niman Posted December 18, 2015 Report Share Posted December 18, 2015 USDA has released novel October 2015 H3N2v swine sequences with an H3 that matches 2012 cases and an N2 matching 2011 cases. Link to comment Share on other sites More sharing options...
niman Posted December 18, 2015 Author Report Share Posted December 18, 2015 LOCUS KU143683 1701 bp cRNA linear VRL 13-DEC-2015 DEFINITION Influenza A virus (A/swine/Ohio/A01857766/2015(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds. ACCESSION KU143683 VERSION KU143683.1 GI:960313905 KEYWORDS . SOURCE Influenza A virus (A/swine/Ohio/A01857766/2015(H3N2)) ORGANISM Influenza A virus (A/swine/Ohio/A01857766/2015(H3N2)) Viruses; ssRNA viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1701) AUTHORS Lin,K., Huang,H. and Zhang,J. CONSRTM USDA SIV Survelliance TITLE Direct Submission JOURNAL Submitted (12-NOV-2015) National Veterinary Services Laboratory, USDA, 1920 Dayton, Ames, IA 50010, USA FEATURES Location/Qualifiers source 1..1701 /organism="Influenza A virus (A/swine/Ohio/A01857766/2015(H3N2))" /mol_type="viral cRNA" /strain="A/swine/Ohio/A01857766/2015" /serotype="H3N2" /isolation_source="oral fluid" /host="swine" /db_xref="taxon:1755989" /segment="4" /country="USA: Ohio" /collection_date="14-Oct-2015" gene 1..1701 /gene="HA" CDS 1..1701 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ALR83309.1" /db_xref="GI:960313906" /translation="MKTIIAFSCILCLIFAQKLPGSDNSMATLCLGHHAVPNGTLVKT ITDDQIEVTNATELVQSSSTGRICNSPHQILDGKNCTLIDALLGDPHCDGFQNKKWDL FVERSTAYSNCYPYYVPDYATLRSLIASSGNLEFTQESFNWTGVAQDGSSYACRRGSV NSFFSRLNWLYNLNYKYPEQNVTMPNNDKFDKLYIWGVHHPGTDKDQTNLYVQASGRV IVSTKRSQQTVIPNIGSRPWVRGVSSIISIYWTIVKPGDILLINSTGNLIAPRGYFKI LSGKSSIMRSDAHIDECNSECITPNGSIPNDKPFQNVNKITYGACPRYVKQNTLKLAT GMRNVPEKQTRGIFGAIAGFIENGWEGMVDGWYGFRHHNSEGTGQAADLKSTQAAINQ ITGKLNRVIKKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQ HTIDLTDSEMSKLFERTRRQLRENAEDMGNGCFKIYHKCDNACIGSIRNGTYDHDIYR NEALNNRFQIKGVQLKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCNICI " sig_peptide 1..48 /gene="HA" mat_peptide 49..1035 /gene="HA" /product="HA1" mat_peptide 1036..1698 /gene="HA" /product="HA2" misc_feature 1..1701 /db_xref="IRD:IRD-A01857766.4" ORIGIN 1 atgaagacta tcattgcttt tagctgcatt ctatgtctga tttttgctca aaaacttccc 61 ggaagtgaca acagcatggc aacgctgtgc ctaggacacc acgcagtgcc aaacggaaca 121 ttagtgaaaa caatcacgga tgaccaaatt gaagtgacta atgctaccga gctggtccag 181 agttcctcaa caggtagaat atgcaacagt cctcaccaaa tccttgatgg gaaaaattgc 241 acactgatag atgctctatt gggggaccct cattgtgatg gcttccaaaa caagaaatgg 301 gacctttttg ttgaacgaag cacagcctac agcaactgtt acccttatta tgtgccagat 361 tatgctaccc ttaggtcact aattgcctca tcgggcaacc tggaatttac ccaagaaagc 421 ttcaattgga ctggagttgc tcaagacgga tcaagctatg cctgcagaag gggttcagtt 481 aacagtttct ttagtagatt gaattggttg tataacttga attacaagta tccagaacag 541 aacgtaacta tgccaaacaa tgacaaattt gacaaattgt acatttgggg ggttcaccac 601 ccgggtacgg acaaggacca aaccaaccta tatgtccaag catcagggag agttatagtc 661 tctaccaaaa gaagccaaca aactgtaatc ccgaatatcg ggtctagacc ctgggtaagg 721 ggtgtctcca gcataataag catctattgg acgatagtaa aaccgggaga catacttttg 781 attaatagca cagggaatct aattgcccct cggggttact tcaaaatact aagtgggaaa 841 agctcaataa tgagatcaga tgcacacatt gatgaatgca attctgaatg cattactcca 901 aatggaagca ttcccaatga caaacctttt caaaatgtaa acaagatcac atatggagcc 961 tgtcccagat atgttaagca aaacacccta aaattggcaa caggaatgcg gaatgtacca 1021 gagaagcaaa ctagaggcat attcggcgca attgcaggtt tcatagaaaa tggttgggag 1081 ggaatggtag acggttggta cggtttcagg catcacaatt ctgaaggcac aggacaagca 1141 gcagatctta aaagcactca agcggcaatc aaccaaatca ccgggaaact aaatagagta 1201 atcaagaaaa cgaacgagaa attccatcaa atcgaaaaag aattctcaga agtagaaggg 1261 agaattcagg acctagagaa atacgttgaa gacactaaaa tagatctctg gtcttacaac 1321 gctgagctcc ttgttgccct ggagaaccaa catacaattg acctaaccga ctcagagatg 1381 agcaaactgt tcgaaagaac aagaaggcaa ctgcgggaaa atgctgagga catgggcaat 1441 ggttgcttca aaatatacca caaatgtgac aacgcctgca taggatcaat tagaaatgga 1501 acttatgacc atgatatata cagaaacgag gcattaaaca atcggttcca gatcaaaggt 1561 gttcagctaa agtcaggata caaagattgg atcctatgga tttcctttgc catatcatgc 1621 tttttgcttt gtgtcgttct gctggggttc attatgtggg cctgccaaaa aggcaacatt 1681 aggtgcaaca tttgcattta a Link to comment Share on other sites More sharing options...
niman Posted December 18, 2015 Author Report Share Posted December 18, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI573017A/swine/Ohio/A01840053/2014 (A/H3N2) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI573003A/swine/Arkansas/A01555074/2014 (A/H3N2) segment 4 (HA)3109.00.000000e+001695/1701 (99%)EPI600470A/swine/Arkansas/A01476939/2014 (A/H3N2) segment 4 (HA)3105.30.000000e+001694/1701 (99%)EPI573495A/swine/Indiana/A01840133/2014 (A/H3N2) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI573486A/swine/Arkansas/A01555162/2014 (A/H3N2) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI573448A/swine/Indiana/A01840146/2014 (A/H3N2) segment 4 (HA)3103.50.000000e+001694/1701 (99%)EPI573445A/swine/Arkansas/A01840147/2014 (A/H3N2) segment 4 (HA)3099.80.000000e+001693/1701 (99%)EPI573602A/swine/Indiana/A01840254/2014 (A/H3N2) segment 4 (HA)3096.10.000000e+001692/1701 (99%)EPI573000A/swine/Arkansas/A01840096/2014 (A/H3N2) segment 4 (HA)3096.10.000000e+001692/1701 (99%)EPI669178A/swine/Indiana/A01260958/2015 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI584802A/swine/Indiana/A01841389/2015 (A/H3N2) segment 4 (HA)3092.40.000000e+001692/1701 (99%)EPI532373A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 4 (HA)3053.60.000000e+001685/1701 (99%)EPI573807A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 4 (HA)3049.90.000000e+001684/1701 (99%)EPI542447A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI534947A/swine/Iowa/A01501048/2014 (A/H3N2) segment 4 (HA)3048.10.000000e+001684/1701 (99%)EPI538664A/swine/Iowa/A01410752/2014 (A/H3N2) segment 4 (HA)3044.40.000000e+001683/1701 (98%)EPI623626A/swine/North Carolina/A02024129/2015 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI574154A/Kansas/A01377457/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI550293A/swine/Iowa/A01410971/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI531059A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI530996A/swine/Iowa/A01410600/2014 (A/H3N2) segment 4 (HA)3042.60.000000e+001683/1701 (98%)EPI597655A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001683/1702 (98%)EPI545416A/swine/North Carolina/A01478000/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI542551A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI538670A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI532376A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 4 (HA)3037.00.000000e+001682/1701 (98%)EPI542524A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 4 (HA)3033.30.000000e+001681/1701 (98%)EPI533782A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 4 (HA)3033.30.000000e+001681/1701 (98%)EPI593956A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI573350A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI572994A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI559548A/swine/North Carolina/A01476688/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI558839A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI558834A/swine/North Carolina/A01476730/2014 (A/H0) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI558819A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI550296A/swine/Iowa/A01410995/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI548259A/swine/Iowa/A01476428/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI545840A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI545407A/swine/Iowa/A01476267/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI510214A/swine/Illinois/A01475015/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI510211A/swine/Illinois/A01409994/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI510199A/swine/Illinois/A01410268/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI510190A/swine/Illinois/A01411463/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI510173A/swine/Illinois/A01411461/2014 (A/H0) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI507284A/swine/Illinois/A01411097/2014 