Five Full Zika Colombia Sequences

[niman]

Scripps has published at Genbank the 5 full Colombia sequences at their website

https://github.com/andersen-lab/zika-florida/tree/master/consensus_sequences

36

1.5E+04

coding-complete

ZC188_423568715_XX_2016-01-16_colombia

ZC188.c1.SR.a1.l3.l4.r1

ZC192Se

423401315

Serum

****

98.36

30396.29

2016.01.07

Columbia

39

1.7E+04

coding-complete

ZC192_423401315_XX_2016-01-07_colombia

ZC192.c1.SR.a1.l3.l4.r1

ZC204Se

424439915

Serum

****

99.74

29003.25

2016.01.06

Columbia

48

2.1E+04

coding-complete

ZC204_424439915_XX_2016-01-05_colombia

ZC204.c1.SR.a1.l1.l2.r1

ZC207Se

423217515

Serum

****

96.68

19477.70

2016.01.09

Columbia

16

6.7E+04

coding-complete

ZC207_423217515_XX_2016-01-09_colombia

ZC207.c1.SR.a1.l1.l2.r1

ZC199Se

4238001315

Serum

***

97.44

98358.93

2016.01.10

Colombia

10

4.3E+03

coding-complete

ZC199Se_XX_2016-01-10_colombia

ZC199.c1.SR.a1.l1.l2.l3.l4.l5.l6.l7.r1

[niman]

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds

10,389 bp linear RNA

Accession:

 

KY317936.1

 

GI:

 

1124099354

GenBankFASTAGraphics

Select item 11240993568.

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds

10,462 bp linear RNA

Accession:

 

KY317937.1

 

GI:

 

1124099356

GenBankFASTAGraphics

Select item 11240993589.

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds

10,387 bp linear RNA

Accession:

 

KY317938.1

 

GI:

 

1124099358

GenBankFASTAGraphics

Select item 112409936010.

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds

10,608 bp linear RNA

Accession:

 

KY317939.1

 

GI:

 

1124099360

GenBankFASTAGraphics

Select item 112409936211.

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds

10,391 bp linear RNA

Accession:

 

KY317940.1

 

GI:

 

1124099362

GenBankFASTAGraphics

[niman]

