niman Posted December 3, 2016 Report Share Posted December 3, 2016 ICAR-National Institute of High Security Animal Diseases in India have released a full H5N8 sequence, A/painted stork/India/10CA03/2016 (at GISAID), from a painted stork at the Gwalior Zoo in Madhya Pradesh India. Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Isolate detail Isolate name: A/painted stork/India/10CA03/2016 Isolate ID: EPI_ISL_237554 Passage details/history: c1 Type: A / H5N8 Lineage: Sample information Collection date: 2016-10-20 Host Other avian Additional host information: Painted stork Domestic status: Wild Is vaccinated: N Location: India / Madhya Pradesh Additional location information: Gwalior Health status: Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: ICAR-National Institute of High Security Animal Diseases Sample ID given by the sample provider: Address: ICAR-National Institute of High Security Animal Diseases Indian Council of Agricultural Research Anand Nagar, Bhopal 462 022 India Submitting lab: ICAR-National Institute of High Security Animal Diseases Sample ID given by the submitting laboratory: Authors: 'Nagarajan, Shanmugasundaram; Shukla, Shweta; Kumar, Manoj; Murugkar, H. V.; Tosh, Chakradhar; Singh, Vijendra Pal Address: ICAR-National Institute of High Security Animal Diseases Indian Council of Agricultural Research Anand Nagar, Bhopal 462 022 India Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/painted stork/India/10CA03/2016 2309 EPI858841 PB1 A/painted stork/India/10CA03/2016 2307 EPI858842 PA A/painted stork/India/10CA03/2016 2233 EPI858843 HA A/painted stork/India/10CA03/2016 1741 EPI858844 NP A/painted stork/India/10CA03/2016 1565 EPI858845 NA A/painted stork/India/10CA03/2016 1461 EPI858846 MP A/painted stork/India/10CA03/2016 1027 EPI858847 NS A/painted stork/India/10CA03/2016 890 EPI858848 Submitter information Submitter: Nagarajan, Shanmuga sundaram Submission Date: 2016-11-10 Last modifier: Nagarajan, Shanmuga sundaram Last modified: 2016-11-10 Address: ICAR-National Institute of High Security Animal Diseases Indian Council of Agricultural Research Anand Nagar, Bhopal 462 022 India Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1666/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2883.7 0.000000e+00 1593/1609 (99%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1651/1707 (96%) EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1651/1704 (96%) EPI703596 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703591 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1650/1704 (96%) EPI703598 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1649/1704 (96%) EPI703590 A/duck/Eastern China/L0230/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI703589 A/duck/Eastern China/L0321/2010 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1704 (96%) EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2826.5 0.000000e+00 1646/1704 (96%) EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2822.8 0.000000e+00 1638/1693 (96%) EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2821.0 0.000000e+00 1645/1704 (96%) EPI682917 A/duck/Taizhou/TZYG12/2015 (A/H5N6) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI672795 A/duck/Guangdong/s14044/2014 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI672787 A/goose/Guangdong/s13124/2013 (A/H5N8) segment 4 (HA) 2809.9 0.000000e+00 1643/1704 (96%) EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2798.8 0.000000e+00 1641/1704 (96%) EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2798.8 0.000000e+00 1642/1705 (96%) EPI703597 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 4 (HA) 2793.3 0.000000e+00 1641/1705 (96%) EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2776.6 0.000000e+00 1639/1706 (96%) EPI687531 A/Enviroment/Guangdong/SS127/2013(H5N6) (A/H5N6) segment 4 (HA) 2771.1 0.000000e+00 1637/1705 (96%) EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2761.9 0.000000e+00 1634/1704 (95%) EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1633/1704 (95%) EPI676397 A/environment/GZ/75/2014 (A/H5N6) segment 4 (HA) 2748.9 0.000000e+00 1633/1705 (95%) EPI602094 A/chicken/Shenzhen/712/2013 (A/H0) segment 4 (HA) 2737.9 0.000000e+00 1630/1704 (95%) EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2737.9 0.000000e+00 1632/1706 (95%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1631/1706 (95%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1631/1706 (95%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2728.6 0.000000e+00 1630/1706 (95%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI602113 A/environment/Jiangxi/10170/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI601997 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI599369 A/environment/Jiangxi/10171/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI599360 A/environment/Jiangxi/10164/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI599353 A/duck/Jiangxi/10160/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1630/1706 (95%) EPI590895 A/environment/Sichuan/NCLL1/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1628/1704 (95%) EPI837629 A/migratory waterfowl/Hubei/Chenhu1306/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1627/1704 (95%) EPI687515 A/Duck/Guangdong/PY503/2014(H5N6) (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1627/1704 (95%) EPI687498 A/Goose/ Guangdong /JG125/2013(H5N6) (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI681286 A/goose/Zhejiang/727092/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI681281 A/goose/Zhejiang/77167/2014 (A/H5N2) segment 4 (HA) 2721.2 0.000000e+00 1627/1704 (95%) EPI681278 A/duck/Zhejiang/77138/2014 (A/H5N2) segment 4 (HA) 2721.2 0.000000e+00 1627/1704 (95%) EPI602484 A/chicken/Shenzhen/1061/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%) EPI602107 A/black chicken/Jiangxi/10129/2014 (A/H5N6) segment 4 (HA) 2721.2 0.000000e+00 1627/1704 (95%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1394/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2486.7 0.000000e+00 1386/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2475.6 0.000000e+00 1384/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2453.5 0.000000e+00 1380/1406 (98%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2442.4 0.000000e+00 1378/1406 (98%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2436.9 0.000000e+00 1377/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1377/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1376/1407 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2407.3 0.000000e+00 1353/1378 (98%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1360/1398 (97%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1355/1395 (97%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2348.2 0.000000e+00 1362/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1360/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI703636 A/duck/Eastern China/L1120/2012 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585633 A/baikal teal/Korea/2417/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585632 A/baikal teal/Korea/2416/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585630 A/baikal teal/Korea/2406/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585629 A/baikal teal/Korea/2403/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585628 A/baikal teal/Korea/2402/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585626 A/baikal teal/Korea/1458/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585624 A/baikal teal/Korea/1456/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585623 A/baikal teal/Korea/1454/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585620 A/baikal teal/Korea/1448/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585619 A/baikal teal/Korea/1447/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585617 A/baikal teal/Korea/1445/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585616 A/baikal teal/Korea/1441/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561692 A/common