niman Posted December 26, 2016 Report Posted December 26, 2016 French Agency for Food, Environmental and Occupational Health has released two sets of sequences from a duck from Nord-Pas-De Calais.
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Isolate name: A/decoy_duck/France/161104e/2016 Isolate ID: EPI_ISL_239997 Passage details/history: field sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-26 Host Duck Additional host information: Domestic status: Is vaccinated: Location: France / Region Nord-Pas-De Calais / Departement du Pas-de-Calais Additional location information: Health status: Specimen source: Tracheal swab Strain or commercial product name used for vaccination: Institute information Originating lab: Anses (Ploufragan-Plouzané) Sample ID given by the sample provider: Address: Anses (Ploufragan-Plouzané) Rue de Beaucemaine 22440 Ploufragan France Submitting lab: French Agency for Food, Environmental and Occupational Health Sample ID given by the submitting laboratory: Authors: Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/decoy_duck/France/161104e/2016 2280 EPI869684 PB2 A/duck/France/161108h/2016 2341 EPI869676 PB1 A/decoy_duck/France/161104e/2016 2297 EPI869685 PB1 A/duck/France/161108h/2016 2297 EPI869677 PA A/duck/France/161108h/2016 2228 EPI869678 PA A/decoy_duck/France/161104e/2016 2151 EPI869686 HA A/duck/France/161108h/2016 1772 EPI869679 HA A/decoy_duck/France/161104e/2016 1704 EPI869687 NP A/duck/France/161108h/2016 1565 EPI869680 NP A/decoy_duck/France/161104e/2016 1463 EPI869688 NA A/decoy_duck/France/161104e/2016 1411 EPI869689 NA A/duck/France/161108h/2016 1413 EPI869681 MP A/duck/France/161108h/2016 982 EPI869682 MP A/decoy_duck/France/161104e/2016 982 EPI869690 NS A/duck/France/161108h/2016 882 EPI869683 NS A/decoy_duck/France/161104e/2016 835 EPI869691 Submitter information Submitter: Briand, Francois-Xavier Submission Date: 2016-12-26 Last modifier: Briand, Francois-Xavier Last modified: 2016-12-26 Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Align Segment-ID Name Score E-Value Identity EPI869679 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3136.7 0.000000e+00 1702/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2970.5 0.000000e+00 1672/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2959.5 0.000000e+00 1670/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2948.4 0.000000e+00 1668/1704 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2937.3 0.000000e+00 1666/1704 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2926.2 0.000000e+00 1664/1704 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1664/1705 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2920.7 0.000000e+00 1663/1704 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2915.1 0.000000e+00 1662/1704 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1598/1609 (99%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2911.4 0.000000e+00 1660/1702 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1662/1705 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2909.6 0.000000e+00 1661/1704 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2904.1 0.000000e+00 1660/1704 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2898.5 0.000000e+00 1660/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2893.0 0.000000e+00 1658/1704 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2887.4 0.000000e+00 1658/1705 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2881.9 0.000000e+00 1656/1704 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1655/1704 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2876.4 0.000000e+00 1656/1705 (97%)
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Align Segment-ID Name Score E-Value Identity EPI869681 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2549.5 0.000000e+00 1397/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1396/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2503.3 0.000000e+00 1389/1406 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2470.1 0.000000e+00 1383/1406 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1381/1406 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2436.9 0.000000e+00 1377/1406 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1374/1407 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1373/1406 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1372/1406 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1373/1407 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1371/1406 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1370/1406 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1371/1407 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1369/1406 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2390.7 0.000000e+00 1350/1378 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1368/1406 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1368/1407 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1367/1406 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1366/1406 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1357/1398 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1351/1394 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1359/1406 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1352/1395 (96%) EPI718279 A/ostrich/Korea/H829/2014 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1358/1406 (96%)
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Align Segment-ID Name Score E-Value Identity EPI869682 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1796.1 0.000000e+00 976/978 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1783.1 0.000000e+00 976/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 973/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1698.2 0.000000e+00 961/982 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1694.5 0.000000e+00 960/982 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Align Segment-ID Name Score E-Value Identity EPI869676 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3917.9 0.000000e+00 2227/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3917.9 0.000000e+00 2227/2280 (97%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3884.6 0.000000e+00 2221/2280 (97%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI588965 A/chicken/Taiwan/a174/2015 (A/H5N3) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI588973 A/duck/Taiwan/a068/2015 (A/H5N8) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3812.6 0.000000e+00 2208/2280 (96%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI750185 A/goose/Taiwan/01042/2015 (A/H5N3) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI750111 A/duck/Taiwan/A3400/2015 (A/H5N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3784.9 0.000000e+00 2203/2280 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3773.8 0.000000e+00 2201/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3773.8 0.000000e+00 2183/2253 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2201/2281 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3762.7 0.000000e+00 2200/2281 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3751.7 0.000000e+00 2197/2280 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3749.8 0.000000e+00 