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI505102A/swine/Iowa/A01409518/2013 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI504864A/swine/Illinois/A01411096/2013 (A/H0) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI460390A/swine/Indiana/A01260254/2013 (A/H3N2) segment 4 (HA)3031.50.000000e+001681/1701 (98%)EPI542548A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 4 (HA)3027.80.000000e+001680/1701 (98%)EPI586151A/swine/North Carolina/A01555667/2015 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI559025A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI558883A/swine/North Carolina/A01476771/2014 (A/H0) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI558842A/swine/North Carolina/A01477778/2014 (A/H0) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI545858A/swine/North Carolina/A01476419/2014 (A/H0) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI545852A/swine/Iowa/A01476426/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI545816A/swine/North Carolina/A01476354/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI545379A/swine/Iowa/A01476223/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI538990A/swine/Michigan/A01410962/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI530299A/swine/Illinois/A01410453/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI530284A/swine/Illinois/A01475190/2014 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI508836A/swine/Illinois/A01409932/2014 (A/H0) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI460381A/swine/Indiana/A01260284/2013 (A/H3N2) segment 4 (HA)3025.90.000000e+001680/1701 (98%)EPI597661A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 4 (HA)3022.20.000000e+001679/1701 (98%)EPI573035A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 4 (HA)3022.20.000000e+001679/1701 (98%)EPI508858A/swine/Illinois/A01410110/2014 (A/H3N2) segment 4 (HA)3022.20.000000e+001679/1701 (98%)EPI584808A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI573793A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI573599A/swine/Indiana/A01840253/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI542563A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI542542A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI530309A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI505062A/swine/Illinois/A01409657/2014 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI460387A/swine/Indiana/A01260252/2013 (A/H3N2) segment 4 (HA)3020.40.000000e+001680/1702 (98%)EPI460372A/swine/Indiana/A01260276/2013 (A/H3N2) segment 4 (HA)3020.40.000000e+001679/1701 (98%)EPI623700A/swine/Indiana/A01260863/2015 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI600344A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI586038A/swine/Illinois/A01555570/2015 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI573479A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI573020A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI559533A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI557544A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI557542A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI545813A/swine/North Carolina/A01476367/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI542530A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI531097A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI505039A/swine/Illinois/A01410018/2013 (A/H0) segment 4 (HA)3014.90.000000e+001678/1701 (98%)EPI558851A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 4 (HA)3013.00.000000e+001676/1699 (98%)EPI542474A/swine/Kansas/018050-1/2014 (A/H3N2) segment 4 (HA)3013.00.000000e+001675/1698 (98%)EPI620523A/swine/Iowa/A02076873/2015 (A/H3N2) segment 4 (HA)3011.20.000000e+001677/1701 (98%)EPI600449A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 4 (HA)3011.20.000000e+001677/1701 (98%)EPI600431A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 4 (HA)3011.20.000000e+001677/1701 (98%)EPI669209A/swine/North Carolina/A01857100/2015 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI623703A/swine/Indiana/A01260882/2015 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI598964A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI584734A/swine/Illinois/A01555638/2015 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI573818A/swine/North Carolina/A01555273/2015 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI557534A/Wisconsin/24/2014 (A/H3N2) segment 4 (HA)3009.30.000000e+001677/1701 (98%)EPI573452A/swine/Iowa/A01555142/2014 (A/H3N2) segment 4 (HA)3005.60.000000e+001676/1701 (98%)EPI573011A/swine/Arkansas/A01555090/2014 (A/H3N2) segment 4 (HA)3005.60.000000e+001676/1701 (98%)EPI398672A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI391413A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI391404A/swine/Ohio/A01203186/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI366030A/Utah/10/2012 (A/H3N2) segment 4 (HA)3005.60.000000e+001675/1699 (98%)EPI672951A/swine/North Carolina/A01945243/2015 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI669154A/swine/North Carolina/A02025678/2015 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI642513A/Michigan/39/2015 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI620526A/swine/Iowa/A02077538/2015 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI612571A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI559530A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI509764A/swine/Indiana/A01260416/2013 (A/H3N2) segment 4 (HA)3003.80.000000e+001676/1701 (98%)EPI623651A/swine/Illinois/A02076874/2015 (A/H3N2) segment 4 (HA)3001.90.000000e+001675/1701 (98%)EPI590659A/swine/North Carolina/A01841712/2015 (A/H3N2) segment 4 (HA)3001.90.000000e+001675/1701 (98%)EPI396270A/Indiana/133/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI394913A/Indiana/132/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388332A/Utah/10/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI388327A/Indiana/14/2012 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI342603A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA)3000.10.000000e+001674/1699 (98%)EPI669224A/swine/North Carolina/A01857097/2015 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI663334A/swine/North Carolina/A01770073/2015 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI620514A/swine/Iowa/A02076659/2015 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI559527A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI558822A/swine/Indiana/A01476743/2014 (A/H3N2) segment 4 (HA)2998.20.000000e+001675/1701 (98%)EPI647569A/swine/North Carolina/A02035784/2015 (A/H3N2) segment 4 (HA)2996.40.000000e+001674/1701 (98%)EPI600347A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 4 (HA)2996.40.000000e+001674/1701 (98%)EPI573566A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI573051A/swine/Iowa/A01840061/2014 (A/H3N2) segment 4 (HA)2994.50.000000e+001674/1701 (98%)EPI528431A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI527870A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI527113A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI453427A/swine/Korea/D79/2011 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI453426A/swine/Korea/A18/2011 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI451202A/swine/Alabama/A01104056/2012 (A/H0) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446888A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446879A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI446800A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI443550A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI426887A/swine/Iowa/A01432271/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI414186A/swine/Indiana/A00968394/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI414170A/swine/Indiana/A00968398/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI408202A/swine/Indiana/A01260099/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI406576A/swine/Iowa/A01203863/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI406504A/swine/Iowa/A01267939/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI404890A/Iowa/16/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI401609A/swine/Ohio/A00138552/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397913A/Indiana/123/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397906A/Illinois/11/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397905A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397662A/Maryland/28/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397396A/Indiana/93/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397210A/Maryland/25/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI397006A/Ohio/78/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396262A/Indiana/127/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI396254A/Indiana/126/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395883A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI395259A/Ohio/35/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI394944A/Maryland/22/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI393306A/Indiana/18/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI392926A/Maryland/20/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI388352A/Indiana/20/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI388346A/Indiana/15/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI388298A/Indiana/19/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI388282A/Indiana/13/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI383528A/swine/Indiana/A01203509/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI381873A/Hawaii/03/2012 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI346493A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI339171A/Maine/06/2011 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI317003A/swine/Indiana/A0109091/2010 (A/H3N2) segment 4 (HA)2994.50.000000e+001673/1699 (98%)EPI672887A/swine/North Carolina/A01945112/2015 (A/H3N2) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI671792A/swine/Illinois/A01857433/2015 (A/H3N2) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI663380A/swine/North Carolina/A02025575/2015 (A/H3N2) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI647584A/swine/North Carolina/A02025402/2015 (A/H3N2) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI573439A/swine/Missouri/A01555163/2014 (A/H3N2) segment 4 (HA)2992.70.000000e+001674/1701 (98%)EPI398492A/swine/Maryland/A01104048/2012 (A/H3N2) segment 4 (HA)2990.80.000000e+001672/1699 (98%)EPI395331A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)2990.80.000000e+001672/1699 (98%)EPI395328A/West Virginia/06/2011 (A/H3N2) segment 4 (HA)2990.80.000000e+001672/1699 (98%)EPI653868A/swine/Illinois/A00857134/2011 (A/H0) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI653857A/swine/Illinois/A00857131/2011 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI653774A/swine/Illinois/A00857129/2011 (A/H0) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI645058A/swine/Indiana/A01260926/2015 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI493012A/swine/Kansas/A01377090/2013 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI492349A/swine/Indiana/A00968364/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI457163A/swine/Indiana/9622/2011 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI446927A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI446919A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI446863A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI446830A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI443558A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI443526A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI433540A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI433533A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI433306A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI433298A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI426890A/swine/Indiana/A01432300/2013 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI424073A/swine/Michigan/A01259003/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI414178A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI414156A/swine/Iowa/A01244302/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI408199A/swine/Indiana/A01260093/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI406530A/swine/Illinois/A01432127/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI401702A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI401684A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI401680A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI401667A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI400105A/swine/Indiana/A00968308/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398542A/swine/Ohio/A00152576/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398534A/swine/Ohio/A01208457/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398526A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398518A/swine/Ohio/A01133464/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398500A/swine/Ohio/A01133466/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI398479A/swine/Maryland/A01104040/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397969A/Wisconsin/34/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397962A/Wisconsin/30/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397954A/Ohio/85/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397939A/Ohio/41/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397548A/Ohio/84/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397540A/Ohio/56/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397532A/Ohio/47/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397524A/Ohio/44/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397516A/Ohio/36/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397503A/Indiana/104/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397446A/Wisconsin/31/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397432A/Ohio/81/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397426A/Minnesota/15/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397385A/Indiana/138/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397351A/Ohio/37/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397340A/Indiana/150/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI397089A/Indiana/52/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396299A/Maryland/23/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396280A/Indiana/144/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396208A/Indiana/149/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396192A/Ohio/77/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396183A/Indiana/77/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI396175A/Ohio/80/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395874A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395866A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395718A/swine/Indiana/A01104023/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395711A/swine/Indiana/A01104016/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395357A/Pennsylvania/17/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395344A/Wisconsin/28/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395270A/Pennsylvania/11/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI395267A/Ohio/65/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI394937A/Ohio/75/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI394933A/Wisconsin/23/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI394921A/Ohio/69/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI394077A/Wisconsin/27/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393914A/swine/Indiana/A00968380/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393782A/Ohio/74/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393702A/Ohio/64/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393695A/West Virginia/16/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393681A/West Virginia/10/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%)EPI393673A/Ohio/71/2012 (A/H3N2) segment 4 (HA)2989.00.000000e+001672/1699 (98%) Link to comment Share on other sites More sharing options...
