niman Posted November 30, 2016 Report Posted November 30, 2016 National Veterinary Institute has released (at GISAID) full H5N8 sequences from chicken farm in Morap. Sweden.
niman Posted November 30, 2016 Author Report Posted November 30, 2016 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 EPI_ISL_238896 H5N8 Clinical Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 EPI_ISL_238895 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 EPI_ISL_238894 H5N8 Clinocal Sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 EPI_ISL_238893 H5N8 Clinical sample 2280 2297 2190 1704 1463 1413 982 835 --- --- 2016-11-21
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Isolate detail Isolate name:  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016   Isolate ID:  EPI_ISL_238896   Passage details/history:  Clinical Sample   Type:  A / H5N8   Lineage:   Sample information  Collection date:  2016-11-21   Host  Gallus gallus   Additional host information:  http://www.oie.int/wahis_2/public/wahid.php/Reviewreport/Review?page_refer=MapFullEventReport&reportid=21663   Domestic status:  Domestic   Is vaccinated:  N   Location:  Sweden / Skane Lan / Helsingborgs Kommun   Additional location information:  City of Mörarp, Lat. 56.053495 Long. 12.848939   Health status:  Sick   Specimen source:  Organ   Strain or commercial product name used for vaccination:     Institute information  Originating lab:  National Veterinary Institute  Sample ID given by the sample provider:     Address:  National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden  Submitting lab:  National Veterinary Institute  Sample ID given by the submitting laboratory:     Authors:    Address:  National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden  Publication Publication  In vivo antiviral resistance  Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures  Adamantanes:  Unknown   Oseltamivir:  Unknown   Zanamivir:  Unknown   Peramivir:  Unknown   Other:  Unknown                                                         Additional information Antigenic characterization:     Note:     Sequence  segment identifier length accession # INSDC Sequence  PB2  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  2280  EPI863854      PB1  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  2297  EPI863855      PA  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  2190  EPI863856      HA  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  1704  EPI863857      NP  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  1463  EPI863858      NA  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  1413  EPI863859      MP  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  982  EPI863860      NS  A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016  835  EPI863861     Submitter information  Submitter:  Zohari, Siamak    Submission Date:  2016-11-29   Last modifier:  Zohari, Siamak    Last modified:  2016-11-29   Address:  National Veterinary Institute Ulls v 2B S-75189 75 189 Uppsala Sweden
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1687/1705 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1602/1609 (99%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2898.5 0.000000e+00 1659/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1656/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2867.1 0.000000e+00 1652/1702 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2859.7 0.000000e+00 1652/1704 (96%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1652/1705 (96%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1650/1705 (96%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2821.0 0.000000e+00 1643/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2815.4 0.000000e+00 1644/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2804.3 0.000000e+00 1642/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2793.3 0.000000e+00 1640/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2789.6 0.000000e+00 1632/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2787.7 0.000000e+00 1639/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2776.6 0.000000e+00 1637/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2765.6 0.000000e+00 1635/1704 (95%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2760.0 0.000000e+00 1634/1704 (95%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2754.5 0.000000e+00 1634/1705 (95%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2732.3 0.000000e+00 1631/1706 (95%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2728.6 0.000000e+00 1628/1704 (95%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2715.7 0.000000e+00 1627/1705 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2710.2 0.000000e+00 1625/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2704.6 0.000000e+00 1626/1706 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2704.6 0.000000e+00 1626/1706 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2699.1 0.000000e+00 1624/1705 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2695.4 0.000000e+00 1623/1705 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2693.5 0.000000e+00 1623/1705 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1623/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2688.0 0.000000e+00 1622/1705 (95%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2684.3 0.000000e+00 1622/1705 (95%) EPI681285 A/duck/Zhejiang/727158/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2682.5 0.000000e+00 1620/1704 (95%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1622/1706 (95%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2682.5 0.000000e+00 1621/1705 (95%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1406/1406 (100%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2593.8 0.000000e+00 1405/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2588.3 0.000000e+00 1404/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2562.4 