LOCUS       KY317936               10389 bp    RNA     linear   VRL 27-DEC-2016
DEFINITION  Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se
            polyprotein gene, complete cds.
ACCESSION   KY317936
VERSION     KY317936.1
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10389)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Zika virus sequenced from Colombia, 2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10389)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2016) Department of Immunology and Microbial
            Science, The Scripps Research Institute, 10550 North Torrey Pines
            Road, IMM-210, La Jolla, CA 92037, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: NovoAlign v. V3.04
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10389
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="ZIKV/Homo_sapiens/Colombia/2016/ZC188Se"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Colombia"
                     /collection_date="16-Jan-2016"
                     /collected_by="Antibody Systems Inc"
     CDS             82..10353
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="APQ41782.1"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGAETSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLLGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMTMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVAKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gcgacagttc gagtttgaag cgaaagctag caacagtatc aacaggtttt attttggatt
       61 tggaaacgag agtttctggt catgaaaaac ccaaaaaaga aatccggagg attccggatt
      121 gtcaatatgc taaaacgcgg agtagcccgt gtgagcccct ttgggggctt gaagaggctg
      181 ccagccggac ttctgctggg tcatgggccc atcaggatgg tcttggcgat tctagccttt
      241 ttgagattca cggcaatcaa gccatcactg ggtctcatca atagatgggg ttcagtgggg
      301 aaaaaagagg ctatggaaat aataaagaag ttcaagaaag atctggctgc catgctgaga
      361 ataatcaatg ctaggaagga gaagaagaga cgaggcgcag aaactagtgt cggaattgtt
      421 ggcctcctgc tgaccacagc tatggcagcg gaggtcacta gacgtgggag tgcatactat
      481 atgtacttgg acagaaacga tgctggggag gccatatctt ttccaaccac attggggatg
      541 aataagtgtt atatacagat catggatctt ggacacatgt gtgatgccac catgagctat
      601 gaatgcccta tgctggatga gggggtggaa ccagatgacg tcgattgttg gtgcaacacg
      661 acgtcaactt gggttgtgta cggaacctgc catcacaaaa aaggtgaagc acggagatct
      721 agaagagccg tgacgctccc ctcccattcc actaggaagc tgcaaacgcg gtcgcaaacc
      781 tggttggaat caagagaata cacaaagcac ttgattagag tcgaaaattg gatattcagg
      841 aaccctggtt tcgctttagc agcagctgcc atcgcttggc ttttgggaag ctcaacgagc
      901 caaaaagtca tatacttggt catgatactg ctgattgccc cggcatacag catcaggtgc
      961 ataggagtca gcaataggga ctttgtggaa ggtatgtcag gtgggacttg ggttgatgtt
     1021 gtcttggaac atggaggttg tgtcaccgta atggcacagg acaaaccgac tgtcgacata
     1081 gagctggtta caacaacagt cagcaacatg gcggaggtaa gatcctactg ctatgaggca
     1141 tcaatatcag acatggcttc ggacagccgc tgcccaacac aaggtgaagc ctaccttgac
     1201 aagcaatcag acactcaata tgtttgcaaa agaacgttag tggacagagg ctggggaaat
     1261 ggatgtggac tttttggcaa agggagcctg gtgacatgcg ctaagtttgc atgctccaag
     1321 aaaatgaccg ggaagagcat ccagccagag aatctggagt accggataat gttgtcagtt
     1381 catggctccc agcacagtgg gatgatcgtt aatgacacag gacatgaaac tgatgagaat
     1441 agagcgaagg ttgagataac gcccaattca ccaagagccg aagccaccct ggggggtttt
     1501 ggaagcctag gacttgattg tgaaccgagg acaggccttg acttttcaga tttgtattac
     1561 ttgactatga ataacaagca ctggttggtt cacaaggagt ggttccacga cattccatta
     1621 ccttggcacg ctggggcaga caccggaact ccacactgga acaacaaaga agcactggta
     1681 gagttcaagg acgcacatgc caaaaggcaa actgtcgtgg ttctagggag tcaagaagga
     1741 gcagttcaca cggcccttgc tggagctctg gaggctgaga tggatggtgc aaagggaagg
     1801 ctgtcctctg gccacttgaa atgtcgcctg aaaatggata aacttagatt gaagggcgtg
     1861 tcatactcct tgtgtaccgc agcgttcaca ttcaccaaga tcccggctga aacactgcac
     1921 gggacagtca cagtggaggt acagtacgca gggacagatg gaccttgcaa ggttccagct
     1981 cagatggcgg tggacatgca aactctgacc ccagttggga ggttgataac cgctaacccc
     2041 gtaatcactg aaagcactga gaactctaag atgatgctgg aacttgatcc accatttggg
     2101 gactcttaca ttgtcatagg agtcggggag aagaagatca cccaccactg gcataggagt
     2161 ggcagcacca ttggaaaagc atttgaagcc actgtgagag gtgccaagag aatggcagtc
     2221 ttgggagaca cagcctggga ctttggatca gttggaggcg ctctcaactc attgggcaag
     2281 ggcatccatc aaatttttgg agcagctttc aaatcattgt ttggaggaat gtcctggttc
     2341 tcacaaattc tcattggaac gttgctgatg tggttgggtc tgaacacaaa gaatggatct
     2401 atttccctta tgtgcttggc cttaggggga gtgttgatct tcttatccac agccgtctct
     2461 gctgatgtgg ggtgctcggt ggacttctca aagaaggaga cgagatgtgg tacaggggtg
     2521 ttcgtctata acgacgttga agcctggagg gacaggtaca agtaccatcc tgactccccc
     2581 cgtagattgg cagcagcagt caagcaagcc tgggaagatg gtatctgcgg gatctcctct
     2641 gtttcaagaa tggaaaacat catgtggaga tcagtagaag gggagctcaa cgcaatcctg
     2701 gaagagaatg gagttcaact gacggtcgtt gtgggatctg taaaaaaccc catgtggaga
     2761 ggtccacaga gattgcccgt gcctgtgaac gagctgcccc acggctggaa ggcttggggg
     2821 aaatcgtact tcgtcagagc agcaaagaca aataacagct ttgtcgtgga tggtgacaca
     2881 ctgaaggaat gcccactcaa acatagagca tggaacagct ttcttgtgga ggatcatggg
     2941 ttcggggtat ttcacactag tgtctggctc aaggttagag aagattattc attagagtgt
     3001 gatccagccg ttattggaac agctgttaag ggaaaggagg ctgtacacag tgatctaggc
     3061 tactggattg agagtgagaa gaatgacaca tggaggctga agagggccca tctgatcgag
     3121 atgaaaacat gtgaatggcc aaagtcccac acattgtgga cagatggaat agaagagagt
     3181 gatctgatca tacccaagtc tttagctggg ccactcagcc atcacaatac cagagagggc
     3241 tacaggaccc aaatgaaagg gccatggcac agtgaagagc ttgaaattcg gtttgaggaa
     3301 tgcccaggca ctaaggtcca cgtggaggaa acatgtggaa caagaggacc atctctgaga
     3361 tcaaccactg caagcggaag ggtgatcgag gaatggtgct gcagggagtg cacaatgccc
     3421 ccactgtcgt tctgggctaa agatggctgt tggtatggaa tggagataag gcccaggaaa
     3481 gaaccagaaa gcaacttagt aaggtcaatg gtgactgcag gatcaactga tcacatggat
     3541 cacttctccc ttggagtgct tgtgattctg ctcatggtgc aggaagggct gaagaagaga
     3601 atgaccacaa agatcatcat aagcacatca atggcagtgc tggtagctat gatcctggga
     3661 ggattttcaa tgagtgacct ggctaagctt gcaattttga tgggtgccac cttcgcggaa
     3721 atgaacactg gaggagatgt agctcatctg gcgctgatag cggcattcaa agtcagacca
     3781 gcgttgctgg tatctttcat cttcagagct aattggacac cccgtgaaag catgctgctg
     3841 gccttggcct cgtgtctttt gcaaactgcg atctccgcct tggagggcga cctgatggtt
     3901 ctcatcaatg gttttgcttt ggcctggttg gcaatacgag cgatggttgt tccacgcact
     3961 gacaacatca ccttggcaat cctggctgct ctgacaccac tggcccgggg cacactgctt
     4021 gtggcgtgga gagcaggcct tgctacttgc ggggggttta tgctcctctc tctgaaggga
     4081 aaaggcagtg tgaagaagaa cttaccattt gtcatggccc tgggactaac cgctgtgagg
     4141 ctggtcgacc ccatcaacgt ggtgggactg ctgttgctca caaggagtgg gaagcggagc
     4201 tggcccccta gcgaagtact cacagctgtt ggcctgatat gcgcattggc tggagggttc
     4261 gccaaggcag atatagagat ggctgggccc atggccgcgg tcggtctgct aattgtcagt
     4321 tacgtggtct caggaaagag tgtggacatg tacattgaaa gagcaggtga catcacatgg
     4381 gaaaaagatg cggaagtcac tggaaacagt ccccggctcg atgtggcgct agatgagagt
     4441 ggtgatttct ccctggtgga ggatgacggt ccccccatga gagagatcat actcaaggtg
     4501 gtcctgatga ccatctgtgg catgaaccca atagccatac cctttgcagc tggagcgtgg
     4561 tacgtatacg tgaagactgg aaaaaggagt ggtgctctat gggatgtgcc tgctcccaag