niman Posted December 18, 2015 Author Report Share Posted December 18, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI620636A/swine/Iowa/A02076564/2015 (A/H1N2) segment 6 (NA)2577.20.000000e+001405/1410 (99%)EPI623673A/swine/Iowa/A02076596/2015 (A/H1N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI600393A/swine/Iowa/A01555010/2014 (A/H1N2) segment 6 (NA)2571.70.000000e+001404/1410 (99%)EPI573576A/swine/Iowa/A01469372/2014 (A/H1N2) segment 6 (NA)2560.60.000000e+001402/1410 (99%)EPI542540A/swine/Iowa/A01476152/2014 (A/H1N2) segment 6 (NA)2560.60.000000e+001402/1410 (99%)EPI672955A/swine/Iowa/A01795227/2015 (A/H1N2) segment 6 (NA)2544.00.000000e+001399/1410 (99%)EPI544936A/swine/Iowa/13H091/2013 (A/H0) segment 6 (NA)2538.40.000000e+001398/1410 (99%)EPI492376A/swine/Iowa/A01399987/2013 (A/H1N2) segment 6 (NA)2538.40.000000e+001398/1410 (99%)EPI489714A/swine/Minnesota/A01394042/2013 (A/H1N2) segment 6 (NA)2538.40.000000e+001398/1410 (99%)EPI574168A/swine/Iowa/A01469493/2015 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI528420A/swine/Texas/13TOSU6273/2013 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI526954A/swine/Texas/13TOSU6276/2013 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI506609A/swine/Nebraska/A01490415/2014 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI506603A/swine/Nebraska/A01490535/2014 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI506600A/swine/Nebraska/A01490456/2014 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI506597A/swine/Nebraska/A01490540/2014 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI505004A/swine/Nebraska/A01490219/2013 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI499931A/swine/Iowa/13H072/2013 (A/H1N2) segment 6 (NA)2532.90.000000e+001397/1410 (99%)EPI506272A/swine/Minnesota/A01395979/2013 (A/H1N2) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI506263A/swine/Minnesota/A01395969/2013 (A/H1N2) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI499765A/swine/Iowa/A01290752/2013 (A/H0) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI460086A/swine/Minnesota/A01380666/2013 (A/H1N2) segment 6 (NA)2521.80.000000e+001395/1410 (98%)EPI558872A/swine/Illinois/A01477750/2014 (A/H0) segment 6 (NA)2505.20.000000e+001392/1410 (98%)EPI371322A/swine/Minnesota/A01116842/2011 (A/H1N2) segment 6 (NA)2501.50.000000e+001391/1410 (98%)EPI476523A/swine/Minnesota/A01398642/2013 (A/H1N2) segment 6 (NA)2499.60.000000e+001391/1410 (98%)EPI384480A/swine/Minnesota/A01116840/2011 (A/H1N2) segment 6 (NA)2499.60.000000e+001389/1407 (98%)EPI669317A/swine/Indiana/14TOSU0028/2014 (A/H1N2) segment 6 (NA)2479.30.000000e+001386/1408 (98%)EPI669300A/swine/Indiana/14TOSU0032/2014 (A/H1N2) segment 6 (NA)2479.30.000000e+001386/1408 (98%)EPI641453A/swine/Minnesota/A01823149/2015 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI621571A/swine/Iowa/A01822306/2015 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI621565A/swine/Iowa/A01822318/2015 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI621562A/swine/Iowa/A01822297/2015 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI620482A/swine/Minnesota/A01847873/2015 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI600447A/swine/Iowa/A01476909/2014 (A/H1N2) segment 6 (NA)2477.50.000000e+001387/1410 (98%)EPI669698A/swine/Ohio/14TOSU23771/2014 (A/H1N2) segment 6 (NA)2473.80.000000e+001385/1408 (98%)EPI669422A/swine/Ohio/14TOSU23764/2014 (A/H1N2) segment 6 (NA)2473.80.000000e+001385/1408 (98%)EPI546931A/swine/Indiana/A01260587/2014 (A/H1N2) segment 6 (NA)2473.80.000000e+001385/1408 (98%)EPI586051A/swine/Nebraska/A01555575/2015 (A/H1N2) segment 6 (NA)2471.90.000000e+001387/1411 (98%)EPI584797A/swine/Iowa/A01840985/2015 (A/H1N2) segment 6 (NA)2460.90.000000e+001384/1410 (98%)EPI623642A/swine/Iowa/A02077617/2015 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI612569A/swine/Iowa/A02076301/2015 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI584806A/swine/Iowa/A01840987/2015 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI371332A/swine/Minnesota/A01201294/2011 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI341743A/swine/Iowa/A01202063/2011 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI338587A/swine/Iowa/A01049863/2011 (A/H1N2) segment 6 (NA)2449.80.000000e+001382/1410 (98%)EPI371310A/swine/Minnesota/A01047911/2010 (A/H1N2) segment 6 (NA)2446.10.000000e+001381/1410 (97%)EPI663372A/swine/Iowa/A02025591/2015 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI559398A/swine/Indiana/28-0202/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI559388A/swine/Indiana/28-0210/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI559298A/swine/Indiana/28-0223/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI399610A/swine/Pennsylvania/A01076779/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI399563A/swine/Pennsylvania/A01076777/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI391079A/swine/Iowa/A01202576/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI391073A/swine/Minnesota/A01202471/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI391052A/swine/Iowa/A01202087/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI390950A/swine/Ohio/A01049357/2010 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI384281A/swine/Minnesota/A01047910/2010 (A/H1N2) segment 6 (NA)2444.20.000000e+001379/1407 (98%)EPI384278A/swine/Minnesota/A01047909/2010 (A/H1N2) segment 6 (NA)2444.20.000000e+001379/1407 (98%)EPI371331A/swine/Minnesota/A01201102/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI369160A/swine/Illinois/A01134703/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI369159A/swine/Illinois/A01134654/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI369156A/swine/Illinois/A01134482/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI347612A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI338586A/swine/Iowa/A01049864/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI338584A/swine/Iillinois/A01049872/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI338568A/swine/Minnesota/A01049956/2011 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI317022A/swine/Iowa/A01049071/2010 (A/H1N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI314799A/swine/Pennsylvania/602170-3/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI314797A/swine/Pennsylvania/602170-1/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI291871A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI291869A/Pennsylvania/14/2010 (A/H3N2) segment 6 (NA)2444.20.000000e+001381/1410 (97%)EPI391191A/swine/Iowa/A01202677/2011 (A/H1N2) segment 6 (NA)2440.50.000000e+001380/1410 (97%)EPI367693A/swine/Minnesota/A01047500/2010 (A/H1N2) segment 6 (NA)2440.50.000000e+001380/1410 (97%)EPI653871A/swine/Illinois/A00857134/2011 (A/H0) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI653860A/swine/Illinois/A00857131/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI653771A/swine/Illinois/A00857129/2011 (A/H0) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI584491A/swine/Michigan/A01202035/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI559340A/swine/Indiana/28-0410/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001378/1407 (97%)EPI559314A/swine/Indiana/28-0415/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001378/1407 (97%)EPI559310A/swine/Indiana/28-0419/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001378/1407 (97%)EPI415678A/swine/Ohio/11SW195/2011 (A/H0) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI415266A/swine/Ohio/11SW115/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI399584A/swine/Minnesota/A01327667/2012 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI391418A/swine/Iowa/A01202879/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI391384A/swine/Iowa/A01202878/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI391128A/swine/Iowa/A01202639/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI391122A/swine/Iowa/A01202529/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI390783A/swine/Minnesota/A01076123/2010 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI390782A/swine/Minnesota/A01076122/2010 