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1395/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1392/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2483.0 0.000000e+00 1386/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2455.3 0.000000e+00 1381/1407 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2449.8 0.000000e+00 1380/1407 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2427.6 0.000000e+00 1376/1407 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2405.5 0.000000e+00 1372/1407 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2399.9 0.000000e+00 1371/1407 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1371/1408 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2394.4 0.000000e+00 1370/1407 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1369/1407 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1369/1407 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1370/1408 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2383.3 0.000000e+00 1368/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1367/1407 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2377.8 0.000000e+00 1368/1408 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2372.2 0.000000e+00 1366/1407 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2372.2 0.000000e+00 1367/1408 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2370.4 0.000000e+00 1347/1379 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2366.7 0.000000e+00 1365/1407 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1365/1408 (96%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1364/1407 (96%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2361.1 0.000000e+00 1364/1407 (96%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2355.6 0.000000e+00 1363/1407 (96%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2333.4 0.000000e+00 1354/1399 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2316.8 0.000000e+00 1356/1407 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2316.8 0.000000e+00 1349/1396 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1356/1408 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2311.3 0.000000e+00 1355/1407 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI552748 A/turkey/Germany/AR2485-86-L00899/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI548487 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1355/1408 (96%) EPI544759 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA) 2305.7 0.000000e+00 1354/1407 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2300.2 0.000000e+00 1353/1407 (96%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1810.8 0.000000e+00 981/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1779.4 0.000000e+00 973/978 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1703.7 0.000000e+00 963/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1689.0 0.000000e+00 960/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1676.0 0.000000e+00 959/984 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1676.0 0.000000e+00 958/983 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1674.2 0.000000e+00 956/981 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI693701 A/duck/Mongolia/20/2015 (A/H3N8) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1670.5 0.000000e+00 957/983 (97%) EPI685607 A/duck/Vietnam/HU1-151/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647783 A/duck/Vietnam/HU1-148/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647782 A/duck/Vietnam/HU1-16/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI647780 A/muscovy duck/Vietnam/HU1-399/2014 (A/H11N7) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1665.0 0.000000e+00 957/984 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1663.1 0.000000e+00 955/982 (97%) EPI619097 A/mallard/Sweden/68537/2007 (A/H0) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI618547 A/mallard/Sweden/58705/2006 (A/H5N2) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI618488 A/mallard/Sweden/101589/2009 (A/H11N9) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI559668 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%) EPI544354 A/harbour seal/Germany/1/2014 (A/H10N7) segment 7 (MP) 1659.4 0.000000e+00 955/983 (97%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4207.8 0.000000e+00 2279/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4165.3 0.000000e+00 2271/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3947.4 0.000000e+00 2232/2280 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3897.6 0.000000e+00 2223/2280 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3880.9 0.000000e+00 2220/2280 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3875.4 0.000000e+00 2219/2280 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3847.7 0.000000e+00 2214/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3847.7 0.000000e+00 2215/2281 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3842.2 0.000000e+00 2214/2281 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3820.0 0.000000e+00 2210/2281 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3820.0 0.000000e+00 2210/2281 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3814.5 0.000000e+00 2208/2280 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3808.9 0.000000e+00 2207/2280 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3808.9 0.000000e+00 2207/2280 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3808.9 0.000000e+00 2208/2281 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3797.8 0.000000e+00 2207/2282 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3792.3 0.000000e+00 2205/2281 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3786.8 0.000000e+00 2204/2281 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3781.2 0.000000e+00 2202/2280 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3781.2 0.000000e+00 2203/2281 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3775.7 0.000000e+00 2201/2280 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3775.7 