     4621 gaagtaaaaa agggggagac cacagatgga gtgtacagag taatgactcg tagactgcta
     4681 ggttcaacac aagttggagt gggagttatg caagaggggg tctttcacac tatgtggcac
     4741 gtcacaaaag gatccgcgct gagaagcggt gaagggagac ttgatccata ctggggagat
     4801 gtcaagcagg atctggtgtc atactgtggt ccatggaagc tagatgccgc ctgggacggg
     4861 cacagcgagg tgcagctctt ggccgtgccc cccggagaga gagcgaggaa catccagact
     4921 ctgcccggaa tatttaagac aaaggatggg gacattggag cggttgcgct ggattaccca
     4981 gcaggaactt caggatctcc aatcctagac aagtgtggga gagtgatagg actttatggc
     5041 aatggggtcg tgatcaaaaa tgggagttat gttagtgcca tcacccaagg gaggagggag
     5101 gaagagactc ctgttgagtg cttcgagcct tcgatgctga agaagaagca gctaactgtc
     5161 ttagacttgc atcctggagc tgggaaaacc aggagagttc ttcctgaaat agtccgtgaa
     5221 gccataaaaa caagactccg tactgtgatc ttagctccaa ccagggttgt cgctgctgaa
     5281 atggaggagg cccttagagg gcttccagtg cgttatatga caacagcagt caatgtcacc
     5341 cactctggaa cagaaatcgt cgacttaatg tgccatgcca ccttcacttc acgtctacta
     5401 cagccaatca gagtccccaa ctataatctg tatattatgg atgaggccca cttcacagat
     5461 ccctcaagta tagcagcaag aggatacatt tcaacaaggg ttgagatggg cgaggcggct
     5521 gccatcttca tgaccgccac gccaccagga acccgtgacg catttccgga ctccaactca
     5581 ccaattatgg acaccgaagt ggaagtccca gagagagcct ggagctcagg ctttgattgg
     5641 gtgacggatc attctggaaa aacagtttgg tttgttccaa gcgtgaggaa cggcaatgag
     5701 atcgcagctt gtctgacaaa ggctggaaaa cgggttatac agctcagcag aaagactttt
     5761 gagacagagt tccagaaaac aaaacatcaa gagtgggact ttgtcgtgac aactgacatt
     5821 tcagagatgg gcgccaactt taaagctgac cgtgtcatag attccaggag atgcctaaag
     5881 ccggtcatac ttgatggcga gagagtcatt ctggctggac ccatgcctgt cacacatgcc
     5941 agcgctgccc agaggagggg gcgcataggc aggaatccca ataaacctgg agatgagtat
     6001 ctgtatggag gtgggtgcgc agagactgac gaagaccatg cacactggct tgaagcaaga
     6061 atgctccttg acaatattta cctccaagat ggcctcatag cctcgctcta tcgacctgag
     6121 gccgacaaag tagcagccat tgagggagag ttcaagctta ggacggagca aaggaagacc
     6181 tttgtggaac tcatgaaaag aggagatctt cctgtttggc tggcctatca ggttgcatct
     6241 gccggaataa cctacacaga tagaagatgg tgctttgatg gcacgaccaa caacaccata
     6301 atggaagaca gtgtgccggc agaggtgtgg accagacacg gagagaaaag agtgctcaaa
     6361 ccgaggtgga tggacgccag agtttgttca gatcatgcgg ccctgaagtc attcaaggag
     6421 tttgccgctg ggaaaagagg agcggctttt ggagtgatgg aagccctggg aacactgcca
     6481 ggacacatga cagagagatt ccaggaagcc attgacaacc tcgctgtgct catgcgggca
     6541 gagactggaa gcaggcctta caaagccgcg gcggcccaat tgccggagac cctagagacc
     6601 attatgcttt tggggttgct gggaacagtc tcgctgggaa tctttttcgt cttgatgagg
     6661 aacaagggca tagggaagat gggctttgga atggtgactc ttggggccag cgcatggctc
     6721 atgtggctct cggaaattga gccagccaga attgcatgtg tcctcattgt tgtgttccta
     6781 ttgctggtgg tgctcatacc tgagccagaa aagcaaagat ctccccagga caaccaaatg
     6841 gcaatcatca tcatggtagc agtaggtctt ctgggcttga ttaccgccaa tgaactcgga
     6901 tggttggaga gaacaaagag tgacctaagc catctactgg gaaggagaga ggagggggca
     6961 accataggat tctcaatgga cattgacctg cggccagcct cagcttgggc catctatgct
     7021 gccttgacaa ctttcattac cccagccgtc caacatgcag tgaccacttc atacaacaac
     7081 tactccttaa tggcgatggc cacgcaagct ggagtgttgt ttggtatggg caaagggatg
     7141 ccattctacg catgggactt tggagtcccg ctgctaatga taggttgcta ctcacaatta
     7201 acacccctga ccctaatagt ggccatcatt ttgctcgtgg cgcactacat gtacttgatc
     7261 ccagggctgc aggcagcagc tgcgcgtgct gcccagaaga gaacggcagc tggcatcatg
     7321 aagaaccctg ttgtggatgg aatagtggtg actgacattg acacaatgac aattgacccc
     7381 caagtggaga aaaagatggg acaggtgcta ctcatagcag tagccgtctc cagcgccata
     7441 ctgtcgcgga ccgcctgggg gtggggggag gctggggccc tgatcacagc cgcaacttcc
     7501 actttgtggg aaggctctcc gaacaagtac tggaactcct ctacagccac ttcactgtgt
     7561 aacattttta ggggaagtta cttggctgga gcttctctaa tctacacagt aacaagaaac
     7621 gctggcttgg tcaagagacg tgggggtgga acaggagaga ccctgggaga gaaatggaag
     7681 gcccgcttga accagatgtc ggccctggag ttctactcct acaaaaagtc aggcatcacc
     7741 gaggtgtgca gagaagaggc ccgccgcgcc ctcaaggacg gtgtggcaac gggaggccat
     7801 gctgtgtccc gaggaagtgc aaagctgaga tggctggtgg agcggggata cctgcagccc
     7861 tatggaaagg tcattgatct tggatgtggc agagggggct ggagttacta cgccgccacc
     7921 atccgcaaag ttcaagaagt gaaaggatac acaaaaggag gccctggtca tgaagaaccc
     7981 gtgttggtgc aaagctatgg gtggaacata gtccgtctta agagtggggt ggacgtcttt
     8041 catatggcgg ctgagccgtg tgacacgttg ctgtgtgaca taggtgagtc atcatctagt
     8101 cctgaagtgg aagaagcacg gacgctcaga gtcctctcca tggtggggga ttggcttgaa
     8161 aaaagaccag gagccttttg tataaaagtg ttgtgcccat acaccagcac tatgatggaa
     8221 accctggagc gactgcagcg taggtatggg ggaggactgg tcagagtgcc actctcccgc
     8281 aactctacac atgagatgta ctgggtctct ggagcgaaaa gcaacaccat aaaaagtgtg
     8341 tccaccacga gccagctcct cttggggcgc atggacgggc ctaggaggcc agtgaaatat
     8401 gaggaggatg tgaatctcgg ctctggcacg cgggctgtgg taagctgcgc tgaagctccc
     8461 aacatgaaga tcattggtaa ccgcattgaa aggatccgca gtgagcacgc ggaaacgtgg
     8521 ttctttgacg agaaccaccc atataggaca tgggcttacc atggaagcta tgaggccccc
     8581 acacaagggt cagcgtcctc tctaataaac ggggttgtca ggctcctgtc aaaaccctgg
     8641 gatgtggtga ctggagtcac aggaatagcc atgaccgaca ccacaccgta tggtcagcaa
     8701 agagttttca aggaaaaagt ggacactagg gtgccagacc cccaagaagg cactcgtcag
     8761 gttatgacca tggtctcttc ctggttgtgg aaagagctag gcaaacacaa acggccacga
     8821 gtctgtacca aagaagagtt catcaacaag gttcgtagca atgcagcatt aggggcaata
     8881 tttgaagagg aaaaagagtg gaagactgca gtggaagctg tgaacgatcc aaggttctgg
     8941 gctctagtgg acaaggaaag agagcaccac ctgagaggag agtgccagag ttgtgtgtac
     9001 aacatgatgg gaaaaagaga aaagaaacaa ggggaatttg gaaaggccaa gggcagccgc
     9061 gccatctggt atatgtggct aggggctaga tttctagagt tcgaagccct tggattcttg
     9121 aacgaggatc actggatggg gagagagaac tcaggaggtg gtgttgaagg gctgggatta
     9181 caaagactcg gatatgtcct agaagagatg agtcgcatac caggaggaag gatgtatgca
     9241 gatgacactg ctggctggga cacccgcatt agcaggtttg atctggagaa tgaagctcta
     9301 atcaccaacc aaatggagaa agggcacagg gccttggcat tggccataat caagtacaca
     9361 taccaaaaca aagtggtaaa ggtccttaga ccagctgaaa aagggaaaac agttatggac
     9421 attatttcga gacaagacca aagggggagc ggacaagttg tcacttacgc tcttaacaca
     9481 tttaccaacc tagtggtgca actcattcgg aatatggagg ctgaggaagt tctagagatg
     9541 caagacttgt ggctgctgcg gaggtcagag aaagtgacca actggttgca gagcaacgga
     9601 tgggataggc tcaaacgaat ggcagtcagt ggagatgatt gcgttgtgaa gccaattgat
     9661 gataggtttg cacatgccct caggttcttg aatgatatgg gaaaagttag gaaggacaca
     9721 caagagtgga aaccctcaac tggatgggac aactgggaag aagttccgtt ttgctcccac
     9781 cacttcaaca agctccatct caaggacggg aggtccattg tggttccctg ccgccaccaa
     9841 gatgaactga ttggccgggc ccgcgtctct ccaggggcgg gatggagcat ccgggagact
     9901 gcttgcctag caaaatcata tgcgcaaatg tggcagctcc tttatttcca cagaagggac
     9961 ctccgactga tggccaatgc catttgttca tctgtgccag ttgactgggt tccaactggg
    10021 agaactacct ggtcaatcca tggaaaggga gaatggatga ccactgaaga catgcttgtg
    10081 gtgtggaaca gagtgtggat tgaggagaac gaccacatgg aagacaagac cccagttgcg
    10141 aaatggacag acattcccta tttgggaaaa agggaagact tgtggtgtgg atctctcata
    10201 gggcacagac cgcgcaccac ctgggctgag aacattaaaa acacagtcaa catggtgcgc
    10261 aggatcatag gtgatgaaga aaagtacatg gactacctat ccacccaagt tcgctacttg
    10321 ggcgaagaag ggtctacacc tggagtgctg taagcaccaa tcttaatgtt gtcaggcctg
    10381 ctagtcagc

