550061	A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI549963	A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI547388	A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542550	A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI542544	A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538919	A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI538666	A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI534949	A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI532375	A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI530998	A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528475	A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI528427	A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527868	A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527099	A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI527088	A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI526885	A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509787	A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509784	A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI509775	A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI507295	A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505083	A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505070	A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI505038	A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI502385	A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI499890	A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492430	A/swine/North Carolina/A01290458/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492403	A/swine/North Carolina/A01290462/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492390	A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI492377	A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485991	A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI485983	A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI484455	A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482815	A/Indiana/21/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI482812	A/Indiana/11/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476669	A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI476512	A/swine/North Carolina/A01290349/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472212	A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472197	A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI472194	A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468209	A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI468201	A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI467602	A/swine/Iowa/A01244805/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465418	A/Indiana/17/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465389	A/Indiana/09/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465386	A/Indiana/10/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI465383	A/Indiana/07/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI463710	A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461427	A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461420	A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI461386	A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI460975	A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459659	A/swine/Pennsylvania/A01380412/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459607	A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459599	A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459591	A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459573	A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459535	A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459520	A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459499	A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459488	A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI459466	A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457158	A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457150	A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457142	A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457134	A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457126	A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI457118	A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI453568	A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI453430	A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451224	A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451205	A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI451188	A/swine/North Carolina/A01432634/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI448836	A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI447028	A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446921	A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446913	A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI446730	A/swine/Ohio/A01349559/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443536	A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443528	A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443512	A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443504	A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443110	A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443107	A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443100	A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI443097	A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441649	A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI441501	A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI440749	A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI438206	A/swine/Virginia/A01432419/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433543	A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433536	A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433310	A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433300	A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI433292	A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI427186	A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426905	A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI426885	A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI424076	A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415974	A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415966	A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415958	A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415950	A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415942	A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415926	A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415918	A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415904	A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415896	A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415888	A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415880	A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415871	A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415862	A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415853	A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415846	A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415838	A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415830	A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415812	A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415804	A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415796	A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415779	A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415771	A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415762	A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415745	A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415737	A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415720	A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415685	A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415617	A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415573	A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415556	A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415548	A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415497	A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415481	A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415473	A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415465	A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415457	A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415449	A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415441	A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415433	A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415425	A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415415	A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415411	A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415403	A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415395	A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415387	A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415379	A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415371	A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415365	A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415357	A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415349	A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415341	A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415313	A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415289	A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415257	A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415249	A/swine/Ohio/11SW113/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415241	A/swine/Ohio/11SW112/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI415225	A/swine/Ohio/11SW108/2011 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414189	A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414173	A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI414154	A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408339	A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408330	A/swine/Indiana/A01432188/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408210	A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)
EPI408204	A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP)	1781.3	0.000000e+00	976/982 (99%)

niman · December 18, 2015

LOCUS       KU143670                1701 bp    cRNA    linear   VRL 13-DEC-2015
DEFINITION  Influenza A virus (A/swine/North Carolina/A01945753/2015(H3N2))
            segment 4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU143670
VERSION     KU143670.1  GI:960313812
KEYWORDS    .
SOURCE      Influenza A virus (A/swine/North Carolina/A01945753/2015(H3N2))
  ORGANISM  Influenza A virus (A/swine/North Carolina/A01945753/2015(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Lin,K., Huang,H. and Zhang,J.
  CONSRTM   USDA SIV Survelliance
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2015) National Veterinary Services Laboratory,
            USDA, 1920 Dayton, Ames, IA 50010, USA
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Influenza A virus (A/swine/North
                     Carolina/A01945753/2015(H3N2))"
                     /mol_type="viral cRNA"
                     /strain="A/swine/North Carolina/A01945753/2015"
                     /serotype="H3N2"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:1755986"
                     /segment="4"
                     /country="USA: North Carolina"
                     /collection_date="20-Oct-2015"
     gene            1..1701
                     /gene="HA"
     CDS             1..1701
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="ALR83292.1"
                     /db_xref="GI:960313813"
                     /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT
                     ITDDQIEVTNATELVQSSSTGKICNNPHQILDGKNCTLIDALLGDPHCDDFQNKKWDL
                     FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV
                     NSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV
                     IVSTKRSQQTVIPSIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI
                     QSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT
                     GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHQNSEGTGQAADLKSTQAAINQ
                     ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ
                     HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR
                     NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI
                     "
     sig_peptide     1..48
                     /gene="HA"
     mat_peptide     49..1035
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1036..1698
                     /gene="HA"
                     /product="HA2"
     misc_feature    1..1701
                     /db_xref="IRD:IRD-A01945753.4"
ORIGIN      
        1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttcca
       61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca
      121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctactga gctggtccag
      181 agttcctcaa caggtaaaat atgcaacaat cctcaccaaa tccttgatgg gaaaaattgc
      241 acattgatag atgctctatt gggggaccct cattgtgatg acttccaaaa caagaaatgg
      301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat
      361 tatgctaccc ttaggtcgct aattgcctca tctggcaacc tggaatttac ccaagaaagt
      421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttctgtt
      481 aacagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag
      541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac
      601 ccgggtacgg acaaagacca aaccaaccta tatgtccaag catcagggag agttatagtc
      661 tctaccaaaa gaagccaaca aactgtaatc ccgagtatcg ggtctagacc ctgggtaagg
      721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccaggaga catacttttg
      781 attaacagca cagggaatct aattgcccct cggggttact tcaaaataca aagtgggaaa
      841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca
      901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc
      961 tgtcccagat atgttaagca aaacaccctg aaattggcaa caggaatgcg gaatgtacca
     1021 gaaaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag
     1081 ggaatggtag acggttggta cggtttcagg catcagaatt ctgaaggcac aggacaagca
     1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta
     1201 atcaagaaaa cgaacgagaa atttcatcaa atcgaaaaag aattctcaga agtagaaggg
     1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac
     1321 gctgagcttc ttgttgccct ggagaaccaa catacaattg atttaaccga ctcagagatg
     1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgagaga atgctgagga catgggcaac
     1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat cagaaatgga
     1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca aatcaaaggt
     1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc
     1621 tttttgcttt gtgttgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt
     1681 aggtgcaaca tttgcattta a

Sign In

October 2015 North Carolina Swine Match 2012 Cases

Recommended Posts

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

niman

Please sign in to comment

Recently Browsing 0 members