niman Posted November 30, 2016 Report Posted November 30, 2016 Novel Influenza A Virus: One human infection with a novel influenza A virus was reported by the state of Iowa. The person was infected with an influenza A (H1N2) variant (H1N2v) virus. The patient was not hospitalized, and has fully recovered from their illness. No human-to-human transmission has been identified and the case reported close contact with swine in the week prior to illness onset. http://www.cdc.gov/flu/weekly/#S1
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Isolate detail Isolate name: A/Iowa/32/2016 Isolate ID: EPI_ISL_238918 Passage details/history: OR Type: A / H1N2 Lineage: Sample information Collection date: 2016-11-04 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: United States / Iowa Additional location information: Patient age: Gender: Outbreak: Treatment: Specimen source: Institute information Originating lab: Iowa State Hygienic Laboratory Sample ID given by the sample provider: 449121 ORIGINAL Address: Iowa State Hygienic Laboratory UI Research Park Iowa City, 52242 United States Submitting lab: Centers for Disease Control and Prevention Sample ID given by the submitting laboratory: Authors: Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 3000414195_299902_v1_1 2264 EPI864024 PB1 3000414195_299902_v1_2 2269 EPI864025 PA 3000414195_299902_v1_3 2151 EPI864023 HA 3000414195_299902_v1_4 1690 EPI864027 NP 3000414195_299902_v1_5 1497 EPI864020 NA 3000414195_299902_v1_6 1391 EPI864026 MP 3000414195_299902_v1_7 982 EPI864022 NS 3000414195_299902_v1_8 838 EPI864021 Submitter information Submitter: Jang, Yunho Submission Date: 2016-11-30 Last modifier: Jang, Yunho Last modified: 2016-11-30 Address: Centers for Disease Control and Prevention WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division 1600 Clifton Road, N.E. Atlanta, GA 30333 United States
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI762010 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 4 (HA) 3083.2 0.000000e+00 1683/1690 (99%) EPI753589 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 4 (HA) 3083.2 0.000000e+00 1683/1690 (99%) EPI736626 A/swine/Illinois/A01730554/2016 (A/H0) segment 4 (HA) 3079.5 0.000000e+00 1682/1690 (99%) EPI703846 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI703826 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI687679 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI682726 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI753592 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687682 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687676 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687673 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI762007 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 4 (HA) 3068.4 0.000000e+00 1680/1690 (99%) EPI672966 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 4 (HA) 3064.7 0.000000e+00 1679/1690 (99%) EPI682794 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 4 (HA) 3061.0 0.000000e+00 1679/1690 (99%) EPI703963 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 4 (HA) 3059.2 0.000000e+00 1678/1690 (99%) EPI672890 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 4 (HA) 3057.3 0.000000e+00 1678/1690 (99%) EPI762144 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 4 (HA) 3055.5 0.000000e+00 1678/1690 (99%) EPI672960 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 4 (HA) 3055.5 0.000000e+00 1677/1690 (99%) EPI760176 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 4 (HA) 3049.9 0.000000e+00 1677/1690 (99%) EPI711746 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 4 (HA) 3044.4 0.000000e+00 1676/1690 (99%) EPI678599 A/swine/Indiana/A01945405/2015 (A/H1N2) segment 4 (HA) 3044.4 0.000000e+00 1676/1690 (99%) EPI678415 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 4 (HA) 3040.7 0.000000e+00 1675/1690 (99%) EPI678321 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 4 (HA) 3038.9 0.000000e+00 1675/1690 (99%) EPI590668 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 4 (HA) 3027.8 0.000000e+00 1673/1690 (98%) EPI647507 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 4 (HA) 3022.2 0.000000e+00 1672/1690 (98%) EPI620645 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 4 (HA) 3022.2 0.000000e+00 1672/1690 (98%) EPI620704 A/swine/Illinois/A01470835/2015 (A/H1N2) segment 4 (HA) 3016.7 0.000000e+00 1671/1690 (98%) EPI590793 A/swine/Illinois/A01470861/2015 (A/H1N2) segment 4 (HA) 3016.7 0.000000e+00 1671/1690 (98%) EPI586157 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 4 (HA) 3013.0 0.000000e+00 1670/1690 (98%) EPI620608 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586145 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586133 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586130 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI584814 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI584790 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI620499 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI586068 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI586032 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI584793 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI718308 A/swine/Illinois/A01729512/2016 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI682791 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI647622 A/swine/Michigan/A01104086/2015 (A/H0) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI647578 A/swine/Illinois/A02034785/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI641443 A/swine/Indiana/A02077934/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI623684 A/swine/Illinois/A01822445/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612717 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612547 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612538 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586160 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586142 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586014 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI584740 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI669233 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI612580 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI586136 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI704601 A/swine/Illinois/A01727702/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI687588 A/swine/Minnesota/A01941141/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI682700 A/swine/Iowa/A01944834/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI647528 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI641541 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI612723 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI612556 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI586118 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI620508 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 4 (HA) 2998.2 0.000000e+00 1667/1690 (98%) EPI586148 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 4 (HA) 2996.4 0.000000e+00 1667/1690 (98%) EPI586035 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 4 (HA) 2996.4 0.000000e+00 1666/1690 (98%) EPI760246 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI704956 A/swine/Indiana/A01727661/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI703930 A/swine/Illinois/A01896114/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI703918 A/swine/Illinois/A01797679/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI687661 A/swine/Illinois/A01797392/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI685642 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI682788 A/swine/Illinois/A01749186/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI678641 A/swine/Iowa/A01795376/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI678608 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI669218 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI621370 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1668/1691 (98%) EPI620540 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1666/1690 (98%) EPI678287 A/swine/Iowa/A01945639/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1666/1690 (98%) EPI672878 A/swine/Illinois/A01945130/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1667/1691 (98%) EPI641532 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1667/1691 (98%) EPI737399 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1667/1691 (98%) EPI736620 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704923 A/swine/Illinois/A01796671/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704883 A/swine/Iowa/A01941556/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704819 A/swine/Illinois/A01749578/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI703849 A/swine/Illinois/A01797468/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI687670 A/swine/Illinois/A01749362/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI687652 A/swine/Iowa/A01797314/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI682756 A/swine/Iowa/A01945940/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI678278 A/swine/Iowa/A01795438/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653056 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653035 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653021 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653014 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI645050 A/swine/Illinois/A02090176/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1667/1691 (98%) EPI612535 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI682744 A/swine/Illinois/A01944886/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI620614 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI612517 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI762011 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 6 (NA) 2553.2 0.000000e+00 1386/1388 (99%) EPI762008 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI753590 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI736627 A/swine/Illinois/A01730554/2016 (A/H0) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI753593 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 6 (NA) 2542.1 0.000000e+00 1384/1388 (99%) EPI711747 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 6 (NA) 2542.1 0.000000e+00 1384/1388 (99%) EPI762145 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI703964 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI682727 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672967 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672961 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672891 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI703828 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 6 (NA) 2531.0 0.000000e+00 1382/1388 (99%) EPI682796 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 6 (NA) 2531.0 0.000000e+00 1382/1388 (99%) EPI703847 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 6 (NA) 2527.3 0.000000e+00 1381/1388 (99%) EPI687684 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687681 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687678 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687675 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI760177 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 6 (NA) 2520.0 0.000000e+00 1380/1388 (99%) EPI647508 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 6 (NA) 2514.4 0.000000e+00 1379/1388 (99%) EPI620646 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 6 (NA) 2514.4 0.000000e+00 1379/1388 (99%) EPI678416 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 6 (NA) 2505.2 0.000000e+00 1377/1388 (99%) EPI678322 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 6 (NA) 2503.3 0.000000e+00 1377/1388 (99%) EPI678600 A/swine/Indiana/A01945405/2015 (A/H1N2) segment 6 (NA) 2499.6 0.000000e+00 1376/1388 (99%) EPI682793 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI682790 A/swine/Illinois/A01749186/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI671811 A/swine/Indiana/A02025965/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI641542 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612581 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612536 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612518 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612515 A/swine/Ohio/A02077256/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586161 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586146 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586143 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586134 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586131 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586122 A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586119 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586069 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586036 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586033 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586015 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI584741 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI678609 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 6 (NA) 2494.1 0.000000e+00 1375/1388 (99%) EPI590669 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 6 (NA) 2494.1 0.000000e+00 1374/1386 (99%) EPI737400 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI736621 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI704821 A/swine/Illinois/A01749578/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI687589 A/swine/Minnesota/A01941141/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI685643 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI682701 A/swine/Iowa/A01944834/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI669219 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653058 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653037 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653023 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653016 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI641835 A/swine/Illinois/A02034146/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI641618 A/swine/Illinois/A02024907/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI621372 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI612719 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI612557 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1376/1389 (99%) EPI586158 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI586149 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI586137 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI584791 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI764475 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI753599 A/swine/Oklahoma/A01733480/2016 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI620509 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI612539 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI584815 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI736818 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI704864 A/swine/Indiana/A01727661/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI703894 A/swine/Oklahoma/A01798161/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI678288 A/swine/Iowa/A01945639/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI641536 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI623695 A/swine/Indiana/A01260875/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620615 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620609 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620541 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620500 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI590795 A/swine/Illinois/A01470861/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI584794 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI678298 A/swine/Indiana/A01945739/2015 (A/H1N2) segment 6 (NA) 2483.0 0.000000e+00 1373/1388 (98%) EPI838551 A/swine/Indiana/A01778290/2016 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI718309 A/swine/Illinois/A01729512/2016 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI689986 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI687653 A/swine/Iowa/A01797314/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI682757 A/swine/Iowa/A01945940/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI678425 A/swine/Oklahoma/A01857957/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI678272 A/swine/Indiana/A01945744/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI669234 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI647529 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI612725 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI612549 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI762037 A/swine/Indiana/A01732805/2016 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1373/1389 (98%) EPI678558 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1372/1388 (98%) EPI641533 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1373/1389 (98%) EPI760248 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864022 A/Iowa/32/2016 (A/H1N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI762012 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI762009 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI753594 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI736628 A/swine/Illinois/A01730554/2016 (A/H0) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI753591 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703965 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703848 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703827 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687683 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687680 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687677 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI682795 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI682728 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672968 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672962 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672892 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI647509 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI711748 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 7 (MP) 1794.2 0.000000e+00 979/983 (99%) EPI612519 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 7 (MP) 1794.2 0.000000e+00 979/983 (99%) EPI854007 A/swine/Indiana/A01732606/2016 (A/H1N1) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI764476 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI762146 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI760247 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI753612 A/swine/Oklahoma/A01733331/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI737401 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI736622 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI718316 A/swine/Oklahoma/A01729483/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI704613 A/swine/Indiana/A01727837/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI687674 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI682792 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678663 A/swine/Oklahoma/A01944545/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678417 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678323 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641619 A/swine/Illinois/A02024907/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641537 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641534 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI620647 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI620501 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612540 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612537 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612516 A/swine/Ohio/A02077256/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI590670 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586162 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586159 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586150 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586147 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586144 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586138 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586135 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586123 A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586120 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586070 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586016 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584816 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584795 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584792 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584742 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586132 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 7 (MP) 1788.7 0.000000e+00 978/983 (99%) EPI764452 A/swine/Illinois/A01894756/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI762015 A/swine/Illinois/A01732936/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI760178 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI736819 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI736637 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI709873 A/swine/Ohio/A01728296/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI703929 A/swine/Ohio/A01798226/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI703913 A/swine/Arkansas/A01798224/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685644 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685641 A/swine/Iowa/A02025170/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685636 A/swine/Iowa/A02025166/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI684597 A/swine/Arkansas/A01797067/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI684589 A/swine/Arkansas/A01797066/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI682813 A/swine/Ohio/A01795737/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI682722 A/swine/Arkansas/A01797068/2015 (A/H1N1) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678660 A/swine/Illinois/A01945555/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678610 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678580 A/swine/Arkansas/A01945350/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678426 A/swine/Oklahoma/A01857957/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678302 A/swine/Arkansas/A01945580/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653038 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653024 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653017 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI647530 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI645051 A/swine/Illinois/A02090176/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI641836 A/swine/Illinois/A02034146/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI641445 A/swine/Indiana/A02077934/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI623686 A/swine/Illinois/A01822445/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI621371 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620616 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620610 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620542 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620510 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612724 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612718 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612582 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612558 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612548 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI600311 A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI586037 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI586034 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864024 A/Iowa/32/2016 (A/H1N2) segment 1 (PB2) 4181.9 0.000000e+00 2264/2264 (100%) EPI839955 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 1 (PB2) 4154.2 0.000000e+00 2259/2264 (99%) EPI840047 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 1 (PB2) 4148.7 0.000000e+00 2258/2264 (99%) EPI840057 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 1 (PB2) 4143.2 0.000000e+00 2257/2264 (99%) EPI839978 A/swine/Arkansas/A02024656/2015 (A/H1N2) segment 1 (PB2) 4143.2 0.000000e+00 2257/2264 (99%) EPI839829 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 1 (PB2) 4143.2 0.000000e+00 2257/2264 (99%) EPI838559 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 1 (PB2) 4143.2 0.000000e+00 2257/2264 (99%) EPI839896 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI837253 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI761968 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI653054 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI653033 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI653019 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI653012 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 1 (PB2) 4137.6 0.000000e+00 2256/2264 (99%) EPI839964 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 1 (PB2) 4132.1 0.000000e+00 2255/2264 (99%) EPI845472 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 1 (PB2) 4126.5 0.000000e+00 2254/2264 (99%) EPI845448 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 1 (PB2) 4126.5 0.000000e+00 2254/2264 (99%) EPI840037 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 1 (PB2) 4126.5 0.000000e+00 2254/2264 (99%) EPI689981 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 1 (PB2) 4126.5 0.000000e+00 2254/2264 (99%) EPI647620 A/swine/Michigan/A01104086/2015 (A/H0) segment 1 (PB2) 4126.5 0.000000e+00 2254/2264 (99%) EPI845462 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI845413 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI838564 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI838490 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI837155 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI753752 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 1 (PB2) 4121.0 0.000000e+00 2253/2264 (99%) EPI845474 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 1 (PB2) 4115.5 0.000000e+00 2252/2264 (99%) EPI839880 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 1 (PB2) 4115.5 0.000000e+00 2252/2264 (99%) EPI838569 A/swine/Iowa/A01727251/2015 (A/H1N1) segment 1 (PB2) 4115.5 0.000000e+00 2252/2264 (99%) EPI855120 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 1 (PB2) 4109.9 0.000000e+00 2251/2264 (99%) EPI855176 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 1 (PB2) 4104.4 0.000000e+00 2250/2264 (99%) EPI845541 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 1 (PB2) 4104.4 0.000000e+00 2250/2264 (99%) EPI838513 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 1 (PB2) 4104.4 0.000000e+00 2250/2264 (99%) EPI816887 A/Wisconsin/71/2016 (A/H1N2) segment 1 (PB2) 4104.4 0.000000e+00 2250/2264 (99%) EPI669176 A/swine/Indiana/A01260958/2015 (A/H3N2) segment 1 (PB2) 4098.8 0.000000e+00 2249/2264 (99%) EPI837206 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 1 (PB2) 4082.2 0.000000e+00 2246/2264 (99%) EPI653961 A/swine/Kansas/A01377243/2014 (A/H3N2) segment 1 (PB2) 4076.7 0.000000e+00 2245/2264 (99%) EPI653952 A/swine/North Carolina/A01410354/2014 (A/H3N2) segment 1 (PB2) 4076.7 0.000000e+00 2245/2264 (99%) EPI855135 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI837337 A/swine/Indiana/A01812235/2016 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI778167 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI397537 A/Ohio/56/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI395945 A/swine/Indiana/A00968376/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI395937 A/swine/Indiana/A00968373/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI395737 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI378520 A/Indiana/09/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI378512 A/Indiana/07/2012 (A/H3N2) segment 1 (PB2) 4071.1 0.000000e+00 2244/2264 (99%) EPI839797 A/swine/Arkansas/A01476717/2014 (A/H1N1) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI468742 A/swine/Illinois/A01432127/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI446883 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI446875 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI446859 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI446826 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI401654 A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI398539 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI398531 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI398523 A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI398001 A/Ohio/84/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI397967 A/Wisconsin/34/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI397680 A/Wisconsin/31/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI397679 A/Wisconsin/29/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI397678 A/Ohio/86/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI396189 A/Ohio/77/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI395953 A/swine/Indiana/A00968379/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI395871 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI395863 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI394946 A/Ohio/64/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI394074 A/Wisconsin/27/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI393779 A/Ohio/74/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI393674 A/Ohio/15/2012 (A/H3N2) segment 1 (PB2) 4065.6 0.000000e+00 2243/2264 (99%) EPI397998 A/Ohio/18/2012 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2242/2264 (99%) EPI397683 A/Ohio/57/2012 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2242/2264 (99%) EPI378507 A/Indiana/07/2012 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2239/2259 (99%) EPI838505 A/swine/Indiana/A01812246/2016 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI838446 A/swine/Indiana/A01812245/2016 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI838279 A/Michigan/94/2016 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI838248 A/Michigan/84/2016 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI467756 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI414175 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI401712 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI401656 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI398035 A/Ohio/69/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI398002 A/Ohio/88/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI397995 A/Hawaii/03/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI397675 A/Ohio/79/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI397437 A/Wisconsin/30/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI396267 A/Indiana/133/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI395274 A/Ohio/75/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI394930 A/Wisconsin/23/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI394910 A/Indiana/132/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI392753 A/Indiana/14/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI392745 A/Wisconsin/22/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI392732 A/Pennsylvania/13/2012 (A/H3N2) segment 1 (PB2) 4060.1 0.000000e+00 2242/2264 (99%) EPI397676 A/Ohio/80/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2241/2264 (98%) EPI397423 A/Minnesota/15/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2241/2264 (98%) EPI678474 A/swine/North Carolina/A01476787/2014 (A/H1N2) segment 1 (PB2) 4054.5 0.000000e+00 2241/2264 (98%) EPI467752 A/swine/Iowa/A01244302/2012 (A/H3N2) segment 1 (PB2) 4054.5 0.000000e+00 2241/2264 (98%) EPI467747 A/swine/Illinois/A01244401/2012 (A/H1N1) segment 1 (PB2) 4054.5 0.000000e+00 2241/2264 (98%) EPI451220 A/swine/Ohio/A01208180/2012 (A/H3N2) segment 1 (PB2) 4054.5 0.000000e+00 2241/2264 (98%) EPI451199 A/swine/Alabama/A01104056/2012 (A/H0) segment 1 (PB2) 4054.5 0.000000e+00 2241/2264 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864025 A/Iowa/32/2016 (A/H1N2) segment 2 (PB1) 4191.2 0.000000e+00 2269/2269 (100%) EPI840048 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 2 (PB1) 4126.5 0.000000e+00 2256/2267 (99%) EPI839979 A/swine/Arkansas/A02024656/2015 (A/H1N2) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI653055 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI653034 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI653020 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI653013 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 2 (PB1) 4121.0 0.000000e+00 2255/2267 (99%) EPI840038 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 2 (PB1) 4115.5 0.000000e+00 2254/2267 (99%) EPI839965 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 2 (PB1) 4115.5 0.000000e+00 2254/2267 (99%) EPI839897 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 2 (PB1) 4115.5 0.000000e+00 2254/2267 (99%) EPI838491 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 2 (PB1) 4115.5 0.000000e+00 2254/2267 (99%) EPI647621 A/swine/Michigan/A01104086/2015 (A/H0) segment 2 (PB1) 4115.5 0.000000e+00 2254/2267 (99%) EPI837148 A/swine/Indiana/A01812236/2016 (A/H1N2) segment 2 (PB1) 4113.6 0.000000e+00 2255/2269 (99%) EPI839881 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 2 (PB1) 4109.9 0.000000e+00 2253/2267 (99%) EPI839830 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 2 (PB1) 4109.9 0.000000e+00 2253/2267 (99%) EPI753753 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 2 (PB1) 4109.9 0.000000e+00 2253/2267 (99%) EPI845449 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 2 (PB1) 4098.8 0.000000e+00 2251/2267 (99%) EPI838558 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 2 (PB1) 4098.8 0.000000e+00 2251/2267 (99%) EPI837254 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 2 (PB1) 4098.8 0.000000e+00 2251/2267 (99%) EPI837156 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 2 (PB1) 4093.3 0.000000e+00 2250/2267 (99%) EPI840058 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 2 (PB1) 4089.6 0.000000e+00 2248/2267 (99%) EPI845475 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 2 (PB1) 4082.2 0.000000e+00 2248/2267 (99%) EPI838519 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 2 (PB1) 4082.2 0.000000e+00 2248/2267 (99%) EPI837207 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 2 (PB1) 4082.2 0.000000e+00 2248/2267 (99%) EPI761969 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 2 (PB1) 4082.2 0.000000e+00 2248/2267 (99%) EPI838568 A/swine/Iowa/A01727251/2015 (A/H1N1) segment 2 (PB1) 4076.7 0.000000e+00 2247/2267 (99%) EPI838563 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 2 (PB1) 4076.7 0.000000e+00 2247/2267 (99%) EPI845543 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 2 (PB1) 4071.1 0.000000e+00 2246/2267 (99%) EPI845463 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 2 (PB1) 4071.1 0.000000e+00 2246/2267 (99%) EPI845415 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 2 (PB1) 4071.1 0.000000e+00 2246/2267 (99%) EPI468741 A/swine/Indiana/A01260254/2013 (A/H3N2) segment 2 (PB1) 4071.1 0.000000e+00 2246/2267 (99%) EPI845473 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 2 (PB1) 4065.6 0.000000e+00 2245/2267 (99%) EPI816888 A/Wisconsin/71/2016 (A/H1N2) segment 2 (PB1) 4065.6 0.000000e+00 2245/2267 (99%) EPI653962 A/swine/Kansas/A01377243/2014 (A/H3N2) segment 2 (PB1) 4065.6 0.000000e+00 2245/2267 (99%) EPI653953 A/swine/North Carolina/A01410354/2014 (A/H3N2) segment 2 (PB1) 4065.6 0.000000e+00 2245/2267 (99%) EPI855175 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 2 (PB1) 4060.1 0.000000e+00 2244/2267 (98%) EPI855136 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 2 (PB1) 4060.1 0.000000e+00 2245/2268 (98%) EPI855121 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 2 (PB1) 4060.1 0.000000e+00 2244/2267 (98%) EPI669177 A/swine/Indiana/A01260958/2015 (A/H3N2) segment 2 (PB1) 4060.1 0.000000e+00 2244/2267 (98%) EPI557540 A/Wisconsin/24/2014 (A/H3N2) segment 2 (PB1) 4060.1 0.000000e+00 2244/2267 (98%) EPI839798 A/swine/Arkansas/A01476717/2014 (A/H1N1) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI838506 A/swine/Indiana/A01812246/2016 (A/H3N2) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI838447 A/swine/Indiana/A01812245/2016 (A/H3N2) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI838280 A/Michigan/94/2016 (A/H3N2) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI838249 A/Michigan/84/2016 (A/H3N2) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI837338 A/swine/Indiana/A01812235/2016 (A/H3N2) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI673009 A/swine/North Carolina/120138/2014 (A/H1N1) segment 2 (PB1) 4049.0 0.000000e+00 2242/2267 (98%) EPI839838 A/swine/Arkansas/A01840184/2014 (A/H1N1) segment 2 (PB1) 4043.4 0.000000e+00 2241/2267 (98%) EPI838501 A/swine/Iowa/A01941921/2015 (A/H3N2) segment 2 (PB1) 4043.4 0.000000e+00 2241/2267 (98%) EPI778168 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 2 (PB1) 4043.4 0.000000e+00 2241/2267 (98%) EPI459156 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 2 (PB1) 4043.4 0.000000e+00 2241/2267 (98%) EPI691510 A/swine/Indiana/A01260976/2015 (A/H3N2) segment 2 (PB1) 4037.9 0.000000e+00 2241/2268 (98%) EPI645057 A/swine/Indiana/A01260926/2015 (A/H3N2) segment 2 (PB1) 4037.9 0.000000e+00 2240/2267 (98%) EPI642511 A/Michigan/39/2015 (A/H3N2) segment 2 (PB1) 4037.9 0.000000e+00 2240/2267 (98%) EPI396195 A/Ohio/78/2012 (A/H3N2) segment 2 (PB1) 4037.9 0.000000e+00 2240/2267 (98%) EPI692955 A/swine/Illinois/A00843253/2015 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI690488 A/swine/Wisconsin/A01104088/2015 (A/H1N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI678475 A/swine/North Carolina/A01476787/2014 (A/H1N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI467751 A/swine/Illinois/A01244401/2012 (A/H1N1) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI433531 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI433525 A/swine/Indiana/A01260041/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI414184 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI414176 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI414168 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI401683 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI401679 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI401666 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI398516 A/swine/Ohio/A01133464/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397937 A/Ohio/41/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397757 A/Wisconsin/35/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397530 A/Ohio/47/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397522 A/Ohio/44/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397514 A/Ohio/36/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397430 A/Ohio/81/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397383 A/Indiana/138/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397349 A/Ohio/37/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397337 A/Hawaii/03/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI397094 A/Ohio/34/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI396297 A/Maryland/23/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI396260 A/Indiana/127/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI396252 A/Indiana/126/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI395292 A/Maryland/25/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI395285 A/Ohio/71/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI395265 A/Ohio/65/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI395257 A/Ohio/35/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI395249 A/Indiana/152/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI393693 A/West Virginia/16/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI393304 A/Indiana/18/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI388280 A/Indiana/13/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI381871 A/Hawaii/03/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI381847 A/Indiana/12/2012 (A/H3N2) segment 2 (PB1) 4032.4 0.000000e+00 2239/2267 (98%) EPI398477 A/swine/Maryland/A01104040/2012 (A/H3N2) segment 2 (PB1) 4028.7 0.000000e+00 2238/2267 (98%) EPI397221 A/Indiana/144/2012 (A/H3N2) segment 2 (PB1) 4028.7 0.000000e+00 2238/2267 (98%) EPI395738 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 2 (PB1) 4028.7 0.000000e+00 2238/2267 (98%) EPI388288 A/Indiana/17/2012 (A/H3N2) segment 2 (PB1) 4028.7 0.000000e+00 2238/2267 (98%) EPI845507 A/swine/Illinois/A01731417/2016 (A/H1N2) segment 2 (PB1) 4026.8 0.000000e+00 2238/2267 (98%) EPI837196 A/swine/North Carolina/A01797589/2015 (A/H1N1) segment 2 (PB1) 4026.8 0.000000e+00 2239/2268 (98%) EPI433570 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 2 (PB1) 4026.8 0.000000e+00 2238/2267 (98%) EPI401608 A/swine/Ohio/A00138552/2012 (A/H3N2) segment 2 (PB1) 4026.8 0.000000e+00 2238/2267 (98%) EPI398498 A/swine/Ohio/A01133466/2012 (A/H3N2) segment 2 (PB1) 4026.8 0.000000e+00 2238/2267 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864023 A/Iowa/32/2016 (A/H1N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI840049 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 3 (PA) 3934.5 0.000000e+00 2144/2151 (99%) EPI839980 A/swine/Arkansas/A02024656/2015 (A/H1N2) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI839956 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI837149 A/swine/Indiana/A01812236/2016 (A/H1N2) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI816886 A/Wisconsin/71/2016 (A/H1N2) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI855122 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI845450 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI840059 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI840039 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI837208 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI652828 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI647418 A/swine/Michigan/A01104086/2015 (A/H0) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI845416 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI840014 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI652822 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI652820 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI652818 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI855177 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 3 (PA) 3908.6 0.000000e+00 2139/2151 (99%) EPI845488 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI839831 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI837255 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI778169 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI845476 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI839966 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI839898 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI838565 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI855137 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI845464 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI839882 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI838520 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI837157 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI689983 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI838570 A/swine/Iowa/A01727251/2015 (A/H1N1) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI838560 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI753754 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI816878 A/Minnesota/70/2016 (A/H1N2) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI761970 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI652841 A/swine/North Carolina/A01410354/2014 (A/H3N2) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI652838 A/swine/Kansas/A01377243/2014 (A/H3N2) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI663537 A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI838492 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI467767 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI845542 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI395325 A/West Virginia/06/2011 (A/H3N2) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI346489 A/West Virginia/06/2011 (A/H3N2) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI839839 A/swine/Arkansas/A01840184/2014 (A/H1N1) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI557538 A/Wisconsin/24/2014 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI547637 A/swine/Iowa/A01445629/2013 (A/H1N1) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI502444 A/swine/Indiana/A01260109/2012 (A/H1N1) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI459158 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI451201 A/swine/Alabama/A01104056/2012 (A/H0) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI414177 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI401713 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI398541 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI398533 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI398478 A/swine/Maryland/A01104040/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397944 A/Ohio/84/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397929 A/Ohio/19/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397922 A/Ohio/18/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397903 A/Hawaii/03/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397747 A/Ohio/87/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397658 A/Maryland/28/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397552 A/Ohio/86/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397536 A/Ohio/56/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397436 A/Wisconsin/30/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI397353 A/Ohio/57/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI396295 A/Maryland/23/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI396198 A/Ohio/79/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI396188 A/Ohio/77/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI396173 A/Ohio/80/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395947 A/swine/Indiana/A00968376/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395939 A/swine/Indiana/A00968373/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395926 A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395918 A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395865 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395739 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI395290 A/Maryland/25/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI394945 A/Ohio/64/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI394941 A/Maryland/22/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI394914 A/Ohio/28/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI393778 A/Ohio/74/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI393685 A/Ohio/23/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI393507 A/Ohio/52/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI392922 A/Maryland/20/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI392744 A/Wisconsin/22/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI392731 A/Pennsylvania/13/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI388336 A/Ohio/16/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI388316 A/Ohio/20/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI388309 A/Ohio/15/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI388302 A/Ohio/14/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI381869 A/Hawaii/03/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI378519 A/Indiana/09/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI378511 A/Indiana/07/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI381853 A/Ohio/13/2012 (A/H3N2) segment 3 (PA) 3849.5 0.000000e+00 2128/2150 (98%) EPI394073 A/Wisconsin/27/2012 (A/H3N2) segment 3 (PA) 3847.7 0.000000e+00 2128/2151 (98%) EPI845508 A/swine/Illinois/A01731417/2016 (A/H1N2) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI839799 A/swine/Arkansas/A01476717/2014 (A/H1N1) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI652836 A/swine/Illinois/A00857134/2011 (A/H0) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI549362 A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864020 A/Iowa/32/2016 (A/H1N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI845489 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 5 (NP) 2737.9 0.000000e+00 1492/1497 (99%) EPI855178 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI845465 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI845417 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI840050 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI840040 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI840015 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI839873 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI647623 A/swine/Michigan/A01104086/2015 (A/H0) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI845478 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI840060 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI839967 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI839957 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI839899 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI839883 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI838561 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI653057 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI653036 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI653022 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI653015 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI838566 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI845451 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI837256 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI837159 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI761972 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI689985 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 5 (NP) 2704.6 0.000000e+00 1486/1497 (99%) EPI753756 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI845545 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI839981 A/swine/Arkansas/A02024656/2015 (A/H1N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI839971 A/swine/Iowa/A02025218/2015 (A/H1N1) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI838521 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI838493 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI855173 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI838571 A/swine/Iowa/A01727251/2015 (A/H1N1) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI837209 A/swine/Ohio/A01796509/2015 (A/H3N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI778171 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI663603 A/swine/Michigan/A01410962/2014 (A/H3N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI816883 A/Wisconsin/71/2016 (A/H1N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI669179 A/swine/Indiana/A01260958/2015 (A/H3N2) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI641659 A/swine/Iowa/A01394595/2013 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI468660 A/swine/Ohio/A01349305/2013 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI467900 A/swine/Ohio/A01349485/2013 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI397947 A/Ohio/85/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI397497 A/Indiana/104/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI397397 A/Indiana/99/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI397378 A/Indiana/138/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI396235 A/Indiana/103/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI396176 A/Indiana/77/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI395719 A/swine/Indiana/A01104023/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI395359 A/swine/Indiana/A01104016/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI395244 A/Indiana/152/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI388357 A/Indiana/16/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI388353 A/Indiana/21/2012 (A/H3N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI393512 A/Indiana/65/2012 (A/H3N2) segment 5 (NP) 2673.2 0.000000e+00 1480/1497 (98%) EPI615639 A/swine/Illinois/A01047044/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI615607 A/swine/Illinois/A01047046/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI615556 A/swine/Illinois/A01047045/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI593745 A/swine/Illinois/A01047041/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI593741 A/swine/Illinois/A01047042/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI593733 A/swine/Illinois/A01047024/2010 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI542340 A/swine/Ohio/10SW130/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI542335 A/swine/Ohio/10SW215/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI467759 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI433541 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI433534 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415211 A/swine/Ohio/10SW220/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415203 A/swine/Ohio/10SW219/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415195 A/swine/Ohio/10SW218/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415187 A/swine/Ohio/10SW216/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415171 A/swine/Ohio/10SW213/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415163 A/swine/Ohio/10SW212/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415155 A/swine/Ohio/10SW211/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415147 A/swine/Ohio/10SW210/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415139 A/swine/Ohio/10SW209/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415131 A/swine/Ohio/10SW208/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415123 A/swine/Ohio/10SW207/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415115 A/swine/Ohio/10SW206/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415107 A/swine/Ohio/10SW205/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415099 A/swine/Ohio/10SW204/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415091 A/swine/Ohio/10SW203/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415083 A/swine/Ohio/10SW202/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415075 A/swine/Ohio/10SW156/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415067 A/swine/Ohio/10SW139/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415059 A/swine/Ohio/10SW137/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415051 A/swine/Ohio/10SW136/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415035 A/swine/Ohio/10SW134/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415027 A/swine/Ohio/10SW133/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415019 A/swine/Ohio/10SW132/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415011 A/swine/Ohio/10SW131/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI415003 A/swine/Ohio/10SW128/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414995 A/swine/Ohio/10SW127/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414987 A/swine/Ohio/10SW126/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414979 A/swine/Ohio/10SW125/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414971 A/swine/Ohio/10SW122/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414963 A/swine/Ohio/10SW121/2010 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414187 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414179 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI414171 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI401714 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
niman Posted November 30, 2016 Author Report Posted November 30, 2016 Align Segment-ID Name Score E-Value Identity EPI864021 A/Iowa/32/2016 (A/H1N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI840051 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI647626 A/swine/Michigan/A01104086/2015 (A/H0) segment 8 (NS) 1528.3 0.000000e+00 833/836 (99%) EPI855124 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI840016 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI839982 A/swine/Arkansas/A02024656/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI839939 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI839874 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI838562 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI753759 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI689988 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI653018 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI845481 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 8 (NS) 1522.8 0.000000e+00 832/836 (99%) EPI653025 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 8 (NS) 1522.8 0.000000e+00 832/836 (99%) EPI845452 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI839958 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI839884 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI838522 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI837257 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI837162 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI778174 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI761975 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI653060 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%) EPI653039 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 8 (NS) 1517.2 0.000000e+00 831/836 (99%) EPI855174 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI840041 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI839900 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI839872 A/swine/Minnesota/A01567671/2015 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI839861 A/swine/Minnesota/A01567012/2014 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI839796 A/swine/Minnesota/A01567011/2014 (A/H1N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI855179 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI845544 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI839944 A/swine/Minnesota/A01567833/2015 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI838572 A/swine/Iowa/A01727251/2015 (A/H1N1) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI838567 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI816876 A/Minnesota/70/2016 (A/H1N2) segment 8 (NS) 1506.1 0.000000e+00 830/838 (99%) EPI845466 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI845418 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI816884 A/Wisconsin/71/2016 (A/H1N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI690494 A/swine/Wisconsin/A01104088/2015 (A/H1N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI845492 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI839997 A/swine/Oklahoma/A02076949/2015 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 830/839 (98%) EPI839933 A/swine/Oklahoma/A02025582/2015 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 830/839 (98%) EPI839889 A/swine/Oklahoma/A01770387/2015 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 830/839 (98%) EPI854897 A/swine/Oklahoma/A01432269/2012 (A/H1N2) segment 8 (NS) 1495.1 0.000000e+00 828/837 (98%) EPI663612 A/swine/Nebraska/A01509530/2014 (A/H1N2) segment 8 (NS) 1495.1 0.000000e+00 828/837 (98%) EPI653951 A/swine/Nebraska/A01493792/2014 (A/H3N2) segment 8 (NS) 1495.1 0.000000e+00 828/837 (98%) EPI647619 A/swine/Nebraska/A014792599/2014 (A/H1N2) segment 8 (NS) 1495.1 0.000000e+00 828/837 (98%) EPI839910 A/swine/Nebraska/A01476672/2014 (A/H1N2) segment 8 (NS) 1489.5 0.000000e+00 827/837 (98%) EPI550013 A/swine/Texas/13TOSU0049/2013 (A/H1N2) segment 8 (NS) 1489.5 0.000000e+00 827/837 (98%) EPI446821 A/swine/Kentucky/12TOSU1053/2012 (A/H1N2) segment 8 (NS) 1489.5 0.000000e+00 827/837 (98%) EPI838494 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI647610 A/swine/Oklahoma/A01049501/2011 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI641653 A/swine/Kansas/A01290646/2013 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI603672 A/swine/Iowa/A01076157/2010 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI589915 A/swine/Iowa/A01049643/2011 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI585706 A/swine/Illinois/A01049872/2011 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI528436 A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI446900 A/swine/Kentucky/12TOSU1155/2012 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 827/838 (98%) EPI446895 A/swine/Kentucky/12TOSU1054/2012 (A/H1N2) segment 8 (NS) 1484.0 0.000000e+00 826/837 (98%) EPI647603 A/swine/Oklahoma/A01202413/2011 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI589942 A/swine/Iowa/A01049645/2011 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI585702 A/swine/Illinois/A01049871/2011 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI558116 A/Minnesota/33/2014 (A/H1N1) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI528487 A/swine/Texas/13TOSU0050/2013 (A/H1N1) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI526950 A/swine/Ohio/13TOSU1373/2013 (A/H3N2) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI446854 A/swine/Kentucky/12TOSU1052/2012 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 826/838 (98%) EPI446813 A/swine/Kentucky/12TOSU1084/2012 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 826/838 (98%) EPI443488 A/swine/Iowa/A01328942/2012 (A/H1N2) segment 8 (NS) 1478.4 0.000000e+00 825/837 (98%) EPI839924 A/swine/Nebraska/A01476438/2014 (A/H1N2) segment 8 (NS) 1472.9 0.000000e+00 824/837 (98%) EPI615674 A/swine/Oklahoma/A01202414/2011 (A/H1N2) segment 8 (NS) 1472.9 0.000000e+00 824/837 (98%) EPI615452 A/swine/Oklahoma/A01202417/2011 (A/H1N2) segment 8 (NS) 1472.9 0.000000e+00 824/837 (98%) EPI838537 A/swine/Kansas/A01377649/2015 (A/H3N2) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI663428 A/swine/Kansas/A01477353/2014 (A/H3N2) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI663408 A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI647614 A/swine/Oklahoma/A01202415/2011 (A/H1N2) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI641736 A/swine/Oklahoma/A01410195/2014 (A/H1N1) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI446845 A/swine/Kentucky/12TOSU1098/2012 (A/H1N2) segment 8 (NS) 1467.4 0.000000e+00 825/839 (98%) EPI220863 A/swine/Oklahoma/020734-2/2008 (A/H1N2) segment 8 (NS) 1467.4 0.000000e+00 823/837 (98%) EPI654003 A/swine/Minnesota/A01509221/2014 (A/H0) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI492229 A/swine/Oklahoma/02083/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI492026 A/swine/Arkansas/02404/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI490718 A/swine/Oklahoma/02530/2009 (A/H3N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI488822 A/swine/Oklahoma/02056/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI488815 A/swine/Oklahoma/02107/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220928 A/swine/Texas/050593/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220911 A/swine/Oklahoma/053259/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220895 A/swine/Oklahoma/032726/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220871 A/swine/Oklahoma/020734-3/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220855 A/swine/Oklahoma/016179-9/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220839 A/swine/Oklahoma/011521-5/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220831 A/swine/Oklahoma/011521-4/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220823 A/swine/Oklahoma/011289-9/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220815 A/swine/Oklahoma/011289-8/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220807 A/swine/Oklahoma/011289-10/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220791 A/swine/Oklahoma/010710-8/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI220775 A/swine/Oklahoma/010226-16/2008 (A/H1N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI219372 A/swine/Oklahoma/001142/2009 (A/H3N2) segment 8 (NS) 1461.8 0.000000e+00 822/837 (98%) EPI840031 A/swine/South Dakota/A02025413/2015 (A/H1N2) segment 8 (NS) 1456.3 0.000000e+00 821/837 (98%) EPI490734 A/swine/Oklahoma/02985/2010 (A/H3N2) segment 8 (NS) 1456.3 0.000000e+00 821/837 (98%)
niman Posted December 1, 2016 Author Report Posted December 1, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864027 A/Iowa/32/2016 (A/H1N2) segment 4 (HA) 3122.0 0.000000e+00 1690/1690 (100%) EPI762010 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 4 (HA) 3083.2 0.000000e+00 1683/1690 (99%) EPI753589 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 4 (HA) 3083.2 0.000000e+00 1683/1690 (99%) EPI736626 A/swine/Illinois/A01730554/2016 (A/H0) segment 4 (HA) 3079.5 0.000000e+00 1682/1690 (99%) EPI703846 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI703826 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI687679 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI682726 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 4 (HA) 3077.6 0.000000e+00 1682/1690 (99%) EPI753592 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687682 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687676 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI687673 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 4 (HA) 3072.1 0.000000e+00 1681/1690 (99%) EPI762007 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 4 (HA) 3068.4 0.000000e+00 1680/1690 (99%) EPI672966 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 4 (HA) 3064.7 0.000000e+00 1679/1690 (99%) EPI682794 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 4 (HA) 3061.0 0.000000e+00 1679/1690 (99%) EPI703963 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 4 (HA) 3059.2 0.000000e+00 1678/1690 (99%) EPI672890 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 4 (HA) 3057.3 0.000000e+00 1678/1690 (99%) EPI762144 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 4 (HA) 3055.5 0.000000e+00 1678/1690 (99%) EPI672960 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 4 (HA) 3055.5 0.000000e+00 1677/1690 (99%) EPI760176 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 4 (HA) 3049.9 0.000000e+00 1677/1690 (99%) EPI711746 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 4 (HA) 3044.4 0.000000e+00 1676/1690 (99%) EPI678599 A/swine/Indiana/A01945405/2015 (A/H1N2) segment 4 (HA) 3044.4 0.000000e+00 1676/1690 (99%) EPI678415 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 4 (HA) 3040.7 0.000000e+00 1675/1690 (99%) EPI678321 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 4 (HA) 3038.9 0.000000e+00 1675/1690 (99%) EPI590668 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 4 (HA) 3027.8 0.000000e+00 1673/1690 (98%) EPI647507 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 4 (HA) 3022.2 0.000000e+00 1672/1690 (98%) EPI620645 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 4 (HA) 3022.2 0.000000e+00 1672/1690 (98%) EPI620704 A/swine/Illinois/A01470835/2015 (A/H1N2) segment 4 (HA) 3016.7 0.000000e+00 1671/1690 (98%) EPI590793 A/swine/Illinois/A01470861/2015 (A/H1N2) segment 4 (HA) 3016.7 0.000000e+00 1671/1690 (98%) EPI586157 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 4 (HA) 3013.0 0.000000e+00 1670/1690 (98%) EPI620608 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586145 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586133 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI586130 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI584814 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI584790 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 4 (HA) 3011.2 0.000000e+00 1670/1690 (98%) EPI620499 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI586068 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI586032 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI584793 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 4 (HA) 3007.5 0.000000e+00 1669/1690 (98%) EPI718308 A/swine/Illinois/A01729512/2016 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI682791 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI647622 A/swine/Michigan/A01104086/2015 (A/H0) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI647578 A/swine/Illinois/A02034785/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI641443 A/swine/Indiana/A02077934/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI623684 A/swine/Illinois/A01822445/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612717 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612547 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI612538 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586160 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586142 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI586014 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI584740 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 4 (HA) 3005.6 0.000000e+00 1669/1690 (98%) EPI669233 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI612580 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI586136 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 4 (HA) 3001.9 0.000000e+00 1668/1690 (98%) EPI704601 A/swine/Illinois/A01727702/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI687588 A/swine/Minnesota/A01941141/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI682700 A/swine/Iowa/A01944834/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI647528 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI641541 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI612723 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI612556 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI586118 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 4 (HA) 3000.1 0.000000e+00 1668/1690 (98%) EPI620508 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 4 (HA) 2998.2 0.000000e+00 1667/1690 (98%) EPI586148 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 4 (HA) 2996.4 0.000000e+00 1667/1690 (98%) EPI586035 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 4 (HA) 2996.4 0.000000e+00 1666/1690 (98%) EPI760246 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI704956 A/swine/Indiana/A01727661/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI703930 A/swine/Illinois/A01896114/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI703918 A/swine/Illinois/A01797679/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI687661 A/swine/Illinois/A01797392/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI685642 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI682788 A/swine/Illinois/A01749186/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI678641 A/swine/Iowa/A01795376/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI678608 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI669218 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1667/1690 (98%) EPI621370 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1668/1691 (98%) EPI620540 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 4 (HA) 2994.5 0.000000e+00 1666/1690 (98%) EPI678287 A/swine/Iowa/A01945639/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1666/1690 (98%) EPI672878 A/swine/Illinois/A01945130/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1667/1691 (98%) EPI641532 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 4 (HA) 2990.8 0.000000e+00 1667/1691 (98%) EPI737399 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1667/1691 (98%) EPI736620 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704923 A/swine/Illinois/A01796671/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704883 A/swine/Iowa/A01941556/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI704819 A/swine/Illinois/A01749578/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI703849 A/swine/Illinois/A01797468/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI687670 A/swine/Illinois/A01749362/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI687652 A/swine/Iowa/A01797314/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI682756 A/swine/Iowa/A01945940/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI678278 A/swine/Iowa/A01795438/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653056 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653035 