teal/Korea/H455-30/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561676 A/bean goose/Korea/H328/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561662 A/Korean native chicken/Korea/H257/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561655 A/breeder chicken/Korea/H250/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561648 A/breeder duck/Korea/H249/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561635 A/white-fronted goose/Korea/H231/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561628 A/mallard/Korea/H207/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561621 A/breeder duck/Korea/H200/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561614 A/breeder duck/Korea/H158/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561579 A/breeder chicken/Korea/H122/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561510 A/bean goose/Korea/H53/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561362 A/broiler duck/Korea/H49/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561355 A/broiler duck/Korea/H48/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561350 A/broiler duck/Korea/H47/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561343 A/Baikal teal/Korea/H41/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561209 A/broiler duck/Korea/H31/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI561198 A/broiler duck/Korea/H29/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI585627 A/baikal teal/Korea/2399/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI585625 A/baikal teal/Korea/1457/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI585622 A/baikal teal/Korea/1452/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561707 A/bean goose/Korea/H40/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561699 A/spot-billed duck/Korea/H455-42/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561683 A/tundra swan/Korea/H411/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561669 A/mallard/Korea/H297/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561607 A/broiler duck/Korea/H145/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561593 A/breeder duck/Korea/H128/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561572 A/Baikal teal/Korea/H96/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561565 A/Baikal teal/Korea/H84/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561558 A/Coot/Korea/H81/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1359/1407 (96%) EPI561551 A/Baikal teal/Korea/H80/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1359/1407 (96%) EPI561544 A/Baikal teal/Korea/H68/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561531 A/Baikal teal/Korea/H66/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561524 A/broiler duck/Korea/H65/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) EPI561517 A/Baikal teal/Korea/H62/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 967/978 (98%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1677.9 0.000000e+00 957/982 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602377 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602370 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602352 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602345 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602338 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602331 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602324 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI601720 A/duck/Jiangxi/29297/2013 (A/H0) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599882 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599875 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599868 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599861 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599854 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599847 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599840 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI599833 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI513559 A/mallard/Sweden/101180/2009 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI513552 A/mallard/Sweden/101081/2009 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI513538 A/mallard/Sweden/100881/2009 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI513499 A/mallard/Sweden/101431/2009 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI513485 A/mallard/Sweden/101298/2009 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI377995 A/common teal/Netherlands/2/2008 (A/H2N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI372437 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI372413 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI372405 A/shoveler/Egypt/00215-NAMRU3/2007 (A/H7N9) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI372397 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI372374 A/shoveler/Egypt/14029-NAMRU3/2006 (A/H1N1) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI335968 A/teal/Chany/7119/2008 (A/H15N4) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI306424 A/shoveler/Koymor/118/2009 (A/H3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI231188 A/spot-billed duck/Korea/540/2008 (A/H6N1) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI181962 A/mallard/Netherlands/2/2005 (A/H4N2) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI316755 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 7 (MP) 1668.6 0.000000e+00 955/981 (97%) EPI220565 A/mallard/Czech Republic/15307-17/2008 (A/H0) segment 7 (MP) 1668.6 0.000000e+00 955/981 (97%) EPI704506 A/duck/Mongolia/326/2015 (A/H10N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI704498 A/duck/Mongolia/245/2015 (A/H10N3) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI704302 A/duck/Mongolia/141/2015 (A/H0N2) segment 7 (MP) 1665.0 0.000000e+00 956/983 (97%) EPI692667 A/chicken/Vietnam/HU1-976/2014 (A/H9N2) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI619097 A/mallard/Sweden/68537/2007 (A/H0) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI618547 A/mallard/Sweden/58705/2006 (A/H5N2) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI618488 A/mallard/Sweden/101589/2009 (A/H11N9) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI514674 A/mallard/Sweden/7925/2005 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI514272 A/mallard/Sweden/52334/2006 (A/H4N6) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) EPI514177 A/mallard/Sweden/58463/2006 (A/H0) segment 7 (MP) 1665.0 0.000000e+00 955/982 (97%) Link to comment Share on other sites More 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niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 4178.2 0.000000e+00 2274/2280 (99%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3928.9 0.000000e+00 2231/2282 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3901.2 0.000000e+00 2225/2281 (97%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3901.2 0.000000e+00 2225/2281 (97%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI222084 A/garganey/Altai/1213/2007 (A/H5N2) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI469175 A/northern shoveler/Hong Kong/MPL133/2010 (A/H2N9) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI600967 A/duck/Jiangxi/24570/2009 (A/H0) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI469224 A/duck/Jiangxi/16309/2010 (A/H7N7) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI469173 A/northern shoveler/Hong Kong/MPL961/2011 (A/H2N9) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI649170 A/duck/Zhejiang/925170/2014 (A/H4N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI649169 A/duck/Zhejiang/925168/2014 (A/H4N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI649168 A/duck/Zhejiang/925166/2014 (A/H4N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI649167 A/duck/Zhejiang/925161/2014 (A/H4N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI540412 A/environment/Bangladesh/1008/2010 (A/H7N9) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI527537 