niman Posted September 12, 2016 Author Report Posted September 12, 2016 Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KX380262.1| Zika virus isolate MS10-2016 envelope protein gene, partial cds 2727 2727 100% 0.0 100% KX380262.1 Select seq gb|KX447520.1| Zika virus isolate 1_0016_PF polyprotein gene, partial cds 2713 2713 100% 0.0 99% KX447520.1 Select seq gb|KX447519.1| Zika virus isolate 1_0199_PF polyprotein gene, partial cds 2713 2713 100% 0.0 99% KX447519.1 Select seq gb|KX447518.1| Zika virus isolate 1_0117_PF polyprotein gene, partial cds 2713 2713 100% 0.0 99% KX447518.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 2713 2713 100% 0.0 99% KX447513.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 2713 2713 100% 0.0 99% KX447510.1 Select seq gb|KX576684.1| Zika virus vector pZIKV-ICD, complete sequence 2713 2713 100% 0.0 99% KX576684.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 2713 2713 100% 0.0 99% KX369547.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 2713 2713 100% 0.0 99% KX280026.1 Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 2713 2713 100% 0.0 99% KX262887.1 Select seq gb|KX216638.1| Zika virus isolate ESS23-2015 envelope protein gene, partial cds 2709 2709 100% 0.0 99% KX216638.1 Select seq gb|KX216637.1| Zika virus isolate GS29-2016 envelope protein gene, partial cds 2709 2709 100% 0.0 99% KX216637.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 2709 2709 100% 0.0 99% KX694534.1 Select seq gb|KX447521.1| Zika virus isolate 1_0080_PF polyprotein gene, partial cds 2709 2709 100% 0.0 99% KX447521.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447511.1 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447509.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 2709 2709 100% 0.0 99% KX446951.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX247632.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 2709 2709 100% 0.0 99% KX051563.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 2709 2709 100% 0.0 99% KU509998.3 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 2709 2709 100% 0.0 99% KU991811.1 Select seq gb|KU646828.1| Zika virus isolate Si322 polyprotein gene, partial cds 2709 2709 100% 0.0 99% KU646828.1 Select seq gb|KX216635.1| Zika virus isolate TS17-2016 envelope protein gene, partial cds 2704 2704 100% 0.0 99% KX216635.1 Select seq gb|KX216634.1| Zika virus isolate TS14-2016 envelope protein gene, partial cds 2704 2704 100% 0.0 99% KX216634.1 Select seq gb|KX806557.1| Zika virus isolate TS17-2016, complete genome 2704 2704 100% 0.0 99% KX806557.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 2704 2704 100% 0.0 99% KX197205.1 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 2704 2704 100% 0.0 99% KJ776791.2 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447516.1 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447515.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447512.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 2704 2704 100% 0.0 99% KX446950.1 Select seq gb|KU758871.1| Zika virus isolate 17170 polyprotein gene, partial cds 2704 2704 100% 0.0 99% KU758871.1 Select seq gb|KU758870.1| Zika virus isolate 17160 polyprotein gene, partial cds 2704 2704 100% 0.0 99% KU758870.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 2704 2704 100% 0.0 99% KX247646.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 2704 2704 100% 0.0 99% KX198135.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 2704 2704 100% 0.0 99% KX197192.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 2704 2704 100% 0.0 99% KX156776.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 2704 2704 100% 0.0 99% KX156775.1 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 2704 2704 100% 0.0 99% KX156774.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 2704 2704 100% 0.0 99% KU870645.1 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 2704 2704 100% 0.0 99% KU922960.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 2704 2704 100% 0.0 99% KU922923.1 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 2704 2704 100% 0.0 99% KU729218.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 2704 2704 100% 0.0 99% KU527068.1 Select seq gb|KU646827.1| Zika virus isolate Si323 polyprotein gene, partial cds 2704 2704 100% 0.0 99% KU646827.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 2704 2704 100% 0.0 99% KU647676.1 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 2704 2704 100% 0.0 99% KU321639.1 Select seq gb|KX766028.1| Zika virus isolate R114916, complete genome 2702 2702 100% 0.0 99% KX766028.1 Select seq gb|KX216632.1| Zika virus isolate SIS58-2015 envelope protein gene, partial cds 2700 2700 100% 0.0 99% KX216632.1 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU820897.5 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 2700 2700 100% 0.0 99% KX766029.