2184/2261 (96%) EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3742.4 0.000000e+00 2195/2280 (96%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3742.4 0.000000e+00 2195/2280 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3742.4 0.000000e+00 2175/2249 (96%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3740.6 0.000000e+00 2195/2280 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3740.6 0.000000e+00 2197/2282 (96%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3735.0 0.000000e+00 2193/2280 (96%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3735.0 0.000000e+00 2194/2280 (96%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3733.2 0.000000e+00 2181/2261 (96%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3729.5 0.000000e+00 2194/2281 (96%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3720.3 0.000000e+00 2164/2239 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3718.4 0.000000e+00 2192/2281 (96%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3712.9 0.000000e+00 2191/2281 (96%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3709.2 0.000000e+00 2176/2259 (96%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3707.3 0.000000e+00 2191/2282 (96%) EPI372383 A/teal/Egypt/13203-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3701.8 0.000000e+00 2190/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3696.3 0.000000e+00 2189/2282 (95%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2188/2281 (95%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3690.7 0.000000e+00 2186/2280 (95%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3690.7 0.000000e+00 2187/2281 (95%) EPI372296 A/teal/Egypt/00688-NAMRU3/2004 (A/H11N9) segment 1 (PB2) 3690.7 0.000000e+00 2188/2282 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3690.7 0.000000e+00 2187/2281 (95%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3685.2 0.000000e+00 2187/2282 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3679.6 0.000000e+00 2186/2282 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3674.1 0.000000e+00 2185/2282 (95%) EPI618544 A/mallard/Sweden/101754/2009 (A/H0) segment 1 (PB2) 3668.6 0.000000e+00 2184/2282 (95%) EPI514604 A/mallard/Sweden/50108/2006 (A/H4N6) segment 1 (PB2) 3668.6 0.000000e+00 2183/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3668.6 0.000000e+00 2184/2282 (95%) EPI618253 A/mallard/Sweden/79390/2008 (A/H11N9) segment 1 (PB2) 3663.0 0.000000e+00 2183/2282 (95%) EPI310338 A/duck/Zambia/04/2008 (A/H3N8) segment 1 (PB2) 3663.0 0.000000e+00 2183/2282 (95%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3657.5 0.000000e+00 2180/2280 (95%) EPI372320 A/shoveler/Egypt/09864-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3657.5 0.000000e+00 2182/2282 (95%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3651.9 0.000000e+00 2179/2280 (95%)
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Align Segment-ID Name Score E-Value Identity EPI869677 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2264/2271 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4135.8 0.000000e+00 2262/2274 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4122.8 0.000000e+00 2260/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2260/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4117.3 0.000000e+00 2259/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4071.1 0.000000e+00 2250/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3906.8 0.000000e+00 2222/2275 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3895.7 0.000000e+00 2220/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3895.7 0.000000e+00 2219/2274 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3890.2 0.000000e+00 2218/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3884.6 0.000000e+00 2217/2274 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3875.4 0.000000e+00 2212/2269 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3856.9 0.000000e+00 2213/2275 (97%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3855.1 0.000000e+00 2200/2257 (97%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3845.8 0.000000e+00 2211/2275 (97%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3840.3 0.000000e+00 2209/2274 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3834.8 0.000000e+00 2209/2275 (97%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%
niman Posted December 26, 2016 Author Report Posted December 26, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI869678 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3923.4 0.000000e+00 2140/2148 (99%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3834.8 0.000000e+00 2126/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3790.4 0.000000e+00 2119/2152 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3735.0 0.000000e+00 2110/2153 (98%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3696.3 0.000000e+00 2102/2152 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3635.3 0.000000e+00 2091/2152 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3629.8 0.000000e+00 2089/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3579.9 0.000000e+00 2080/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3574.4 0.000000e+00 2079/2151 (96%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3552.2 0.000000e+00 2075/2151 (96%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3546.7 0.000000e+00 2075/2152 (96%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3144.1 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3110.9 0.000000e+00 1697/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI869679 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1693/1705 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1688/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1669/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2944.7 0.000000e+00 1668/1705 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1602/1609 (99%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2928.1 0.000000e+00 1665/1705 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1664/1705 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1662/1706 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2900.4 0.000000e+00 1660/1705 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2896.7 0.000000e+00 1658/1703 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2894.8 0.000000e+00 1660/1706 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2883.7 0.000000e+00 1658/1706 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2878.2 0.000000e+00 1656/1705 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1655/1705 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1656/1706 (97%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869681 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2503.3 0.000000e+00 1390/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2470.1 0.000000e+00 1385/1408 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1383/1408 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2436.9 0.000000e+00 1379/1408 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1377/1408 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1376/1408 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1376/1409 