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI540260 A/duck/Bangladesh/1584/2010 (A/H1N3) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI760218 A/duck/Hunan/7/2015 (A/H3N6) segment 1 (PB2) 3790.4 0.000000e+00 2204/2280 (96%) EPI513596 A/mallard/Sweden/81019/2008 (A/H4N6) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI671741 A/lesser white-fronted goose/HuNan/412-3Y/2010 (A/H7N7) segment 1 (PB2) 3779.4 0.000000e+00 2207/2285 (96%) EPI514962 A/mallard/Sweden/79391/2008 (A/H4N2) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513902 A/mallard/Sweden/79308/2008 (A/H4N2) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513895 A/mallard/Sweden/79230/2008 (A/H0) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513865 A/mallard/Sweden/79367/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513851 A/mallard/Sweden/79332/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513828 A/mallard/Sweden/79328/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513826 A/mallard/Sweden/79956/2008 (A/H0) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513805 A/mallard/Sweden/79412/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513798 A/mallard/Sweden/79388/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513760 A/mallard/Sweden/79981/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513728 A/mallard/Sweden/80078/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513707 A/mallard/Sweden/80051/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513690 A/mallard/Sweden/80173/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513676 A/mallard/Sweden/80148/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513669 A/mallard/Sweden/80127/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513662 A/mallard/Sweden/80114/2008 (A/H4N2) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513646 A/mallard/Sweden/80260/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513610 A/mallard/Sweden/80178/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI513565 A/mallard/Sweden/80299/2008 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI540196 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI513887 A/mallard/Sweden/79187/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513791 A/mallard/Sweden/79375/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513781 A/mallard/Sweden/80010/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513774 A/mallard/Sweden/80009/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513767 A/mallard/Sweden/79998/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513714 A/mallard/Sweden/80063/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513700 A/mallard/Sweden/80014/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513617 A/mallard/Sweden/80185/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI513581 A/mallard/Sweden/80389/2008 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI540252 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI221960 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3762.7 0.000000e+00 2202/2283 (96%) EPI221952 A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 1 (PB2) 3762.7 0.000000e+00 2202/2283 (96%) EPI372328 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 1 (PB2) 3759.1 0.000000e+00 2200/2282 (96%) EPI823912 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 1 (PB2) 3757.2 0.000000e+00 2138/2190 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4217.0 0.000000e+00 2283/2283 (100%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4172.7 0.000000e+00 2275/2283 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2269/2283 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2268/2283 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2268/2283 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2267/2283 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2265/2283 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4113.6 0.000000e+00 2264/2283 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4109.9 0.000000e+00 2263/2283 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4109.9 0.000000e+00 2263/2283 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2262/2283 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4093.3 0.000000e+00 2260/2284 (98%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3940.0 0.000000e+00 2234/2284 (97%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3940.0 0.000000e+00 2227/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3928.9 0.000000e+00 2231/2283 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3906.8 0.000000e+00 2228/2284 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3901.2 0.000000e+00 2227/2284 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3901.2 0.000000e+00 2227/2284 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3901.2 0.000000e+00 2227/2284 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3901.2 0.000000e+00 2222/2277 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3895.7 0.000000e+00 2221/2277 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3884.6 0.000000e+00 2219/2277 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3884.6 0.000000e+00 2219/2277 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3879.1 0.000000e+00 2223/2284 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3873.5 0.000000e+00 2221/2283 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3873.5 0.000000e+00 2217/2277 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2220/2283 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2220/2283 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3868.0 0.000000e+00 2212/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3862.5 0.000000e+00 2220/2284 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3862.5 0.000000e+00 2219/2283 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3855.1 0.000000e+00 2200/2257 (97%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3851.4 0.000000e+00 2217/2283 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3845.8 0.000000e+00 2217/2284 (97%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3840.3 0.000000e+00 2215/2283 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3834.8 0.000000e+00 2214/2283 (96%) EPI617772 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 2 (PB1) 3834.8 0.000000e+00 2214/2283 (96%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3834.8 0.000000e+00 2211/2278 (97%) EPI527629 A/common shelduck/Mongolia/2106/2011 (A/H3N8) segment 2 (PB1) 3834.8 0.000000e+00 2214/2283 (96%) EPI602453 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602446 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602432 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602425 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602408 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602401 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602387 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602373 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602348 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602341 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602334 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI602327 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599878 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599871 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599857 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599850 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599843 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI599829 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2210/2278 (97%) EPI372392 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI599836 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 2 (PB1) 3825.5 0.000000e+00 2209/2278 (96%) EPI704281 A/duck/Mongolia/118/2015 (A/H4N6) segment 2 (PB1) 3823.7 0.000000e+00 2212/2283 (96%) EPI602439 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2209/2278 (96%) EPI602394 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2209/2278 (96%) EPI599864 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 2 (PB1) 3818.1 0.000000e+00 2209/2279 (96%) EPI515123 A/duck/Vietnam/LBM533/2013 (A/H3N6) segment 2 (PB1) 3818.1 0.000000e+00 2211/2283 (96%) EPI372353 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%) EPI704378 A/duck/Mongolia/405/2015 (A/H3N6) segment 2 (PB1) 3807.1 0.000000e+00 2209/2283 (96%) EPI693712 A/duck/Mongolia/66/2015 (A/H10N2) segment 2 (PB1) 3807.1 0.000000e+00 2211/2285 (96%) EPI683152 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 2 (PB1) 3807.1 0.000000e+00 2208/2281 (96%) EPI527621 A/northern shoveler/Mongolia/899V/2009 (A/H3N6) segment 2 (PB1) 3807.1 0.000000e+00 2209/2283 (96%) EPI372400 A/shoveler/Egypt/01198-NAMRU3/2007 (A/H10N7) segment 2 (PB1) 3807.1 0.000000e+00 2203/2274 (96%) EPI692566 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 2 (PB1) 3801.5 0.000000e+00 2202/2274 (96%) EPI618509 A/mallard/Sweden/4932/2004 (A/H9N2) segment 2 (PB1) 3801.5 0.000000e+00 2208/2283 (96%) EPI401307 A/duck/Korea/DY104/2007 (A/H4N6) segment 2 (PB1) 3801.5 0.000000e+00 2208/2283 (96%) EPI372479 A/teal/Egypt/12908-NAMRU3/2005 (A/H10N1) segment 2 (PB1) 3801.5 0.000000e+00 2202/2274 (96%) EPI704542 A/duck/Mongolia/742/2015 (A/H10N7) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI704420 A/duck/Mongolia/655/2015 (A/H2N3) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI704386 A/duck/Mongolia/482/2015 (A/H2N3) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI704305 A/duck/Mongolia/154/2015 (A/H0N2) segment 2 (PB1) 3796.0 0.000000e+00 2209/2285 (96%) EPI618255 A/mallard/Sweden/79196/2008 (A/H0) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI600151 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 2 (PB1) 3796.0 0.000000e+00 2204/2278 (96%) EPI513699 A/mallard/Sweden/80014/2008 (A/H4N6) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI285821 A/avian/Egypt/920431/2006 (A/H9N2) segment 2 (PB1) 3796.0 0.000000e+00 2207/2283 (96%) EPI269009 A/duck/Hunan/491/2005 (A/H6N2) segment 2 (PB1) 3796.0 0.000000e+00 2203/2277 (96%) EPI683126 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 2 (PB1) 3790.4 0.000000e+00 2205/2281 (96%) EPI683125 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 2 (PB1) 3790.4 0.000000e+00 2206/2283 (96%) EPI469402 A/northern shoveler/Hong Kong/MPC657/2006 (A/H10N9) segment 2 (PB1) 3790.4 0.000000e+00 2203/2278 (96%) EPI372487 A/garganey/Ukraine/05834-NAMRU3/2006 (A/H10N9) segment 2 (PB1) 3790.4 0.000000e+00 2200/2274 (96%) EPI540301 A/duck/Bangladesh/1800/2010 (A/H3N6) segment 2 (PB1) 3784.9 0.000000e+00 2199/2274 (96%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858843 A/painted stork/India/10CA03/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3762.7 0.000000e+00 2113/2151 (98%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI262643 A/aquatic bird/Korea/w79/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI118321 A/duck/Jiang Xi/1850/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI268977 A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI262644 A/aquatic bird/Korea/w81/2005 (A/H5N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI118337 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI387412 A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI363534 A/duck/Guizhou/2773/2006 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI335409 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI326817 A/environment/Korea/CSM05/2004 (A/H3N1) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI296253 A/wild duck/Korea/CW09/2005 (A/H1N1) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI268960 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI837836 A/environment/Korea/W267/2007 (A/H7N4) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI717886 A/environment/Hubei-Jinzhou/02/2010 (A/H6N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI599172 A/migratory duck/Jiangxi/21248/2009 (A/H10N8) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI387502 A/canvasback/Mongolia/2-69/2007 (A/H10) segment 3 (PA) 3701.8 0.000000e+00 2100/2148 (97%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%) EPI307313 A/aquatic bird/Korea/MA81/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI307311 A/mallard duck/Korea/6L/2007 (A/H7N6) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI262663 A/aquatic bird/Korea/w222/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI258967 A/aquatic bird/Korea/w164/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI258966 A/aquatic bird/Korea/w163/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI131894 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI69246 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI774513 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI687186 A/chicken/Scotland/532/2016 (A/H5N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI540395 A/duck/Bangladesh/1293/2008 (A/H6N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI268979 A/duck/Hunan/3748/2004 (A/H6N8) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI268962 A/duck/Guangxi/1455/2004 (A/H6N5) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI540323 A/duck/Bangladesh/1575/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI540315 A/duck/Bangladesh/1576/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI540307 A/duck/Bangladesh/1574/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI363890 A/duck/Guangxi/1330/2007 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI363882 A/duck/Guangxi/890/2007 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI307308 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI268961 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262667 A/aquatic bird/Korea/w234/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262666 A/aquatic bird/Korea/w231/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI258965 A/aquatic bird/Korea/w161/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI244497 A/mallard/Korea/GH170/2007 (A/H7N7) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI387406 A/whooper swan/Mongolia/1-25/2007 (A/H3N8) segment 3 (PA) 3688.9 0.000000e+00 2097/2147 (97%) EPI599169 A/migratory duck/Jiangxi/593/2005 (A/H10N8) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI361728 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 3 (PA) 3685.2 0.000000e+00 2097/2148 (97%) EPI307312 A/aquatic bird/Korea/MA44/2007 (A/H7N3) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI268981 A/duck/Hunan/1469/2002 (A/H6N8) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262658 A/aquatic bird/Korea/w211/2007 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262657 A/aquatic bird/Korea/w208/2007 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI182382 A/Baikal Teal/Hongze/14/2005 (A/H11N9) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI692375 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI599168 A/duck/Jiangxi/2039/2005 (A/H10N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI487606 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI401299 A/wild duck/Korea/CSM20-5/2009 (A/H4N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI268958 A/duck/Hunan/748/2005 (A/H6N5) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI262660 A/aquatic bird/Korea/w217/2007 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI262656 A/aquatic bird/Korea/w206/2007 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI244544 A/mallard/Korea/GH171/2007 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI244507 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI180351 A/duck/Primorie/2621/01 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI262654 A/aquatic bird/Korea/w204/2007 (A/H5N2) segment 3 (PA) 3676.0 0.000000e+00 2097/2151 (97%) EPI837826 A/environment/Korea/W109/2006 (A/H7N7) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI774986 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI599149 A/migratory duck/Jiangxi/9334/2005 (A/H10N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568314 