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI384578A/swine/Illinois/A01116719/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001378/1407 (97%)EPI384530A/swine/Illinois/A01134851/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001378/1407 (97%)EPI371325A/swine/Minnesota/A01134248/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI371324A/swine/Minnesota/A01134236/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI369050A/swine/Illinois/A00857138b/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI369039A/swine/Illinois/A00857138a/2011 (A/H0) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI369024A/swine/Illinois/A00857300/2011 (A/H0) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI367809A/swine/Pennsylvania/A01047912/2010 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI351656A/swine/Iowa/A01202640/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI341750A/swine/Michigan/A01202036/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI341749A/swine/Michigan/A01202037/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI338567A/swine/Indiana/A01049964/2011 (A/H1N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI338447A/swine/Indiana/A01049653/2011 (A/H3N2) segment 6 (NA)2438.70.000000e+001380/1410 (97%)EPI399602A/swine/Illinois/A01240908/2012 (A/H3N2) segment 6 (NA)2435.00.000000e+001379/1410 (97%)EPI615608A/swine/Illinois/A01047046/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI615557A/swine/Illinois/A01047045/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI559278A/swine/Indiana/28-0403/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI489142A/swine/North Carolina/SG1391/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI461426A/swine/Ohio/11SW233/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI461419A/swine/Ohio/11SW149/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI461393A/swine/Ohio/11SW208/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459606A/swine/Ohio/11SW144/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459598A/swine/Ohio/11SW121/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459590A/swine/Ohio/11SW127/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459534A/swine/Ohio/11SW349/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459495A/swine/Ohio/11SW162/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459487A/swine/Ohio/11SW133/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI459465A/swine/Ohio/11SW344/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415967A/swine/Ohio/11SW347/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415831A/swine/Ohio/11SW218/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415822A/swine/Ohio/11SW217/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415797A/swine/Ohio/11SW213/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415772A/swine/Ohio/11SW209/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415713A/swine/Ohio/11SW201/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415652A/swine/Ohio/11SW189/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415642A/swine/Ohio/11SW187/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415634A/swine/Ohio/11SW186/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415626A/swine/Ohio/11SW185/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415600A/swine/Ohio/11SW180/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415565A/swine/Ohio/11SW174/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415531A/swine/Ohio/11SW170/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415523A/swine/Ohio/11SW169/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415516A/swine/Ohio/11SW168/2011 (A/H0) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415506A/swine/Ohio/11SW166/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415490A/swine/Ohio/11SW161/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415482A/swine/Ohio/11SW146/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415474A/swine/Ohio/11SW140/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415466A/swine/Ohio/11SW139/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415458A/swine/Ohio/11SW138/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415450A/swine/Ohio/11SW137/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415442A/swine/Ohio/11SW136/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415434A/swine/Ohio/11SW135/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415426A/swine/Ohio/11SW134/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415412A/swine/Ohio/11SW132/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415404A/swine/Ohio/11SW131/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415396A/swine/Ohio/11SW130/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415388A/swine/Ohio/11SW129/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415380A/swine/Ohio/11SW128/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415372A/swine/Ohio/11SW126/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415366A/swine/Ohio/11SW125/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415358A/swine/Ohio/11SW124/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415350A/swine/Ohio/11SW123/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415342A/swine/Ohio/11SW122/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415290A/swine/Ohio/11SW87/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415274A/swine/Ohio/11SW118/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI415234A/swine/Ohio/11SW109/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI398914A/swine/Illinois/A01134651/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391426A/swine/Iowa/A01203126/2012 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391425A/swine/Iowa/A01203125/2012 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391124A/swine/Iowa/A01202573/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391090A/swine/Indiana/A01202632/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391089A/swine/Indiana/A01202631/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391074A/swine/Minnesota/A01202472/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI390951A/swine/Ohio/A01049382/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI384551A/swine/Illinois/A01134656/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI384503A/swine/Minnesota/A01134235/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI384500A/swine/Minnesota/A01134221/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI384443A/swine/Minnesota/A01116288/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI384415A/swine/Illinois/A01047397/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI384336A/swine/Minnesota/A01116364/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001377/1407 (97%)EPI371329A/swine/Minnesota/A01134593/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI371323A/swine/Minnesota/A01134226/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI369161A/swine/Illinois/A01134715/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI369158A/swine/Illinois/A01134653/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI369066A/swine/Illinois/A00857304b/2012 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI369058A/swine/Illinois/A00857304a/2012 