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1375/1409 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1371/1408 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1372/1409 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2390.7 0.000000e+00 1352/1380 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1370/1409 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1359/1400 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1354/1397 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1361/1409 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1359/1408 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI869682 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1779.4 0.000000e+00 973/978 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1703.7 0.000000e+00 963/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1689.0 0.000000e+00 960/983 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4135.8 0.000000e+00 2266/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3956.6 0.000000e+00 2235/2281 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3940.0 0.000000e+00 2232/2281 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3928.9 0.000000e+00 2230/2281 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3906.8 0.000000e+00 2226/2281 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3884.6 0.000000e+00 2222/2281 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3879.1 0.000000e+00 2221/2281 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3856.9 0.000000e+00 2218/2282 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3851.4 0.000000e+00 2217/2282 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2216/2282 (97%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3796.0 0.000000e+00 2208/2283 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2206/2282 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2205/2282 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2202/2283 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4152.4 0.000000e+00 2265/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4146.8 0.000000e+00 2264/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI869677 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2259/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4119.1 0.000000e+00 2257/2271 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2255/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2245/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3897.6 0.000000e+00 2220/2275 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3892.0 0.000000e+00 2219/2275 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3869.9 0.000000e+00 2216/2276 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3869.9 0.000000e+00 2215/2275 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3864.3 0.000000e+00 2214/2275 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2214/2276 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3847.7 0.000000e+00 2211/2275 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3836.6 0.000000e+00 2207/2272 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3836.6 0.000000e+00 2209/2275 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3814.5 0.000000e+00 2205/2275 (96%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3812.6 0.000000e+00 2193/2258 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3808.9 0.000000e+00 2204/2275 (96%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2204/2276 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869686 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI868847 A/turkey/England/052131/2016 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI860235 A/wild duck/Poland/82A/2016 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI863848 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 3 (PA) 3941.9 0.000000e+00 2145/2151 (99%) EPI863864 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI863833 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2144/2151 (99%) EPI863825 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 3 (PA) 3938.2 0.000000e+00 2144/2151 (99%) EPI863856 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 3 (PA) 3930.8 0.000000e+00 2142/2151 (99%) EPI614265 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%) EPI446529 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA) 3685.2 0.000000e+00 2100/2152 (97%) EPI596393 A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI441050 A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI418270 A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA) 3663.0 0.000000e+00 2096/2152 (97%) EPI538458 A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA) 3661.2 0.000000e+00 2079/2127 (97%) EPI692479 A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA) 3646.4 0.000000e+00 2095/2154 (97%) EPI598436 A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598434 A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598433 A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598431 A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598430 A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598428 A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598425 A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598424 A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598423 A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598364 A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598362 A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598361 A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598358 A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%) EPI598432 A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598429 A/duck/Jiangxi/6584/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598427 A/duck/Jiangxi/6556/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598426 A/duck/Jiangxi/6547/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598422 A/duck/Jiangxi/6505/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI598363 A/duck/Jiangxi/6487/2013 (A/H10N8) segment 3 (PA) 3640.9 0.000000e+00 2092/2152 (97%) EPI596484 A/duck/Vietnam/LBM553/2013 (A/H3N8) segment 3 (PA) 3635.3 0.000000e+00 2092/2153 (97%) EPI534727 A/duck/Zhejiang/4637/2013 (A/H3N2) segment 3 (PA) 3635.3 0.000000e+00 2071/2122 (97%) EPI336009 A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA) 3635.3 0.000000e+00 2090/2151 (97%) EPI534730 A/duck/Zhejiang/4625/2013 (A/H3N2) segment 3 (PA) 3633.5 0.000000e+00 2070/2121 (97%) EPI704339 A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI704322 A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI577205 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476086 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476085 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI475922 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA) 3629.8 0.000000e+00 2090/2152 (97%) EPI476088 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476087 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI476065 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475923 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI475921 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI753580 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 