A/duck/Jiangxi/501/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568311 A/duck/Jiangxi/468/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568308 A/duck/Jiangxi/422/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568305 A/duck/Jiangxi/386/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568267 A/duck/Jiangxi/302/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568264 A/duck/Jiangxi/13946/2005 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI540291 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI538411 A/common teal/Mongolia/2273/2011 (A/H6N6) segment 3 (PA) 3674.1 0.000000e+00 2091/2142 (97%) EPI533885 A/duck/Guangxi/125D17/2012 (A/H4N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI439067 A/domestic green-winged teal/Hunan/3450/2006 (A/H5N1) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI438280 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI363898 A/duck/Guangxi/1533/2007 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2099/2153 (97%) EPI363694 A/duck/Taiwan/DV30-2/2005 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI315047 A/duck/Vietnam/G119/2006 (A/H3N8) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858845 A/painted stork/India/10CA03/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI718527 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI809357 A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%) EPI809373 A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 5 (NP) 2627.1 0.000000e+00 1473/1498 (98%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2597.5 0.000000e+00 1466/1496 (97%) EPI774515 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2590.1 0.000000e+00 1465/1497 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2586.4 0.000000e+00 1464/1496 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2586.4 0.000000e+00 1464/1496 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2584.6 0.000000e+00 1464/1497 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI806631 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470441 A/wild waterfowl/Hong Kong/MPM2121/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470440 A/wild waterfowl/Hong Kong/MPL705/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470438 A/common teal/Hong Kong/MPL634/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470436 A/common teal/Hong Kong/MPM1645/2011 (A/H7N1) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470377 A/wild duck/Jiangxi/19831/2009 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI704308 A/duck/Mongolia/154/2015 (A/H0N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI693715 A/duck/Mongolia/66/2015 (A/H10N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI510819 A/duck/Taiwan/11213/2013 (A/H5N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI470439 A/common teal/Hong Kong/MPM1740/2011 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI470437 A/common teal/Hong Kong/MPM1670/2011 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI392508 A/pintail/Korea/1173/09 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690785 A/goose/Taiwan/TNO20/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690753 A/goose/Taiwan/TNO16/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690745 A/goose/Taiwan/TNO15/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690697 A/goose/Taiwan/TNO9/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690673 A/goose/Taiwan/TNO6/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690657 A/goose/Taiwan/TNO4/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690641 A/goose/Taiwan/TNO2/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690601 A/goose/Taiwan/TNC11/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690553 A/goose/Taiwan/TNC5/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690545 A/goose/Taiwan/TNC4/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI583947 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI470442 A/wild waterfowl/Hong Kong/MPL1006/2011 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI470431 A/wild waterfowl/Hong Kong/MPL696/2011 (A/H2N9) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI470411 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI601684 A/duck/Jiangxi/3961/2013 (A/H0) segment 5 (NP) 2558.7 0.000000e+00 1445/1475 (97%) EPI823774 A/pintail/Chany Lake/37/2012 (A/H3N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602448 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602441 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602403 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602396 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602389 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602382 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602375 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602368 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602343 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602336 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI602329 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI599873 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 3, 2016 Author Report Share Posted December 3, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1500.6 0.000000e+00 812/812 (100%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 808/812 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 805/812 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 805/812 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 803/812 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 803/812 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 803/812 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 803/812 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 801/812 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1447.0 0.000000e+00 802/812 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 803/813 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 801/813 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 800/813 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 799/813 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1423.0 0.000000e+00 799/813 (98%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 798/813 (98%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 798/814 (98%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 797/813 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 798/814 (98%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 796/813 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1400.9 0.000000e+00 795/813 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1400.9 0.000000e+00 795/813 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1378.7 0.000000e+00 791/813 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1378.7 0.000000e+00 791/813 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1378.7 0.000000e+00 791/813 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1373.2 0.000000e+00 791/814 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1373.2 0.000000e+00 791/814 (97%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1367.6 0.000000e+00 789/813 (97%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1367.6 0.000000e+00 789/813 (97%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1367.6 0.000000e+00 789/813 (97%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI363934 A/duck/Guizhou/1560/2007 (A/H6N8) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI314535 A/avian/Japan/8KI0184/2008 (A/H4N6) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI299262 A/avian/Japan/8KI0185/2008 (A/H4N6) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI299254 A/avian/Japan/8KI0195/2008 (A/H6N8) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI284654 A/duck/Hunan/8-19/2009 (A/H4N2) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI268628 A/duck/Fujian/12035/2005 (A/H6N6) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI230017 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 8 (NS) 1362.1 0.000000e+00 788/813 (96%) EPI262750 A/aquatic