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367700A/swine/Illinois/A01047108/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367692A/swine/Illinois/A01047363/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367691A/swine/Illinois/A01047353/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367690A/swine/Illinois/A01047348/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367689A/swine/Illinois/A01047177/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367688A/swine/Illinois/A01047172/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367687A/swine/Illinois/A01047166/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367686A/swine/Illinois/A01047162/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367685A/swine/Illinois/A01047155/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367684A/swine/Illinois/A01047153/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367683A/swine/Illinois/A01047149/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367682A/swine/Illinois/A01047145/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367681A/swine/Illinois/A01047112/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367680A/swine/Illinois/A01047099/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367679A/swine/Illinois/A01047097/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367678A/swine/Illinois/A01047089/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367677A/swine/Illinois/A01047085/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367674A/swine/Illinois/A01047042/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367673A/swine/Illinois/A01047041/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367672A/swine/Illinois/A01047024/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI367671A/swine/Illinois/A01047020/2010 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI344396A/Indiana/10/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI344388A/Indiana/10/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338597A/swine/Indiana/A01049744/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338596A/swine/Indiana/A01049745/2011 (A/H3N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338590A/swine/Indiana/A01049794/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338583A/swine/Iowa/A01049887/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338451A/swine/Iowa/A01049644/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI338449A/swine/Iowa/A01049646/2011 (A/H1N2) segment 6 (NA)2433.20.000000e+001379/1410 (97%)EPI391051A/swine/Iowa/A01202086/2011 (A/H1N2) segment 6 (NA)2431.30.000000e+001378/1410 (97%)EPI384302A/swine/Minnesota/A01047499/2010 (A/H1N2) segment 6 (NA)2431.30.000000e+001376/1406 (97%)EPI341756A/swine/Iowa/A01049970/2011 (A/H1N2) segment 6 (NA)2431.30.000000e+001378/1410 (97%)EPI489072A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 6 (NA)2429.50.000000e+001377/1408 (97%)EPI615601A/swine/Iowa/A01202444/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI615550A/swine/Illinois/A01047044/2010 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI506435A/swine/Indiana/A00968332/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI492955A/swine/Indiana/A00968349/2011 (A/H0) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI489086A/swine/Arkansas/SG1378/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI461385A/swine/Ohio/11SW238/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI459572A/swine/Ohio/11SW230/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI459527A/swine/Ohio/11SW177/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI459519A/swine/Ohio/11SW223/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI457170A/swine/Ohio/11SW208/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI439894A/swine/Wyoming/A01445305/2013 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415959A/swine/Ohio/11SW240/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415951A/swine/Ohio/11SW239/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415943A/swine/Ohio/11SW237/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415935A/swine/Ohio/11SW236/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415927A/swine/Ohio/11SW235/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415919A/swine/Ohio/11SW234/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415911A/swine/Ohio/11SW232/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415905A/swine/Ohio/11SW231/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415897A/swine/Ohio/11SW229/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415889A/swine/Ohio/11SW228/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415881A/swine/Ohio/11SW227/2011 (A/H0) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415872A/swine/Ohio/11SW226/2011 (A/H0) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415863A/swine/Ohio/11SW225/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415854A/swine/Ohio/11SW224/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415847A/swine/Ohio/11SW221/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415839A/swine/Ohio/11SW220/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415813A/swine/Ohio/11SW216/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415805A/swine/Ohio/11SW215/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415788A/swine/Ohio/11SW211/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415780A/swine/Ohio/11SW210/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415746A/swine/Ohio/11SW205/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415738A/swine/Ohio/11SW204/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415721A/swine/Ohio/11SW202/2011 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415694A/swine/Ohio/11SW197/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415660A/swine/Ohio/11SW191/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415608A/swine/Ohio/11SW183/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415592A/swine/Ohio/11SW179/2011 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415584A/swine/Ohio/11SW178/2011 (A/H0) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI415541A/swine/Ohio/11SW171/2011 (A/H0) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI399248A/swine/Illinois/A01327348/2012 (A/H1N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%)EPI399021A/swine/Illinois/A01241916/2012 (A/H3N2) segment 6 (NA)2427.60.000000e+001378/1410 (97%) Link to comment Share on other sites More 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niman Posted December 18, 2015 Author Report Share Posted December 18, 2015 DescriptionsAlignSegment-IDNameScoreE-ValueIdentityEPI669181A/swine/Indiana/A01260958/2015 (A/H3N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI600387A/swine/Indiana/A01477819/2014 (A/H3N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI572999A/swine/Arkansas/A01840027/2014 (A/H3N2) segment 7 (MP)1803.50.000000e+00980/982 (99%)EPI669717A/swine/Indiana/14TOSU0001/2014 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669714A/swine/Ohio/14TOSU0158/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669687A/swine/Ohio/14TOSU0566/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669679A/swine/Indiana/14TOSU8050/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669678A/swine/Indiana/14TOSU0342/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669663A/swine/Ohio/14TOSU21817/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669653A/swine/Indiana/14TOSU8041/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669637A/swine/Ohio/14TOSU0422/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669633A/swine/Ohio/14TOSU0463/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669624A/swine/Ohio/14TOSU21811/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669608A/swine/Ohio/14TOSU0563/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669591A/swine/Indiana/14TOSU0011/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669541A/swine/Ohio/14TOSU0435/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669531A/swine/Ohio/14TOSU21800/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669469A/swine/Indiana/14TOSU0343/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669423A/swine/Ohio/14TOSU21805/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669419A/swine/Ohio/14TOSU21815/2014 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669407A/swine/Indiana/14TOSU0235/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669397A/swine/Indiana/14TOSU3013/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669396A/swine/Indiana/14TOSU8019/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669387A/swine/Ohio/14TOSU21806/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669386A/swine/Ohio/14TOSU21808/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669364A/swine/Indiana/14TOSU0374/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669330A/swine/Ohio/14TOSU0143/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669327A/swine/Indiana/14TOSU0226/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669324A/swine/Indiana/14TOSU0231/2014 