3 (PA) 3618.7 0.000000e+00 2088/2152 (97%) EPI461625 A/duck/Hunan/S11893/2012 (A/H4N6) segment 3 (PA) 3618.7 0.000000e+00 2087/2151 (97%) EPI845253 A/environment/Sichuan/315068/2015 (A/H6N2) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI475919 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA) 3613.2 0.000000e+00 2087/2152 (96%) EPI845260 A/environment/Sichuan/315069/2015 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI841762 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI542399 A/muscovy duck/Vietnam/LBM687/2014 (A/H4N6) segment 3 (PA) 3607.6 0.000000e+00 2086/2152 (96%) EPI222086 A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA) 3607.6 0.000000e+00 2085/2151 (96%) EPI222046 A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA) 3607.6 0.000000e+00 2085/2151 (96%) EPI387543 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA) 3602.1 0.000000e+00 2066/2124 (97%) EPI538449 A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA) 3594.7 0.000000e+00 2066/2126 (97%) EPI534726 A/duck/Zhejiang/4613/2013 (A/H3N2) segment 3 (PA) 3592.9 0.000000e+00 2051/2103 (97%) EPI591175 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI591172 A/duck/Jiangxi/34894/2013 (A/H0) segment 3 (PA) 3591.0 0.000000e+00 2083/2152 (96%) EPI591173 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 3 (PA) 3585.5 0.000000e+00 2083/2153 (96%) EPI704519 A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA) 3574.4 0.000000e+00 2081/2153 (96%) EPI598773 A/duck/Jiangxi/6613/2013 (A/H0) segment 3 (PA) 3574.4 0.000000e+00 2081/2153 (96%) EPI614267 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 3 (PA) 3568.8 0.000000e+00 2078/2151 (96%) EPI823780 A/environment/Kamchatka/24/2016 (A/H13N8) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI704371 A/duck/Mongolia/211/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI704363 A/duck/Mongolia/208/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI704314 A/duck/Mongolia/167/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI693705 A/duck/Mongolia/83/2015 (A/H3N8) segment 3 (PA) 3563.3 0.000000e+00 2079/2153 (96%) EPI614279 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI704258 A/duck/Mongolia/30/2015 (A/H3N8) segment 3 (PA) 3557.8 0.000000e+00 2078/2153 (96%) EPI683216 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 3 (PA) 3557.8 0.000000e+00 2077/2152 (96%) EPI511081 A/mallard/Sweden/52405/2006 (A/H0) segment 3 (PA) 3552.2 0.000000e+00 2076/2152 (96%) EPI704437 A/duck/Mongolia/777/2015 (A/H3N8) segment 3 (PA) 3546.7 0.000000e+00 2076/2153 (96%) EPI401787 A/spot-billed duck/Xianghai/427/2011 (A/H5N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI372287 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI823764 A/environment/Kamchatka/23/2016 (A/H13N8) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI704543 A/duck/Mongolia/742/2015 (A/H10N7) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI704421 A/duck/Mongolia/655/2015 (A/H2N3) segment 3 (PA) 3541.1 0.000000e+00 2075/2153 (96%) EPI296486 A/mallard/Netherlands/28/2006 (A/H3N1) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI222163 A/mallard/Altai/1208/2007 (A/H3N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI222094 A/garganey/Altai/1216/2007 (A/H3N6) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI704388 A/duck/Mongolia/482/2015 (A/H2N3) segment 3 (PA) 3535.6 0.000000e+00 2074/2153 (96%) EPI372351 A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI613953 A/mallard/Sweden/101993/2009 (A/H2N9) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI598732 A/duck/Jiangxi/32180/2013 (A/H0) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI598348 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI511172 A/mallard/Sweden/52299/2006 (A/H4N6) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI234643 A/duck/Beijing/40/04 (A/H3N8) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI232397 A/duck/Beijing/61/05 (A/H3N8) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI181966 A/mallard/Netherlands/2/2005 (A/H4N2) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI613943 A/mallard/Sweden/4932/2004 (A/H9N2) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI598766 A/duck/Jiangxi/5423/2014 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI598764 A/duck/Jiangxi/34864/2013 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI591116 A/duck/Jiangxi/5418/2014 (A/H0) segment 3 (PA) 3519.0 0.000000e+00 2070/2152 (96%) EPI372327 A/shoveler/Egypt/00134-NAMRU3/2005 (A/H1N1) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI296254 A/wild duck/Korea/HDR02/2005 (A/H1N1) segment 3 (PA) 3513.4 0.000000e+00 2068/2151 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869688 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2699.1 0.000000e+00 1463/1463 (100%) EPI860236 A/wild duck/Poland/82A/2016 (A/H5N8) segment 5 (NP) 2654.8 0.000000e+00 1454/1463 (99%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863858 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863850 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863835 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863827 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 5 (NP) 2649.2 0.000000e+00 1453/1463 (99%) EPI863866 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 5 (NP) 2643.7 0.000000e+00 1452/1463 (99%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2527.3 0.000000e+00 1431/1463 (97%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2527.3 0.000000e+00 1431/1463 (97%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2521.8 0.000000e+00 1430/1463 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2510.7 0.000000e+00 1428/1463 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1425/1463 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1424/1463 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2486.7 0.000000e+00 1424/1463 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2483.0 0.000000e+00 1423/1463 (97%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2481.2 0.000000e+00 1412/1447 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2477.5 0.000000e+00 1422/1463 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2471.9 0.000000e+00 1421/1463 (97%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2466.4 0.000000e+00 1420/1463 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2466.4 0.000000e+00 1420/1463 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1420/1464 (96%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2460.9 0.000000e+00 1419/1463 (96%) EPI869680 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2449.8 0.000000e+00 1417/1463 (96%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2449.8 0.000000e+00 1418/1464 (96%) EPI816848 A/turkey/Poland/09/2014 (A/H9N2) segment 5 (NP) 2449.8 0.000000e+00 1409/1451 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2444.2 0.000000e+00 1417/1464 (96%) EPI463226 A/mallard/Sweden/100580/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI463224 A/mallard/Sweden/100559/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI463221 A/mallard/Sweden/100537/2009 (A/H6N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2444.2 0.000000e+00 1416/1463 (96%) EPI484288 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2440.5 