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653021 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI653014 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI645050 A/swine/Illinois/A02090176/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1667/1691 (98%) EPI612535 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 4 (HA) 2989.0 0.000000e+00 1666/1690 (98%) EPI682744 A/swine/Illinois/A01944886/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI620614 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI612517 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI558862 A/swine/Iowa/A01477772/2014 (A/H1N2) segment 4 (HA) 2985.3 0.000000e+00 1665/1690 (98%) EPI711724 A/swine/Illinois/A01729323/2016 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI704947 A/swine/Illinois/A01727266/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI703972 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI703966 A/swine/Indiana/A01797714/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI703789 A/swine/Iowa/A01796353/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI687658 A/swine/Illinois/A01795970/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI687621 A/swine/Illinois/A01797385/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI678658 A/swine/Illinois/A01945555/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI671810 A/swine/Indiana/A02025965/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI641535 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI641458 A/swine/Minnesota/A01847917/2015 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI573738 A/swine/Indiana/A01260735/2014 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI545879 A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI545776 A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 4 (HA) 2983.5 0.000000e+00 1665/1690 (98%) EPI685634 A/swine/Iowa/A02025166/2015 (A/H1N2) segment 4 (HA) 2981.6 0.000000e+00 1663/1690 (98%) EPI704920 A/swine/Illinois/A01727590/2015 (A/H1N2) segment 4 (HA) 2979.8 0.000000e+00 1664/1690 (98%) EPI678297 A/swine/Indiana/A01945739/2015 (A/H1N2) segment 4 (HA) 2979.8 0.000000e+00 1663/1690 (98%) EPI586121 A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 4 (HA) 2979.8 0.000000e+00 1663/1690 (98%) EPI845477 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI778170 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI764465 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI760167 A/swine/Iowa/A01733501/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI753598 A/swine/Oklahoma/A01733480/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI750297 A/swine/Iowa/A01732130/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI736838 A/swine/Illinois/A01729946/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI736817 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1665/1691 (98%) EPI703893 A/swine/Oklahoma/A01798161/2015 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI689984 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI682832 A/swine/Iowa/A01795851/2015 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1664/1690 (98%) EPI678437 A/swine/Iowa/A01944800/2015 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1665/1691 (98%) EPI542566 A/swine/South Dakota/A01482581/2014 (A/H1N2) segment 4 (HA) 2977.9 0.000000e+00 1665/1691 (98%) EPI678587 A/swine/Illinois/A01945208/2015 (A/H1N2) segment 4 (HA) 2976.1 0.000000e+00 1663/1690 (98%) EPI612514 A/swine/Ohio/A02077256/2015 (A/H1N2) segment 4 (HA) 2974.2 0.000000e+00 1663/1691 (98%) EPI816890 A/Wisconsin/71/2016 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1664/1691 (98%) EPI764923 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI753755 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI750303 A/swine/Iowa/A01732316/2016 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI704917 A/swine/Illinois/A01727363/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI704698 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI704611 A/swine/Indiana/A01727837/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI691597 A/swine/Iowa/A01746958/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI678661 A/swine/Oklahoma/A01944545/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI678424 A/swine/Oklahoma/A01857957/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI678271 A/swine/Indiana/A01945744/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1664/1691 (98%) EPI597688 A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI586092 A/swine/Minnesota/A01489541/2015 (A/H1N2) segment 4 (HA) 2972.4 0.000000e+00 1663/1690 (98%) EPI736629 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 4 (HA) 2970.5 0.000000e+00 1662/1690 (98%) EPI718293 A/swine/Illinois/A01729531/2016 (A/H1N2) segment 4 (HA) 2968.7 0.000000e+00 1662/1690 (98%) EPI678557 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 4 (HA) 2968.7 0.000000e+00 1663/1691 (98%) EPI760182 A/swine/Illinois/A01733968/2016 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI753610 A/swine/Oklahoma/A01733331/2016 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1663/1691 (98%) EPI737402 A/swine/Illinois/A01731670/2016 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI718314 A/swine/Oklahoma/A01729483/2016 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1663/1691 (98%) EPI704707 A/swine/Iowa/A01727834/2015 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI685654 A/swine/Iowa/A02025170/2015 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI623694 A/swine/Indiana/A01260875/2015 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI600300 A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI558898 A/swine/Iowa/A01566473/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1663/1691 (98%) EPI542450 A/swine/Minnesota/A01477086/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI538661 A/swine/Minnesota/A01501642/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI538658 A/swine/Minnesota/A01501639/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI538655 A/swine/Minnesota/A01501690/2014 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI502679 A/swine/Illinois/A01409364/2013 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI501532 A/swine/Minnesota/A01395189/2013 (A/H1N2) segment 4 (HA) 2966.8 0.000000e+00 1662/1690 (98%) EPI762036 A/swine/Indiana/A01732805/2016 (A/H1N2) segment 4 (HA) 2965.0 0.000000e+00 1661/1690 (98%) EPI641834 A/swine/Illinois/A02034146/2015 (A/H1N2) segment 4 (HA) 2965.0 0.000000e+00 1661/1690 (98%) EPI764528 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 4 (HA) 2963.1 0.000000e+00 1661/1690 (98%) EPI764450 A/swine/Illinois/A01894756/2016 (A/H1N2) segment 4 (HA) 2963.1 0.000000e+00 1661/1690 (98%) EPI615105 A/swine/Kansas/A01377559/2015 (A/H1N2) segment 4 (HA) 2963.1 0.000000e+00 1653/1679 (98%) EPI600309 A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 4 (HA) 2963.1 0.000000e+00 1661/1690 (98%) EPI837158 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 4 (HA) 2961.3 0.000000e+00 1662/1691 (98%) EPI761971 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 4 (HA) 2961.3 0.000000e+00 1661/1690 (98%) EPI711758 A/swine/Oklahoma/A01729409/2016 (A/H1N2) segment 4 (HA) 2961.3 0.000000e+00 1661/1690 (98%) EPI590496 A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 4 (HA) 2961.3 0.000000e+00 1661/1690 (98%) EPI573338 A/swine/Minnesota/A01567012/2014 (A/H1N2) segment 4 (HA) 2961.3 0.000000e+00 1661/1690 (98%) EPI704710 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 4 (HA) 2957.6 0.000000e+00 1660/1690 (98%) EPI703975 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 4 (HA) 2957.6 0.000000e+00 1660/1690 (98%) EPI753616 A/swine/Iowa/A01733287/2016 (A/H1N2) segment 4 (HA) 2955.8 0.000000e+00 1660/1690 (98%) EPI641617 A/swine/Illinois/A02024907/2015 (A/H1N2) segment 4 (HA) 2952.1 0.000000e+00 1659/1690 (98%) EPI764474 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 4 (HA) 2950.2 0.000000e+00 1657/1690 (98%) EPI573411 A/swine/Minnesota/A01567268/2014 (A/H1N2) segment 4 (HA) 2950.2 0.000000e+00 1659/1690 (98%) EPI545849 A/swine/Minnesota/A01476406/2014 (A/H1N2) segment 4 (HA) 2950.2 0.000000e+00 1659/1690 (98%) EPI531091 A/swine/Minnesota/A01493740/2014 (A/H1N2) segment 4 (HA) 2950.2 0.000000e+00 1659/1690 (98%) EPI597691 A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 4 (HA) 2946.5 0.000000e+00 1659/1691 (98%) EPI704968 A/swine/Iowa/A01796404/2015 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1659/1691 (98%) EPI593663 A/swine/Minnesota/A01567833/2015 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1658/1690 (98%) EPI573727 A/swine/Minnesota/A01567671/2015 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1658/1690 (98%) EPI573611 A/swine/Minnesota/A01567379/2014 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1658/1690 (98%) EPI573344 A/swine/Minnesota/A01567011/2014 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1658/1690 (98%) EPI426904 A/swine/Oklahoma/A01432285/2013 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1660/1692 (98%) EPI426884 A/swine/Oklahoma/A01432269/2012 (A/H1N2) segment 4 (HA) 2944.7 0.000000e+00 1660/1692 (98%) EPI838550 A/swine/Indiana/A01778290/2016 (A/H1N2) segment 4 (HA) 2939.1 0.000000e+00 1658/1691 (98%) EPI663392 A/swine/Oklahoma/A01770387/2015 (A/H1N2) segment 4 (HA) 2939.1 0.000000e+00 1657/1690 (98%) EPI623635 A/swine/Iowa/A02077681/2015 (A/H1N2) segment 4 (HA) 2935.4 0.000000e+00 1656/1690 (97%) EPI612732 A/swine/Minnesota/A01847714/2015 (A/H1N2) segment 4 (HA) 2933.6 0.000000e+00 1656/1690 (97%) EPI597682 A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 4 (HA) 2933.6 0.000000e+00 1657/1691 (97%) EPI446901 A/swine/Kentucky/12TOSU1155/2012 (A/H1N2) segment 4 (HA) 2933.6 0.000000e+00 1659/1693 (97%) EPI446855 A/swine/Kentucky/12TOSU1052/2012 (A/H1N2) segment 4 (HA) 2933.6 0.000000e+00 1660/1694 (97%) EPI446814 A/swine/Kentucky/12TOSU1084/2012 (A/H1N2) segment 4 (HA) 2933.6 0.000000e+00 1660/1694 (97%) EPI711735 A/swine/Minnesota/A01941555/2015 (A/H1N2) segment 4 (HA) 2929.9 0.000000e+00 1656/1691 (97%) EPI685622 A/swine/Iowa/A01823446/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI663383 A/swine/Oklahoma/A02076949/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI663358 A/swine/Oklahoma/A02025582/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI641420 A/swine/Minnesota/A01822758/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI620799 A/swine/Minnesota/A01847466/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI612480 A/swine/Minnesota/A01847704/2015 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1655/1690 (97%) EPI550009 A/swine/Texas/13TOSU0049/2013 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1658/1693 (97%) EPI446896 A/swine/Kentucky/12TOSU1054/2012 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1659/1694 (97%) EPI446846 A/swine/Kentucky/12TOSU1098/2012 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1659/1694 (97%) EPI446822 A/swine/Kentucky/12TOSU1053/2012 (A/H1N2) segment 4 (HA) 2928.1 0.000000e+00 1659/1694 (97%) EPI711703 A/swine/Minnesota/A01941666/2015 (A/H1N2) segment 4 (HA) 2922.5 0.000000e+00 1654/1690 (97%) EPI641417 A/swine/Iowa/A01822769/2015 (A/H1N2) segment 4 (HA) 2922.5 0.000000e+00 1654/1690 (97%) EPI508899 A/swine/Minnesota/A01410131/2014 (A/H1N2) segment 4 (HA) 2920.7 0.000000e+00 1652/1690 (97%) EPI816882 A/Minnesota/70/2016 (A/H1N2) segment 4 (HA) 2917.0 0.000000e+00 1654/1691 (97%) EPI703816 A/swine/Minnesota/A01941104/2015 (A/H1N2) segment 4 (HA) 2917.0 0.000000e+00 1653/1690 (97%) EPI685631 A/swine/Iowa/A01823426/2015 (A/H1N2) segment 4 (HA) 2917.0 0.000000e+00 1653/1690 (97%) EPI685628 A/swine/Iowa/A01823437/2015 (A/H1N2) segment 4 (HA) 2917.0 0.000000e+00 1653/1690 (97%) EPI682776 A/swine/Iowa/A01940974/2015 (A/H1N2) segment 4 (HA) 2917.0 0.000000e+00 1653/1690 (97%) EPI704926 A/swine/Oklahoma/A01727569/2015 (A/H1N2) segment 4 (HA) 2913.3 0.000000e+00 1652/1690 (97%) EPI653995 A/swine/Minnesota/A01823870/2015 (A/H1N2) segment 4 (HA) 2911.4 0.000000e+00 1653/1691 (97%) EPI682775 A/swine/Nebraska/A01940285/2015 (A/H1N2) segment 4 (HA) 2905.9 0.000000e+00 1652/1691 (97%) EPI678504 A/swine/Minnesota/A01940683/2015 (A/H1N2) segment 4 (HA) 2900.4 0.000000e+00 1650/1690 (97%) EPI499954 A/swine/Minnesota/A01365714/2013 (A/H1N2) segment 4 (HA) 2894.8 0.000000e+00 1650/1691 (97%) EPI439883 A/swine/Minnesota/A01445352/2013 (A/H1N2) segment 4 (HA) 2894.8 0.000000e+00 1651/1692 (97%) EPI438220 A/swine/Nebraska/A01445134/2013 (A/H1N2) segment 4 (HA) 2894.8 0.000000e+00 1650/1691 (97%) EPI438214 A/swine/Nebraska/A01445164/2013 (A/H1N2) segment 4 (HA) 2894.8 0.000000e+00 1650/1691 (97%) EPI546776 A/swine/South Dakota/A01482449/2014 (A/H1N2) segment 4 (HA) 2889.3 0.000000e+00 1649/1691 (97%) EPI546773 A/swine/South Dakota/A01482388/2014 (A/H1N2) segment 4 (HA) 2889.3 0.000000e+00 1649/1691 (97%) EPI441669 A/swine/Iowa/A01432535/2013 (A/H1N2) segment 4 (HA) 2889.3 0.000000e+00 1649/1691 (97%) EPI440790 A/swine/Nebraska/A01349084/2013 (A/H1N2) segment 4 (HA) 2889.3 0.000000e+00 1649/1691 (97%) EPI704876 A/swine/Kansas/A01941553/2015 (A/H1N2) segment 4 (HA) 2883.7 0.000000e+00 1647/1690 (97%) EPI504931 A/swine/Minnesota/A01366485/2013 (A/H1N2) segment 4 (HA) 2883.7 0.000000e+00 1649/1692 (97%) EPI464486 A/swine/Nebraska/A01351017/2013 (A/H1N2) segment 4 (HA) 2883.7 0.000000e+00 1648/1691 (97%) EPI459445 A/swine/Nebraska/A01350362/2013 (A/H1N2) segment 4 (HA) 2883.7 0.000000e+00 1648/1691 (97%) EPI461017 A/swine/South Dakota/A01350819/2013 (A/H1N2) segment 4 (HA) 2878.2 0.000000e+00 1647/1691 (97%) EPI461002 A/swine/South Dakota/A01350778/2013 (A/H1N2) segment 4 (HA) 2878.2 0.000000e+00 1648/1692 (97%) EPI460999 A/swine/South Dakota/A01350758/2013 (A/H1N2) segment 4 (HA) 2878.2 0.000000e+00 1648/1692 (97%) EPI600379 A/swine/Iowa/A01476931/2014 (A/H1N2) segment 4 (HA) 2872.7 0.000000e+00 1646/1691 (97%) EPI499711 A/swine/Minnesota/A01290679/2013 (A/H1N2) segment 4 (HA) 2872.7 0.000000e+00 1647/1692 (97%) EPI492372 A/swine/Minnesota/A01392045/2013 (A/H1N2) segment 4 (HA) 2872.7 0.000000e+00 1647/1692 (97%) EPI487030 A/swine/South Dakota/A01365260/2013 (A/H1N2) segment 4 (HA) 2872.7 0.000000e+00 1646/1691 (97%) EPI672993 A/swine/Minnesota/A01940684/2014 (A/H1N2) segment 4 (HA) 2861.6 0.000000e+00 1644/1691 (97%) EPI586071 A/swine/Iowa/A01840794/2015 (A/H1N2) segment 4 (HA) 2861.6 0.000000e+00 1644/1691 (97%) EPI736870 A/swine/Nebraska/A01730138/2016 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1643/1691 (97%) EPI647593 A/swine/Iowa/A02025399/2015 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1643/1691 (97%) EPI559575 A/swine/Nebraska/A01476672/2014 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1644/1692 (97%) EPI532354 A/swine/Nebraska/A01509623/2014 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1644/1692 (97%) EPI532351 A/swine/Nebraska/AA01509545/2014 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1644/1692 (97%) EPI531623 A/swine/Nebraska/A01509439/2014 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1644/1692 (97%) EPI460996 A/swine/South Dakota/A01350648/2013 (A/H1N2) segment 4 (HA) 2856.0 0.000000e+00 1644/1692 (97%) EPI672875 A/swine/Iowa/A01795080/2015 (A/H1N2) segment 4 (HA) 2852.3 0.000000e+00 1642/1691 (97%) EPI559210 A/swine/Nebraska/A01483354/2014 (A/H1N2) segment 4 (HA) 2850.5 0.000000e+00 1643/1692 (97%) EPI532360 A/swine/Nebraska/A0A01509530/2014 (A/H1N2) segment 4 (HA) 2850.5 0.000000e+00 1643/1692 (97%) EPI501529 A/swine/Minnesota/A01395108/2013 (A/H1N2) segment 4 (HA) 2850.5 0.000000e+00 1643/1692 (97%) EPI703875 A/swine/Iowa/A01896070/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1643/1693 (97%) EPI682847 A/swine/Iowa/A01797178/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1643/1693 (97%) EPI682732 A/swine/North Carolina/A01797007/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1643/1693 (97%) EPI641817 A/swine/Nebraska/A02035254/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI620790 A/swine/Nebraska/A01847192/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI620787 A/swine/Nebraska/A01847279/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI620784 A/swine/Nebraska/AA01847227/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI620642 A/swine/Nebraska/A01554747/2015 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI600327 A/swine/Oklahoma/A01566774/2014 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1643/1693 (97%) EPI559691 A/swine/Nebraska/A01483531/2014 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI530332 A/swine/Nebraska/A01493629/2014 (A/H1N2) segment 4 (HA) 2845.0 0.000000e+00 1642/1692 (97%) EPI678602 A/swine/Iowa/A01857704/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1640/1691 (96%) EPI641843 A/swine/Iowa/A02035112/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1640/1691 (96%) EPI623681 A/swine/Nebraska/A01822081/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1641/1692 (96%) EPI620475 A/swine/Nebraska/A01847969/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1641/1692 (96%) EPI612489 A/swine/Nebraska/A01847285/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1641/1692 (96%) EPI590656 A/swine/Iowa/A01554310/2015 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1640/1691 (96%) EPI584882 A/swine/Illinois/A01489872/2014 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1641/1692 (96%) EPI573415 A/swine/Oklahoma/A01567187/2014 (A/H1N2) segment 4 (HA) 2839.4 0.000000e+00 1642/1693 (96%) EPI703774 A/swine/Iowa/A01798118/2015 (A/H1N2) segment 4 (HA) 2833.9 0.000000e+00 1639/1691 (96%) EPI703765 A/swine/Iowa/A01798119/2015 (A/H1N2) segment 4 (HA) 2833.9 0.000000e+00 1639/1691 (96%) EPI559213 A/swine/Minnesota/A01483483/2014 (A/H1N2) segment 4 (HA) 2833.9 0.000000e+00 1641/1693 (96%) EPI391402 A/swine/Iowa/A01203153/2012 (A/H1N2) segment 4 (HA) 2833.9 0.000000e+00 1640/1692 (96%) EPI838552 A/swine/Iowa/A01778372/2016 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1638/1691 (96%) EPI709862 A/swine/Oklahoma/A01728221/2015 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1639/1692 (96%) EPI709850 A/swine/Oklahoma/A01728619/2015 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1639/1692 (96%) EPI709829 A/swine/Oklahoma/A01728097/2015 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1639/1692 (96%) EPI682805 A/swine/Iowa/A01857985/2015 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1639/1692 (96%) EPI623644 A/swine/Iowa/A02024228/2015 (A/H1N2) segment 4 (HA) 2828.3 0.000000e+00 1638/1691 (96%) EPI678566 A/swine/Iowa/A01857653/2015 (A/H0) segment 4 (HA) 2824.6 0.000000e+00 1638/1692 (96%) EPI736873 A/swine/Oklahoma/A01730089/2016 (A/H1N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1692 (96%) EPI573413 A/swine/Oklahoma/A01567181/2014 (A/H1N2) segment 4 (HA) 2822.8 0.000000e+00 1639/1693 (96%) EPI391163 A/swine/Iowa/A01202742/2011 (A/H1N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1692 (96%) EPI391158 A/swine/Iowa/A01202743/2011 (A/H1N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1692 (96%) EPI641620 A/swine/Iowa/A02035127/2015 (A/H1N2) segment 4 (HA) 2819.1 0.000000e+00 1637/1692 (96%) EPI764453 A/swine/Nebraska/A01894513/2016 (A/H1N2) segment 4 (HA) 2817.3 0.000000e+00 1635/1691 (96%) EPI736811 A/swine/Oklahoma/A01730092/2016 (A/H1N2) segment 4 (HA) 2817.3 0.000000e+00 1637/1692 (96%) EPI689459 A/swine/South Dakota/A01747107/2015 (A/H1N2) segment 4 (HA) 2817.3 0.000000e+00 1638/1693 (96%) EPI590751 A/swine/Nebraska/A01489958/2015 (A/H1N2) segment 4 (HA) 2817.3 0.000000e+00 1638/1693 (96%) EPI679870 A/swine/South Dakota/A01746932/2015 (A/H1N2) segment 4 (HA) 2811.7 0.000000e+00 1637/1693 (96%) EPI653102 A/swine/Iowa/A01472992/2015 (A/H1N2) segment 4 (HA) 2811.7 0.000000e+00 1637/1693 (96%) EPI612483 A/swine/Nebraska/A01847566/2015 (A/H1N2) segment 4 (HA) 2811.7 0.000000e+00 1636/1692 (96%) EPI573732 A/swine/Minnesota/A01567631/2015 (A/H1N2) segment 4 (HA) 2811.7 0.000000e+00 1636/1692 (96%) EPI704974 A/swine/Oklahoma/A01727653/2015 (A/H1N2) segment 4 (HA) 2808.0 0.000000e+00 1635/1692 (96%) EPI711752 A/swine/Iowa/A01729399/2016 (A/H1N2) segment 4 (HA) 2806.2 0.000000e+00 1636/1693 (96%) EPI559569 A/swine/Iowa/A01476715/2014 (A/H1N2) segment 4 (HA) 2806.2 0.000000e+00 1635/1692 (96%) EPI573023 A/swine/Colorado/A01555119/2014 (A/H1N1) segment 4 (HA) 2802.5 0.000000e+00 1634/1693 (96%) EPI736808 A/swine/Iowa/A01730123/2016 (A/H1N2) segment 4 (HA) 2784.0 0.000000e+00 1632/1693 (96%) EPI704704 A/swine/Nebraska/A01727959/2015 (A/H1N2) segment 4 (HA) 2784.0 0.000000e+00 1631/1692 (96%) EPI448832 A/swine/Kansas/13-105721b/2013 (A/H1N2) segment 4 (HA) 2784.0 0.000000e+00 1631/1692 (96%) EPI383760 A/swine/Iowa/A01203538/2012 (A/H1N2) segment 4 (HA) 2784.0 0.000000e+00 1632/1693 (96%) EPI653998 A/swine/Minnesota/A01823864/2015 (A/H1N2) segment 4 (HA) 2778.5 0.000000e+00 1630/1692 (96%) EPI678268 A/swine/Minnesota/A01940819/2015 (A/H1N2) segment 4 (HA) 2772.9 0.000000e+00 1629/1692 (96%) EPI469546 A/swine/Kansas/13-118657/2013 (A/H1N2) segment 4 (HA) 2767.4 0.000000e+00 1628/1692 (96%) EPI391187 A/swine/Iowa/A01202786/2011 (A/H1N2) segment 4 (HA) 2767.4 0.000000e+00 1629/1693 (96%) EPI259432 A/swine/Iowa/02998/2010 (A/H1N2) segment 4 (HA) 2767.4 0.000000e+00 1628/1692 (96%) EPI612510 A/swine/Iowa/A02076444/2015 (A/H0) segment 4 (HA) 2761.9 0.000000e+00 1628/1693 (96%) EPI327054 A/swine/Minnesota/8721-1/2010 (A/H1N2) segment 4 (HA) 2761.9 0.000000e+00 1628/1693 (96%) EPI711685 A/swine/Minnesota/A01941579/2015 (A/H1N2) segment 4 (HA) 2756.3 0.000000e+00 1626/1692 (96%) EPI687595 A/swine/Minnesota/A01941249/2015 (A/H1N2) segment 4 (HA) 2756.3 0.000000e+00 1626/1692 (96%) EPI682785 A/swine/Iowa/A01747221/2015 (A/H1N2) segment 4 (HA) 2756.3 0.000000e+00 1627/1693 (96%) EPI383763 A/swine/Iowa/A01203566/2012 (A/H1N2) segment 4 (HA) 2756.3 0.000000e+00 1628/1694 (96%) EPI448829 A/swine/Kansas/12-164540/2012 (A/H1N2) segment 4 (HA) 2750.8 0.000000e+00 1625/1692 (96%) EPI371289 A/swine/Minnesota/A01134357/2011 (A/H1N2) segment 4 (HA) 2750.8 0.000000e+00 1625/1692 (96%) EPI391021 A/swine/Iowa/A01202455/2011 (A/H1N2) segment 4 (HA) 2745.2 0.000000e+00 1624/1692 (95%) EPI371276 A/swine/Minnesota/A01076210/2010 (A/H1N2) segment 4 (HA) 2745.2 0.000000e+00 1624/1692 (95%) EPI371274 A/swine/Minnesota/A01076205/2010 (A/H1N2) segment 4 (HA) 2745.2 0.000000e+00 1624/1692 (95%) EPI234590 A/swine/SD/31813/2009 (A/H1N2) segment 4 (HA) 2745.2 0.000000e+00 1624/1692 (95%) EPI531482 A/swine/Kansas/A01377256/2014 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1624/1693 (95%) EPI499978 A/swine/Nebraska/A01104071/2013 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1623/1692 (95%) EPI493009 A/swine/Kansas/A01377088/2013 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1624/1693 (95%) EPI390932 A/swine/Iowa/A01049661/2011 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1624/1693 (95%) EPI390915 A/swine/Iowa/A01049000/2010 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1623/1692 (95%) EPI337473 A/swine/Minnesota/SG1133/2008 (A/H1N2) segment 4 (HA) 2739.7 0.000000e+00 1623/1692 (95%) EPI371280 A/swine/Minnesota/A01076764/2010 (A/H1N2) segment 4 (HA) 2734.2 0.000000e+00 1622/1692 (95%) EPI371279 A/swine/Minnesota/A01076763/2010 (A/H1N2) segment 4 (HA) 2734.2 0.000000e+00 1622/1692 (95%) EPI502697 A/swine/Iowa/A01290859/2013 (A/H0) segment 4 (HA) 2728.6 0.000000e+00 1621/1692 (95%) EPI391037 A/swine/Iowa/A01202612/2011 (A/H1N2) segment 4 (HA) 2728.6 0.000000e+00 1621/1692 (95%) EPI390919 A/swine/Iowa/A01049263/2010 (A/H1N2) segment 4 (HA) 2728.6 0.000000e+00 1621/1692 (95%) EPI337505 A/swine/Minnesota/02324/2008 (A/H1N2) segment 4 (HA) 2728.6 0.000000e+00 1621/1692 (95%) EPI499970 A/swine/Nebraska/A01104068/2013 (A/H1N2) segment 4 (HA) 2723.1 0.000000e+00 1620/1692 (95%) EPI399605 A/swine/Minnesota/A01076183/2009 (A/H1N2) segment 4 (HA) 2723.1 0.000000e+00 1620/1692 (95%) EPI371288 A/swine/Minnesota/A01134353/2011 (A/H1N2) segment 4 (HA) 2723.1 0.000000e+00 1621/1693 (95%) EPI531672 A/swine/Kansas/A01377287/2014 (A/H1N2) segment 4 (HA) 2717.5 0.000000e+00 1619/1692 (95%) EPI488818 A/swine/Oklahoma/02056/2008 (A/H1N2) segment 4 (HA) 2717.5 0.000000e+00 1619/1692 (95%) EPI220771 A/swine/Oklahoma/010226-16/2008 (A/H1N2) segment 4 (HA) 2717.5 0.000000e+00 1619/1692 (95%) EPI542462 A/swine/Iowa/A01476215/2014 (A/H1N2) segment 4 (HA) 2712.0 