0.000000e+00 2203/2282 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3775.7 0.000000e+00 2202/2281 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3775.7 0.000000e+00 2203/2282 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3770.1 0.000000e+00 2201/2281 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3764.6 0.000000e+00 2200/2281 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2199/2282 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3753.5 0.000000e+00 2198/2281 (96%) EPI600967 A/duck/Jiangxi/24570/2009 (A/H0) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI469175 A/northern shoveler/Hong Kong/MPL133/2010 (A/H2N9) segment 1 (PB2) 3748.0 0.000000e+00 2197/2281 (96%) EPI222084 A/garganey/Altai/1213/2007 (A/H5N2) segment 1 (PB2) 3748.0 0.000000e+00 2198/2282 (96%) EPI527537 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 1 (PB2) 3742.4 0.000000e+00 2196/2281 (96%) EPI469224 A/duck/Jiangxi/16309/2010 (A/H7N7) segment 1 (PB2) 3742.4 0.000000e+00 2196/2281 (96%) EPI540412 A/environment/Bangladesh/1008/2010 (A/H7N9) segment 1 (PB2) 3731.4 0.000000e+00 2194/2281 (96%) EPI671741 A/lesser white-fronted goose/HuNan/412-3Y/2010 (A/H7N7) segment 1 (PB2) 3725.8 0.000000e+00 2198/2286 (96%) EPI649170 A/duck/Zhejiang/925170/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649169 A/duck/Zhejiang/925168/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649168 A/duck/Zhejiang/925166/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI649167 A/duck/Zhejiang/925161/2014 (A/H4N2) segment 1 (PB2) 3725.8 0.000000e+00 2193/2281 (96%) EPI469173 A/northern shoveler/Hong Kong/MPL961/2011 (A/H2N9) segment 1 (PB2) 3720.3 0.000000e+00 2192/2281 (96%) EPI540260 A/duck/Bangladesh/1584/2010 (A/H1N3) segment 1 (PB2) 3703.7 0.000000e+00 2189/2281 (95%) EPI513573 A/mallard/Sweden/80348/2008 (A/H0) segment 1 (PB2) 3703.7 0.000000e+00 2190/2282 (95%) EPI760218 A/duck/Hunan/7/2015 (A/H3N6) segment 1 (PB2) 3698.1 0.000000e+00 2187/2280 (95%) EPI584405 A/duck/Hunan/S4280/2009 (A/H10N8) segment 1 (PB2) 3698.1 0.000000e+00 2189/2282 (95%) EPI540196 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 1 (PB2) 3698.1 0.000000e+00 2188/2281 (95%) EPI540236 A/duck/Bangladesh/1352/2009 (A/H1N1) segment 1 (PB2) 3692.6 0.000000e+00 2188/2282 (95%) EPI372328 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 1 (PB2) 3688.9 0.000000e+00 2187/2282 (95%) EPI527558 A/velvet scoter/Mongolia/986V/2009 (A/H7N3) segment 1 (PB2) 3687.0 0.000000e+00 2187/2282 (95%) EPI513241 A/mallard/Sweden/104925/2009 (A/H4N6) segment 1 (PB2) 3687.0 0.000000e+00 2187/2282 (95%) EPI692605 A/goose/Jiangsu/S2433/2011 (A/H4N6) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI401294 A/wild duck/Korea/CSM4-28/2010 (A/H4N6) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI354433 A/chicken/Pakistan/NARC-16945/2010 (A/H3N1) segment 1 (PB2) 3681.5 0.000000e+00 2185/2281 (95%) EPI221960 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI221952 A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3681.5 0.000000e+00 2186/2282 (95%) EPI823912 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2124/2191 (96%) EPI692525 A/duck/Jiangsu/S2447/2011 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540388 A/duck/Bangladesh/1559/2009 (A/H5N2) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540300 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 1 (PB2) 3676.0 0.000000e+00 2184/2281 (95%) EPI527577 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 1 (PB2) 3676.0 0.000000e+00 2148/2227 (96%) EPI401308 A/duck/Korea/DY104/2007 (A/H4N6) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI383926 A/duck/Thailand/CU-7518C/2010 (A/H3N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI221976 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI221968 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3676.0 0.000000e+00 2185/2282 (95%) EPI540292 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI540252 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI513596 A/mallard/Sweden/81019/2008 (A/H4N6) segment 1 (PB2) 3670.4 0.000000e+00 2183/2281 (95%) EPI384026 A/duck/Thailand/CU-7519C/2010 (A/H3N8) segment 1 (PB2) 3670.4 0.000000e+00 2184/2282 (95%) EPI540527 A/duck/Bangladesh/727/2011 (A/H2N4) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI527547 A/ruddy shelduck/Mongolia/598C2/2009 (A/H7N3) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI461808 A/environment/Hunan/S4350/2011 (A/H3N8) segment 1 (PB2) 3664.9 0.000000e+00 2183/2282 (95%) EPI387519 A/snow goose/Mongolia/1-29/2008 (A/H3N8) segment 1 (PB2) 3663.0 0.000000e+00 2181/2280 (95%) EPI387520 A/snow goose/Mongolia/1-44/2008 (A/H3N8) segment 1 (PB2) 3661.2 0.000000e+00 2180/2279 (95%) EPI514962 A/mallard/Sweden/79391/2008 (A/H4N2) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513902 A/mallard/Sweden/79308/2008 (A/H4N2) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513895 A/mallard/Sweden/79230/2008 (A/H0) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513865 A/mallard/Sweden/79367/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513851 A/mallard/Sweden/79332/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513828 A/mallard/Sweden/79328/2008 (A/H4N6) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%) EPI513826 A/mallard/Sweden/79956/2008 (A/H0) segment 1 (PB2) 3659.3 0.000000e+00 2182/2282 (95%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4189.3 0.000000e+00 2271/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4189.3 0.000000e+00 2271/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4185.6 0.000000e+00 2270/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4180.1 0.000000e+00 2270/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4163.5 0.000000e+00 2267/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2246/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3903.1 0.000000e+00 2220/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3875.4 0.000000e+00 