0.000000e+00 1398/1437 (97%) EPI816840 A/turkey/Poland/08/2014 (A/H9N2) segment 5 (NP) 2435.0 0.000000e+00 1399/1440 (97%) EPI463229 A/mallard/Sweden/100633/2009 (A/H6N2) segment 5 (NP) 2433.2 0.000000e+00 1414/1463 (96%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2427.6 0.000000e+00 1414/1464 (96%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2427.6 0.000000e+00 1414/1464 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2423.9 0.000000e+00 1397/1440 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2423.9 0.000000e+00 1397/1440 (97%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2422.1 0.000000e+00 1412/1463 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2422.1 0.000000e+00 1412/1463 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2416.5 0.000000e+00 1411/1463 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2411.0 0.000000e+00 1411/1464 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2411.0 0.000000e+00 1410/1463 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2411.0 0.000000e+00 1410/1463 (96%) EPI102231 A/duck/Taiwan/WB29/99 (A/H6N1) segment 5 (NP) 2411.0 0.000000e+00 1411/1464 (96%) EPI618666 A/mallard/Sweden/2213/2003 (A/H12N5) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI251817 A/mallard/Sweden/86/2003 (A/H12N5) segment 5 (NP) 2405.5 0.000000e+00 1409/1463 (96%) EPI118136 A/mallard/Italy/36/2002 (A/H5N3) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI102229 A/chicken/Taiwan/165/99 (A/H6N1) segment 5 (NP) 2405.5 0.000000e+00 1410/1464 (96%) EPI433356 A/mallard/Czech Republic/15902-12K/2009 (A/H11N2) segment 5 (NP) 2399.9 0.000000e+00 1408/1463 (96%) EPI314216 A/wild duck/Taiwan/WB147/2001 (A/H4N6) segment 5 (NP) 2399.9 0.000000e+00 1409/1464 (96%) EPI471123 A/chicken/Iran/ZMT-101/1998 (A/H9N2) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI463238 A/mallard/Sweden/101288/2009 (A/H5N3) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI377571 A/mallard/Sweden/88/2005 (A/H0) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI251662 A/mallard/Netherlands/2/1999 (A/H3N5) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI182108 A/mallard/Netherlands/11/2007 (A/H6N5) segment 5 (NP) 2394.4 0.000000e+00 1407/1463 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618589 A/mallard/Sweden/3328/2003 (A/H12N5) segment 5 (NP) 2388.8 0.000000e+00 1407/1464 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI618101 A/mallard/Sweden/396/2002 (A/H10N4) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI463241 A/mallard/Sweden/101368/2009 (A/H4N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2388.8 0.000000e+00 1407/1464 (96%) EPI89042 A/Pigeon/Nanchang/8-142/2000 (A/H3N6) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2388.8 0.000000e+00 1406/1463 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2385.1 0.000000e+00 1405/1463 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2383.3 0.000000e+00 1405/1463 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Align Segment-ID Name Score E-Value Identity EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 835/835 (100%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 833/835 (99%) EPI869683 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1526.5 0.000000e+00 832/835 (99%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1520.9 0.000000e+00 831/835 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1519.1 0.000000e+00 829/835 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1517.2 0.000000e+00 830/835 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 827/835 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 826/835 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 825/835 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 826/836 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 826/836 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 824/836 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 823/836 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 822/836 (98%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 821/836 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1460.0 0.000000e+00 821/836 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 821/837 (98%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 820/836 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 821/837 (98%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 819/836 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 818/836 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1443.4 0.000000e+00 818/836 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 814/836 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 813/836 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 813/836 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1410.1 0.000000e+00 812/836 (97%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1410.1 0.000000e+00 812/836 (97%) EPI837813 A/environment/Korea/W136/2006 (A/H7N7) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1399.0 0.000000e+00 810/836 (96%) EPI837815 A/environment/Korea/W148/2006 (A/H7N7) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI837814 A/environment/Korea/W143/2006 (A/H7N7) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1393.5 0.000000e+00 809/836 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI869680 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2632.6 0.000000e+00 1473/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2593.8 0.000000e+00 1466/1497 (97%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2571.7 0.000000e+00 1463/1498 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2555.0 0.000000e+00 1461/1499 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2553.2 0.000000e+00 1452/1487 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2523.6 0.000000e+00 1434/1468 (97%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2521.8 0.000000e+00 1455/1499 (97%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1436/1474 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1436/1474 (97%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI372284 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2501.5 0.000000e+00 1416/1447 (97%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618520 A/mallard/Sweden/7146/2004 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618010 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514024 A/mallard/Sweden/68571/2007 (A/H4N6) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514010 A/mallard/Sweden/68551/2007 (A/H4N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514001 A/mallard/Sweden/68940/2007 (A/H4N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI513973 A/mallard/Sweden/68761/2007 (A/H4N6) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI513966 A/mallard/Sweden/68677/2007 (A/H0) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI377603 A/mallard/Sweden/68597/2007 (A/H2N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI377595 A/mallard/Sweden/68735/2007 (A/H2N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI222072 A/gadwall/Altai/1326/2007 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI222056 A/gadwall/Altai/1324/2007 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI190327 