0.000000e+00 1619/1693 (95%) EPI371658 A/swine/Minnesota/A01134341/2010 (A/H1N2) segment 4 (HA) 2712.0 0.000000e+00 1618/1692 (95%) EPI492225 A/swine/Oklahoma/02083/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI488811 A/swine/Oklahoma/02107/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220899 A/swine/Oklahoma/042169/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1616/1691 (95%) EPI220875 A/swine/Oklahoma/020736-1/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220859 A/swine/Oklahoma/020734-2/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220843 A/swine/Oklahoma/016179-8/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220827 A/swine/Oklahoma/011521-4/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220811 A/swine/Oklahoma/011289-8/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220803 A/swine/Oklahoma/011289-10/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220787 A/swine/Oklahoma/010710-8/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI220779 A/swine/Oklahoma/010226-17/2008 (A/H1N2) segment 4 (HA) 2706.5 0.000000e+00 1617/1692 (95%) EPI371281 A/swine/Minnesota/A01076998/2010 (A/H1N2) segment 4 (HA) 2700.9 0.000000e+00 1616/1692 (95%) EPI220867 A/swine/Oklahoma/020734-3/2008 (A/H1N2) segment 4 (HA) 2700.9 0.000000e+00 1616/1692 (95%) EPI220835 A/swine/Oklahoma/011521-5/2008 (A/H1N2) segment 4 (HA) 2700.9 0.000000e+00 1616/1692 (95%) EPI220819 A/swine/Oklahoma/011289-9/2008 (A/H1N2) segment 4 (HA) 2700.9 0.000000e+00 1616/1692 (95%) EPI220795 A/swine/Oklahoma/010710-9/2008 (A/H1N2) segment 4 (HA) 2700.9 0.000000e+00 1616/1692 (95%) EPI391406 A/swine/Iowa/A01203195/2012 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1615/1692 (95%) EPI371283 A/swine/Minnesota/A01116285/2011 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1616/1693 (95%) EPI327056 A/swine/Oklahoma/1701-1/2010 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1614/1691 (95%) EPI220932 A/swine/Texas/050625/2008 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1614/1691 (95%) EPI220891 A/swine/Oklahoma/032726/2008 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1615/1692 (95%) EPI220883 A/swine/Oklahoma/020736-2/2008 (A/H1N2) segment 4 (HA) 2695.4 0.000000e+00 1615/1692 (95%) EPI610096 A/swine/Minnesota/D09-21052-3/2009 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1615/1693 (95%) EPI492022 A/swine/Arkansas/02404/2008 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1614/1692 (95%) EPI391410 A/swine/Iowa/A01203194/2012 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1614/1692 (95%) EPI391033 A/swine/Iowa/A01202581/2011 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1614/1692 (95%) EPI371273 A/swine/Minnesota/A01047913/2010 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1614/1692 (95%) EPI327057 A/swine/Minnesota/7501-1/2010 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1615/1693 (95%) EPI281272 A/swine/Iowa/02039/2008 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1617/1695 (95%) EPI220851 A/swine/Oklahoma/016179-9/2008 (A/H1N2) segment 4 (HA) 2689.8 0.000000e+00 1614/1692 (95%) EPI615465 A/swine/Minnesota/D09-28266-4/2009 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1614/1693 (95%) EPI491841 A/swine/Minnesota/02852/2009 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1614/1693 (95%) EPI490570 A/swine/Oklahoma/02722/2009 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1613/1692 (95%) EPI327060 A/swine/Minnesota/5470-1/2010 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1614/1693 (95%) EPI220924 A/swine/Texas/050593/2008 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1613/1692 (95%) EPI220907 A/swine/Oklahoma/053259/2008 (A/H1N2) segment 4 (HA) 2684.3 0.000000e+00 1613/1692 (95%) EPI382632 A/swine/Minnesota/0745/2010 (A/H1N2) segment 4 (HA) 2678.8 0.000000e+00 1613/1693 (95%) EPI327059 A/swine/Minnesota/6470-1/2010 (A/H1N2) segment 4 (HA) 2678.8 0.000000e+00 1613/1693 (95%) EPI610175 A/swine/Minnesota/D09-24160-1/2009 (A/H1N1) segment 4 (HA) 2673.2 0.000000e+00 1611/1692 (95%) EPI610002 A/swine/Minnesota/D09-28266-2/2009 (A/H1N2) segment 4 (HA) 2673.2 0.000000e+00 1612/1693 (95%) EPI292299 A/swine/Oklahoma/44837-5/2010 (A/H1N2) segment 4 (HA) 2673.2 0.000000e+00 1611/1692 (95%) EPI269541 A/swine/Minnesota/03023/2010 (A/H1N2) segment 4 (HA) 2673.2 0.000000e+00 1610/1691 (95%) EPI371290 A/swine/Minnesota/A01134528/2010 (A/H1N2) segment 4 (HA) 2667.7 0.000000e+00 1612/1694 (95%) EPI390714 A/swine/Minnesota/A01076197/2010 (A/H1N2) segment 4 (HA) 2662.1 0.000000e+00 1608/1691 (95%) EPI383451 A/swine/Illinois/A01076121/2010 (A/H1N2) segment 4 (HA) 2662.1 0.000000e+00 1608/1691 (95%) EPI391009 A/swine/Iowa/A01202411/2011 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1611/1695 (95%) EPI390935 A/swine/Ohio/A01049357/2010 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI390925 A/swine/Ohio/A01049382/2011 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI383452 A/swine/Minnesota/A01076123/2010 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI383450 A/swine/Minnesota/A01076122/2010 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI369100 A/swine/Illinois/A01134482/2011 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI338554 A/swine/Iowa/A01049846/2011 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1610/1694 (95%) EPI327081 A/swine/Minnesota/0913-1/2009 (A/H1N2) segment 4 (HA) 2656.6 0.000000e+00 1609/1693 (95%) EPI653126 A/swine/Iowa/A01049726/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI615606 A/swine/Illinois/A01047046/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI615555 A/swine/Illinois/A01047045/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI390920 A/swine/Iowa/A01049344/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI384335 A/swine/Minnesota/A01116364/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI371269 A/swine/Iowa/A01076157/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1606/1691 (94%) EPI369199 A/swine/Illinois/A01076221/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1606/1691 (94%) EPI369088 A/swine/Illinois/A01076223/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1606/1691 (94%) EPI368324 A/swine/Illinois/A01047806/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI368323 A/swine/Illinois/A01047805/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI368322 A/swine/Illinois/A01047779/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI368321 A/swine/Illinois/A01047525/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367669 A/swine/Illinois/A01047518/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367656 A/swine/Illinois/A01047112/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367655 A/swine/Illinois/A01047108/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367654 A/swine/Illinois/A01047099/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367652 A/swine/Illinois/A01047089/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367651 A/swine/Illinois/A01047085/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367648 A/swine/Illinois/A01047042/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367647 A/swine/Illinois/A01047041/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367646 A/swine/Illinois/A01047024/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI367645 A/swine/Illinois/A01047020/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI353703 A/swine/Iowa/A01049858/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI347196 A/swine/Ohio/FAH10-1/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1610/1695 (94%) EPI338422 A/swine/Nebraska/A01049648/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1608/1693 (94%) EPI338417 A/swine/Iowa/A01049722/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI338416 A/swine/Iowa/A01049723/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI338415 A/swine/Iowa/A01049724/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI338414 A/swine/Iowa/A01049728/2011 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1609/1694 (94%) EPI327052 A/swine/Minnesota/1251-1/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1608/1693 (94%) EPI312697 A/swine/Minnesota/239106/2010 (A/H1N2) segment 4 (HA) 2651.1 0.000000e+00 1608/1693 (94%) EPI615638 A/swine/Illinois/A01047044/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI493663 A/swine/Iowa/13C097/2013 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1607/1693 (94%) EPI493647 A/swine/Iowa/13C098/2013 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1607/1693 (94%) EPI493639 A/swine/Iowa/13C096/2013 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1607/1693 (94%) EPI490777 A/swine/Arkansas/SG1382/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI489140 A/swine/North Carolina/SG1391/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI489084 A/swine/Arkansas/SG1378/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI489070 A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI489056 A/swine/Minnesota/3128/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1606/1692 (94%) EPI459493 A/swine/Ohio/11SW162/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI415563 A/swine/Ohio/11SW174/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI415513 A/swine/Ohio/11SW168/2011 (A/H0) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI399576 A/swine/Minnesota/A01240293/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1605/1691 (94%) EPI391408 A/swine/Illinois/A01203204/2012 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI391152 A/swine/Iowa/A01202687/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI391014 A/swine/Iowa/A01202439/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI391013 A/swine/Iowa/A01202438/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI390923 A/swine/Indiana/A01049349/2010 (H1N2) (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI390840 A/swine/Illinois/A01243263/2012 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI384529 A/swine/Illinois/A01134851/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI384426 A/swine/Illinois/A01201927/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI384423 A/swine/Illinois/A00907727/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI384414 A/swine/Illinois/A01047397/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI384371 A/swine/Ohio/A01076765/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI384358 A/swine/Minnesota/A01076326/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1606/1692 (94%) EPI384259 A/swine/Minnesota/A01076335/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1606/1692 (94%) EPI383447 A/swine/Illinois/A01134652/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI376206 A/swine/Ohio/FAH11-1/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1609/1695 (94%) EPI371652 A/swine/Minnesota/A01134333/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI371651 A/swine/Minnesota/A01134332/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI371291 A/swine/Minnesota/A01134593/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI371282 A/swine/Minnesota/A01116140/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1605/1691 (94%) EPI371277 A/swine/Minnesota/A01076331/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1606/1692 (94%) EPI369097 A/swine/Illinois/A01134269/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI369096 A/swine/Illinois/A01134264/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367664 A/swine/Illinois/A01047177/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367663 A/swine/Illinois/A01047172/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367662 A/swine/Illinois/A01047166/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367660 A/swine/Illinois/A01047155/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367659 A/swine/Illinois/A01047153/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367658 A/swine/Illinois/A01047149/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367657 A/swine/Illinois/A01047145/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367653 A/swine/Illinois/A01047097/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI367609 A/swine/Illinois/A01243094/2012 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI353694 A/swine/Mississippi/A01049443/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI338419 A/swine/Iowa/A01049718/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI327083 A/swine/Minnesota/2992-9/2009 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1607/1693 (94%) EPI324858 A/swine/Iowa/A01049450/2011 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI281213 A/swine/Minnesota/03043/2010 (A/H1N2) segment 4 (HA) 2645.5 0.000000e+00 1608/1694 (94%) EPI485972 A/swine/Iowa/13C094/2013 (A/H1N2) segment 4 (HA) 2641.8 0.000000e+00 1606/1693 (94%) EPI384553 A/swine/Minnesota/A01134592/2010 (A/H1N2) segment 4 (HA) 2641.8 0.000000e+00 1607/1694 (94%) EPI703914 A/swine/Illinois/A01896080/2015 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI586231 A/swine/Indiana/A01260831/2015 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI489154 A/swine/Indiana/04254/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1608/1695 (94%) EPI461417 A/swine/Ohio/11SW149/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI459604 A/swine/Ohio/11SW144/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI459588 A/swine/Ohio/11SW127/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI459485 A/swine/Ohio/11SW133/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415861 A/swine/Ohio/11SW225/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415837 A/swine/Ohio/11SW220/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415828 A/swine/Ohio/11SW218/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415820 A/swine/Ohio/11SW217/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415811 A/swine/Ohio/11SW216/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415803 A/swine/Ohio/11SW215/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415794 A/swine/Ohio/11SW213/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415778 A/swine/Ohio/11SW210/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415770 A/swine/Ohio/11SW209/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415761 A/swine/Ohio/11SW207/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415753 A/swine/Ohio/11SW206/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415736 A/swine/Ohio/11SW204/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415728 A/swine/Ohio/11SW203/2011 (A/H0) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%) EPI415719 A/swine/Ohio/11SW202/2011 (A/H1N2) segment 4 (HA) 2640.0 0.000000e+00 1607/1694 (94%)
niman Posted December 1, 2016 Author Report Posted December 1, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI864026 A/Iowa/32/2016 (A/H1N2) segment 6 (NA) 2569.8 0.000000e+00 1391/1391 (100%) EPI762011 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 6 (NA) 2553.2 0.000000e+00 1386/1388 (99%) EPI762008 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI753590 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI736627 A/swine/Illinois/A01730554/2016 (A/H0) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%) EPI753593 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 6 (NA) 2542.1 0.000000e+00 1384/1388 (99%) EPI711747 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 6 (NA) 2542.1 0.000000e+00 1384/1388 (99%) EPI762145 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI703964 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI682727 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672967 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672961 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI672891 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 6 (NA) 2536.6 0.000000e+00 1383/1388 (99%) EPI703828 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 6 (NA) 2531.0 0.000000e+00 1382/1388 (99%) EPI682796 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 6 (NA) 2531.0 0.000000e+00 1382/1388 (99%) EPI703847 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 6 (NA) 2527.3 0.000000e+00 1381/1388 (99%) EPI687684 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687681 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687678 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI687675 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 6 (NA) 2525.5 0.000000e+00 1381/1388 (99%) EPI760177 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 6 (NA) 2520.0 0.000000e+00 1380/1388 (99%) EPI647508 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 6 (NA) 2514.4 0.000000e+00 1379/1388 (99%) EPI620646 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 6 (NA) 2514.4 0.000000e+00 1379/1388 (99%) EPI678416 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 6 (NA) 2505.2 0.000000e+00 1377/1388 (99%) EPI678322 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 6 (NA) 2503.3 0.000000e+00 1377/1388 (99%) EPI678600 A/swine/Indiana/A01945405/2015 (A/H1N2) segment 6 (NA) 2499.6 0.000000e+00 1376/1388 (99%) EPI682793 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI682790 A/swine/Illinois/A01749186/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI671811 A/swine/Indiana/A02025965/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI641542 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612581 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612536 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612518 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI612515 A/swine/Ohio/A02077256/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586161 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586146 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586143 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586134 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586131 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586122 A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586119 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586069 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586036 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586033 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI586015 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI584741 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 6 (NA) 2497.8 0.000000e+00 1376/1388 (99%) EPI678609 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 6 (NA) 2494.1 0.000000e+00 1375/1388 (99%) EPI590669 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 6 (NA) 2494.1 0.000000e+00 1374/1386 (99%) EPI737400 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI736621 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI704821 A/swine/Illinois/A01749578/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI687589 A/swine/Minnesota/A01941141/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI685643 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI682701 A/swine/Iowa/A01944834/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI669219 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653058 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653037 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653023 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI653016 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI641835 A/swine/Illinois/A02034146/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI641618 A/swine/Illinois/A02024907/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI621372 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI612719 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI612557 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1376/1389 (99%) EPI586158 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI586149 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI586137 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI584791 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 6 (NA) 2492.3 0.000000e+00 1375/1388 (99%) EPI764475 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI753599 A/swine/Oklahoma/A01733480/2016 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI620509 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI612539 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI584815 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 6 (NA) 2488.6 0.000000e+00 1374/1388 (98%) EPI736818 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI704864 A/swine/Indiana/A01727661/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI703894 A/swine/Oklahoma/A01798161/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI678288 A/swine/Iowa/A01945639/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI641536 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI623695 A/swine/Indiana/A01260875/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620615 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620609 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620541 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI620500 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI590795 A/swine/Illinois/A01470861/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI584794 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 6 (NA) 2486.7 0.000000e+00 1374/1388 (98%) EPI678298 A/swine/Indiana/A01945739/2015 (A/H1N2) segment 6 (NA) 2483.0 0.000000e+00 1373/1388 (98%) EPI838551 A/swine/Indiana/A01778290/2016 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI718309 A/swine/Illinois/A01729512/2016 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI689986 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI687653 A/swine/Iowa/A01797314/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI682757 A/swine/Iowa/A01945940/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI678425 A/swine/Oklahoma/A01857957/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI678272 A/swine/Indiana/A01945744/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI669234 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI647529 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI612725 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI612549 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 6 (NA) 2481.2 0.000000e+00 1373/1388 (98%) EPI762037 A/swine/Indiana/A01732805/2016 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1373/1389 (98%) EPI678558 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1372/1388 (98%) EPI641533 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 6 (NA) 2477.5 0.000000e+00 1373/1389 (98%) EPI760248 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI753617 A/swine/Iowa/A01733287/2016 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1373/1389 (98%) EPI753611 A/swine/Oklahoma/A01733331/2016 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI704708 A/swine/Iowa/A01727834/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1373/1389 (98%) EPI704699 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1373/1389 (98%) EPI703973 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI691599 A/swine/Iowa/A01746958/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI687672 A/swine/Illinois/A01749362/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI687659 A/swine/Illinois/A01795970/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI687622 A/swine/Illinois/A01797385/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI685640 A/swine/Iowa/A02025170/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI678662 A/swine/Oklahoma/A01944545/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI678279 A/swine/Iowa/A01795438/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI645052 A/swine/Illinois/A02090176/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI620706 A/swine/Illinois/A01470835/2015 (A/H1N2) segment 6 (NA) 2475.6 0.000000e+00 1372/1388 (98%) EPI750298 A/swine/Iowa/A01732130/2016 (A/H1N2) segment 6 (NA) 2471.9 0.000000e+00 1371/1388 (98%) EPI704921 A/swine/Illinois/A01727590/2015 (A/H1N2) segment 6 (NA) 2471.9 0.000000e+00 1371/1388 (98%) EPI678438 A/swine/Iowa/A01944800/2015 (A/H1N2) segment 6 (NA) 2471.9 0.000000e+00 1371/1388 (98%) EPI845479 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI837160 A/swine/Indiana/A01812095/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI760183 A/swine/Illinois/A01733968/2016 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI736630 