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 2700 2700 100% 0.0 99% KX447514.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KX520666.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU758877.1 Select seq gb|KU758873.1| Zika virus isolate 18246 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU758873.1 Select seq gb|KU758869.1| Zika virus isolate 05211 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU758869.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU937936.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 2700 2700 100% 0.0 99% KX087102.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 2700 2700 100% 0.0 99% KU940228.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 2700 2700 100% 0.0 99% KU926309.1 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 2700 2700 100% 0.0 99% KU497555.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU501217.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU501216.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU365778.1 Select seq gb|KU312315.1| Zika virus isolate Z1106027 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU312315.1 Select seq gb|KU312314.1| Zika virus isolate Z1106031 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU312314.1 Select seq gb|KX380263.1| Zika virus isolate FS92-2016 envelope protein gene, partial cds 2695 2695 100% 0.0 99% KX380263.1 Select seq gb|KX216640.1| Zika virus isolate CKS63-2014 envelope protein gene, partial cds 2695 2695 100% 0.0 99% KX216640.1 Select seq gb|KX216636.1| Zika virus isolate SS27-2016 envelope protein gene, partial cds 2695 2695 100% 0.0 99% KX216636.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 2695 2695 100% 0.0 99% KX702400.1 Select seq gb|KX266255.1| Zika virus isolate ZIKV_SMGC-1, complete genome 2695 2695 100% 0.0 99% KX266255.1 Select seq gb|KX548902.1| Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KX548902.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 2695 2695 100% 0.0 99% KX377337.1 Select seq gb|KU866423.2| Zika virus isolate Zika virus/SZ01/2016/China polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU866423.2 Select seq gb|KU758874.1| Zika virus isolate 20114 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU758874.1 Select seq gb|KU758868.1| Zika virus isolate 27229 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU758868.1 Select seq gb|KX253996.1| Zika virus isolate ZKC2/2016, complete genome 2695 2695 100% 0.0 99% KX253996.1 Select seq gb|KX185891.1| Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KX185891.1 Select seq gb|KX117076.1| Zika virus isolate Zhejiang04, complete genome 2695 2695 100% 0.0 99% KX117076.1 Select seq gb|KU963796.1| Zika virus isolate SZ-WIV01 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU963796.1 Select seq gb|KU955589.1| Zika virus isolate Z16006 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU955589.1 Select seq gb|KU820898.1| Zika virus isolate GZ01 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU820898.1 Select seq gb|KU740184.2| Zika virus isolate GD01 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU740184.2 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 2695 2695 100% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 2695 2695 100% 0.0 99% KU853012.1 Select seq gb|KU820899.2| Zika virus isolate ZJ03, complete genome 2695 2695 100% 0.0 99% KU820899.2 Select seq gb|KU761564.1| Zika virus isolate GDZ16001 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU761564.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 2695 2695 100% 0.0 99% KU707826.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 2695 2695 100% 0.0 99% KU501215.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU365780.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU365779.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU365777.1 Select seq gb|KU940224.1| Zika virus isolate Bahia09, partial genome 2693 2693 100% 0.0 99% KU940224.1 Select seq gb|KX216633.1| Zika virus isolate VS51-2016 envelope protein gene, partial cds 2691 2691 100% 0.0 99% KX216633.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 2691 2691 100% 0.0 99% KX673530.1 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 2691 2691 100% 0.0 99% KX447517.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 2691 2691 100% 0.0 99% KX601168.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 2691 2691 100% 0.0 99% KX087101.2 Select seq gb|KX056898.1| Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KX056898.1 Select seq gb|KU955590.1| Zika virus isolate Z16019 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU955590.1