A/mallard/Netherlands/29/2006 (A/H7N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI140249 A/migratory duck/Hong Kong/MP2437/2003 (A/H6N1) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI69241 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2495.9 0.000000e+00 1448/1497 (96%) EPI618660 A/mallard/Sweden/101111/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618535 A/mallard/Sweden/50980/2006 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618493 A/mallard/Sweden/2321/2004 (A/H0) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618484 A/mallard/Sweden/100832/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618470 A/mallard/Sweden/101120/2009 (A/H2N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618460 A/mallard/Sweden/101082/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618446 A/mallard/Sweden/101163/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618431 A/mallard/Sweden/102103/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618355 A/mallard/Sweden/100760/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618348 A/mallard/Sweden/100687/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618336 A/mallard/Sweden/100740/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618322 A/mallard/Sweden/100791/2009 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI617111 A/mallard/Sweden/80329/2008 (A/H11N5) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI514031 A/mallard/Sweden/68575/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI513987 A/mallard/Sweden/68893/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI513980 A/mallard/Sweden/68836/2007 (A/H4N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI869683 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 824/829 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 817/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1491.4 0.000000e+00 816/823 (99%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 817/823 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 814/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 816/823 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 811/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 815/830 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1445.2 0.000000e+00 809/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 809/824 (98%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 813/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 812/830 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1428.6 0.000000e+00 806/822 (98%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1428.6 0.000000e+00 806/822 (98%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 805/821 (98%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 805/821 (98%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1423.0 0.000000e+00 806/823 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 806/824 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1421.2 0.000000e+00 804/821 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1402.7 0.000000e+00 806/829 (97%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1399.0 0.000000e+00 800/821 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1393.5 0.000000e+00 799/821 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1382.4 0.000000e+00 799/824 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1382.4 0.000000e+00 799/824 (96%) EPI470634 A/duck/Jiangxi/21714/2011 (A/H11N9) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI392653 A/wild bird/Korea/A72/10 (A/H7N7) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI299310 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 8 (NS) 1380.6 0.000000e+00 802/829 (96%) EPI470663 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI446539 A/environment/Jiangxi/28/2009 (A/H11N9) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI419972 A/mallard/California/2563V/2011 (A/H4N6) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI419965 A/mallard/California/2563P/2011 (A/H4N6) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%) EPI387512 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 8 (NS) 1375.0 0.000000e+00 801/829 (96%)
niman Posted December 27, 2016 Author Report Posted December 27, 2016 Isolate name: A/decoy_duck/France/161104e/2016 Isolate ID: EPI_ISL_239997 Passage details/history: field sample Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-26 Host Duck Additional host information: Domestic status: Is vaccinated: Location: France / Region Nord-Pas-De Calais / Departement du Pas-de-Calais Additional location information: Health status: Specimen source: Tracheal swab Strain or commercial product name used for vaccination: Institute information Originating lab: Anses (Ploufragan-Plouzané) Sample ID given by the sample provider: Address: Anses (Ploufragan-Plouzané) Rue de Beaucemaine 22440 Ploufragan France Submitting lab: French Agency for Food, Environmental and Occupational Health Sample ID given by the submitting laboratory: Authors: Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/decoy_duck/France/161104e/2016 2280 EPI869684 PB1 A/decoy_duck/France/161104e/2016 2297 EPI869685 PA A/decoy_duck/France/161104e/2016 2151 EPI869686 HA A/decoy_duck/France/161104e/2016 1704 EPI869687 NP A/decoy_duck/France/161104e/2016 1463 EPI869688 NA A/decoy_duck/France/161104e/2016 1411 EPI869689 MP A/decoy_duck/France/161104e/2016 982 EPI869690 NS A/decoy_duck/France/161104e/2016 835 EPI869691 Submitter information Submitter: Briand, Francois-Xavier Submission Date: 2016-12-26 Last modifier: Briand, Francois-Xavier Last modified: 2016-12-27 Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France
Admin Posted December 28, 2016 Report Posted December 28, 2016 Isolate name: A/duck/France/161108h/2016 Isolate ID: EPI_ISL_240012 Passage details/history: Type: A / H5N8 Lineage: Sample information Collection date: 2016-11-28 Host Duck Additional host information: Domestic status: Domestic Is vaccinated: Location: France / Midi-Pyrenees / Departement du Tarn Additional location information: Health status: Specimen source: Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: French Agency for Food, Environmental and Occupational Health Sample ID given by the submitting laboratory: Authors: Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/duck/France/161108h/2016 2341 EPI869806 PB1 A/duck/France/161108h/2016 2297 EPI869807 PA A/duck/France/161108h/2016 2228 EPI869808 HA A/duck/France/161108h/2016 1704 EPI869809 NP A/duck/France/161108h/2016 1565 EPI869810 NA A/duck/France/161108h/2016 1413 EPI869811 MP A/duck/France/161108h/2016 982 EPI869812 NS A/duck/France/161108h/2016 877 EPI869813 Submitter information Submitter: Briand, Francois-Xavier Submission Date: 2016-12-27 Last modifier: Briand, Francois-Xavier Last modified: 2016-12-28 Address: French Agency for Food, Environmental and Occupational Health Laboratoire de Ploufragan-Plouzané rue des Fusilles 22440 Ploufragan France