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI711759 A/swine/Oklahoma/A01729409/2016 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1372/1389 (98%) EPI704969 A/swine/Iowa/A01796404/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI704927 A/swine/Oklahoma/A01727569/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI704924 A/swine/Illinois/A01796671/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI685635 A/swine/Iowa/A02025166/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI678642 A/swine/Iowa/A01795376/2015 (A/H1N2) segment 6 (NA) 2470.1 0.000000e+00 1371/1388 (98%) EPI703790 A/swine/Iowa/A01796353/2015 (A/H1N2) segment 6 (NA) 2466.4 0.000000e+00 1369/1388 (98%) EPI816889 A/Wisconsin/71/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI778172 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI764529 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI761973 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI737376 A/swine/Illinois/A01731670/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI718315 A/swine/Oklahoma/A01729483/2016 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI703976 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI703967 A/swine/Indiana/A01797714/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI678659 A/swine/Illinois/A01945555/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI672879 A/swine/Illinois/A01945130/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI641444 A/swine/Indiana/A02077934/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI623685 A/swine/Illinois/A01822445/2015 (A/H1N2) segment 6 (NA) 2464.6 0.000000e+00 1370/1388 (98%) EPI703919 A/swine/Illinois/A01797679/2015 (A/H1N2) segment 6 (NA) 2460.9 0.000000e+00 1369/1388 (98%) EPI687662 A/swine/Illinois/A01797392/2015 (A/H1N2) segment 6 (NA) 2460.9 0.000000e+00 1369/1388 (98%) EPI736839 A/swine/Illinois/A01729946/2016 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI711725 A/swine/Illinois/A01729323/2016 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI704948 A/swine/Illinois/A01727266/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI704711 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1370/1389 (98%) EPI704602 A/swine/Illinois/A01727702/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI703931 A/swine/Illinois/A01896114/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI678588 A/swine/Illinois/A01945208/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI647579 A/swine/Illinois/A02034785/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI623698 A/swine/Indiana/A01260874/2015 (A/H1N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI538921 A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 6 (NA) 2459.0 0.000000e+00 1370/1389 (98%) EPI531098 A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 6 (NA) 2459.0 0.000000e+00 1369/1388 (98%) EPI764924 A/swine/Illinois/A01895418/2016 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI750304 A/swine/Iowa/A01732316/2016 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1370/1390 (98%) EPI718294 A/swine/Illinois/A01729531/2016 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI718282 A/swine/Iowa/A01729699/2016 (A/H3N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI704884 A/swine/Iowa/A01941556/2015 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI704612 A/swine/Indiana/A01727837/2015 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI704608 A/swine/Illinois/A01727680/2015 (A/H0) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI597692 A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI597689 A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 6 (NA) 2453.5 0.000000e+00 1368/1388 (98%) EPI615104 A/swine/Kansas/A01377559/2015 (A/H1N2) segment 6 (NA) 2451.6 0.000000e+00 1353/1366 (99%) EPI760168 A/swine/Iowa/A01733501/2016 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI753757 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI682833 A/swine/Iowa/A01795851/2015 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI682745 A/swine/Illinois/A01944886/2015 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI600310 A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI590498 A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI558899 A/swine/Iowa/A01566473/2014 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI545881 A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI545777 A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1368/1389 (98%) EPI542568 A/swine/South Dakota/A01482581/2014 (A/H1N2) segment 6 (NA) 2447.9 0.000000e+00 1367/1388 (98%) EPI704918 A/swine/Illinois/A01727363/2015 (A/H1N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI623636 A/swine/Iowa/A02077681/2015 (A/H1N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI586063 A/swine/Iowa/A01478820/2015 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI573739 A/swine/Indiana/A01260735/2014 (A/H1N2) segment 6 (NA) 2442.4 0.000000e+00 1367/1389 (98%) EPI573573 A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI530300 A/swine/Illinois/A01410453/2014 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI530285 A/swine/Illinois/A01475190/2014 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI510212 A/swine/Illinois/A01409994/2014 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI507285 A/swine/Illinois/A01411097/2014 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI505103 A/swine/Iowa/A01409518/2013 (A/H3N2) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI505043 A/swine/Illinois/A01410018/2013 (A/H0) segment 6 (NA) 2442.4 0.000000e+00 1366/1388 (98%) EPI504865 A/swine/Illinois/A01411096/2013 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1365/1388 (98%) EPI703850 A/swine/Illinois/A01797468/2015 (A/H1N2) segment 6 (NA) 2436.9 0.000000e+00 1365/1388 (98%) EPI573470 A/swine/Iowa/A01840226/2014 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1365/1388 (98%) EPI530310 A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1365/1388 (98%) EPI505063 A/swine/Illinois/A01409657/2014 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1365/1388 (98%) EPI647624 A/swine/Michigan/A01104086/2015 (A/H0) segment 6 (NA) 2431.3 0.000000e+00 1364/1388 (98%) EPI600302 A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 6 (NA) 2431.3 0.000000e+00 1365/1389 (98%) EPI558863 A/swine/Iowa/A01477772/2014 (A/H1N2) segment 6 (NA) 2431.3 0.000000e+00 1364/1388 (98%) EPI586093 A/swine/Minnesota/A01489541/2015 (A/H1N2) segment 6 (NA) 2427.6 0.000000e+00 1364/1389 (98%) EPI764466 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 6 (NA) 2422.1 0.000000e+00 1362/1388 (98%) EPI764451 A/swine/Illinois/A01894756/2016 (A/H1N2) segment 6 (NA) 2420.2 0.000000e+00 1362/1388 (98%) EPI559528 A/swine/North Carolina/A01476560/2014 (A/H3N2) segment 6 (NA) 2420.2 0.000000e+00 1362/1388 (98%) EPI573440 A/swine/Missouri/A01555163/2014 (A/H3N2) segment 6 (NA) 2416.5 0.000000e+00 1361/1388 (98%) EPI641412 A/swine/Minnesota/A01822846/2015 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1361/1388 (98%) EPI597683 A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 6 (NA) 2414.7 0.000000e+00 1362/1389 (98%) EPI538991 A/swine/Michigan/A01410962/2014 (A/H3N2) segment 6 (NA) 2414.7 0.000000e+00 1361/1388 (98%) EPI672946 A/swine/Iowa/A01944211/2015 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI586039 A/swine/Illinois/A01555570/2015 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI573052 A/swine/Iowa/A01840061/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI533783 A/swine/North Carolina/A01410800/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI531060 A/swine/North Carolina/A01410593/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI510215 A/swine/Illinois/A01475015/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI510200 A/swine/Illinois/A01410268/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI510191 A/swine/Illinois/A01411463/2014 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI510174 A/swine/Illinois/A01411461/2014 (A/H0) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI460388 A/swine/Indiana/A01260252/2013 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI460382 A/swine/Indiana/A01260284/2013 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI460373 A/swine/Indiana/A01260276/2013 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI460367 A/swine/Indiana/A01260261/2013 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1360/1388 (97%) EPI393526 A/West Virginia/15/2012 (A/H3N2) segment 6 (NA) 2409.2 0.000000e+00 1362/1391 (97%) EPI704886 A/swine/Minnesota/A01941555/2015 (A/H1N2) segment 6 (NA) 2405.5 0.000000e+00 1360/1389 (97%) EPI532377 A/swine/North Carolina/A01410687/2014 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1359/1388 (97%) EPI508859 A/swine/Illinois/A01410110/2014 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1359/1388 (97%) EPI684576 A/swine/Iowa/A01944877/2015 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI645060 A/swine/Indiana/A01260926/2015 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI573351 A/swine/Minnesota/A01567013/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI550294 A/swine/Iowa/A01410971/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI545853 A/swine/Iowa/A01476426/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI545408 A/swine/Iowa/A01476267/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI545380 A/swine/Iowa/A01476223/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI542531 A/swine/Minnesota/A01477050/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI538665 A/swine/Iowa/A01410752/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI534948 A/swine/Iowa/A01501048/2014 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI488006 A/swine/USA/A01291038/2013 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI460391 A/swine/Indiana/A01260254/2013 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI446797 A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI443547 A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI443523 A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI433303 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI433295 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI414172 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI401685 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI401681 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI400106 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI400096 A/swine/Indiana/A00968390/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI398520 A/swine/Ohio/A01133464/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI398502 A/swine/Ohio/A01133466/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI398494 A/swine/Maryland/A01104048/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI398486 A/swine/Maryland/A01104040/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI398034 A/Maryland/22/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397661 A/Maryland/28/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397620 A/Maryland/25/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397531 A/Ohio/47/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397523 A/Ohio/44/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397515 A/Ohio/36/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397431 A/Ohio/81/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397350 A/Ohio/37/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397208 A/Ohio/78/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI397088 A/Indiana/52/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI396276 A/Indiana/135/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI396261 A/Indiana/127/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI396253 A/Indiana/126/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI396234 A/Ohio/34/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI395885 A/swine/Ohio/12TOSU307/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI395336 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI395266 A/Ohio/65/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI395258 A/Ohio/35/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI394062 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393781 A/Ohio/74/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1361/1391 (97%) EPI393694 A/West Virginia/16/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393680 A/West Virginia/10/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393672 A/Ohio/71/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393316 A/Ohio/38/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393310 A/West Virginia/09/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI393305 A/Indiana/18/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI392704 A/Indiana/52/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI392683 A/Indiana/13/2012 (A/H3N2) segment 6 (NA) 2403.6 0.000000e+00 1359/1388 (97%) EPI532374 A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1358/1388 (97%) EPI530997 A/swine/Iowa/A01410600/2014 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1358/1388 (97%) EPI395712 A/swine/Indiana/A01104016/2012 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1358/1388 (97%) EPI816881 A/Minnesota/70/2016 (A/H1N2) segment 6 (NA) 2398.1 0.000000e+00 1359/1389 (97%) EPI574155 A/Kansas/A01377457/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI573480 A/swine/North Carolina/A01840158/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI559534 A/swine/North Carolina/A01476698/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI558882 A/swine/North Carolina/A01476771/2014 (A/H0) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI558852 A/swine/Minnesota/A01477780/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI558843 A/swine/North Carolina/A01477778/2014 (A/H0) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI542448 A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI502642 A/swine/South Dakota/A01366093/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI448835 A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI446924 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI446916 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI446868 A/swine/Ohio/12TOSU411/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI446860 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI446835 A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI433542 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI433535 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI408203 A/swine/Indiana/A01260099/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI406575 A/swine/Iowa/A01203863/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI401703 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI401688 A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI401610 A/swine/Ohio/A00138552/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI398671 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI398544 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI398536 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397946 A/Ohio/84/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397904 A/Hawaii/03/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397626 A/Ohio/57/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397623 A/Indiana/150/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397554 A/Ohio/86/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397502 A/Indiana/104/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397425 A/Minnesota/15/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397403 A/Indiana/99/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI397097 A/Indiana/103/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI396298 A/Maryland/23/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI396207 A/Indiana/149/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI396191 A/Ohio/77/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI396182 A/Indiana/77/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI395876 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI395868 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI394925 A/Illinois/11/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI394059 A/Indiana/38/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI393701 A/Ohio/64/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI393518 A/Indiana/65/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI393297 A/Indiana/21/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI393291 A/Indiana/38/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI392752 A/Indiana/16/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI392698 A/Indiana/46/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI392695 A/Indiana/43/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI392691 A/Indiana/31/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI383539 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1358/1388 (97%) EPI346492 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2398.1 0.000000e+00 1360/1391 (97%) EPI750301 A/swine/North Carolina/A01732197/2016 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI678505 A/swine/Minnesota/A01940683/2015 (A/H1N2) segment 6 (NA) 2392.5 0.000000e+00 1359/1390 (97%) EPI584735 A/swine/Illinois/A01555638/2015 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI572995 A/swine/North Carolina/A01840071/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI572990 A/swine/Nebraska/A01555104/2014 (A/H0) segment 6 (NA) 2392.5 0.000000e+00 1358/1389 (97%) EPI545841 A/swine/North Carolina/A01476427/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI542564 A/swine/North Carolina/A01476078/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI542552 A/swine/North Carolina/A01476177/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI542543 A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI538671 A/swine/Oklahoma/A01475757/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI533959 A/swine/Iowa/A01501046/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI515310 A/swine/Kansas/13-152087/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI509736 A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI508789 A/swine/Nebraska/A01491325/2014 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI506275 A/swine/Nebraska/A01393702/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI506266 A/swine/Nebraska/A01395901/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI492350 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI472184 A/swine/Iowa/A01432840/2013 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI446885 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI446876 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI446827 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI443555 A/swine/Ohio/12TOSU325/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI443539 A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI443531 A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI443515 A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI443507 A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI427179 A/swine/Indiana/A01260015/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI426886 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI414188 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI406470 A/swine/Indiana/A01260041/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI404892 A/Iowa/16/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI400102 A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI398123 A/swine/North Carolina/A01203801/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397931 A/Ohio/19/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397918 A/Ohio/17/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397750 A/Ohio/87/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397627 A/Ohio/63/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397625 A/Ohio/43/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397624 A/Ohio/80/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397621 A/Ohio/79/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397547 A/Ohio/83/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397539 A/Ohio/56/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397395 A/Indiana/93/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397384 A/Indiana/138/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397377 A/Indiana/123/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI397363 A/Ohio/23/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI396279 A/Indiana/144/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI396269 A/Indiana/133/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395958 A/swine/Indiana/A00968379/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395950 A/swine/Indiana/A00968376/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395934 A/swine/Indiana/A00968370/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395921 A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395860 A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395852 A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395742 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395734 A/swine/Indiana/A01104030/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395330 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395327 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI395250 A/Indiana/152/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI394936 A/Ohio/75/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI394932 A/Wisconsin/23/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI394920 A/Ohio/69/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI394912 A/Indiana/132/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI394905 A/Ohio/62/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI393696 A/Indiana/20/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI393687 A/Ohio/23/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI393666 A/Ohio/28/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI393510 A/Ohio/52/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI393294 A/Ohio/24/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI392677 A/Ohio/13/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388365 A/Ohio/17/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388345 A/Indiana/15/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388338 A/Ohio/16/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388329 A/Ohio/20/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388320 A/Ohio/18/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388318 A/Ohio/20/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388311 A/Ohio/15/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388304 A/Ohio/14/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI381872 A/Hawaii/03/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1355/1385 (97%) EPI381864 A/Indiana/09/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI378522 A/Indiana/09/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI378514 A/Indiana/07/2012 (A/H3N2) segment 6 (NA) 2392.5 0.000000e+00 1357/1388 (97%) EPI388289 A/Indiana/17/2012 (A/H3N2) segment 6 (NA) 2390.7 0.000000e+00 1352/1381 (97%) EPI685646 A/swine/North Carolina/A02025176/2015 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1356/1388 (97%) EPI542549 A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1356/1388 (97%) EPI397924 A/Ohio/18/2012 (A/H3N2) segment 6 (NA) 2388.8 0.000000e+00 1356/1388 (97%) EPI653891 A/swine/Iowa/A02025416/2015 (A/H1N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI642512 A/Michigan/39/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI620515 A/swine/Iowa/A02076659/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI612572 A/swine/North Carolina/A02076180/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI600450 A/swine/North Carolina/A01477954/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI600348 A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1357/1389 (97%) EPI600316 A/swine/Nebraska/A01566782/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI573808 A/swine/North Carolina/A01840322/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI573794 A/swine/North Carolina/A01840289/2015 