niman Posted September 12, 2016 Author Report Posted September 12, 2016 LOCUS KX380263 1512 bp RNA linear VRL 07-SEP-2016 DEFINITION Zika virus isolate FS92-2016 envelope protein gene, partial cds. ACCESSION KX380263 VERSION KX380263.1 GI:1036637438 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 1512) AUTHORS Pyke,A.T. and Moore,P.R. TITLE First isolation of Zika virus in Australia from a clinical patient, imported from Tonga JOURNAL Unpublished REFERENCE 2 (bases 1 to 1512) AUTHORS Pyke,A.T. and Moore,P.R. TITLE Direct Submission JOURNAL Submitted (14-JUN-2016) Public Health Virology, Queensland Health Forensic and Scientific Services, 39 Kessels Road, Coopers Plains, QLD 4108, Australia COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1512 /organism="Zika virus" /mol_type="genomic RNA" /isolate="FS92-2016" /host="Homo sapiens" /db_xref="taxon:64320" /country="Fiji" /collection_date="2016" /note="genotype: Asian" CDS <1..>1512 /codon_start=1 /product="envelope protein" /protein_id="ANK57899.1" /db_xref="GI:1036637439" /translation="IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSA" ORIGIN 1 atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg 61 gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact 121 gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc 181 tatgaggcat caatatcgga catggcttcg gacagccgct gcccaacaca aggtgaagcc 241 taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc 301 tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacctgcgc taagtttgca 361 tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg 421 ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact 481 gatgagaata gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg 541 gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat 601 ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac 661 attccattac cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa 721 gcactggtag agttcaagga cgcacatgcc aaaaggcaga ctgtcgtggt tctagggagt 781 caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca 841 aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg 901 aagggcgtgt catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa 961 acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag 1021 gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc 1081 gctaaccctg taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca 1141 ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg 1201 cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga 1261 atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca 1321 ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg 1381 tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag 1441 aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca 1501 gccgtctctg ct
niman Posted September 12, 2016 Author Report Posted September 12, 2016 Sequences producing significant alignments: Select:AllNone Selected:0 AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments Sequences producing significant alignments: Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession Select seq gb|KX380263.1| Zika virus isolate FS92-2016 envelope protein gene, partial cds 2727 2727 100% 0.0 100% KX380263.1 Select seq gb|KX447521.1| Zika virus isolate 1_0080_PF polyprotein gene, partial cds 2713 2713 100% 0.0 99% KX447521.1 Select seq gb|KX447509.1| Zika virus isolate 1_0087_PF polyprotein gene, complete cds 2713 2713 100% 0.0 99% KX447509.1 Select seq gb|KX216635.1| Zika virus isolate TS17-2016 envelope protein gene, partial cds 2709 2709 100% 0.0 99% KX216635.1 Select seq gb|KX216634.1| Zika virus isolate TS14-2016 envelope protein gene, partial cds 2709 2709 100% 0.0 99% KX216634.1 Select seq gb|KX806557.1| Zika virus isolate TS17-2016, complete genome 2709 2709 100% 0.0 99% KX806557.1 Select seq gb|KJ776791.2| Zika virus strain H/PF/2013, complete genome 2709 2709 100% 0.0 99% KJ776791.2 Select seq gb|KX447520.1| Zika virus isolate 1_0016_PF polyprotein gene, partial cds 2709 2709 100% 0.0 99% KX447520.1 Select seq gb|KX447519.1| Zika virus isolate 1_0199_PF polyprotein gene, partial cds 2709 2709 100% 0.0 99% KX447519.1 Select seq gb|KX447518.1| Zika virus isolate 1_0117_PF polyprotein gene, partial cds 2709 2709 100% 0.0 99% KX447518.1 Select seq gb|KX447516.1| Zika virus isolate 1_0111_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447516.1 Select seq gb|KX447515.1| Zika virus isolate 1_0030_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447515.1 Select seq gb|KX447513.1| Zika virus isolate 1_0134_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447513.1 Select seq gb|KX447510.1| Zika virus isolate 1_0049_PF polyprotein gene, complete cds 2709 2709 100% 0.0 99% KX447510.1 Select seq dbj|LC171327.1| Zika virus gene for polyprotein, partial cds, strain: ZIKV/Hu/Chiba/S36/2016 2709 2709 100% 0.0 99% LC171327.1 Select seq gb|KX576684.1| Zika virus vector pZIKV-ICD, complete sequence 2709 2709 