niman Posted December 28, 2016 Author Report Posted December 28, 2016 Align Segment-ID Name Score E-Value Identity EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3144.1 0.000000e+00 1704/1704 (100%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3116.4 0.000000e+00 1698/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3110.9 0.000000e+00 1697/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3099.8 0.000000e+00 1695/1704 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1692/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3083.2 0.000000e+00 1693/1705 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3072.1 0.000000e+00 1690/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1688/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3055.5 0.000000e+00 1687/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2977.9 0.000000e+00 1673/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2966.8 0.000000e+00 1671/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1669/1704 (97%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2944.7 0.000000e+00 1668/1705 (97%) EPI860239 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 2935.4 0.000000e+00 1602/1609 (99%) EPI690792 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI561495 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 4 (HA) 2933.6 0.000000e+00 1666/1705 (97%) EPI591879 A/duck/Jiangxi/23970/2013 (A/H0) segment 4 (HA) 2928.1 0.000000e+00 1665/1705 (97%) EPI703599 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 4 (HA) 2922.5 0.000000e+00 1664/1705 (97%) EPI762158 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI703607 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI690808 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1664/1706 (97%) EPI690800 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 4 (HA) 2917.0 0.000000e+00 1663/1705 (97%) EPI602037 A/duck/Ningbo/3262/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI583870 A/duck/Shaoxing/5240/2013 (A/H0) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2911.4 0.000000e+00 1662/1705 (97%) EPI762150 A/duck/Eastern China/JY/2014 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1662/1706 (97%) EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2905.9 0.000000e+00 1661/1705 (97%) EPI703595 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 4 (HA) 2900.4 0.000000e+00 1660/1705 (97%) EPI681280 A/goose/Zhejiang/77166/2014 (A/H5N2) segment 4 (HA) 2896.7 0.000000e+00 1658/1703 (97%) EPI749889 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 4 (HA) 2894.8 0.000000e+00 1660/1706 (97%) EPI682915 A/duck/Wenzhou/YHQL22/2014 (A/H5N6) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI646105 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 4 (HA) 2889.3 0.000000e+00 1658/1705 (97%) EPI681298 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 4 (HA) 2883.7 0.000000e+00 1658/1706 (97%) EPI703593 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 4 (HA) 2878.2 0.000000e+00 1656/1705 (97%) EPI703592 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1655/1705 (97%) EPI681297 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 4 (HA) 2872.7 0.000000e+00 1656/1706 (97%)
niman Posted December 28, 2016 Author Report Posted December 28, 2016 Align Segment-ID Name Score E-Value Identity EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2560.6 0.000000e+00 1399/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2555.0 0.000000e+00 1398/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1395/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1394/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2525.5 0.000000e+00 1393/1406 (99%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2503.3 0.000000e+00 1390/1407 (98%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2470.1 0.000000e+00 1385/1408 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1383/1408 (98%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2436.9 0.000000e+00 1379/1408 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2425.8 0.000000e+00 1377/1408 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2420.2 0.000000e+00 1376/1408 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1376/1409 (97%) EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1375/1408 (97%) EPI762160 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI703638 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1374/1408 (97%) EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2409.2 0.000000e+00 1375/1409 (97%) EPI681355 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 6 (NA) 2403.6 0.000000e+00 1372/1407 (97%) EPI703635 A/duck/Eastern China/L1021/2012 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI690802 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI681356 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 6 (NA) 2398.1 0.000000e+00 1372/1408 (97%) EPI646030 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1371/1408 (97%) EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2392.5 0.000000e+00 1372/1409 (97%) EPI602039 A/duck/Ningbo/3262/2013 (A/H0) segment 6 (NA) 2390.7 0.000000e+00 1352/1380 (97%) EPI762152 A/duck/Eastern China/JY/2014 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703634 A/duck/Eastern China/L0722/2012 (A/H5N8) segment 6 (NA) 2387.0 0.000000e+00 1370/1408 (97%) EPI703633 A/duck/Eastern China/L0611/2011 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1370/1409 (97%) EPI703631 A/duck/Eastern China/L0405/2010 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI690810 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 6 (NA) 2381.5 0.000000e+00 1369/1408 (97%) EPI703647 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 6 (NA) 2375.9 0.000000e+00 1368/1408 (97%) EPI703632 A/duck/Eastern China/L0423/2011 (A/H5N8) segment 6 (NA) 2353.8 0.000000e+00 1359/1400 (97%) EPI749888 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 6 (NA) 2342.7 0.000000e+00 1353/1395 (96%) EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2337.1 0.000000e+00 1354/1397 (96%) EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2331.6 0.000000e+00 1361/1409 (96%) EPI561600 A/broiler duck/Korea/H133/2014 (A/H5N8) segment 6 (NA) 2326.1 0.000000e+00 1359/1408 (96%)
niman Posted December 28, 2016 Author Report Posted December 28, 2016 Align Segment-ID Name Score E-Value Identity EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1788.7 0.000000e+00 977/982 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1779.4 0.000000e+00 973/978 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 972/983 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1714.8 0.000000e+00 964/982 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1703.7 0.000000e+00 963/983 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1689.0 0.000000e+00 960/983 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1681.6 0.000000e+00 958/982 (97%) EPI602450 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602443 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602436 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602429 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602405 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602398 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602391 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%) EPI602384 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)