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI573036 A/swine/North Carolina/A01555111/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI573021 A/swine/North Carolina/A01840022/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI559531 A/swine/North Carolina/A01476719/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1357/1389 (97%) EPI559026 A/swine/North Carolina/A01566286/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI558840 A/swine/North Carolina/A01478182/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI558835 A/swine/North Carolina/A01476730/2014 (A/H0) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI558820 A/swine/North Carolina/A01476734/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI557541 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1358/1391 (97%) EPI550297 A/swine/Iowa/A01410995/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI550137 A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI548260 A/swine/Iowa/A01476428/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI515307 A/swine/Kansas/13-152086/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI509754 A/swine/Nebraska/A01491558/2014 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI499948 A/swine/Iowa/13H087/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI499655 A/swine/North Carolina/A01409048/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI493013 A/swine/Kansas/A01377090/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI487337 A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI416856 A/swine/Tennessee/A01104055/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI414180 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI414029 A/swine/Indiana/A01260135/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397561 A/Wisconsin/29/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397445 A/Wisconsin/31/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397439 A/Wisconsin/30/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397411 A/Michigan/16/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397387 A/Indiana/49/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397214 A/Pennsylvania/17/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397212 A/Indiana/115/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI397124 A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI396245 A/Indiana/125/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI396229 A/Indiana/147/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI396222 A/Indiana/57/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI395942 A/swine/Indiana/A00968373/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI395929 A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI395893 A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI395343 A/Wisconsin/28/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI395269 A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI394076 A/Wisconsin/27/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI394068 A/Pennsylvania/11/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI394065 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI392933 A/Minnesota/11/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1354/1385 (97%) EPI392754 A/Indiana/14/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1357/1389 (97%) EPI392710 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI392707 A/Indiana/59/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI391438 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI388331 A/Utah/10/2012 (A/H3N2) segment 6 (NA) 2387.0 0.000000e+00 1356/1388 (97%) EPI392925 A/Maryland/20/2012 (A/H3N2) segment 6 (NA) 2385.1 0.000000e+00 1349/1378 (97%) EPI593957 A/swine/Minnesota/A01489046/2014 (A/H3N2) segment 6 (NA) 2383.3 0.000000e+00 1355/1388 (97%) EPI492379 A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 6 (NA) 2383.3 0.000000e+00 1361/1395 (97%) EPI489726 A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 6 (NA) 2383.3 0.000000e+00 1361/1395 (97%) EPI709842 A/swine/North Carolina/A01728545/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI687656 A/swine/Illinois/A01796273/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI678633 A/swine/North Carolina/A01945452/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI671793 A/swine/Illinois/A01857433/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI623704 A/swine/Indiana/A01260882/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI623701 A/swine/Indiana/A01260863/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI600345 A/swine/North Carolina/A01476954/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI598965 A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI597662 A/swine/North Carolina/A01476883/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI597656 A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI584809 A/swine/North Carolina/A01841335/2015 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI557543 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI557533 A/Wisconsin/24/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI550081 A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI546918 A/swine/Indiana/13TOSU1054/2013 (A/H0) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI546892 A/swine/Indiana/13TOSU1141/2013 (A/H0) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI542525 A/swine/North Carolina/A01477142/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI542445 A/swine/Nebraska/A01476165/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI530346 A/swine/Iowa/A01480817/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI528783 A/swine/Indiana/A01260479/2014 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI528405 A/swine/Ohio/13TOSU1547/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1355/1388 (97%) EPI527994 A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527846 A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527842 A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527152 A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527135 A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527073 A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527050 A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) EPI527008 A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 6 (NA) 2381.5 0.000000e+00 1356/1389 (97%) Alignments
niman Posted December 1, 2016 Author Report Posted December 1, 2016 Align Segment-ID Name Score E-Value Identity EPI864022 A/Iowa/32/2016 (A/H1N2) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI762012 A/swine/Illinois/A01733165/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI762009 A/swine/Illinois/A01732740/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI753594 A/swine/Illinois/A01733640/2016 (A/H1N2) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI736628 A/swine/Illinois/A01730554/2016 (A/H0) segment 7 (MP) 1803.5 0.000000e+00 981/983 (99%) EPI753591 A/swine/Illinois/A01733533/2016 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703965 A/swine/Illinois/A01797640/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703848 A/swine/Illinois/A01797505/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI703827 A/swine/Illinois/A01749468/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687683 A/swine/Illinois/A01749292/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687680 A/swine/Illinois/A01749386/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI687677 A/swine/Illinois/A01749354/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI682795 A/swine/Illinois/A01749173/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI682728 A/swine/Illinois/A01944998/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672968 A/swine/Illinois/A01795259/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672962 A/swine/Illinois/A01945293/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI672892 A/swine/Illinois/A01945165/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI647509 A/swine/Illinois/A02025300/2015 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 980/983 (99%) EPI711748 A/swine/Illinois/A01729080/2016 (A/H1N2) segment 7 (MP) 1794.2 0.000000e+00 979/983 (99%) EPI612519 A/swine/Arkansas/A02076312/2015 (A/H1N2) segment 7 (MP) 1794.2 0.000000e+00 979/983 (99%) EPI854007 A/swine/Indiana/A01732606/2016 (A/H1N1) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI764476 A/swine/Indiana/A01894865/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI762146 A/swine/Illinois/A01732985/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI760247 A/swine/Oklahoma/A01676763/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI753612 A/swine/Oklahoma/A01733331/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI737401 A/swine/Indiana/A01731476/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI736622 A/swine/Oklahoma/A01730659/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI718316 A/swine/Oklahoma/A01729483/2016 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI704613 A/swine/Indiana/A01727837/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI687674 A/swine/Illinois/A01749356/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI682792 A/swine/Illinois/A01749275/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678663 A/swine/Oklahoma/A01944545/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678417 A/swine/Illinois/A01795486/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI678323 A/swine/Illinois/A01945741/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641619 A/swine/Illinois/A02024907/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641537 A/swine/Arkansas/A02024832/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI641534 A/swine/Oklahoma/A02024960/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI620647 A/swine/Illinois/A02077350/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI620501 A/swine/Oklahoma/A02076821/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612540 A/swine/Arkansas/A02076387/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612537 A/swine/Arkansas/A02076547/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI612516 A/swine/Ohio/A02077256/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI590670 A/swine/Oklahoma/A01841728/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586162 A/swine/Oklahoma/A01841015/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586159 A/swine/Arkansas/A01841034/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586150 A/swine/Arkansas/A01841049/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586147 A/swine/Oklahoma/A01841014/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586144 A/swine/Illinois/A01478910/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586138 A/swine/Oklahoma/A01841022/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586135 A/swine/Arkansas/A01841004/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586123 A/swine/Oklahoma/A01478925/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586120 A/swine/Oklahoma/A01478965/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586070 A/swine/Indiana/A01840743/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586016 A/swine/Illinois/A01840755/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584816 A/swine/Indiana/A02077077/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584795 A/swine/Arkansas/A01841343/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584792 A/swine/Indiana/A02077078/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI584742 A/swine/Arkansas/A01841266/2015 (A/H1N2) segment 7 (MP) 1792.4 0.000000e+00 979/983 (99%) EPI586132 A/swine/Illinois/A01478979/2015 (A/H1N2) segment 7 (MP) 1788.7 0.000000e+00 978/983 (99%) EPI764452 A/swine/Illinois/A01894756/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI762015 A/swine/Illinois/A01732936/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI760178 A/swine/Illinois/A01733826/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI736819 A/swine/Arkansas/A01729957/2016 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI736637 A/swine/Indiana/A01730580/2016 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI709873 A/swine/Ohio/A01728296/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI703929 A/swine/Ohio/A01798226/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI703913 A/swine/Arkansas/A01798224/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685644 A/swine/Indiana/A02025254/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685641 A/swine/Iowa/A02025170/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI685636 A/swine/Iowa/A02025166/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI684597 A/swine/Arkansas/A01797067/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI684589 A/swine/Arkansas/A01797066/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI682813 A/swine/Ohio/A01795737/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI682722 A/swine/Arkansas/A01797068/2015 (A/H1N1) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678660 A/swine/Illinois/A01945555/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678610 A/swine/Oklahoma/A01857679/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678580 A/swine/Arkansas/A01945350/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678426 A/swine/Oklahoma/A01857957/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI678302 A/swine/Arkansas/A01945580/2015 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653038 A/swine/Indiana/A01260906/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653024 A/swine/Indiana/A01260885/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI653017 A/swine/Indiana/A01260888/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI647530 A/swine/Illinois/A02025282/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI645051 A/swine/Illinois/A02090176/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI641836 A/swine/Illinois/A02034146/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI641445 A/swine/Indiana/A02077934/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI623686 A/swine/Illinois/A01822445/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI621371 A/swine/Illinois/A01820488/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620616 A/swine/Indiana/A02024006/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620610 A/swine/Indiana/A02077457/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620542 A/swine/Indiana/A02077486/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI620510 A/swine/Oklahoma/A02076844/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612724 A/swine/Illinois/A01820414/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612718 A/swine/Illinois/A01820457/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612582 A/swine/Illinois/A01554475/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612558 A/swine/Illinois/A02077158/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI612548 A/swine/Illinois/A01471010/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI600311 A/swine/Minnesota/A01566625/2014 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI586037 A/swine/Indiana/A01840753/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI586034 A/swine/Arkansas/A01840760/2015 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI545880 A/swine/Minnesota/A01482977/2014 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 978/983 (99%) EPI753600 A/swine/Oklahoma/A01733480/2016 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI750305 A/swine/Iowa/A01732316/2016 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI736869 A/swine/Illinois/A01729946/2016 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI704970 A/swine/Iowa/A01796404/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI704949 A/swine/Illinois/A01727266/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI704919 A/swine/Illinois/A01727363/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI704865 A/swine/Indiana/A01727661/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI704603 A/swine/Illinois/A01727702/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI703932 A/swine/Illinois/A01896114/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI689987 A/swine/Indiana/A01812040/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI682822 A/swine/Indiana/A01796207/2015 (A/H3N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI682746 A/swine/Illinois/A01944886/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678601 A/swine/Indiana/A01945405/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678589 A/swine/Illinois/A01945208/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678559 A/swine/Oklahoma/A01944447/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678405 A/swine/Indiana/A01945792/2015 (A/H1N1) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678299 A/swine/Indiana/A01945739/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI678273 A/swine/Indiana/A01945744/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI669235 A/swine/Oklahoma/A01857063/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI653059 A/swine/Indiana/A01260910/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI647580 A/swine/Illinois/A02034785/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI641543 A/swine/Arkansas/A02035008/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI623699 A/swine/Indiana/A01260874/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI623696 A/swine/Indiana/A01260875/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI620705 A/swine/Illinois/A01470835/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI600301 A/swine/South Dakota/A01483859/2014 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI590794 A/swine/Illinois/A01470861/2015 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI573740 A/swine/Indiana/A01260735/2014 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 977/983 (99%) EPI687663 A/swine/Illinois/A01797392/2015 (A/H1N2) segment 7 (MP) 1777.6 0.000000e+00 976/983 (99%) EPI845480 A/swine/Indiana/A01812050/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI837153 A/swine/Indiana/A01812236/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI778173 A/swine/Alabama/A01104091/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI762038 A/swine/Indiana/A01732805/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI761974 A/swine/Indiana/A01812190/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI753758 A/swine/Indiana/A01812189/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI753618 A/swine/Iowa/A01733287/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI718310 A/swine/Illinois/A01729512/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI718295 A/swine/Illinois/A01729531/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI718283 A/swine/Iowa/A01729699/2016 (A/H3N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI711760 A/swine/Oklahoma/A01729409/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI711726 A/swine/Illinois/A01729323/2016 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI704925 A/swine/Illinois/A01796671/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI704885 A/swine/Iowa/A01941556/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI704820 A/swine/Illinois/A01749578/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI704588 A/swine/Indiana/A01727685/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI703977 A/swine/Indiana/A01797599/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI703974 A/swine/Illinois/A01896091/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI703968 A/swine/Indiana/A01797714/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI703920 A/swine/Illinois/A01797679/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI703895 A/swine/Oklahoma/A01798161/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI691598 A/swine/Iowa/A01746958/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI687623 A/swine/Illinois/A01797385/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI687590 A/swine/Minnesota/A01941141/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI682789 A/swine/Illinois/A01749186/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI682758 A/swine/Iowa/A01945940/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI682702 A/swine/Iowa/A01944834/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI678643 A/swine/Iowa/A01795376/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI678289 A/swine/Iowa/A01945639/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI678280 A/swine/Iowa/A01795438/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI672880 A/swine/Illinois/A01945130/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI671812 A/swine/Indiana/A02025965/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI669220 A/swine/Arkansas/A01770795/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI597642 A/swine/Iowa/A01476877/2014 (A/H3N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI597636 A/swine/Iowa/A01476878/2014 (A/H3N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI590497 A/swine/Minnesota/A01470654/2015 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 977/984 (99%) EPI559571 A/swine/Iowa/A01476715/2014 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI557798 A/swine/Minnesota/A01566467/2014 (A/H1N1) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI538922 A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 7 (MP) 1775.8 0.000000e+00 976/983 (99%) EPI816885 A/Wisconsin/71/2016 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI764507 A/swine/Illinois/A01895648/2016 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI764467 A/swine/Illinois/A01894603/2016 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI760169 A/swine/Iowa/A01733501/2016 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI750299 A/swine/Iowa/A01732130/2016 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI704928 A/swine/Oklahoma/A01727569/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI704709 A/swine/Iowa/A01727834/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI704700 A/swine/Iowa/A01727813/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI703851 A/swine/Illinois/A01797468/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI687660 A/swine/Illinois/A01795970/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI687613 A/swine/Minnesota/A01941115/2015 (A/H3N2) segment 7 (MP) 1770.2 0.000000e+00 976/984 (99%) EPI682834 A/swine/Iowa/A01795851/2015 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI597684 A/swine/Minnesota/A01566458/2014 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI586004 A/swine/Iowa/A01489235/2015 (A/H1N1) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI558864 A/swine/Iowa/A01477772/2014 (A/H1N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%) EPI760184 A/swine/Illinois/A01733968/2016 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI736631 A/swine/Ohio/A01730712/2016 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI704922 A/swine/Illinois/A01727590/2015 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 975/984 (99%) EPI703791 A/swine/Iowa/A01796353/2015 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI687671 A/swine/Illinois/A01749362/2015 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI687594 A/swine/Minnesota/A01941091/2015 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 975/984 (99%) EPI678439 A/swine/Iowa/A01944800/2015 (A/H1N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI612579 A/swine/Iowa/A02076179/2015 (A/H3N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI568714 A/swine/Missouri/A01555163/2014 (A/H3N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI531099 A/swine/Minnesota/A01493481/2014 (A/H3N2) segment 7 (MP) 1764.7 0.000000e+00 974/983 (99%) EPI623637 A/swine/Iowa/A02077681/2015 (A/H1N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI597693 A/swine/Minnesota/A01566612/2014 (A/H1N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI586064 A/swine/Iowa/A01478820/2015 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI573471 A/swine/Iowa/A01840226/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI558900 A/swine/Iowa/A01566473/2014 (A/H1N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI545778 A/swine/Minnesota/A01565282/2014 (A/H1N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI538992 