[niman]

Sequences producing significant alignments:

Select:AllNone Selected:0

AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments

Sequences producing significant alignments:

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
Select seq gb|KY317936.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds	18969	18969	100%	0.0	100%	KY317936.1
Select seq gb|KY317939.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds	18938	18938	100%	0.0	99%	KY317939.1
Select seq gb|KY317938.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds	18908	18908	100%	0.0	99%	KY317938.1
Select seq gb|KX198135.2|	Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome	18897	18897	100%	0.0	99%	KX198135.2
Select seq gb|KY014303.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds	18892	18892	100%	0.0	99%	KY014303.1
Select seq gb|KY317940.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds	18886	18886	100%	0.0	99%	KY317940.1
Select seq gb|KX156776.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome	18886	18886	100%	0.0	99%	KX156776.2
Select seq gb|KX156774.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome	18881	18881	100%	0.0	99%	KX156774.2
Select seq gb|KX156775.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome	18875	18875	100%	0.0	99%	KX156775.2
Select seq gb|KX087102.2|	Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome	18875	18875	100%	0.0	99%	KX087102.2
Select seq gb|KU820897.5|	Zika virus isolate FLR polyprotein gene, complete cds	18875	18875	100%	0.0	99%	KU820897.5
Select seq gb|KX247646.1|	Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome	18875	18875	100%	0.0	99%	KX247646.1
Select seq gb|KU647676.1|	Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds	18870	18870	100%	0.0	99%	KU647676.1
Select seq gb|KY317937.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds	18853	18853	100%	0.0	99%	KY317937.1
Select seq gb|KX702400.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome	18853	18853	100%	0.0	99%	KX702400.1
Select seq gb|KX893855.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome	18851	18851	100%	0.0	99%	KX893855.1
Select seq gb|KU922960.1|	Zika virus isolate MEX/InDRE/Sm/2016, complete genome	18848	18848	100%	0.0	99%	KU922960.1
Select seq gb|KX548902.1|	Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds	18842	18842	100%	0.0	99%	KX548902.1
Select seq gb|KU922923.1|	Zika virus isolate MEX/InDRE/Lm/2016, complete genome	18842	18842	100%	0.0	99%	KU922923.1
Select seq gb|KX447510.1|	Zika virus isolate 1_0049_PF polyprotein gene, complete cds	18820	18820	100%	0.0	99%	KX447510.1
Select seq gb|KU991811.1|	Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds	18814	18814	100%	0.0	99%	KU991811.1
Select seq gb|KY075932.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL001Sa polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KY075932.1
Select seq gb|KX447512.1|	Zika virus isolate 1_0181_PF polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KX447512.1
Select seq gb|KX369547.1|	Zika virus strain PF13/251013-18, complete genome	18809	18809	100%	0.0	99%	KX369547.1
Select seq gb|KU509998.3|	Zika virus strain Haiti/1225/2014, complete genome	18809	18809	100%	0.0	99%	KU509998.3
Select seq gb|KJ776791.2|	Zika virus strain H/PF/2013, complete genome	18803	18803	100%	0.0	99%	KJ776791.2
Select seq gb|KX447509.1|	Zika virus isolate 1_0087_PF polyprotein gene, complete cds	18803	18803	100%	0.0	99%	KX447509.1
Select seq gb|KX447513.1|	Zika virus isolate 1_0134_PF polyprotein gene, complete cds	18798	18798	100%	0.0	99%	KX447513.1
Select seq gb|KR872956.1|	Zika virus strain 17829 polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KR872956.1
Select seq gb|KX197205.1|	Zika virus isolate 9, complete genome	18792	18792	100%	0.0	99%	KX197205.1
Select seq gb|KX447515.1|	Zika virus isolate 1_0030_PF polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KX447515.1
Select seq gb|KX447511.1|	Zika virus isolate 1_0015_PF polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KX447511.1
Select seq gb|KX280026.1|	Zika virus isolate Paraiba_01, complete genome	18792	18792	100%	0.0	99%	KX280026.1
Select seq gb|KU707826.1|	Zika virus isolate SSABR1, complete genome	18792	18792	100%	0.0	99%	KU707826.1
Select seq gb|KU365779.1|	Zika virus strain BeH819966 polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KU365779.1
Select seq gb|KU321639.1|	Zika virus strain ZikaSPH2015, complete genome	18792	18792	100%	0.0	99%	KU321639.1
Select seq gb|KX447514.1|	Zika virus isolate 1_0035_PF polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KX447514.1
Select seq gb|KX262887.1|	Zika virus isolate 103451, complete genome	18787	18787	100%	0.0	99%	KX262887.1
Select seq gb|KX051563.1|	Zika virus isolate Haiti/1/2016, complete genome	18787	18787	100%	0.0	99%	KX051563.1
Select seq gb|KX447516.1|	Zika virus isolate 1_0111_PF polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KX447516.1
Select seq gb|KU729218.1|	Zika virus isolate BeH828305 polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KU729218.1
Select seq gb|KX694534.2|	Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome	18776	18776	100%	0.0	99%	KX694534.2
Select seq gb|KU758877.1|	Zika virus isolate 17271 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU758877.1
Select seq gb|KX197192.1|	Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome	18776	18776	100%	0.0	99%	KX197192.1
Select seq gb|KU926309.1|	Zika virus isolate Rio-U1, complete genome	18776	18776	100%	0.0	99%	KU926309.1
Select seq gb|KU365780.1|	Zika virus strain BeH815744 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU365780.1
Select seq gb|KY014297.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds	18774	18774	100%	0.0	99%	KY014297.1
Select seq gb|KU497555.1|	Zika virus isolate Brazil-ZKV2015, complete genome	18772	18772	99%	0.0	99%	KU497555.1
Select seq gb|KX811222.1|	Zika virus isolate Brazil_2015_MG, complete genome	18770	18770	100%	0.0	99%	KX811222.1
Select seq gb|KU365777.1|	Zika virus strain BeH818995 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KU365777.1
Select seq gb|KY328289.1|	Zika virus isolate HN16, complete genome	18764	18764	100%	0.0	99%	KY328289.1
Select seq gb|KX879604.1|	Zika virus isolate SN089, complete genome	18764	18764	100%	0.0	99%	KX879604.1
Select seq gb|KU501217.1|	Zika virus strain 8375 polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KU501217.1
Select seq gb|KU365778.1|	Zika virus strain BeH819015 polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KU365778.1
Select seq gb|KU312312.1|	Zika virus isolate Z1106033 polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KU312312.1
Select seq gb|KU940228.1|	Zika virus isolate Bahia07, partial genome	18759	18759	100%	0.0	99%	KU940228.1
Select seq gb|KU501216.1|	Zika virus strain 103344 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU501216.1
Select seq gb|KY014327.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds	18755	18755	100%	0.0	99%	KY014327.1
Select seq gb|KY120348.1|	Zika virus isolate CIENI551, complete genome	18753	18753	100%	0.0	99%	KY120348.1
Select seq gb|KX879603.1|	Zika virus isolate SN062, complete genome	18753	18753	100%	0.0	99%	KX879603.1
Select seq gb|KX247632.1|	Zika virus isolate MEX_I_7 polyprotein gene, complete cds	18753	18753	100%	0.0	99%	KX247632.1
Select seq gb|KU937936.1|	Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds	18753	18753	100%	0.0	99%	KU937936.1
Select seq gb|KU501215.1|	Zika virus strain PRVABC59, complete genome	18753	18753	100%	0.0	99%	KU501215.1
Select seq gb|KX087101.3|	Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome	18748	18748	100%	0.0	99%	KX087101.3
Select seq gb|KY014315.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KY014315.1
Select seq gb|KX601168.1|	Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome	18748	18748	100%	0.0	99%	KX601168.1
Select seq gb|KU729217.2|	Zika virus isolate BeH823339 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KU729217.2
Select seq gb|KU527068.1|	Zika virus strain Natal RGN, complete genome	18748	18748	100%	0.0	99%	KU527068.1
Select seq gb|KX446951.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome	18742	18742	100%	0.0	99%	KX446951.2
Select seq gb|KX856011.1|	Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome	18742	18742	100%	0.0	99%	KX856011.1
Select seq gb|KX447517.1|	Zika virus isolate 1_0038_PF polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KX447517.1
Select seq gb|KX377337.1|	Zika virus strain PRVABC-59, complete genome	18742	18742	100%	0.0	99%	KX377337.1
Select seq gb|KU820898.1|	Zika virus isolate GZ01 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KU820898.1
Select seq gb|KX269878.1|	Zika virus isolate Haiti/2016/PD, complete genome	18739	18739	100%	0.0	99%	KX269878.1
Select seq gb|KX446950.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome	18737	18737	100%	0.0	99%	KX446950.2
Select seq gb|KY014304.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KY014304.1
Select seq gb|KX520666.1|	Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KX520666.1
Select seq gb|KU870645.1|	Zika virus isolate FB-GWUH-2016, complete genome	18737	18737	100%	0.0	99%	KU870645.1
Select seq gb|KY075939.1|	Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL08M polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY075939.1
Select seq gb|KY075933.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL008U polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY075933.1
Select seq gb|KY014296.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY014296.1
Select seq gb|KX806557.2|	Zika virus isolate TS17-2016, complete genome	18731	18731	100%	0.0	99%	KX806557.2
Select seq gb|KU926310.1|	Zika virus isolate Rio-S1, complete genome	18731	18731	100%	0.0	99%	KU926310.1
Select seq gb|KY075934.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL016U polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KY075934.1
Select seq gb|KX056898.1|	Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KX056898.1
Select seq gb|KU955590.1|	Zika virus isolate Z16019 polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KU955590.1
Select seq gb|KX766028.1|	Zika virus isolate R114916, complete genome	18722	18722	100%	0.0	99%	KX766028.1
Select seq gb|KY003153.1|	Zika virus strain ZIKV/34997/Pavia/2016 polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KY003153.1
Select seq gb|KU740184.2|	Zika virus isolate GD01 polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KU740184.2
Select seq gb|KU853013.1|	Zika virus isolate Dominican Republic/2016/PD2, complete genome	18720	18720	100%	0.0	99%	KU853013.1
Select seq gb|KU761564.1|	Zika virus isolate GDZ16001 polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KU761564.1
Select seq gb|KU853012.1|	Zika virus isolate Dominican Republic/2016/PD1, complete genome	18718	18718	100%	0.0	99%	KU853012.1
Select seq gb|KY014300.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KY014300.1
Select seq dbj|LC190723.1|	Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016	18715	18715	100%	0.0	99%	LC190723.1
Select seq gb|KY120349.1|	Zika virus isolate CIENI551, complete genome	18711	18711	100%	0.0	99%	KY120349.1
Select seq gb|KY014321.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds	18709	18709	100%	0.0	99%	KY014321.1
Select seq gb|KX766029.1|	Zika virus isolate R116265, complete genome	18709	18709	100%	0.0	99%	KX766029.1
Select seq gb|KY014295.1|	Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KY014295.1
Select seq gb|KX842449.2|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KX842449.2
Select seq gb|KY003154.1|	Zika virus strain ZIKV/VR10599/Pavia/2016 polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KY003154.1