niman Posted December 28, 2016 Author Report Posted December 28, 2016 Align Segment-ID Name Score E-Value Identity EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI868845 A/turkey/England/052131/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI863862 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 1 (PB2) 4135.8 0.000000e+00 2266/2280 (99%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3956.6 0.000000e+00 2235/2281 (97%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3940.0 0.000000e+00 2232/2281 (97%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3934.5 0.000000e+00 2231/2281 (97%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3928.9 0.000000e+00 2230/2281 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3906.8 0.000000e+00 2226/2281 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3890.2 0.000000e+00 2223/2281 (97%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 3884.6 0.000000e+00 2222/2281 (97%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 3879.1 0.000000e+00 2221/2281 (97%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 3862.5 0.000000e+00 2218/2281 (97%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3856.9 0.000000e+00 2218/2282 (97%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3851.4 0.000000e+00 2217/2282 (97%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2216/2282 (97%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 3829.2 0.000000e+00 2212/2281 (96%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3818.1 0.000000e+00 2210/2281 (96%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3818.1 0.000000e+00 2211/2282 (96%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3812.6 0.000000e+00 2209/2281 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3796.0 0.000000e+00 2208/2283 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2206/2282 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI399891 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI335411 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 1 (PB2) 3784.9 0.000000e+00 2205/2282 (96%) EPI314734 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 1 (PB2) 3784.9 0.000000e+00 2206/2283 (96%) EPI704435 A/duck/Mongolia/777/2015 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2204/2282 (96%) EPI469227 A/duck/Jiangxi/16769/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469225 A/duck/Jiangxi/16326/2010 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469143 A/duck/Jiangxi/16285/2010 (A/H7N3) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI469228 A/duck/Jiangxi/21980/2010 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI527590 A/ruddy shelduck/Mongolia/1209/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527569 A/ruddy shelduck/Mongolia/436/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2202/2283 (96%) EPI527561 A/common goldeneye/Mongolia/1271/2010 (A/H7N1) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI527546 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%) EPI469226 A/duck/Jiangxi/16736/2010 (A/H7N3) segment 1 (PB2) 3762.7 0.000000e+00 2201/2282 (96%)
niman Posted December 28, 2016 Author Report Posted December 28, 2016 Align Segment-ID Name Score E-Value Identity EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4152.4 0.000000e+00 2265/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4146.8 0.000000e+00 2264/2274 (99%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4132.1 0.000000e+00 2261/2274 (99%) EPI869807 A/duck/France/161108h/2016 (A/H5N8) segment 2 (PB1) 4130.2 0.000000e+00 2261/2274 (99%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2260/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2259/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4124.7 0.000000e+00 2260/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4119.1 0.000000e+00 2257/2271 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4108.1 0.000000e+00 2257/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4102.5 0.000000e+00 2256/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4097.0 0.000000e+00 2255/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2255/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4091.4 0.000000e+00 2254/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4085.9 0.000000e+00 2253/2274 (99%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4074.8 0.000000e+00 2251/2274 (98%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4045.3 0.000000e+00 2245/2275 (98%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3897.6 0.000000e+00 2220/2275 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3892.0 0.000000e+00 2219/2275 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3869.9 0.000000e+00 2216/2276 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3869.9 0.000000e+00 2215/2275 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3864.3 0.000000e+00 2214/2275 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3858.8 0.000000e+00 2214/2276 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI823905 A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823897 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI823785 A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 2 (PB1) 3853.2 0.000000e+00 2213/2276 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3847.7 0.000000e+00 2211/2275 (97%) EPI469416 A/duck/Yunnan/2908/2009 (A/H11N9) segment 2 (PB1) 3836.6 0.000000e+00 2207/2272 (97%) EPI372416 A/shoveler/Egypt/00241-NAMRU3/2007 (A/H7N3) segment 2 (PB1) 3836.6 0.000000e+00 2209/2275 (97%) EPI704321 A/duck/Mongolia/173/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI540365 A/duck/Bangladesh/1521/2009 (A/H4N6) segment 2 (PB1) 3831.1 0.000000e+00 2209/2276 (97%) EPI476095 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476083 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI476028 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI372440 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI527601 A/northern shoveler/Mongolia/907V/2009 (A/H10N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI540253 A/duck/Bangladesh/31687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI540229 A/duck/Bangladesh/1687/2010 (A/H1N1) segment 2 (PB1) 3820.0 0.000000e+00 2205/2274 (96%) EPI527654 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527639 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 2 (PB1) 3820.0 0.000000e+00 2206/2275 (96%) EPI527641 A/ruddy shelduck/Mongolia/894V/2009 (A/H4N3) segment 2 (PB1) 3814.5 0.000000e+00 2205/2275 (96%) EPI601832 A/duck/Jiangxi/17142/2013 (A/H0) segment 2 (PB1) 3812.6 0.000000e+00 2193/2258 (97%) EPI704412 A/duck/Mongolia/543/2015 (A/H4N6) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI681228 A/goose/Zhejiang/112080/2014 (A/H5N6) segment 2 (PB1) 3808.9 0.000000e+00 2204/2275 (96%) EPI583945 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 2 (PB1) 3808.9 0.000000e+00 2205/2276 (96%) EPI704518 A/duck/Mongolia/518/2015 (A/H10N3) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704444 A/duck/Mongolia/996/2015 (A/H3N8) segment 2 (PB1) 3803.4 0.000000e+00 2204/2276 (96%) EPI527616 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 2 (PB1) 3803.4 0.000000e+00 2203/2275 (96%) EPI704354 A/duck/Mongolia/200/2015 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%)
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