2216/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3869.9 0.000000e+00 2214/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3864.3 0.000000e+00 2214/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3864.3 0.000000e+00 2213/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3864.3 0.000000e+00 2213/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3858.8 0.000000e+00 2212/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3858.8 0.000000e+00 2212/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3853.2 0.000000e+00 2211/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3842.2 0.000000e+00 2207/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3842.2 0.000000e+00 2209/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3836.6 0.000000e+00 2209/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3836.6 0.000000e+00 2208/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3818.1 0.000000e+00 2193/2257 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3814.5 0.000000e+00 2205/2275 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3808.9 0.000000e+00 2204/2275 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3808.9 0.000000e+00 2203/2274 (96%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI617772 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI527629 A/common shelduck/Mongolia/2106/2011 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2202/2274 (96%) EPI602453 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602446 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602432 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602425 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602408 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602401 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602387 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602373 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602348 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602341 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602334 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI602327 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599878 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599871 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599857 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599850 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599843 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599829 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI599836 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 2 (PB1) 3794.1 0.000000e+00 2201/2275 (96%) EPI602439 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI602394 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI372392 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 2 (PB1) 3792.3 0.000000e+00 2200/2274 (96%) EPI372353 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 2 (PB1) 3792.3 0.000000e+00 2201/2275 (96%) EPI599864 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 2 (PB1) 3786.8 0.000000e+00 2201/2276 (96%) EPI372400 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 2 (PB1) 3781.2 0.000000e+00 2198/2274 (96%) EPI515123 A/duck/Vietnam/LBM533/2013 (A/H3N6) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI372479 A/teal/Egypt/12908-NAMRU3/2005 (A/H10N1) segment 2 (PB1) 3775.7 0.000000e+00 2199/2276 (96%) EPI704281 A/duck/Mongolia/118/2015 (A/H4N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI540301 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI540293 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI704420 A/duck/Mongolia/655/2015 (A/H2N3) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI704386 A/duck/Mongolia/482/2015 (A/H2N3) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI693712 A/duck/Mongolia/66/2015 (A/H10N2) segment 2 (PB1) 3764.6 0.000000e+00 2198/2277 (96%) EPI692566 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI527621 A/northern shoveler/Mongolia/899V/2009 (A/H3N6) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI400164 A/chicken/Nanjing/908/2009 (A/H11N2) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI372487 A/garganey/Ukraine/05834-NAMRU3/2006 (A/H10N9) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI269009 A/duck/Hunan/491/2005 (A/H6N2) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI683152 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI683125 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 2 (PB1) 3759.1 0.000000e+00 2194/2274 (96%) EPI618509 A/mallard/Sweden/4932/2004 (A/H9N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI540197 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 2 (PB1) 3759.1 0.000000e+00 2194/2274 (96%) EPI401307 A/duck/Korea/DY104/2007 (A/H4N6) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3759.1 0.000000e+00 2195/2275 (96%) EPI806628 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 2 (PB1) 3753.5 0.000000e+00 2195/2276 (96%) EPI704542 A/duck/Mongolia/742/2015 (A/H10N7) segment 2 (PB1) 3753.5 0.000000e+00 2193/2274 (96%) EPI704378 A/duck/Mongolia/405/2015 (A/H3N6) segment 2 (PB1) 3753.5 0.000000e+00 2193/2274 (96%) EPI704305 A/duck/Mongolia/154/2015 (A/H0N2) segment 2 (PB1) 3753.5 0.000000e+00 2196/2277 (96%) EPI618255 A/mallard/Sweden/79196/2008 (A/H0) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI600151 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI513699 A/mallard/Sweden/80014/2008 (A/H4N6) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2151/2151 (100%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2149/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2149/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3958.5 0.000000e+00 2147/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3954.8 0.000000e+00 2146/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3951.1 0.000000e+00 2147/2152 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3703.7 0.000000e+00 2101/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3664.9 0.000000e+00 