Edited December 30, 2016 by niman

[niman]

Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds

GenBank: KY317937.1

FASTA Graphics

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LOCUS       KY317937               10462 bp    RNA     linear   VRL 27-DEC-2016
DEFINITION  Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se
            polyprotein gene, complete cds.
ACCESSION   KY317937
VERSION     KY317937.1
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10462)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Zika virus sequenced from Colombia, 2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10462)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2016) Department of Immunology and Microbial
            Science, The Scripps Research Institute, 10550 North Torrey Pines
            Road, IMM-210, La Jolla, CA 92037, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: NovoAlign v. V3.04
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10462
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="ZIKV/Homo_sapiens/Colombia/2016/ZC192Se"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Colombia"
                     /collection_date="07-Jan-2016"
                     /collected_by="Antibody Systems Inc"
     CDS             81..10352
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="APQ41783.1"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGAETSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMMGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKYKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVAKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 cgacagttcg agtttgaagc gaaagctagc aacagtatca acaggtttta ttttggattt
       61 ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa atccggagga ttccggattg
      121 tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt tgggggcttg aagaggctgc
      181 cagccggact tctgctgggt catgggccca tcaggatggt cttggcgatt ctagcctttt
      241 tgagattcac ggcaatcaag ccatcactgg gtctcatcaa tagatggggt tcagtgggga
      301 aaaaagaggc tatggaaata ataaagaagt tcaagaaaga tctggctgcc atgctgagaa
      361 taatcaatgc taggaaggag aagaagagac gaggcgcaga aactagtgtc ggaattgttg
      421 gcctcctgct gaccacagct atggcagcgg aggtcactag acgtgggagt gcatactata
      481 tgtacttgga cagaaacgat gctggggagg ccatatcttt tccaaccaca ttggggatga
      541 ataagtgtta tatacagatc atggatcttg gacacatgtg tgatgccacc atgagctatg
      601 aatgccctat gctggatgag ggggtggaac cagatgacgt cgattgttgg tgcaacacga
      661 cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa aggtgaagca cggagatcta
      721 gaagagccgt gacgctcccc tcccattcca ctaggaagct gcaaacgcgg tcgcaaacct
      781 ggttggaatc aagagaatac acaaagcact tgattagagt cgaaaattgg atattcagga
      841 accctggttt cgctttagca gcagctgcca tcgcgtggct tttgggaagc tcaacgagcc
      901 aaaaagtcat atacttggtc atgatactgc tgattgcccc ggcatacagc atcaggtgca
      961 taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg gttgatgttg
     1021 tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact gtcgacatag
     1081 agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc tatgaggcat
     1141 caatatcaga catggcttcg gacagccgct gcccaacaca aggtgaagcc taccttgaca
     1201 agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc tggggaaatg
     1261 gatgtggact ttttggcaaa gggagcctgg tgacatgcgc taagtttgca tgctccaaga
     1321 aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg ttgtcagttc
     1381 atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact gatgagaata
     1441 gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg gggggttttg
     1501 gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat ttgtattact
     1561 tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac attccattac
     1621 cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa gcactggtag
     1681 agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt tctagggagt caagaaggag
     1741 cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca aagggaaggc
     1801 tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg aagggcgtgt
     1861 catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa acactgcacg
     1921 ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag gttccagctc
     1981 agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc gctaaccccg
     2041 taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca ccatttgggg
     2101 actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg cacaggagtg
     2161 gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga atggcagtct
     2221 tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca ttgggcaagg
     2281 gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg tcctggttct
     2341 cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag aatggatcta
     2401 tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca gccgtctctg
     2461 ctgatgtggg gtgctcggtg gacttctcaa agaaggagac gagatgtggt acaggggtgt
     2521 tcgtctataa cgacgttgaa gcctggaggg acaggtacaa gtaccatcct gactcccccc
     2581 gtagattggc agcagcagtc aagcaagcct gggaagatgg tatctgcggg atctcctctg
     2641 tttcaagaat ggaaaacatc atgtggagat cagtagaagg ggagctcaac gcaatcctgg
     2701 aagagaatgg agttcaactg acggtcgttg tgggatctgt aaaaaacccc atgtggagag
     2761 gtccacagag attgcccgtg cctgtgaacg agctgcccca cggctggaag gcttggggga
     2821 aatcgtactt cgtcagagca gcaaagacaa ataacagctt tgtcgtggat ggtgacacac
     2881 tgaaggaatg cccactcaaa catagagcat ggaacagctt tcttgtggag gatcatgggt
     2941 tcggggtatt tcacactagt gtctggctca aggttagaga agattattca ttagagtgtg
     3001 atccagccgt tattggaaca gctgttaagg gaaaggaggc tgtacacagt gatctaggct
     3061 actggattga gagtgagaag aatgacacat ggaggctgaa gagggcccat ctgatcgaga
     3121 tgaaaacatg tgaatggcca aagtcccaca cattgtggac agatggaata gaagagagtg
     3181 atctgatcat acccaagtct ttagctgggc cactcagcca tcacaatacc agagagggct
     3241 acaggaccca aatgaaaggg ccatggcaca gtgaagagct tgaaattcgg tttgaggaat
     3301 gcccaggcac taaggtccac gtggaggaaa catgtggaac aagaggacca tctctgagat
     3361 caaccactgc aagcggaagg gtgatcgagg aatggtgctg cagggagtgc acaatgcccc
     3421 cactgtcgtt ctgggctaaa gatggctgtt ggtatggaat ggagataagg cccaggaaag
     3481 aaccagaaag caacttagta aggtcaatgg tgactgcagg atcaactgat cacatggatc
     3541 acttctccct tggagtgctt gtgattctgc tcatggtgca ggaagggctg aagaagagaa
     3601 tgaccacaaa gatcatcata agcacatcaa tggcagtgct ggtagctatg atcctgggag
     3661 gattttcaat gagtgacctg gctaagcttg caattttgat gggtgccacc ttcgcggaaa
     3721 tgaacactgg aggagatgta gctcatctgg cgctgatagc ggcattcaaa gtcagaccag
     3781 cgttgctggt atctttcatc ttcagagcta attggacacc ccgtgaaagc atgctgctgg
     3841 ccttggcctc gtgtcttttg caaactgcga tctctgcctt ggaaggcgac ctgatggttc
     3901 tcatcaatgg ttttgctttg gcctggttgg caatacgagc gatggttgtt ccacgcactg
     3961 acaacatcac cttggcaatc ctggctgctc tgacaccact ggcccggggc acactgcttg
     4021 tggcgtggag agcaggcctt gctacttgcg gggggtttat gctcctctct ctgaagggaa
     4081 aaggcagtgt gaagaagaac ttaccatttg tcatggccct gggactaacc gctgtgaggc
     4141 tggtcgaccc catcaacgtg gtgggactgc tgttgctcac aaggagtggg aagcggagct
     4201 ggccccctag cgaagtactc acagctgttg gcctgatatg cgcattggct ggagggttcg
     4261 ccaaggcaga tatagagatg gctgggccca tggccgcggt cggtctgcta attgtcagtt
     4321 acgtggtctc aggaaagagt gtggacatgt acattgaaag agcaggtgac atcacatggg
     4381 aaaaagatgc ggaagtcact ggaaacagtc cccggctcga cgtggcgcta gatgagagtg
     4441 gtgatttctc cctggtggag gatgacggtc cccccatgag agagatcata ctcaaggtgg
     4501 tcctgatgac catctgtggc atgaacccaa tagccatacc ctttgcagct ggagcgtggt
