niman Posted November 24, 2016 Report Posted November 24, 2016 Croatian Veterinary Institute has released two H5N8 sets of sequences (at GISAID) from mute swans which match Uvs Lake sequences.
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Isolate name: A/mute swan/Croatia/70/2016 Isolate ID: EPI_ISL_238196 Passage details/history: 0 Type: A / H5N8 Lineage: Sample information Collection date: 2016-10-31 Host Cygnus olor Additional host information: Domestic status: Wild Is vaccinated: Location: Croatia / Vukovarsko-Srijemska Zupanija Additional location information: Cerna, river Bid Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Croatian Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence HA A/mute swan/Croatia/70/2016 1729 EPI861568 NA A/mute swan/Croatia/70/2016 1425 EPI861569 MP A/mute swan/Croatia/70/2016 983 EPI861570 NS A/mute swan/Croatia/70/2016 838 EPI861571 Submitter information Submitter: Savić, Vladimir Submission Date: 2016-11-24 Last modifier: Savić, Vladimir Last modified: 2016-11-24 Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Align Segment-ID Name Score E-Value Identity EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1696/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1666/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1664/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1599/1609 (99%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1651/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2826.5 0.000000e+00 1646/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2787.7 0.000000e+00 1640/1705 (96%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2761.9 0.000000e+00 1634/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2748.9 0.000000e+00 1633/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2743.4 0.000000e+00 1631/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2737.9 0.000000e+00 1631/1705 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2728.6 0.000000e+00 1629/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2717.5 0.000000e+00 1628/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2715.7 0.000000e+00 1626/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2713.8 0.000000e+00 1627/1705 (95%) EPI775291 A/duck/Guangzhou/021/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI775283 A/duck/Guangzhou/018/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI687547 A/Goose/ Guangdong /SSZYP/2015（H5N6） (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%)
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2508.9 0.000000e+00 1390/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2475.6 0.000000e+00 1384/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2464.6 0.000000e+00 1382/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2442.4 0.000000e+00 1378/1406 (98%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1375/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2396.2 0.000000e+00 1351/1378 (98%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2359.3 0.000000e+00 1358/1398 (97%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1360/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI548487 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI544759 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI624533 A/scarlet_ibis/Germany/AR44-L01279/2015 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585631 A/baikal teal/Korea/2414/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585621 A/baikal teal/Korea/1449/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%)
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Align Segment-ID Name Score E-Value Identity EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1807.1 0.000000e+00 978/978 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1785.0 0.000000e+00 974/978 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 973/977 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1768.4 0.000000e+00 971/978 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1768.4 0.000000e+00 971/978 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 970/978 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 970/978 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 969/978 (99%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1713.0 0.000000e+00 961/978 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1707.4 0.000000e+00 960/978 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1707.4 0.000000e+00 960/978 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1707.4 0.000000e+00 960/978 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1707.4 0.000000e+00 960/978 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1701.9 0.000000e+00 959/978 (98%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1696.3 0.000000e+00 959/979 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1690.8 0.000000e+00 957/978 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1690.8 0.000000e+00 957/978 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1690.8 0.000000e+00 957/978 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1690.8 0.000000e+00 957/978 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 956/978 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1685.3 0.000000e+00 956/978 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1685.3 0.000000e+00 956/978 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1685.3 0.000000e+00 956/978 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1685.3 0.000000e+00 956/978 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1679.7 0.000000e+00 955/978 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1674.2 0.000000e+00 954/978 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1674.2 0.000000e+00 955/979 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1674.2 0.000000e+00 954/978 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1674.2 0.000000e+00 954/978 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1668.6 0.000000e+00 953/978 (97%) EPI514272 A/mallard/Sweden/52334/2006 (A/H4N6) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1668.6 0.000000e+00 954/979 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1663.1 0.000000e+00 952/978 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1663.1 0.000000e+00 952/978 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1663.1 0.000000e+00 952/978 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1663.1 0.000000e+00 952/978 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI618959 A/mallard/Sweden/1417/2002 (A/H10N7) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI296609 A/mallard/Sweden/90/2005 (A/H11N9) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI190357 A/gadwall/Netherlands/1/2006 (A/H9N2) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1663.1 0.000000e+00 953/979 (97%) EPI619147 A/mallard/Sweden/50055/2006 (A/H8N4) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%) EPI619097 A/mallard/Sweden/68537/2007 (A/H0) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%) EPI618547 A/mallard/Sweden/58705/2006 (A/H5N2) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%) EPI618488 A/mallard/Sweden/101589/2009 (A/H11N9) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%) EPI559668 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%) EPI544354 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1657.6 0.000000e+00 952/979 (97%)