2095/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3648.3 0.000000e+00 2092/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3642.7 0.000000e+00 2091/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3642.7 0.000000e+00 2091/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3640.9 0.000000e+00 2074/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3626.1 0.000000e+00 2090/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3626.1 0.000000e+00 2088/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3620.6 0.000000e+00 2087/2152 (96%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3615.0 0.000000e+00 2087/2153 (96%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3615.0 0.000000e+00 2066/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3615.0 0.000000e+00 2085/2151 (96%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3613.2 0.000000e+00 2065/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3609.5 0.000000e+00 2085/2152 (96%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3603.9 0.000000e+00 2084/2152 (96%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3598.4 0.000000e+00 2084/2153 (96%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3598.4 0.000000e+00 2083/2152 (96%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3592.9 0.000000e+00 2082/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3592.9 0.000000e+00 2082/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3587.3 0.000000e+00 2081/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3587.3 0.000000e+00 2080/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3587.3 0.000000e+00 2080/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3579.9 0.000000e+00 2062/2125 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3574.4 0.000000e+00 2061/2126 (96%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3572.5 0.000000e+00 2046/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3570.7 0.000000e+00 2078/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3570.7 0.000000e+00 2078/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3565.2 0.000000e+00 2078/2153 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3559.6 0.000000e+00 2077/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3554.1 0.000000e+00 2076/2153 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3548.5 0.000000e+00 2075/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3548.5 0.000000e+00 2073/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3543.0 0.000000e+00 2072/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3543.0 0.000000e+00 2074/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3543.0 0.000000e+00 2073/2152 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3543.0 0.000000e+00 2072/2151 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3537.5 0.000000e+00 2072/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3531.9 0.000000e+00 2072/2153 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3526.4 0.000000e+00 2071/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3526.4 0.000000e+00 2071/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3526.4 0.000000e+00 2069/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3526.4 0.000000e+00 2069/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3520.8 0.000000e+00 2070/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3520.8 0.000000e+00 2068/2151 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3515.3 0.000000e+00 2067/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3504.2 0.000000e+00 2066/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3504.2 0.000000e+00 2065/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3498.7 0.000000e+00 2064/2151 (95%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3498.7 0.000000e+00 2065/2152 (95%) EPI372327 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 3 (PA) 3498.7 0.000000e+00 2064/2151 (95%) EPI296254 A/wild duck/Korea/HDR02/2005 (A/H1N1) segment 3 (PA) 3493.1 0.000000e+00 2063/2151 (95%) EPI591120 A/duck/Jiangxi/5444/2014 (A/H7N3) segment 3 (PA) 3487.6 0.000000e+00 2063/2152 (95%) EPI511225 A/mallard/Sweden/75279/2008 (A/H4N6) segment 3 (PA) 3487.6 0.000000e+00 2063/2152 (95%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2702.8 0.000000e+00 1463/1463 (100%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2697.2 0.000000e+00 1462/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2686.1 0.000000e+00 1460/1463 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2558.7 0.000000e+00 1437/1463 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2553.2 0.000000e+00 1436/1463 (98%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2542.1 0.000000e+00 1434/1463 (98%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2531.0 0.000000e+00 1432/1463 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1430/1463 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2514.4 0.000000e+00 1429/1463 (97%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2512.6 0.000000e+00 1418/1447 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2508.9 0.000000e+00 1428/1463 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2503.3 0.000000e+00 1427/1463 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2497.8 0.000000e+00 1426/1463 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2492.3 0.000000e+00 1425/1463 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2492.3 0.000000e+00 1425/1463 (97%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2486.7 0.000000e+00 1416/1451 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2486.7 0.000000e+00 1425/1464 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2481.2 0.000000e+00 1424/1464 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2475.6 0.000000e+00 1422/1463 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2475.6 0.000000e+00 1423/1464 (97%) EPI816840 A/turkey/Poland/08/2014 (A/H9N2) segment 5 (NP) 2471.9 0.000000e+00 1406/1440 (97%) EPI484288 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2471.9 