     4561 acgtatacgt gaagactgga aaaaggagtg gtgctctatg ggatgtgcct gctcccaagg
     4621 aagtaaaaaa gggggagacc acagatggag tgtacagagt aatgactcgt agactgctag
     4681 gttcaacaca agttggagtg ggagttatgc aagagggggt ctttcacact atgtggcacg
     4741 tcacaaaagg atccgcgctg agaagcggtg aagggagact tgatccatac tggggagatg
     4801 tcaagcagga tctggtgtca tactgtggtc catggaagct agatgccgcc tgggacggac
     4861 acagcgaggt gcagctcttg gccgtgcccc ccggagagag agcgaggaac atccagactc
     4921 tgcccggaat atttaagaca aaggatgggg acattggagc ggttgcgctg gattacccag
     4981 caggaacttc aggatctcca atcctagaca agtgtgggag agtgatagga ctttatggca
     5041 atggggtcgt gatcaaaaat gggagttatg ttagtgccat cacccaaggg aggagggagg
     5101 aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa gaagaagcag ctaactgtct
     5161 tagacttgca tcctggagct gggaaaacca ggagagttct tcctgaaata gttcgtgaag
     5221 ccataaaaac aagactccgt actgtgatct tagctccaac cagggttgtc gctgctgaaa
     5281 tggaggaagc ccttagaggg cttccagtgc gttatatgac aacagcagtc aatgtcaccc
     5341 actctggaac agaaatcgtc gacttaatgt gccatgccac cttcacttca cgtctactac
     5401 agccaatcag agtccccaac tataatctgt atattatgga tgaggcccac ttcacagatc
     5461 cctcaagtat agcagcaaga ggatacattt caacaagggt tgagatgggc gaagcggctg
     5521 ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc atttccggac tccaactcac
     5581 caattatgga caccgaagtg gaagtcccag agagagcctg gagctcaggc tttgattggg
     5641 tgacggatca ttctggaaaa acagtttggt ttgttccaag cgtgaggaac ggcaatgaga
     5701 tcgcagcttg tctgacaaag gctggaaaac gggtcataca gctcagcaga aagacttttg
     5761 agacagagtt ccagaaaaca aaacatcaag agtgggactt tgtcgtgaca actgacattt
     5821 cagagatggg cgccaacttt aaagctgacc gtgtcataga ttccaggaga tgcctaaagc
     5881 cggtcatact tgatggcgag agagtcattc tggctggacc catgcctgtc acacatgcca
     5941 gcgctgccca gaggaggggg cgcataggca ggaatcccaa taaacctgga gatgagtatc
     6001 tgtatggagg tgggtgcgca gagactgacg aagaccatgc acactggctt gaagcaagaa
     6061 tgctccttga caatatttac ctccaagatg gcctcatagc ctcgctctat cgacctgagg
     6121 ccgacaaagt agcagccatt gagggagagt tcaagcttag gacggagcaa aggaagacct
     6181 ttgtggaact catgaaaaga ggagatcttc ctgtttggct ggcctatcag gttgcatctg
     6241 ccggaataac ctacacagat agaagatggt gctttgatgg cacgaccaac aacaccataa
     6301 tggaagacag tgtgccggca gaggtgtgga ccagacacgg agagaaaaga gtgctcaaac
     6361 cgaggtggat ggacgccaga gtttgttcag atcatgcggc cctgaagtca ttcaaggagt
     6421 ttgccgctgg gaaaagagga gcggcttttg gagtgatgga agccctggga acactgccag
     6481 gacacatgac agagagattc caggaagcca ttgacaacct cgctgtgctc atgcgggcag
     6541 agactggaag caggccttac aaagccgcgg cggcccaatt gccggagacc ctagagacca
     6601 ttatgctttt ggggttgctg ggaacagtct cgctgggaat ctttttcgtc ttgatgagga
     6661 acaagggcat agggaagatg ggctttggaa tggtgactct tggggccagc gcatggctca
     6721 tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt cctcattgtt gtgttcctat
     6781 tgctggtggt gctcatacct gagccagaaa agcaaagatc tccccaggac aaccaaatgg
     6841 caatcatcat catggtagca gtaggtcttc tgggcttgat taccgccaat gaactcggat
     6901 ggttggagag aacaaagagt gacctaagcc atctaatggg aaggagagag gagggggcaa
     6961 ccataggatt ctcaatggac attgacctgc ggccagcctc agcttgggcc atctatgctg
     7021 ccttgacaac tttcattacc ccagccgtcc aacatgcagt gaccacttca tacaacaact
     7081 actccttaat ggcgatggcc acgcaagctg gagtgttgtt tggtatgggc aaagggatgc
     7141 cattctacgc atgggacttt ggagtcccgc tgctaatgat gggttgctac tcacaattaa
     7201 cacccctgac cctaatagtg gccatcattt tgctcgtggc gcactacatg tacttgatcc
     7261 cagggctgca ggcagcagct gcgcgtgctg cccagaagag aacggcagct ggcatcatga
     7321 agaaccctgt tgtggatgga atagtggtga ctgacattga cacaatgaca attgaccccc
     7381 aagtggagaa aaagatggga caggtgctac tcatagcagt agccgtctcc agcgccatac
     7441 tgtcgcggac cgcctggggg tggggggagg ctggggccct gatcacagcc gcaacttcca
     7501 ctttgtggga aggctctccg aacaagtact ggaactcctc tacagccact tcactgtgta
     7561 acatttttag gggaagttac ttggctggag cttctctaat ctacacagta acaagaaacg
     7621 ctggcttggt caagagacgt gggggtggaa caggagagac cctgggagag aaatggaagg
     7681 cccgtttgaa ccagatgtcg gccctggagt tctactccta caaaaagtca ggcatcaccg
     7741 aggtgtgcag agaagaggct cgccgcgccc tcaaggacgg tgtggcaacg ggaggccatg
     7801 ctgtgtcccg aggaagtgca aagctgagat ggttggtgga gcggggatac ctgcagccct
     7861 atggaaaggt cattgatctt ggatgtggca gagggggctg gagttactac gccgccacca
     7921 tccgcaaagt tcaagaagtg aaaggataca caaaaggagg ccctggtcat gaagaacccg
     7981 tgttggtgca aagctatggg tggaacatag tccgtcttaa gagtggggtg gacgtctttc
     8041 atatggcggc tgagccgtgt gacacgttgc tgtgtgacat aggtgagtca tcatctagtc
     8101 ctgaagtgga agaagcacgg acgctcagag tcctctccat ggtgggggat tggcttgaaa
     8161 aaagaccagg agccttttgt ataaaagtgt tgtgcccata caccagcact atgatggaaa
     8221 ccctggagcg actgcagcgt aggtatgggg gaggactggt cagagtgcca ctctcccgca
     8281 actctacaca tgagatgtac tgggtctctg gagcgaaaag caacaccata aaaagtgtgt
     8341 ccaccacgag ccagctcctc ttggggcgca tggacgggcc taggaggcca gtgaaatatg
     8401 aggaggatgt gaatctcggc tctggcacgc gggctgtggt aagctgcgct gaagctccca
     8461 acatgaagat cattggtaac cgcattgaaa ggatccgcag tgagcacgcg gaaacgtggt
     8521 tctttgatga gaaccaccca tataggacat gggcttacca tggaagctat gaggccccca
     8581 cacaagggtc agcgtcctct ctaataaacg gggttgtcag gctcctgtca aaaccctggg
     8641 atgtggtgac tggagtcaca ggaatagcca tgaccgacac cacaccgtat ggtcagcaaa
     8701 gagttttcaa ggaaaaagtg gacactaggg tgccagaccc ccaagaaggc actcgtcagg
     8761 ttatgagcat ggtctcttcc tggttgtgga aagagctagg caaatacaaa cggccacgag
     8821 tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa tgcagcatta ggggcaatat
     8881 ttgaagagga aaaagagtgg aagactgcag tggaagctgt gaacgatcca aggttctggg
     8941 ctctagtgga caaggaaaga gagcaccacc tgagaggaga gtgccagagt tgtgtgtaca
     9001 acatgatggg aaaaagagaa aagaaacaag gggaatttgg aaaggccaag ggcagccgcg
     9061 ccatctggta tatgtggcta ggggctagat ttctagagtt cgaagccctt ggattcttga
     9121 acgaggatca ctggatgggg agagagaact caggaggtgg tgttgaaggg ctgggattac
     9181 aaagactcgg atatgtccta gaagagatga gtcgcatacc aggaggaagg atgtatgcag
     9241 atgacactgc tggctgggac acccgcatca gcaggtttga tctggagaat gaagctctaa
     9301 tcaccaacca aatggagaaa gggcacaggg ccttggcatt ggccataatc aagtacacat
     9361 accaaaacaa agtggtaaag gtccttagac cagctgaaaa agggaaaaca gttatggaca
     9421 ttatttcgag acaagaccaa agggggagcg gacaagttgt cacttacgct cttaacacat
     9481 ttaccaacct agtggtgcaa ctcattcgga atatggaggc tgaggaagtt ctagagatgc
     9541 aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa ctggttgcag agcaacggat
     9601 gggataggct caaacgaatg gcagtcagtg gagatgattg cgttgtgaag ccaattgatg
     9661 ataggtttgc acatgccctc aggttcttga atgatatggg aaaagttagg aaggacacac
     9721 aagagtggaa accctcaact ggatgggaca actgggaaga agttccgttt tgctcccacc
     9781 acttcaacaa gctccatctc aaggacggga ggtccattgt ggttccctgc cgccaccaag
     9841 atgaactgat tggccgggcc cgcgtctctc caggggcggg atggagcatc cgggagactg
     9901 cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct ttatttccac agaagggacc
     9961 tccgactgat ggccaatgcc atttgttcat ctgtgccagt tgactgggtt ccaactggga
    10021 gaactacctg gtcaatccat ggaaagggag aatggatgac cactgaagac atgcttgtgg
    10081 tgtggaacag agtgtggatt gaggagaacg accacatgga agacaagacc ccagttgcga
    10141 aatggacaga cattccctat ttgggaaaaa gggaagactt gtggtgtgga tctctcatag
    10201 ggcacagacc gcgcaccacc tgggctgaga acattaaaaa cacagtcaac atggtgcgca
    10261 ggatcatagg tgatgaagaa aagtacatgg actacctatc cacccaagtt cgctacttgg
    10321 gtgaagaagg gtctacacct ggagtgctgt aagcaccaat cttaatgttg tcaggcctgc
    10381 tagtcagcca cagcttgggg aaagctgtgc agcctgtgac ccccccagga gaagctggga
    10441 aaccaagcct atagtcaggc cg