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1530.1 0.000000e+00 838/838 (100%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 827/835 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 829/838 (98%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 829/838 (98%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 829/838 (98%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 829/838 (98%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1508.0 0.000000e+00 829/838 (98%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1502.4 0.000000e+00 828/838 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1491.4 0.000000e+00 826/838 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 823/837 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1465.5 0.000000e+00 821/837 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 821/837 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 821/837 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 820/837 (97%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1458.1 0.000000e+00 821/839 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 818/837 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1448.9 0.000000e+00 818/837 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 818/838 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 817/837 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 817/837 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 817/837 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 818/838 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1441.5 0.000000e+00 818/839 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 816/837 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 816/837 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 816/837 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 815/837 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1432.3 0.000000e+00 815/837 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 811/837 (96%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 810/837 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 810/837 (96%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1402.7 0.000000e+00 811/839 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1402.7 0.000000e+00 811/839 (96%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1388.0 0.000000e+00 807/837 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1388.0 0.000000e+00 807/837 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1388.0 0.000000e+00 807/837 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1388.0 0.000000e+00 807/837 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1382.4 0.000000e+00 806/837 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1380.6 0.000000e+00 807/839 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1376.9 0.000000e+00 805/837 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1376.9 0.000000e+00 805/837 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1376.9 0.000000e+00 805/837 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1376.9 0.000000e+00 805/837 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1376.9 0.000000e+00 805/837 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 804/836 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1371.3 0.000000e+00 804/837 (96%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1365.8 0.000000e+00 804/838 (95%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1365.8 0.000000e+00 804/838 (95%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1365.8 0.000000e+00 803/837 (95%) EPI692476 A/duck/Henan/S4179/2009 (A/H4N6) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI527757 A/mallard/San Jiang/275/2007 (A/H6N1) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI471877 A/duck/Guangxi/GXd-6/2010 (A/H6N8) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470648 A/duck/Jiangxi/3292/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470642 A/duck/Jiangxi/3257/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470641 A/duck/Jiangxi/3152/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470635 A/duck/Jiangxi/3283/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470604 A/duck/Jiangxi/3286/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470603 A/duck/Jiangxi/3230/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470602 A/duck/Jiangxi/3214/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470601 A/duck/Jiangxi/3190/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470600 A/duck/Jiangxi/3169/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470599 A/duck/Jiangxi/3141/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI470598 A/duck/Jiangxi/3096/2009 (A/H7N9) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%) EPI419951 A/mallard/California/2559P/2011 (A/H5N8) segment 8 (NS) 1360.3 0.000000e+00 802/837 (95%)
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Isolate name: A/mute swan/Croatia/78/2016 Isolate ID: EPI_ISL_238197 Passage details/history: 0 Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-12 Host Cygnus cygnus Additional host information: Domestic status: Wild Is vaccinated: Location: Croatia / Osjecko-Baranjska Zupanija Additional location information: Bijelo Brdo Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Croatian Veterinary Institute Sample ID given by the submitting laboratory: Authors: Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence HA A/mute swan/Croatia/78/2016 1742 EPI861572 NA A/mute swan/Croatia/78/2016 1425 EPI861573 Submitter information Submitter: Savić, Vladimir Submission Date: 2016-11-24 Last modifier: Savić, Vladimir Last modified: 2016-11-24 Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Align Segment-ID Name Score E-Value Identity EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1695/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2953.9 0.000000e+00 1669/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1665/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1663/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1598/1609 (99%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2905.9 0.000000e+00 1659/1702 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1659/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1657/1705 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1653/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1650/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2817.3 0.000000e+00 1637/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2787.7 0.000000e+00 1639/1704 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2782.2 0.000000e+00 1639/1705 (96%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2760.0 0.000000e+00 1637/1707 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2756.3 0.000000e+00 1633/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2743.4 0.000000e+00 1632/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2737.9 0.000000e+00 1630/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2723.1 0.000000e+00 1628/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2712.0 0.000000e+00 1627/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1627/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2710.2 0.000000e+00 1625/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1627/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1627/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1627/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2710.2 0.000000e+00 1626/1705 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2708.3 0.000000e+00 1626/1705 (95%) EPI775291 A/duck/Guangzhou/021/2014 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI775283 A/duck/Guangzhou/018/2014 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI687547 A/Goose/ Guangdong /SSZYP/2015（H5N6） (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1625/1705 (95%)