A/swine/Michigan/A01410962/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI510216 A/swine/Illinois/A01475015/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI510213 A/swine/Illinois/A01409994/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI510201 A/swine/Illinois/A01410268/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI510192 A/swine/Illinois/A01411463/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI510175 A/swine/Illinois/A01411461/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI507286 A/swine/Illinois/A01411097/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI505104 A/swine/Iowa/A01409518/2013 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI505064 A/swine/Illinois/A01409657/2014 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI504869 A/swine/Illinois/A01411096/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI467962 A/swine/Minnesota/A01351603/2013 (A/H3N2) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI704887 A/swine/Minnesota/A01941555/2015 (A/H1N2) segment 7 (MP) 1755.4 0.000000e+00 972/983 (98%) EPI615103 A/swine/Kansas/A01377559/2015 (A/H1N2) segment 7 (MP) 1755.4 0.000000e+00 963/969 (99%) EPI711687 A/swine/Minnesota/A01941579/2015 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI687596 A/swine/Minnesota/A01941249/2015 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI678270 A/swine/Minnesota/A01940819/2015 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI654000 A/swine/Minnesota/A01823864/2015 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI620634 A/swine/Iowa/A01554775/2015 (A/H1N1) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI597690 A/swine/Minnesota/A01566287/2014 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI559214 A/swine/Minnesota/A01483483/2014 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI546902 A/swine/Indiana/13TOSU1982/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI545854 A/swine/Iowa/A01476426/2014 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI530311 A/swine/North Carolina/A01410529/2014 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI508898 A/swine/Illinois/A01409928/2014 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI508860 A/swine/Illinois/A01410110/2014 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI508838 A/swine/Illinois/A01409932/2014 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI492351 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI487336 A/swine/Minnesota/A01364816/2013 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI464431 A/swine/Ohio/A01351184/2013 (A/H1N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI451230 A/swine/Ohio/A01208181/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI446881 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI446873 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI446857 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI446832 A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI446824 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI414181 A/swine/Pennsylvania/A01104050/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI407274 A/Minnesota/18/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI401715 A/swine/Pennsylvania/A01104049/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI401659 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI401615 A/swine/Minnesota/A01301908/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI398545 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI398537 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397957 A/Ohio/88/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397943 A/Ohio/84/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397902 A/Hawaii/03/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397551 A/Ohio/86/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397535 A/Ohio/56/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397435 A/Wisconsin/30/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI397421 A/Minnesota/15/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI396197 A/Ohio/79/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI396187 A/Ohio/77/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI396172 A/Ohio/80/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395930 A/swine/Ohio/12TOSU293/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395877 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395869 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395354 A/Pennsylvania/17/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395340 A/Wisconsin/28/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI395268 A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI394928 A/Wisconsin/23/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI393916 A/swine/Indiana/A00968380/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI393699 A/Ohio/64/2012 (A/H3N2) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI505041 A/swine/Illinois/A01410018/2013 (A/H0) segment 7 (MP) 1751.7 0.000000e+00 971/983 (98%) EPI394067 A/Pennsylvania/11/2012 (A/H3N2) segment 7 (MP) 1751.7 0.000000e+00 971/982 (98%) EPI394917 A/Ohio/69/2012 (A/H3N2) segment 7 (MP) 1749.9 0.000000e+00 971/983 (98%) EPI687614 A/swine/Iowa/A01941159/2015 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI672947 A/swine/Iowa/A01944211/2015 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI672864 A/swine/Iowa/A01940296/2015 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI671794 A/swine/Illinois/A01857433/2015 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI653994 A/swine/Iowa/A01940123/2015 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI600424 A/swine/North Carolina/A01476920/2014 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI598966 A/swine/North Carolina/A01476757/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI598963 A/swine/North Carolina/A01477737/2014 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI593952 A/swine/Minnesota/A01567878/2015 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI586040 A/swine/Illinois/A01555570/2015 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI584848 A/swine/Illinois/A01489871/2014 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI568817 A/swine/Minnesota/A01567359/2014 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI568686 A/swine/Illinois/A01462285/2014 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI568683 A/swine/Minnesota/A01469329/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI557795 A/swine/North Carolina/A01477770/2014 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550295 A/swine/Iowa/A01410971/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550289 A/swine/Illinois/A01502036/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550280 A/swine/Indiana/13TOSU4382/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550224 A/swine/Indiana/13TOSU4561/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550215 A/swine/Indiana/13TOSU4293/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550173 A/swine/Indiana/13TOSU1999/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550138 A/swine/Texas/13TOSU0060/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550117 A/swine/Indiana/13TOSU4284/2013 (A/H0) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550103 A/swine/Indiana/13TOSU4563/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550082 A/swine/Ohio/13TOSU0726/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550068 A/swine/Indiana/13TOSU5669/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI550061 A/swine/Indiana/13TOSU5238/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI549963 A/swine/Indiana/13TOSU5869/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI547388 A/swine/Indiana/13TOSU1991/2013 (A/H0) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI542550 A/swine/North Carolina/A01476072/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI542544 A/swine/North Carolina/A01476099/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI542449 A/swine/North Carolina/A01476196/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539081 A/swine/Illinois/A01502079/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539078 A/swine/Illinois/A01502053/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539075 A/swine/Illinois/A01502060/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539072 A/swine/Illinois/A01502049/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539069 A/swine/Illinois/A01501987/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI539066 A/swine/Illinois/A01502005/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI538919 A/swine/Iowa/A01501685/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI538666 A/swine/Iowa/A01410752/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI534949 A/swine/Iowa/A01501048/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI532470 A/swine/Illinois/A01536186/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI532467 A/swine/Illinois/A01536079/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI532464 A/swine/Illinois/A01536474/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI532375 A/swine/North Carolina/A01410688/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI531037 A/swine/Illinois/A01475279/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI531028 A/swine/Illinois/A01475273/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI530998 A/swine/Iowa/A01410600/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI530301 A/swine/Illinois/A01410453/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI530286 A/swine/Illinois/A01475190/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI528475 A/swine/Ohio/13TOSU0410/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI528427 A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI527868 A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI527099 A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI527088 A/swine/Ohio/13TOSU0411/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI526885 A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI509787 A/swine/Indiana/A01260445/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI509784 A/swine/Indiana/A01260443/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI509775 A/swine/Indiana/A01260426/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI507295 A/swine/Illinois/A00843193/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI505083 A/swine/Illinois/A01409611/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI505070 A/swine/Illinois/A01411232/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI505038 A/swine/Illinois/A01409717/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI505032 A/swine/Illinois/A01409735/2014 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI502385 A/swine/Illinois/A01427136/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI499890 A/swine/Indiana/A01260398/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI492963 A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI492942 A/swine/Iowa/A01365015/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI492390 A/swine/Iowa/A01290438/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI492380 A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI492377 A/swine/Iowa/A01399987/2013 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI489727 A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI485991 A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI485983 A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI484455 A/swine/North Carolina/A01291329/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI482815 A/Indiana/21/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI482812 A/Indiana/11/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI476669 A/swine/Michigan/A01259074/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI472212 A/swine/Indiana/A01260313/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI472197 A/swine/Iowa/A01432817/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI468209 A/swine/Indiana/13TOSU490/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI468201 A/swine/Indiana/13TOSU482/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI465418 A/Indiana/17/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI465389 A/Indiana/09/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI465386 A/Indiana/10/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI465383 A/Indiana/07/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI463710 A/swine/Illinois/A01432795/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI460975 A/swine/Minnesota/A01350866/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI453568 A/swine/Indiana/A01260230/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI451224 A/swine/Ohio/A01208180/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI451205 A/swine/Alabama/A01104056/2012 (A/H0) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI448836 A/swine/Kansas/13-105721a/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI447028 A/swine/Iowa/A01432604/2013 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI446921 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI446913 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443536 A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443528 A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443512 A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443504 A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443110 A/swine/Ohio/A01349495/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443107 A/swine/Ohio/A01349485/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443100 A/swine/Ohio/A01349302/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI443097 A/swine/Ohio/A01349305/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI441501 A/swine/Minnesota/A01349160/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI441498 A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI440749 A/swine/Indiana/A01432492/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433543 A/swine/Ohio/12TOSU374/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433536 A/swine/Ohio/12TOSU371/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433300 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433292 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433280 A/swine/Minnesota/A01280462/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI433271 A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI427186 A/swine/Indiana/A01260163/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI426905 A/swine/Iowa/A01432308/2013 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI426885 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI426874 A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI424076 A/swine/Michigan/A01259003/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414189 A/swine/Indiana/A00968394/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414173 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414154 A/swine/Iowa/A01244302/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414110 A/swine/Ohio/A01279763/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414104 A/swine/Ohio/A01279737/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414053 A/swine/Ohio/A01279640/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414050 A/swine/Ohio/A01279687/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI414038 A/swine/Ohio/A01279522/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI408339 A/swine/Indiana/A01432186/2012 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI408210 A/swine/Indiana/A01260110/2012 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI408204 A/swine/Indiana/A01260099/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI408198 A/swine/Indiana/A01260048/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI407026 A/swine/Ohio/A01279011/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406574 A/swine/Iowa/A01203863/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406535 A/swine/Ohio/A01267959/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406528 A/swine/Illinois/A01432127/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406505 A/swine/Iowa/A01267939/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406471 A/swine/Indiana/A01260041/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI406468 A/swine/Indiana/A01260029/2012 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI404893 A/Iowa/16/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI401623 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI401619 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI400107 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI400104 A/swine/Indiana/A00968397/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398690 A/swine/North Carolina/A01270266/2012 (A/H1N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398529 A/swine/Wisconsin/A00677500/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398503 A/swine/Ohio/A01133466/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398150 A/swine/Ohio/25/2012 (A/H1N1) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398039 A/West Virginia/09/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI398038 A/Ohio/38/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397940 A/Ohio/81/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397921 A/Ohio/18/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397754 A/Wisconsin/35/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397746 A/Ohio/87/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397558 A/Wisconsin/29/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397543 A/Ohio/83/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397527 A/Ohio/47/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397519 A/Ohio/44/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397499 A/Indiana/104/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397407 A/Michigan/16/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397399 A/Indiana/99/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397391 A/Indiana/93/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397380 A/Indiana/138/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397373 A/Indiana/123/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397218 A/Indiana/144/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI397087 A/Indiana/52/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396287 A/Ohio/57/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396282 A/Ohio/43/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396273 A/Indiana/135/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396257 A/Indiana/127/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396249 A/Indiana/126/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396236 A/Indiana/103/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396216 A/Indiana/150/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI396178 A/Indiana/77/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395966 A/swine/Indiana/A00968379/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395951 A/swine/Indiana/A00968376/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395943 A/swine/Indiana/A00968373/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395935 A/swine/Indiana/A00968370/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395922 A/swine/Ohio/12TOSU268/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395894 A/swine/Ohio/12TOSU420/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395861 A/swine/Ohio/12TOSU464/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395853 A/swine/Ohio/12TOSU467/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395743 A/swine/Indiana/A00968386/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395720 A/swine/Indiana/A01104023/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395713 A/swine/Indiana/A01104016/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395329 A/West Virginia/06/2011 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395324 A/West Virginia/06/2011 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395262 A/Ohio/65/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI395246 A/Indiana/152/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI394935 A/Ohio/75/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI394072 A/Wisconsin/27/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI394064 A/Indiana/60/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI394061 A/Indiana/21/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI394058 A/Indiana/38/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393691 A/West Virginia/16/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393677 A/West Virginia/10/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393658 A/Ohio/62/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393514 A/Indiana/65/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393506 A/Ohio/52/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI393302 A/Indiana/18/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392697 A/Indiana/46/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392694 A/Indiana/43/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392692 A/Indiana/38/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392680 A/Ohio/18/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392679 A/Ohio/17/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI392676 A/Ohio/13/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI391475 A/swine/Ohio/A01203186/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI391470 A/swine/North Carolina/A01203272/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388364 A/Ohio/17/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388359 A/Indiana/16/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388355 A/Indiana/21/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388349 A/Indiana/20/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388342 A/Indiana/15/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388335 A/Ohio/16/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388328 A/Ohio/20/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI388315 A/Ohio/20/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI383550 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI378518 A/Indiana/09/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI378510 A/Indiana/07/2012 (A/H3N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI499949 A/swine/Iowa/13H087/2013 (A/H3N2) segment 7 (MP) 1744.4 0.000000e+00 970/983 (98%) EPI392703 A/Indiana/52/2012 (A/H3N2) segment 7 (MP) 1744.4 0.000000e+00 969/981 (98%) EPI388308 A/Ohio/15/2012 (A/H3N2) segment 7 (MP) 1744.4 0.000000e+00 969/981 (98%) EPI816877 A/Minnesota/70/2016 (A/H1N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI704890 A/swine/Minnesota/A01941504/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI704879 A/swine/Minnesota/A01941515/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI694169 A/swine/Kentucky/D0385/2013 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI692960 A/swine/Illinois/A00843253/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI687657 A/swine/Illinois/A01796273/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI687617 A/swine/Minnesota/A01941131/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI672998 A/swine/Minnesota/A01940427/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI653109 A/swine/Ilinois/A02090306/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI645061 A/swine/Indiana/A01260926/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI642508 A/Michigan/39/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI641413 A/swine/Minnesota/A01822846/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI600433 A/swine/North Carolina/A01476974/2014 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI600349 A/swine/North Carolina/A01476949/2014 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI597669 A/swine/North Carolina/A01478207/2014 (A/H1N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI597657 A/swine/North Carolina/A01476848/2014 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI596347 A/swine/Illinois/A01840991/2015 (A/H3N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%)
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