[niman]

Sequences producing significant alignments:

Select:AllNone Selected:0

AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments

Sequences producing significant alignments:

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
Select seq gb|KY317937.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds	18969	18969	100%	0.0	100%	KY317937.1
Select seq gb|KU647676.1|	Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds	18897	18897	100%	0.0	99%	KU647676.1
Select seq gb|KY317938.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds	18881	18881	100%	0.0	99%	KY317938.1
Select seq gb|KY014303.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds	18875	18875	100%	0.0	99%	KY014303.1
Select seq gb|KU922960.1|	Zika virus isolate MEX/InDRE/Sm/2016, complete genome	18875	18875	100%	0.0	99%	KU922960.1
Select seq gb|KX198135.2|	Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome	18870	18870	100%	0.0	99%	KX198135.2
Select seq gb|KU922923.1|	Zika virus isolate MEX/InDRE/Lm/2016, complete genome	18870	18870	100%	0.0	99%	KU922923.1
Select seq gb|KY317939.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds	18866	18866	100%	0.0	99%	KY317939.1
Select seq gb|KX156776.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome	18859	18859	100%	0.0	99%	KX156776.2
Select seq gb|KY317936.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds	18853	18853	100%	0.0	99%	KY317936.1
Select seq gb|KX156774.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome	18853	18853	100%	0.0	99%	KX156774.2
Select seq gb|KY317940.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds	18848	18848	100%	0.0	99%	KY317940.1
Select seq gb|KX156775.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome	18848	18848	100%	0.0	99%	KX156775.2
Select seq gb|KX087102.2|	Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome	18848	18848	100%	0.0	99%	KX087102.2
Select seq gb|KU820897.5|	Zika virus isolate FLR polyprotein gene, complete cds	18848	18848	100%	0.0	99%	KU820897.5
Select seq gb|KX548902.1|	Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds	18848	18848	100%	0.0	99%	KX548902.1
Select seq gb|KX247646.1|	Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome	18848	18848	100%	0.0	99%	KX247646.1
Select seq gb|KY075932.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL001Sa polyprotein gene, complete cds	18825	18825	100%	0.0	99%	KY075932.1
Select seq gb|KX893855.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome	18818	18818	100%	0.0	99%	KX893855.1
Select seq gb|KX702400.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome	18814	18814	100%	0.0	99%	KX702400.1
Select seq gb|KX447510.1|	Zika virus isolate 1_0049_PF polyprotein gene, complete cds	18814	18814	100%	0.0	99%	KX447510.1
Select seq gb|KU991811.1|	Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KU991811.1
Select seq gb|KX447512.1|	Zika virus isolate 1_0181_PF polyprotein gene, complete cds	18803	18803	100%	0.0	99%	KX447512.1
Select seq gb|KX369547.1|	Zika virus strain PF13/251013-18, complete genome	18803	18803	100%	0.0	99%	KX369547.1
Select seq gb|KU509998.3|	Zika virus strain Haiti/1225/2014, complete genome	18803	18803	100%	0.0	99%	KU509998.3
Select seq gb|KJ776791.2|	Zika virus strain H/PF/2013, complete genome	18798	18798	100%	0.0	99%	KJ776791.2
Select seq gb|KX447509.1|	Zika virus isolate 1_0087_PF polyprotein gene, complete cds	18798	18798	100%	0.0	99%	KX447509.1
Select seq gb|KX447513.1|	Zika virus isolate 1_0134_PF polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KX447513.1
Select seq gb|KR872956.1|	Zika virus strain 17829 polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KR872956.1
Select seq gb|KX197205.1|	Zika virus isolate 9, complete genome	18787	18787	100%	0.0	99%	KX197205.1
Select seq gb|KX447515.1|	Zika virus isolate 1_0030_PF polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KX447515.1
Select seq gb|KX447511.1|	Zika virus isolate 1_0015_PF polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KX447511.1
Select seq gb|KX280026.1|	Zika virus isolate Paraiba_01, complete genome	18787	18787	100%	0.0	99%	KX280026.1
Select seq gb|KU321639.1|	Zika virus strain ZikaSPH2015, complete genome	18787	18787	100%	0.0	99%	KU321639.1
Select seq gb|KX447514.1|	Zika virus isolate 1_0035_PF polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KX447514.1
Select seq gb|KX051563.1|	Zika virus isolate Haiti/1/2016, complete genome	18781	18781	100%	0.0	99%	KX051563.1
Select seq gb|KX447516.1|	Zika virus isolate 1_0111_PF polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KX447516.1
Select seq gb|KU729218.1|	Zika virus isolate BeH828305 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU729218.1
Select seq gb|KU707826.1|	Zika virus isolate SSABR1, complete genome	18776	18776	100%	0.0	99%	KU707826.1
Select seq gb|KU365779.1|	Zika virus strain BeH819966 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU365779.1
Select seq gb|KX262887.1|	Zika virus isolate 103451, complete genome	18770	18770	100%	0.0	99%	KX262887.1
Select seq gb|KX197192.1|	Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome	18770	18770	100%	0.0	99%	KX197192.1
Select seq gb|KU497555.1|	Zika virus isolate Brazil-ZKV2015, complete genome	18766	18766	99%	0.0	99%	KU497555.1
Select seq gb|KX811222.1|	Zika virus isolate Brazil_2015_MG, complete genome	18764	18764	100%	0.0	99%	KX811222.1
Select seq gb|KX694534.2|	Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome	18759	18759	100%	0.0	99%	KX694534.2
Select seq gb|KX879604.1|	Zika virus isolate SN089, complete genome	18759	18759	100%	0.0	99%	KX879604.1
Select seq gb|KU926309.1|	Zika virus isolate Rio-U1, complete genome	18759	18759	100%	0.0	99%	KU926309.1
Select seq gb|KU365780.1|	Zika virus strain BeH815744 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU365780.1
Select seq gb|KU940228.1|	Zika virus isolate Bahia07, partial genome	18753	18753	100%	0.0	99%	KU940228.1
Select seq gb|KU365777.1|	Zika virus strain BeH818995 polyprotein gene, complete cds	18753	18753	100%	0.0	99%	KU365777.1
Select seq gb|KY328289.1|	Zika virus isolate HN16, complete genome	18748	18748	100%	0.0	99%	KY328289.1
Select seq gb|KX879603.1|	Zika virus isolate SN062, complete genome	18748	18748	100%	0.0	99%	KX879603.1
Select seq gb|KU758877.1|	Zika virus isolate 17271 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KU758877.1
Select seq gb|KU501217.1|	Zika virus strain 8375 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KU501217.1
Select seq gb|KY014297.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds	18746	18746	100%	0.0	99%	KY014297.1
Select seq gb|KU729217.2|	Zika virus isolate BeH823339 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KU729217.2
Select seq gb|KU527068.1|	Zika virus strain Natal RGN, complete genome	18742	18742	100%	0.0	99%	KU527068.1
Select seq gb|KU501216.1|	Zika virus strain 103344 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KU501216.1
Select seq gb|KY014327.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds	18739	18739	100%	0.0	99%	KY014327.1
Select seq gb|KY120348.1|	Zika virus isolate CIENI551, complete genome	18737	18737	100%	0.0	99%	KY120348.1
Select seq gb|KX447517.1|	Zika virus isolate 1_0038_PF polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KX447517.1
Select seq gb|KX247632.1|	Zika virus isolate MEX_I_7 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KX247632.1
Select seq gb|KU365778.1|	Zika virus strain BeH819015 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KU365778.1
Select seq gb|KU312312.1|	Zika virus isolate Z1106033 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KU312312.1
Select seq gb|KX269878.1|	Zika virus isolate Haiti/2016/PD, complete genome	18733	18733	100%	0.0	99%	KX269878.1
Select seq gb|KY014315.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY014315.1
Select seq gb|KY014304.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY014304.1
Select seq gb|KX520666.1|	Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KX520666.1
Select seq gb|KU870645.1|	Zika virus isolate FB-GWUH-2016, complete genome	18731	18731	100%	0.0	99%	KU870645.1
Select seq gb|KX446951.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome	18726	18726	100%	0.0	99%	KX446951.2
Select seq gb|KY014296.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KY014296.1
Select seq gb|KX806557.2|	Zika virus isolate TS17-2016, complete genome	18726	18726	100%	0.0	99%	KX806557.2
Select seq gb|KX856011.1|	Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome	18726	18726	100%	0.0	99%	KX856011.1
Select seq gb|KU937936.1|	Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KU937936.1
Select seq gb|KU926310.1|	Zika virus isolate Rio-S1, complete genome	18726	18726	100%	0.0	99%	KU926310.1
Select seq gb|KU501215.1|	Zika virus strain PRVABC59, complete genome	18726	18726	100%	0.0	99%	KU501215.1
Select seq gb|KX446950.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome	18720	18720	100%	0.0	99%	KX446950.2
Select seq gb|KX087101.3|	Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome	18720	18720	100%	0.0	99%	KX087101.3
Select seq gb|KX601168.1|	Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome	18720	18720	100%	0.0	99%	KX601168.1
Select seq gb|KY003153.1|	Zika virus strain ZIKV/34997/Pavia/2016 polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KY003153.1
Select seq gb|KX377337.1|	Zika virus strain PRVABC-59, complete genome	18715	18715	100%	0.0	99%	KX377337.1
Select seq gb|KU820898.1|	Zika virus isolate GZ01 polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KU820898.1
Select seq gb|KU853013.1|	Zika virus isolate Dominican Republic/2016/PD2, complete genome	18715	18715	100%	0.0	99%	KU853013.1
Select seq gb|KU853012.1|	Zika virus isolate Dominican Republic/2016/PD1, complete genome	18713	18713	100%	0.0	99%	KU853012.1
Select seq gb|KY014300.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds	18709	18709	100%	0.0	99%	KY014300.1
Select seq dbj|LC190723.1|	Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016	18709	18709	100%	0.0	99%	LC190723.1
Select seq gb|KY075939.1|	Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL08M polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KY075939.1
Select seq gb|KY075933.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL008U polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KY075933.1
Select seq gb|KY014321.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KY014321.1
Select seq gb|KY075934.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL016U polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KY075934.1
Select seq gb|KY014295.1|	Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KY014295.1
Select seq gb|KX842449.2|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KX842449.2
Select seq gb|KX056898.1|	Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KX056898.1
Select seq gb|KU955590.1|	Zika virus isolate Z16019 polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KU955590.1
Select seq gb|KY120349.1|	Zika virus isolate CIENI551, complete genome	18694	18694	100%	0.0	99%	KY120349.1
Select seq gb|KX766028.1|	Zika virus isolate R114916, complete genome	18694	18694	100%	0.0	99%	KX766028.1
Select seq gb|KY003154.1|	Zika virus strain ZIKV/VR10599/Pavia/2016 polyprotein gene, complete cds	18692	18692	100%	0.0	99%	KY003154.1
Select seq gb|KX766029.1|	Zika virus isolate R116265, complete genome	18692	18692	100%	0.0	99%	KX766029.1
Select seq gb|KU740184.2|	Zika virus isolate GD01 polyprotein gene, complete cds	18692	18692	100%	0.0	99%	KU740184.2
Select seq gb|KU761564.1|	Zika virus isolate GDZ16001 polyprotein gene, complete cds	18692	18692	100%	0.0	99%	KU761564.1