niman Posted November 24, 2016 Author Report Posted November 24, 2016 Align Segment-ID Name Score E-Value Identity EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2497.8 0.000000e+00 1388/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2464.6 0.000000e+00 1382/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2453.5 0.000000e+00 1380/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1370/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2385.1 0.000000e+00 1349/1378 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1367/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1366/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1366/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1365/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2348.2 0.000000e+00 1356/1398 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1351/1395 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1358/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2315.0 0.000000e+00 1355/1406 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI548487 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1355/1407 (96%) EPI544759 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA) 2309.4 0.000000e+00 1354/1406 (96%) EPI624533 A/scarlet_ibis/Germany/AR44-L01279/2015 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1353/1406 (96%) EPI585631 A/baikal teal/Korea/2414/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1353/1406 (96%) EPI585621 A/baikal teal/Korea/1449/2014 (A/H5N8) segment 6 (NA) 2303.9 0.000000e+00 1353/1406 (96%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1696/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1666/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1664/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1599/1609 (99%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1651/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2826.5 0.000000e+00 1646/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2787.7 0.000000e+00 1640/1705 (96%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2761.9 0.000000e+00 1634/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2748.9 0.000000e+00 1633/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2743.4 0.000000e+00 1631/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2737.9 0.000000e+00 1631/1705 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1630/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2728.6 0.000000e+00 1629/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1629/1705 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1628/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2717.5 0.000000e+00 1628/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2715.7 0.000000e+00 1626/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1628/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2713.8 0.000000e+00 1627/1705 (95%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2508.9 0.000000e+00 1390/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2475.6 0.000000e+00 1384/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2464.6 0.000000e+00 1382/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2442.4 0.000000e+00 1378/1406 (98%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1375/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2396.2 0.000000e+00 1351/1378 (98%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1369/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2359.3 0.000000e+00 1358/1398 (97%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1360/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1357/1406 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1356/1406 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2320.5 0.000000e+00 1357/1407 (96%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 971/971 (100%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 965/971 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 964/971 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 964/971 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1705.6 0.000000e+00 955/971 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1683.4 0.000000e+00 952/972 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1677.9 0.000000e+00 950/971 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1674.2 0.000000e+00 949/971 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1661.3 0.000000e+00 948/972 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1655.7 0.000000e+00 946/971 (97%) EPI514272 A/mallard/Sweden/52334/2006 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1655.7 0.000000e+00 947/972 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1650.2 0.000000e+00 945/971 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI618959 A/mallard/Sweden/1417/2002 (A/H10N7) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI296609 A/mallard/Sweden/90/2005 (A/H11N9) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI190357 A/gadwall/Netherlands/1/2006 (A/H9N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1650.2 0.000000e+00 946/972 (97%) EPI231180 A/spot-billed duck/Korea/537/2008 (A/H6N1) segment 7 (MP) 1648.3 0.000000e+00 945/971 (97%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 812/812 (100%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 806/812 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 804/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 803/812 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 803/812 (98%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 802/812 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 800/812 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 799/813 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 797/813 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 796/813 (97%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 795/813 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 794/813 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1404.6 0.000000e+00 794/813 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 794/814 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 793/813 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 794/814 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 792/813 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1388.0 0.000000e+00 791/813 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1388.0 0.000000e+00 791/813 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1365.8 0.000000e+00 787/813 (96%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1360.3 0.000000e+00 786/813 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1360.3 0.000000e+00 786/813 (96%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1354.7 0.000000e+00 785/813 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1354.7 0.000000e+00 785/813 (96%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1343.6 0.000000e+00 783/813 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1338.1 0.000000e+00 782/813 (96%) EPI262750 A/aquatic bird/Korea/w209/2007 (A/H5N3) segment 8 (NS) 1336.2 0.000000e+00 781/812 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI314207 A/wild duck/Taiwan/WB1364/2007 (A/H4N6) segment 8 (NS) 1332.6 0.000000e+00 781/813 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1327.0 0.000000e+00 780/813 (95%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1321.5 0.000000e+00 780/814 (95%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1321.5 0.000000e+00 780/814 (95%) EPI389736 A/duck/Eastern China/318/2003 (A/H11) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI296191 A/wild duck/Korea/YS44/2004 (A/H1N2) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256790 A/muscovy duck/Thailand/CU-LM4761/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256782 A/muscovy duck/Thailand/CU-LM4759/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI256774 A/muscovy duck/Thailand/CU-LM4754/2009 (A/H10N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI182408 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI170823 A/duck/Primorie/2633/01 (A/H5N3) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%) EPI127084 A/aquatic bird/Korea/CN-1/2004 (A/H3N6) segment 8 (NS) 1321.5 0.000000e+00 779/813 (95%)
Recommended Posts
Please sign in to comment
You will be able to leave a comment after signing in
Sign In Now