100% 0.0 99% KX576684.1 Select seq gb|KX369547.1| Zika virus strain PF13/251013-18, complete genome 2709 2709 100% 0.0 99% KX369547.1 Select seq gb|KX280026.1| Zika virus isolate Paraiba_01, complete genome 2709 2709 100% 0.0 99% KX280026.1 Select seq gb|KX262887.1| Zika virus isolate 103451, complete genome 2709 2709 100% 0.0 99% KX262887.1 Select seq gb|KX216638.1| Zika virus isolate ESS23-2015 envelope protein gene, partial cds 2704 2704 100% 0.0 99% KX216638.1 Select seq gb|KX216637.1| Zika virus isolate GS29-2016 envelope protein gene, partial cds 2704 2704 100% 0.0 99% KX216637.1 Select seq gb|KX216632.1| Zika virus isolate SIS58-2015 envelope protein gene, partial cds 2704 2704 100% 0.0 99% KX216632.1 Select seq gb|KX694534.1| Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome 2704 2704 100% 0.0 99% KX694534.1 Select seq gb|KX447517.1| Zika virus isolate 1_0038_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447517.1 Select seq gb|KX447514.1| Zika virus isolate 1_0035_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447514.1 Select seq gb|KX447511.1| Zika virus isolate 1_0015_PF polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX447511.1 Select seq gb|KX446951.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome 2704 2704 100% 0.0 99% KX446951.1 Select seq gb|KX247632.1| Zika virus isolate MEX_I_7 polyprotein gene, complete cds 2704 2704 100% 0.0 99% KX247632.1 Select seq gb|KX051563.1| Zika virus isolate Haiti/1/2016, complete genome 2704 2704 100% 0.0 99% KX051563.1 Select seq gb|KU509998.3| Zika virus strain Haiti/1225/2014, complete genome 2704 2704 100% 0.0 99% KU509998.3 Select seq gb|KU991811.1| Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds 2704 2704 100% 0.0 99% KU991811.1 Select seq gb|KU646828.1| Zika virus isolate Si322 polyprotein gene, partial cds 2704 2704 100% 0.0 99% KU646828.1 Select seq gb|KX216640.1| Zika virus isolate CKS63-2014 envelope protein gene, partial cds 2700 2700 100% 0.0 99% KX216640.1 Select seq gb|KX216636.1| Zika virus isolate SS27-2016 envelope protein gene, partial cds 2700 2700 100% 0.0 99% KX216636.1 Select seq gb|KX197205.1| Zika virus isolate 9, complete genome 2700 2700 100% 0.0 99% KX197205.1 Select seq gb|KX447512.1| Zika virus isolate 1_0181_PF polyprotein gene, complete cds 2700 2700 100% 0.0 99% KX447512.1 Select seq gb|KX266255.1| Zika virus isolate ZIKV_SMGC-1, complete genome 2700 2700 100% 0.0 99% KX266255.1 Select seq gb|KX446950.1| Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome 2700 2700 100% 0.0 99% KX446950.1 Select seq gb|KU866423.2| Zika virus isolate Zika virus/SZ01/2016/China polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU866423.2 Select seq gb|KU758871.1| Zika virus isolate 17170 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU758871.1 Select seq gb|KU758870.1| Zika virus isolate 17160 polyprotein gene, partial cds 2700 2700 100% 0.0 99% KU758870.1 Select seq gb|KX253996.1| Zika virus isolate ZKC2/2016, complete genome 2700 2700 100% 0.0 99% KX253996.1 Select seq gb|KX247646.1| Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome 2700 2700 100% 0.0 99% KX247646.1 Select seq gb|KX198135.1| Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome 2700 2700 100% 0.0 99% KX198135.1 Select seq gb|KX197192.1| Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome 2700 2700 100% 0.0 99% KX197192.1 Select seq gb|KX185891.1| Zika virus isolate Zika virus/CN/SZ02/2016 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KX185891.1 Select seq gb|KX156776.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome 2700 2700 100% 0.0 99% KX156776.1 Select seq gb|KX156775.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome 2700 2700 100% 0.0 99% KX156775.1 Select seq gb|KX156774.1| Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome 2700 2700 100% 0.0 99% KX156774.1 Select seq gb|KX117076.1| Zika virus isolate Zhejiang04, complete genome 2700 2700 100% 0.0 99% KX117076.1 Select seq gb|KU963796.1| Zika virus isolate SZ-WIV01 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU963796.1 Select seq gb|KU955589.1| Zika virus isolate Z16006 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU955589.1 Select seq gb|KU870645.1| Zika virus isolate FB-GWUH-2016, complete genome 2700 2700 100% 0.0 99% KU870645.1 Select seq gb|KU922960.1| Zika virus isolate MEX/InDRE/Sm/2016, complete genome 2700 2700 100% 0.0 99% KU922960.1 Select seq gb|KU922923.1| Zika virus isolate MEX/InDRE/Lm/2016, complete genome 2700 2700 100% 0.0 99% KU922923.1 Select seq gb|KU820899.2| Zika virus isolate ZJ03, complete genome 2700 2700 100% 0.0 99% KU820899.2 Select seq gb|KU729218.1| Zika virus isolate BeH828305 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU729218.1 Select seq gb|KU527068.1| Zika virus strain Natal RGN, complete