0.000000e+00 1404/1437 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2470.1 0.000000e+00 1422/1464 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2470.1 0.000000e+00 1422/1464 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2470.1 0.000000e+00 1421/1463 (97%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2459.0 0.000000e+00 1419/1463 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2453.5 0.000000e+00 1419/1464 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2453.5 0.000000e+00 1419/1464 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2449.8 0.000000e+00 1402/1440 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2449.8 0.000000e+00 1402/1440 (97%) EPI463229 A/mallard/Sweden/100633/2009 (A/H6N2) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2447.9 0.000000e+00 1417/1463 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2442.4 0.000000e+00 1416/1463 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2436.9 0.000000e+00 1415/1463 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2436.9 0.000000e+00 1415/1463 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI118136 A/mallard/Italy/36/2002 (A/H5N3) segment 5 (NP) 2431.3 0.000000e+00 1415/1464 (96%) EPI463238 A/mallard/Sweden/101288/2009 (A/H5N3) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2425.8 0.000000e+00 1413/1463 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2425.8 0.000000e+00 1414/1464 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI463241 A/mallard/Sweden/101368/2009 (A/H4N6) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2420.2 0.000000e+00 1412/1463 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2420.2 0.000000e+00 1413/1464 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2416.5 0.000000e+00 1411/1463 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513561 A/mallard/Sweden/101180/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513540 A/mallard/Sweden/100881/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513501 A/mallard/Sweden/101431/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513487 A/mallard/Sweden/101298/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513217 A/mallard/Sweden/104793/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513210 A/mallard/Sweden/104690/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI513206 A/mallard/Sweden/102250/2009 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI314216 A/wild duck/Taiwan/WB147/2001 (A/H4N6) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2414.7 0.000000e+00 1412/1464 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2414.7 0.000000e+00 1411/1463 (96%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2409.2 0.000000e+00 1410/1463 (96%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 835/835 (100%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1539.4 0.000000e+00 834/835 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1528.3 0.000000e+00 832/835 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1528.3 0.000000e+00 832/835 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 826/835 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 827/835 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1495.1 0.000000e+00 826/835 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 824/835 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 823/836 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 821/836 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 820/836 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 819/836 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 818/836 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1445.2 0.000000e+00 818/836 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 818/837 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 817/836 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 818/837 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 816/836 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 815/836 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1428.6 0.000000e+00 815/836 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1406.4 0.000000e+00 811/836 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 810/836 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 810/836 (96%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1395.3 0.000000e+00 809/836 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1389.8 0.000000e+00 808/836 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1384.3 0.000000e+00 807/836 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1378.7 0.000000e+00 806/836 (96%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI601057 A/duck/Jiangxi/5879/2008 (A/H0) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1373.2 0.000000e+00 806/837 (96%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1373.2 0.000000e+00 806/837 (96%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI276117 A/pintail/Miyagi/1472/2008 (A/H1N1) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI268476 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI118253 A/migratory duck/Hong Kong/MP2553/2003 (A/H8N4) segment 8 (NS) 1373.2 0.000000e+00 805/836 (96%) EPI692476 A/duck/Henan/S4179/2009 (A/H4N6) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI600980 A/duck/Jiangxi/5916/2008 (A/H0) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI527757 A/mallard/San Jiang/275/2007 (A/H6N1) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI471877 A/duck/Guangxi/GXd-6/2010 (A/H6N8) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470648 A/duck/Jiangxi/3292/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470644 A/duck/Jiangxi/9631/2009 (A/H7N8) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470642 A/duck/Jiangxi/3257/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%) EPI470641 A/duck/Jiangxi/3152/2009 (A/H7N9) segment 8 (NS) 1367.6 0.000000e+00 804/836 (96%)
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