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669319A/swine/Indiana/14TOSU2891/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669315A/swine/Ohio/14TOSU21839/2014 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669311A/swine/Ohio/14TOSU21812/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669307A/swine/Ohio/14TOSU21816/2014 (A/H0) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669304A/swine/Ohio/14TOSU21801/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI669301A/swine/Indiana/14TOSU0364/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI620531A/swine/Minnesota/A01847108/2015 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI620495A/swine/Iowa/A02077555/2015 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI590775A/swine/South Dakota/A01841915/2015 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI568724A/swine/Arkansas/A01840187/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI568718A/swine/Illinois/A01555180/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI568688A/swine/Arkansas/A01840185/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI546925A/swine/North Dakota/A01104084/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545812A/swine/Indiana/A01476391/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545372A/swine/Iowa/A01476238/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545270A/swine/Minnesota/A01565076/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI545142A/swine/Indiana/A01260591/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI544948A/swine/Minnesota/A01503773/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI544945A/swine/Minnesota/A01503777/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI544942A/swine/Minnesota/A01503779/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI544810A/swine/Minnesota/A01503781/2014 (A/H3N2) segment 7 (MP)1797.90.000000e+00979/982 (99%)EPI620592A/swine/Illinois/A02076652/2015 (A/H3N2) segment 7 (MP)1794.20.000000e+00978/982 (99%)EPI600463A/swine/Illinois/A01555038/2014 (A/H3N2) segment 7 (MP)1794.20.000000e+00978/982 (99%)EPI573483A/swine/Arkansas/A01840240/2014 (A/H3N2) segment 7 (MP)1794.20.000000e+00978/982 (99%)EPI573465A/swine/Arkansas/A01555210/2014 (A/H3N2) segment 7 (MP)1794.20.000000e+00978/982 (99%)EPI669694A/swine/Ohio/14TOSU0133/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI669667A/swine/Ohio/14TOSU21818/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI669455A/swine/Indiana/14TOSU0006/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI669295A/swine/Ohio/14TOSU0122/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI641460A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI623677A/swine/Illinois/A01554952/2015 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI586105A/swine/Iowa/A01470314/2015 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI545830A/swine/Iowa/A01476395/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI545775A/swine/Minnesota/A01565290/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI533920A/swine/Iowa/A01481221/2014 (A/H3N2) segment 7 (MP)1792.40.000000e+00978/982 (99%)EPI620625A/swine/Arkansas/A01554688/2015 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI597651A/swine/Iowa/A01476858/2014 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI573343A/swine/Minnesota/A01567014/2014 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI548243A/swine/Iowa/A01476456/2014 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI347605A/Iowa/08/2011 (A/H3N2) segment 7 (MP)1786.80.000000e+00977/982 (99%)EPI663342A/swine/Iowa/A01769394/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI623680A/swine/Iowa/A01822197/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI621569A/swine/Iowa/A01822175/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI621548A/swine/Iowa/A01822205/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI620471A/swine/Iowa/A01847871/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI612503A/swine/Minnesota/A01847477/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI612494A/swine/Minnesota/A01847455/2015 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI449017A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI433321A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI427146A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI427131A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI406513A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI395845A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI391459A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI390675A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI383548A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI347602A/Iowa/07/2011 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI346435A/Iowa/08/2011 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI346427A/Iowa/07/2011 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI346419A/Iowa/09/2011 (A/H3N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI341736A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP)1781.30.000000e+00976/982 (99%)EPI539162A/Ohio/02/2014 (A/H3N2) segment 7 (MP)1777.60.000000e+00968/971 (99%)EPI492963A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI492380A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI489727A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI472194A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI461427A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI461420A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI461386A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459607A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459599A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459591A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459573A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459535A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459520A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459499A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459488A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI459466A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457158A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457150A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457142A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457134A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457126A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI457118A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI453430A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI441649A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI441498A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI433310A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI433271A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI426874A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415974A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415966A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415958A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415950A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415942A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415926A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415918A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415904A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415896A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415888A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415880A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415871A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415862A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415853A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415846A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415838A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415830A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415812A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415804A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415796A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415779A