bird/Korea/w209/2007 (A/H5N3) segment 8 (NS) 1360.3 0.000000e+00 787/812 (96%) EPI461791 A/environment/Hunan/S11511/2012 (A/H4N9) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI446518 A/environment/Jiangxi/26/2009 (A/H11N9) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI420071 A/mallard/California/2578V/2011 (A/H0) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI419907 A/mallard/California/2552V/2011 (A/H4N8) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1356.6 0.000000e+00 788/814 (96%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1356.6 0.000000e+00 788/814 (96%) EPI387819 A/mallard/Korea/1203/2010 (A/H10N8) segment 8 (NS) 1356.6 0.000000e+00 788/814 (96%) EPI387818 A/mallard/Korea/1041/2010 (A/H10N8) segment 8 (NS) 1356.6 0.000000e+00 788/814 (96%) EPI314207 A/wild duck/Taiwan/WB1364/2007 (A/H4N6) segment 8 (NS) 1356.6 0.000000e+00 787/813 (96%) EPI837810 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI692476 A/duck/Henan/S4179/2009 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI589175 A/duck/China/J1/2012 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI540193 A/duck/Bangladesh/1753/2010 (A/H11N3) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI508167 A/wild duck/Korea/CSM27-12/2009 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI504039 A/wild duck/SH17-1/2008 (A/H2N3) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI420126 A/mallard/California/2594V/2011 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI420119 A/mallard/California/2594P/2011 (A/H4N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI392649 A/pintail/Korea/1173/09 (A/H7N7) segment 8 (NS) 1351.0 0.000000e+00 787/814 (96%) EPI384049 A/duck/Thailand/CU-LM7288T/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI384039 A/duck/Thailand/CU-LM7288C/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI384017 A/duck/Thailand/CU-LM7283C/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI383995 A/duck/Thailand/CU-LM7283T/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI383983 A/duck/Thailand/CU-LM7285C/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI383953 A/duck/Thailand/CU-LM7280C/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI383937 A/duck/Thailand/CU-LM7284C/2010 (A/H7N6) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI276132 A/pintail/Akita/1364/2008 (A/H1N2) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI276127 A/pintail/Akita/1353/2008 (A/H1N2) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI118253 A/migratory duck/Hong Kong/MP2553/2003 (A/H8N4) segment 8 (NS) 1351.0 0.000000e+00 786/813 (96%) EPI760217 A/duck/Hunan/161/2015 (A/H3N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI470632 A/duck/Jiangxi/22041/2008 (A/H4N9) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI439096 A/chicken/Taiwan/TC149/2010 (A/H4) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419937 A/mallard/California/2555V/2011 (A/H11N9) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419819 A/mallard/California/2533V/2011 (A/H4N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI419777 A/mallard/California/2525P/2011 (A/H4N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI418438 A/mallard/California/2525V/2011 (A/H0) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI392652 A/mallard/Korea/822/10 (A/H7N7) segment 8 (NS) 1345.5 0.000000e+00 786/814 (96%) EPI389736 A/duck/Eastern China/318/2003 (A/H11) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI383969 A/duck/Thailand/CU-LM7279T/2010 (A/H7N6) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI296191 A/wild duck/Korea/YS44/2004 (A/H1N2) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) EPI276122 A/pintail/Akita/1265/2008 (A/H1N2) segment 8 (NS) 1345.5 0.000000e+00 785/813 (96%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1667/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1666/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1662/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1657/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2883.7 0.000000e+00 1593/1609 (99%) EPI593747 A/goose/Shandong/k1201/2009 (A/H5N1) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703594 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1654/1704 (97%) EPI643147 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 4 (HA) 2865.3 0.000000e+00 1651/1707 (96% Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1401/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1401/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1398/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1398/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1397/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1400/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1399/1407 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1394/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2520.0 0.000000e+00 1392/1406 (99%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2486.7 0.000000e+00 1386/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2475.6 0.000000e+00 1384/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2453.5 0.000000e+00 1380/1406 (98%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2442.4 0.000000e+00 1378/1406 (98%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2436.9 0.000000e+00 1377/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1377/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1376/1407 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2407.3 0.000000e+00 1353/1378 (98%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2370.4 0.000000e+00 1360/1398 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1354/1394 (97%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1355/1395 (97%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2348.2 0.000000e+00 1362/1407 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1360/1406 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI703639 A/goose/Eastern China/L1204/2012 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI703637 A/goose/Eastern China/L1214/2012 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1746.2 0.000000e+00 967/978 (98%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 969/982 (98%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 968/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 968/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1725.9 0.000000e+00 967/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI372429 A/shoveler/Egypt/00004-NAMRU3/2007 (A/H10N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI372421 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI363933 A/duck/Guizhou/1560/2007 (A/H6N8) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1677.9 0.000000e+00 957/982 (97%) EPI841782 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI514029 A/mallard/Sweden/68575/2007 (A/H4N6) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI439562 A/avian/Israel/824/2005 (A/H10N2) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI248496 A/mallard/Germany-RP/R193/09 (A/H1N1) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI190341 A/mallard/Netherlands/1/2006 (A/H8N4) segment 7 (MP) 1676.0 0.000000e+00 957/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI619262 A/mallard/Sweden/60041/2007 (A/H8N2) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1670.5 0.000000e+00 956/982 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 4178.2 0.000000e+00 2274/2280 (99%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 4156.1 0.000000e+00 2270/2280 (99%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 4156.1 0.000000e+00 2270/2280 (99%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 4133.9 0.000000e+00 2266/2280 (99%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 4128.4 0.000000e+00 2265/2280 (99%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 4128.4 0.000000e+00 2266/2281 (99%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 4128.4 0.000000e+00 2265/2280 (99%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 