genome 2700 2700 100% 0.0 99% KU527068.1 Select seq gb|KU647676.1| Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds 2700 2700 100% 0.0 99% KU647676.1 Select seq gb|KU321639.1| Zika virus strain ZikaSPH2015, complete genome 2700 2700 100% 0.0 99% KU321639.1 Select seq gb|KX766028.1| Zika virus isolate R114916, complete genome 2697 2697 100% 0.0 99% KX766028.1 Select seq gb|KX380262.1| Zika virus isolate MS10-2016 envelope protein gene, partial cds 2695 2695 100% 0.0 99% KX380262.1 Select seq gb|KX216633.1| Zika virus isolate VS51-2016 envelope protein gene, partial cds 2695 2695 100% 0.0 99% KX216633.1 Select seq gb|KU820897.5| Zika virus isolate FLR polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU820897.5 Select seq gb|KX766029.1| Zika virus isolate R116265, complete genome 2695 2695 100% 0.0 99% KX766029.1 Select seq gb|KX520666.1| Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KX520666.1 Select seq gb|KU758877.1| Zika virus isolate 17271 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU758877.1 Select seq gb|KU758873.1| Zika virus isolate 18246 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU758873.1 Select seq gb|KU758869.1| Zika virus isolate 05211 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU758869.1 Select seq gb|KU937936.1| Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU937936.1 Select seq gb|KX087102.1| Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome 2695 2695 100% 0.0 99% KX087102.1 Select seq gb|KU940228.1| Zika virus isolate Bahia07, partial genome 2695 2695 100% 0.0 99% KU940228.1 Select seq gb|KU926309.1| Zika virus isolate Rio-U1, complete genome 2695 2695 100% 0.0 99% KU926309.1 Select seq gb|KU497555.1| Zika virus isolate Brazil-ZKV2015, complete genome 2695 2695 100% 0.0 99% KU497555.1 Select seq gb|KU501217.1| Zika virus strain 8375 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU501217.1 Select seq gb|KU501216.1| Zika virus strain 103344 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU501216.1 Select seq gb|KU365778.1| Zika virus strain BeH819015 polyprotein gene, complete cds 2695 2695 100% 0.0 99% KU365778.1 Select seq gb|KU312315.1| Zika virus isolate Z1106027 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU312315.1 Select seq gb|KU312314.1| Zika virus isolate Z1106031 polyprotein gene, partial cds 2695 2695 100% 0.0 99% KU312314.1 Select seq gb|KJ634273.1| Zika virus strain CK-ISL 2014 E protein (E) gene, partial cds 2695 2695 100% 0.0 99% KJ634273.1 Select seq gb|KX702400.1| Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome 2691 2691 100% 0.0 99% KX702400.1 Select seq gb|KX548902.1| Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KX548902.1 Select seq gb|KX377337.1| Zika virus strain PRVABC-59, complete genome 2691 2691 100% 0.0 99% KX377337.1 Select seq gb|KU758874.1| Zika virus isolate 20114 polyprotein gene, partial cds 2691 2691 100% 0.0 99% KU758874.1 Select seq gb|KU758868.1| Zika virus isolate 27229 polyprotein gene, partial cds 2691 2691 100% 0.0 99% KU758868.1 Select seq gb|KU820898.1| Zika virus isolate GZ01 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU820898.1 Select seq gb|KU740184.2| Zika virus isolate GD01 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU740184.2 Select seq gb|KU853013.1| Zika virus isolate Dominican Republic/2016/PD2, complete genome 2691 2691 100% 0.0 99% KU853013.1 Select seq gb|KU853012.1| Zika virus isolate Dominican Republic/2016/PD1, complete genome 2691 2691 100% 0.0 99% KU853012.1 Select seq gb|KU761564.1| Zika virus isolate GDZ16001 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU761564.1 Select seq gb|KU707826.1| Zika virus isolate SSABR1, complete genome 2691 2691 100% 0.0 99% KU707826.1 Select seq gb|KU646827.1| Zika virus isolate Si323 polyprotein gene, partial cds 2691 2691 100% 0.0 99% KU646827.1 Select seq gb|KU501215.1| Zika virus strain PRVABC59, complete genome 2691 2691 100% 0.0 99% KU501215.1 Select seq gb|KU365780.1| Zika virus strain BeH815744 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU365780.1 Select seq gb|KU365779.1| Zika virus strain BeH819966 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU365779.1 Select seq gb|KU365777.1| Zika virus strain BeH818995 polyprotein gene, complete cds 2691 2691 100% 0.0 99% KU365777.1 Select seq gb|KX673530.1| Zika virus isolate PHE_semen_Guadeloupe, complete genome 2686 2686 100% 0.0 99% KX673530.1 Select seq gb|KX601168.1| Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome 2686 2686 100% 0.0 99% KX601168.1 Select seq gb|KX087101.2| Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome 2686 2686 100% 0.0 99% KX087101.2 Select seq gb|KX056898.1| Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds 2686 2686 100% 0.0 99% KX056898.1
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