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415771A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415762A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415745A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415737A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415720A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415685A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415617A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415573A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415556A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415548A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415497A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415481A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415473A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415465A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415457A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415449A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415441A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415433A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415425A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415415A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415411A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415403A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415395A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415387A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415379A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415371A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415365A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415357A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415349A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415341A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415313A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415289A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415257A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415249A/swine/Ohio/11SW113/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415241A/swine/Ohio/11SW112/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI415225A/swine/Ohio/11SW108/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414110A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414104A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414053A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414050A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI414038A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI408330A/swine/Indiana/A01432188/2012 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI408198A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI407026A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI406668A/swine/Iowa/A01203977/2012 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI406535A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI398690A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI397414A/Michigan/23/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI397342A/Michigan/19/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI395346A/Michigan/20/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI395329A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI395324A/West Virginia/06/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391475A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391470A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391144A/swine/Indiana/A01202621/2011 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI391142A/swine/Indiana/A01202632/2011 (A/H1N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI390882A/swine/Michigan/A01203374/2012 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI390881A/swine/Indiana/A01203372/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI390671A/swine/Indiana/A01243255/2012 (A/H1N1) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI388330A/Utah/10/2012 (A/H3N2) segment 7 (MP)1775.80.000000e+00975/982 (99%)EPI433327A/swine/Wyoming/A01444566/2013 (A/H3N2) segment 7 (MP)1772.10.000000e+00974/982 (99%)EPI620604A/swine/Iowa/A02076786/2015 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI584851A/swine/Nebraska/A01489870/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI584830A/swine/Nebraska/A01489868/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI546902A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI541963A/Ohio/4319/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00964/967 (99%)EPI539063A/swine/Nebraska/A01501767/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI532390A/swine/Illinois/A01411761/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI527873A/swine/Ohio/13TOSU2043/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI527116A/swine/Ohio/13TOSU2052/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI526872A/swine/Minnesota/A01480518/2014 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI505095A/swine/Nebraska/A01409647/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI501539A/swine/South Dakota/A01366063/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI499646A/swine/Iowa/A01290671/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492657A/swine/Nebraska/A01394342/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492356A/swine/Indiana/A00968365/2012 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI492351A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI487955A/swine/Indiana/A01260366/2013 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI487944A/swine/Minnesota/A01394278/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI476530A/swine/Illinois/A01398587/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI472154A/swine/Wyoming/A01397389/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI467890A/swine/Nebraska/A01397576/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI464431A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI461446A/swine/Wyoming/A01381202/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI453429A/swine/Korea/A18/2011 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI451230A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI451185A/swine/Pennsylvania/A01432652/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI451178A/swine/Wyoming/A01379327/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI451175A/swine/Wyoming/A01379354/2013 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446881A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446873A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446857A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446832A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446824A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI446733A/swine/Ohio/A01349572/2013 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI438228A/swine/Indiana/A01260209/2013 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI427201A/swine/Indiana/A01260183/2012 (A/H1N1) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI416865A/swine/Iowa/A01432207/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI415934A/swine/Ohio/11SW236/2011 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI415703A/swine/Ohio/11SW200/2011 (A/H0) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI414181A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI407274A/Minnesota/18/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401715A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401659A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401615A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI401145A/swine/North Carolina/A01270509/2012 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI399472A/swine/North Carolina/A01300820/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI399378A/swine/North Carolina/A01300819/2012 (A/H1N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI398545A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%)EPI398537A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP)1770.20.000000e+00974/982 (99%) Link to comment Share on other sites More sharing options...
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