4017.6 0.000000e+00 2245/2280 (98%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 4012.0 0.000000e+00 2244/2280 (98%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3978.8 0.000000e+00 2238/2280 (98%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3928.9 0.000000e+00 2231/2282 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3923.4 0.000000e+00 2228/2280 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3901.2 0.000000e+00 2225/2281 (97%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3901.2 0.000000e+00 2225/2281 (97%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3862.5 0.000000e+00 2217/2280 (97%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 3853.2 0.000000e+00 2215/2280 (97%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3845.8 0.000000e+00 2214/2280 (97%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 3831.1 0.000000e+00 2211/2280 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI527565 A/ruddy shelduck/Mongolia/1189/2010 (A/H7N1) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3829.2 0.000000e+00 2211/2280 (96%) EPI222084 A/garganey/Altai/1213/2007 (A/H5N2) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96% Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2261/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2261/2275 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4093.3 0.000000e+00 2254/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4093.3 0.000000e+00 2254/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2253/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4076.7 0.000000e+00 2251/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3940.0 0.000000e+00 2227/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3923.4 0.000000e+00 2225/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3912.3 0.000000e+00 2222/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3868.0 0.000000e+00 2212/2271 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3855.1 0.000000e+00 2200/2257 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3851.4 0.000000e+00 2211/2274 (97%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3840.3 0.000000e+00 2210/2275 (97%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3829.2 0.000000e+00 2208/2275 (97%) EPI602380 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 2 (PB1) 3829.2 0.000000e+00 2208/2275 (97%) EPI372392 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%) EPI602453 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602446 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI602432 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858843 A/painted stork/India/10CA03/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3762.7 0.000000e+00 2113/2151 (98%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI262643 A/aquatic bird/Korea/w79/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI118321 A/duck/Jiang Xi/1850/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI268977 A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI262644 A/aquatic bird/Korea/w81/2005 (A/H5N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI118337 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI387412 A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI363534 A/duck/Guizhou/2773/2006 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI335409 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI326817 A/environment/Korea/CSM05/2004 (A/H3N1) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI296253 A/wild duck/Korea/CW09/2005 (A/H1N1) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI268960 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI837836 A/environment/Korea/W267/2007 (A/H7N4) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI717886 A/environment/Hubei-Jinzhou/02/2010 (A/H6N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI599172 A/migratory duck/Jiangxi/21248/2009 (A/H10N8) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI387502 A/canvasback/Mongolia/2-69/2007 (A/H10) segment 3 (PA) 3701.8 0.000000e+00 2100/2148 (97%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%) EPI307313 A/aquatic bird/Korea/MA81/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI307311 A/mallard duck/Korea/6L/2007 (A/H7N6) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI262663 A/aquatic bird/Korea/w222/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI258967 A/aquatic bird/Korea/w164/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI258966 A/aquatic bird/Korea/w163/2007 (A/H5N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI131894 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI69246 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI774513 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI687186 A/chicken/Scotland/532/2016 (A/H5N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI540395 A/duck/Bangladesh/1293/2008 (A/H6N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI268979 A/duck/Hunan/3748/2004 (A/H6N8) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI268962 A/duck/Guangxi/1455/2004 (A/H6N5) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI540323 A/duck/Bangladesh/1575/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI540315 A/duck/Bangladesh/1576/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI540307 A/duck/Bangladesh/1574/2009 (A/H3N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI363890 A/duck/Guangxi/1330/2007 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI363882 A/duck/Guangxi/890/2007 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI307308 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI268961 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262667 A/aquatic bird/Korea/w234/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262666 A/aquatic bird/Korea/w231/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI258965 A/aquatic bird/Korea/w161/2007 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI244497 A/mallard/Korea/GH170/2007 (A/H7N7) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI387406 A/whooper swan/Mongolia/1-25/2007 (A/H3N8) segment 3 (PA) 3688.9 0.000000e+00 2097/2147 (97%) EPI599169 A/migratory duck/Jiangxi/593/2005 (A/H10N8) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI361728 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 3 (PA) 3685.2 0.000000e+00 2097/2148 (97%) EPI307312 A/aquatic bird/Korea/MA44/2007 (A/H7N3) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI268981 A/duck/Hunan/1469/2002 (A/H6N8) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262658 A/aquatic bird/Korea/w211/2007 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262657 A/aquatic bird/Korea/w208/2007 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI182382 A/Baikal Teal/Hongze/14/2005 (A/H11N9) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI692375 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI599168 A/duck/Jiangxi/2039/2005 (A/H10N8) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI487606 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI401299 A/wild duck/Korea/CSM20-5/2009 (A/H4N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI268958 A/duck/Hunan/748/2005 (A/H6N5) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI262660 A/aquatic bird/Korea/w217/2007 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI262656 A/aquatic bird/Korea/w206/2007 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI244544 A/mallard/Korea/GH171/2007 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI244507 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI180351 A/duck/Primorie/2621/01 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI262654 A/aquatic bird/Korea/w204/2007 (A/H5N2) segment 3 (PA) 3676.0 0.000000e+00 2097/2151 (97%) EPI837826 A/environment/Korea/W109/2006 (A/H7N7) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI774986 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI599149 A/migratory duck/Jiangxi/9334/2005 (A/H10N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568314 A/duck/Jiangxi/501/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568311 A/duck/Jiangxi/468/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568308 A/duck/Jiangxi/422/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568305 A/duck/Jiangxi/386/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568267 A/duck/Jiangxi/302/2006 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI568264 A/duck/Jiangxi/13946/2005 (A/H10N3) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI540291 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI538411 A/common teal/Mongolia/2273/2011 (A/H6N6) segment 3 (PA) 3674.1 0.000000e+00 2091/2142 (97%) EPI533885 A/duck/Guangxi/125D17/2012 (A/H4N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI439067 A/domestic green-winged teal/Hunan/3450/2006 (A/H5N1) segment 3 (PA) 3674.1 0.000000e+00 2098/2152 (97%) EPI438280 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI363898 A/duck/Guangxi/1533/2007 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2099/2153 (97%) EPI363694 A/duck/Taiwan/DV30-2/2005 (A/H5N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858845 A/painted stork/India/10CA03/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%) EPI718527 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%) EPI809357 A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%) EPI809373 A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 5 (NP) 2627.1 0.000000e+00 1473/1498 (98%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1469/1497 (98%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2604.9 0.000000e+00 1468/1497 (98%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2597.5 0.000000e+00 1466/1496 (97%) EPI774515 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2590.1 0.000000e+00 1465/1497 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2586.4 0.000000e+00 1464/1496 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2586.4 0.000000e+00 1464/1496 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2584.6 0.000000e+00 1464/1497 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI806631 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI664214 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2577.2 0.000000e+00 1463/1497 (97%) EPI774476 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774387 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774311 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774303 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774260 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774186 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774169 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774160 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774122 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774114 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470441 A/wild waterfowl/Hong Kong/MPM2121/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470440 A/wild waterfowl/Hong Kong/MPL705/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470438 A/common teal/Hong Kong/MPL634/2011 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470436 A/common teal/Hong Kong/MPM1645/2011 (A/H7N1) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI470377 A/wild duck/Jiangxi/19831/2009 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI774507 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI774467 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI774395 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%) EPI774252 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI774243 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI774177 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI774151 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI704308 A/duck/Mongolia/154/2015 (A/H0N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI693715 A/duck/Mongolia/66/2015 (A/H10N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI510819 A/duck/Taiwan/11213/2013 (A/H5N2) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI470439 A/common teal/Hong Kong/MPM1740/2011 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI470437 A/common teal/Hong Kong/MPM1670/2011 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI392508 A/pintail/Korea/1173/09 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690785 A/goose/Taiwan/TNO20/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690753 A/goose/Taiwan/TNO16/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690745 A/goose/Taiwan/TNO15/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690697 A/goose/Taiwan/TNO9/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690673 A/goose/Taiwan/TNO6/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690657 A/goose/Taiwan/TNO4/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690641 A/goose/Taiwan/TNO2/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690601 A/goose/Taiwan/TNC11/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690553 A/goose/Taiwan/TNC5/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI690545 A/goose/Taiwan/TNC4/2015 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) Link to comment Share on other sites More sharing options...
niman Posted December 17, 2016 Author Report Share Posted December 17, 2016 Align Segment-ID Name Score E-Value Identity EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 825/829 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 819/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 819/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 819/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 819/823 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 818/823 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 813/820 (99%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1469.2 0.000000e+00 812/823 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 811/820 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 811/820 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 811/820 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 811/820 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 810/820 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1461.8 0.000000e+00 812/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1450.7 0.000000e+00 810/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 810/824 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1439.7 0.000000e+00 808/822 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 814/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1434.1 0.000000e+00 807/822 (98%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 806/821 (98%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 806/821 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 807/823 (98%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 807/824 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1426.7 0.000000e+00 805/821 (98%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 805/822 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 805/822 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1408.3 0.000000e+00 807/829 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 802/822 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 801/822 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1399.0 0.000000e+00 802/824 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1399.0 0.000000e+00 802/824 (97%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1397.2 0.000000e+00 805/829 (97%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1397.2 0.000000e+00 805/829 (97%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI392651 A/wild bird/Korea/A330/09 (A/H7N7) segment 8 (NS) 1391.6 0.000000e+00 805/830 (96%) EPI392650 A/wild bird/Korea/A331/09 (A/H7N7) segment 8 (NS) 1391.6 0.000000e+00 805/830 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) EPI387496 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 8 (NS) 1391.6 0.000000e+00 804/829 (96%) Link to comment Share on other sites More sharing options...
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