[niman]

LOCUS       KY317940               10391 bp    RNA     linear   VRL 27-DEC-2016
DEFINITION  Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se
            polyprotein gene, complete cds.
ACCESSION   KY317940
VERSION     KY317940.1
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10391)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Zika virus sequenced from Colombia, 2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10391)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2016) Department of Immunology and Microbial
            Science, The Scripps Research Institute, 10550 North Torrey Pines
            Road, IMM-210, La Jolla, CA 92037, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: NovoAlign v. V3.04
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10391
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="ZIKV/Homo_sapiens/Colombia/2016/ZC207Se"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Colombia"
                     /collection_date="09-Jan-2016"
                     /collected_by="Antibody Systems Inc"
     CDS             82..10353
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="APQ41786.1"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGAETSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVAKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gcgacagttc gagtttgaag cgaaagctag caacagtatc aacaggtttt attttggatt
       61 tggaaacgag agtttctggt catgaaaaac ccaaaaaaga aatccggagg attccggatt
      121 gtcaatatgc taaaacgcgg agtagcccgt gtgagcccct ttgggggctt gaagaggctg
      181 ccagccggac ttctgctggg tcatgggccc atcaggatgg tcttggcgat tctagccttt
      241 ttgagattca cggcaatcaa gccatcactg ggtctcatca atagatgggg ttcagtgggg
      301 aaaaaagagg ctatggaaat aataaagaag ttcaagaaag atctggctgc catgctgaga
      361 ataatcaatg ctaggaagga gaagaagaga cgaggcgcag aaactagtgt cggaattgtt
      421 ggcctcctgc tgaccacagc tatggcagcg gaggtcacta gacgtgggag tgcatactat
      481 atgtacttgg acagaaacga tgctggggag gccatatctt ttccaaccac attggggatg
      541 aataagtgtt atatacagat catggatctt ggacacatgt gtgatgccac catgagctat
      601 gaatgcccta tgctggatga gggggtggaa ccagatgacg tcgattgttg gtgcaacacg
      661 acgtcaactt gggttgtgta cggaacctgc catcacaaaa aaggtgaagc acggagatct
      721 agaagagccg tgacgctccc ctcccattcc actaggaagc tgcaaacgcg gtcgcaaacc
      781 tggttggaat caagagaata cacaaagcac ttgattagag tcgaaaattg gatattcagg
      841 aaccctggtt tcgctttagc agcagctgcc atcgcttggc ttttgggaag ctcaaccagc
      901 caaaaagtca tatacttggt catgatactg ctgattgccc cggcatacag catcaggtgc
      961 ataggagtca gcaataggga ctttgtggaa ggtatgtcag gtgggacttg ggttgatgtt
     1021 gtcttggaac atggaggttg tgtcaccgta atggcacagg acaaaccgac tgtcgacata
     1081 gagctggtta caacaacagt cagcaacatg gcggaggtaa gatcctactg ctatgaggca
     1141 tcaatatcag acatggcttc ggacagccgc tgcccaacac aaggtgaagc ctaccttgac
     1201 aagcaatcag acactcaata tgtctgcaaa agaacgttag tggacagagg ctggggaaat
     1261 ggatgtggac tttttggcaa agggagcctg gtgacatgcg ctaagtttgc atgctccaag
     1321 aaaatgaccg ggaagagcat ccagccagag aatctggagt accggataat gttgtcagtt
     1381 catggctccc agcacagtgg gatgatcgtt aatgacacag gacatgaaac tgatgagaat
     1441 agagcgaagg ttgagataac gcccaattca ccaagagccg aagccaccct ggggggtttt
     1501 ggaagcctag gacttgattg tgaaccgagg acaggccttg acttttcaga tttgtattac
     1561 ttgactatga ataacaagca ctggttggtt cacaaggagt ggttccacga cattccatta
     1621 ccttggcacg ctggggcaga caccggaact ccacactgga acaacaaaga agcactggta
     1681 gagttcaagg acgcacatgc caaaaggcaa actgtcgtgg ttctagggag tcaagaagga
     1741 gcagttcaca cggcccttgc tggagctctg gaggctgaga tggatggtgc aaagggaagg
     1801 ctgtcctctg gccacttgaa atgtcgcctg aaaatggata aacttagatt gaagggcgtg
     1861 tcatactcct tgtgtaccgc agcgttcaca ttcaccaaga tcccggctga aacactgcac
     1921 gggacagtca cagtggaggt acagtacgca gggacagatg gaccttgcaa ggttccagct
     1981 cagatggcgg tggacatgca aactctgacc ccagttggga ggttgataac cgctaacccc
     2041 gtaatcactg aaagcactga gaactctaag atgatgctgg aacttgatcc accatttggg
     2101 gactcttaca ttgtcatagg agtcggggag aagaagatca cccaccactg gcacaggagt
     2161 ggcagcacca ttggaaaagc atttgaagcc actgtgagag gtgccaagag aatggcagtc
     2221 ttgggagaca cagcctggga ctttggatca gttggaggcg ctctcaactc attgggcaag
     2281 ggcatccatc aaatttttgg agcagctttc aaatcattgt ttggaggaat gtcctggttc
     2341 tcacaaattc tcattggaac gttgctgatg tggttgggtc tgaacacaaa gaatggatct
     2401 atttccctta tgtgcttggc cttaggggga gtgttgatct tcttatccac agccgtctct
     2461 gctgatgtgg ggtgctcggt ggacttctca aagaaggaga cgagatgtgg tacaggggtg
     2521 ttcgtctata acgacgttga agcctggagg gacaggtaca agtaccatcc tgactccccc
     2581 cgtagattgg cagcagcagt caagcaagcc tgggaagatg gtatctgcgg gatctcctct
     2641 gtttcaagaa tggaaaacat catgtggaga tcagtagaag gggagctcaa cgcaatcctg
     2701 gaagagaatg gagttcaact gacggtcgtt gtgggatctg taaaaaaccc catgtggaga
     2761 ggtccacaga gattgcccgt gcctgtgaac gagctgcccc acggctggaa ggcttggggg
     2821 aaatcgtact tcgtcagagc agcaaagaca aataacagct ttgtcgtgga tggtgacaca
     2881 ctgaaggaat gcccactcaa acatagagca tggaacagct ttcttgtgga ggatcatggg
     2941 ttcggggtat ttcacactag tgtctggctc aaggttagag aagattattc attagagtgt
     3001 gatccagccg ttattggaac agctgttaag ggaaaggagg ctgtacacag tgatctaggc
     3061 tactggattg agagtgagaa gaatgacaca tggaggctga agagggccca tctgatcgag
     3121 atgaaaacat gtgaatggcc aaagtcccac acattgtgga cagatggaat agaagagagt
     3181 gatctgatca tacccaagtc tttagctggg ccactcagcc atcacaatac cagagagggc
     3241 tacaggaccc aaatgaaagg gccatggcac agtgaagagc ttgaaattcg gtttgaggaa
     3301 tgcccaggca ctaaggtcca cgtggaggaa acatgtggaa caagaggacc atctctgaga
     3361 tcaaccactg caagcggaag ggtgatcgag gaatggtgct gcagggagtg cacaatgccc
     3421 ccactgtcgt tctgggctaa agatggctgt tggtatggaa tggagataag gcccaggaaa
     3481 gaaccagaaa gcaacttagt aaggtcaatg gtgactgcag gatcaactga tcacatggat
     3541 cacttctccc ttggagtgct tgtgattctg ctcatggtgc aggaagggct gaagaagaga
     3601 atgaccacaa agatcatcat aagcacatca atggcagtgc tggtagctat gatcctggga
     3661 ggattttcaa tgagtgacct ggctaagctt gcaattttga tgggtgccac cttcgcggaa
     3721 atgaacactg gaggagatgt agctcatctg gcgctgatag cggcattcaa agtcagacca
     3781 gcgttgctgg tatctttcat cttcagagct aattggacac cccgtgaaag catgctgctg
     3841 gccttggcct cgtgtctttt gcaaactgcg atctccgcct tggagggcga cctgatggtt
     3901 ctcatcaatg gttttgcttt ggcctggttg gcaatacgag cgatggttgt tccacgcact
     3961 gacaacatca ccttggcaat cctggctgct ctgacaccac tggcccgggg cacactgctt
     4021 gtggcgtgga gagcaggcct tgctacttgc ggggggttta tgctcctctc tctgaaggga
     4081 aaaggcagtg tgaagaagaa cttaccattt gtcatggccc tgggactaac cgctgtgagg
     4141 ctggtcgacc ccatcaacgt ggtgggactg ctgttgctca caaggagtgg gaagcggagc
     4201 tggcccccta gcgaagtact cacagctgtt ggcctgatat gcgcattggc tggagggttc
     4261 gccaaggcag atatagagat ggctgggccc atggccgcgg tcggtctgct aattgtcagt
     4321 tacgtggtct caggaaagag tgtggacatg tacattgaaa gagcaggtga catcacatgg
     4381 gaaaaagatg cggaagtcac tggaaacagt ccccggctcg atgtggcgct agatgagagt
     4441 ggtgatttct ccctggtgga ggatgacggt ccccccatga gagagatcat actcaaggtg
     4501 gtcctgatga ccatctgtgg catgaaccca atagccatac cctttgcagc tggagcgtgg
     4561 tacgtatacg tgaagactgg aaaaaggagt ggtgctctat gggatgtgcc tgctcccaag
     4621 gaagtaaaaa agggggagac cacagatgga gtgtacagag taatgactcg tagactgcta
     4681 ggttcaacac aagttggagt gggagttatg caagaggggg tctttcacac tatgtggcac
     4741 gtcacaaaag gatccgcgct gagaagcggt gaagggagac ttgatccata ctggggagat
     4801 gtcaagcagg atctggtgtc atactgtggt ccatggaagc tagatgccgc ctgggacggg
     4861 cacagcgagg tgcagctctt ggccgtgccc cccggagaga gagcgaggaa catccagact
     4921 ctgcccggaa tatttaagac aaaggatggg gacattggag cggttgcgct ggattaccca
     4981 gcaggaactt caggatctcc aatcctagac aagtgtggga gagtgatagg actttatggc
     5041 aatggggtcg tgatcaaaaa tgggagttat gttagtgcca tcacccaagg gaggagggag
     5101 gaagagactc ctgttgagtg cttcgagcct tcgatgctga agaagaagca gctaactgtc
     5161 ttagacttgc atcctggagc tgggaaaacc aggagagttc ttcctgaaat agtccgtgaa
     5221 gccataaaaa caagactccg tactgtgatc ttagctccaa ccagggttgt cgctgctgaa
     5281 atggaggagg cccttagagg gcttccagtg cgttatatga caacagcagt caatgtcacc
     5341 cactctggaa cagaaatcgt cgacttaatg tgccatgcca ccttcacttc acgtctacta
     5401 cagccaatca gagtccccaa ctataatctg tacattatgg atgaggccca cttcacagat
     5461 ccctcaagta tagcagcaag aggatacatt tcaacaaggg ttgagatggg cgaggcggct
     5521 gccatcttca tgaccgccac gccaccagga acccgtgacg catttccgga ctccaactca
     5581 ccaattatgg acaccgaagt ggaagtccca gagagagcct ggagctcagg ctttgattgg
     5641 gtgacggatc attctggaaa aacagtttgg tttgttccaa gcgtgaggaa cggcaatgag
     5701 atcgcagctt gtctgacaaa ggctggaaaa cgggtcatac agctcagcag aaagactttt
     5761 gagacagagt tccagaaaac aaaacatcaa gagtgggact ttgtcgtgac aactgacatt
     5821 tcagagatgg gcgccaactt taaagctgac cgtgtcatag attccaggag atgcctaaag
     5881 ccggtcatac ttgatggcga gagagtcatt ctggctggac ccatgcctgt cacacatgcc
     5941 agcgctgccc agaggagggg gcgcataggc aggaatccca ataaacctgg agatgagtat
     6001 ctgtatggag gtgggtgcgc agagactgac gaagaccatg cacactggct tgaagcaaga
     6061 atgctccttg acaatattta cctccaagat ggcctcatag cctcgctcta tcgacctgag
     6121 gccgacaaag tagcagccat tgagggagag ttcaagctta ggacggagca aaggaagacc
     6181 tttgtggaac tcatgaaaag aggagatctt cctgtttggc tggcctatca ggttgcatct
     6241 gccggaataa cctacacaga tagaagatgg tgctttgatg gcacgaccaa caacaccata
     6301 atggaagaca gtgtgccggc agaggtgtgg accagacacg gagagaaaag agtgctcaaa
     6361 ccgaggtgga tggacgccag agtttgttca gatcatgcgg ccctgaagtc attcaaggag
     6421 tttgccgctg ggaaaagagg agcggctttt ggagtgatgg aagccctggg aacactgcca
     6481 ggacacatga cagagagatt ccaggaagcc attgacaacc tcgctgtgct catgcgggca
     6541 gagactggaa gcaggcctta caaagccgcg gcggcccaat tgccggagac cctagagacc
     6601 attatgcttt tggggctgct gggaacagtc tcgctgggaa tctttttcgt cttgatgagg
     6661 aacaagggca tagggaagat gggctttgga atggtgactc ttggggccag cgcatggctc
     6721 atgtggctct cggaaattga gccagccaga attgcatgtg tcctcattgt tgtgttccta
     6781 ttgctggtgg tgctcatacc tgagccagaa aagcaaagat ctccccagga caaccaaatg
     6841 gcaatcatca tcatggtagc agtaggtctt ctgggcttga ttaccgccaa tgaactcgga
     6901 tggttggaga gaacaaagag tgacctaagc catctaatgg gaaggagaga ggagggggca
     6961 accataggat tctcaatgga cattgacctg cggccagcct cagcttgggc catctatgct
     7021 gccttgacaa ctttcattac cccagccgtc caacatgcag tgaccacttc atacaacaac
     7081 tactccttaa tggcgatggc cacgcaagct ggagtgttgt ttggtatggg caaagggatg
     7141 ccattctacg catgggactt tggagtcccg ctgctaatga taggttgcta ctcacaatta
     7201 acacccctga ccctaatagt ggccatcatt ttgctcgtgg cgcactacat gtacttgatc
     7261 ccagggctgc aggcagcagc tgcgcgtgct gcccagaaga gaacggcagc tggcatcatg
     7321 aagaaccctg ttgtggatgg aatagtggtg actgacattg acacaatgac aattgacccc
     7381 caagtggaga aaaagatggg acaggtgcta ctcatagcag tagccgtctc cagcgccata
     7441 ctgtcgcgga ccgcctgggg gtggggggag gccggggccc tgatcacagc cgcaacttcc
     7501 actttgtggg aaggctctcc gaacaagtac tggaactcct ctacagccac ttcactgtgt
     7561 aacattttta ggggaagtta cttggctgga gcttctctaa tctacacagt aacaagaaac
     7621 gctggcttgg tcaagagacg agggggtgga acaggagaga ccctgggaga gaaatggaag
     7681 gcccgcttga accagatgtc ggccctggag ttctactcct acaaaaagtc aggcatcacc
     7741 gaggtgtgca gagaagaggc ccgccgcgcc ctcaaggacg gtgtggcaac gggaggccat
     7801 gctgtgtccc gaggaagtgc aaagctgaga tggttggtgg agcggggata cctgcagccc
     7861 tatggaaagg tcattgatct tggatgtggc agagggggct ggagttacta cgccgccacc
     7921 atccgcaaag ttcaagaagt gaaaggatac acaaaaggag gccctggtca tgaagaaccc
     7981 gtgttggtgc aaagctatgg gtggaacata gtccgtctta agagtggggt ggacgtcttt
     8041 catatggcgg ctgagccgtg tgacacgttg ctgtgtgaca taggtgagtc atcatctagt
     8101 cctgaagtgg aagaagcacg gacgctcaga gtcctctcca tggtggggga ttggcttgaa
     8161 aaaagaccag gagccttttg tataaaagtg ttgtgcccat acaccagcac tatgatggaa
     8221 accctggagc gactgcagcg taggtatggg ggaggactgg tcagagtgcc actctcccgc
     8281 aactctacac atgagatgta ctgggtctct ggagcgaaaa gcaacaccat aaaaagtgtg
     8341 tccaccacga gccagctcct cttggggcgc atggacgggc ctaggaggcc agtgaaatat
     8401 gaggaggatg tgaatctcgg ctctggcacg cgggctgtgg taagctgcgc tgaagctccc
     8461 aacatgaaga tcattggtaa ccgcattgaa aggatccgca gtgagcacgc ggaaacgtgg
     8521 ttctttgacg agaaccaccc atataggaca tgggcttacc atggaagcta tgaggccccc
     8581 acacaagggt cagcgtcctc tctaataaac ggggttgtca ggctcctgtc aaaaccctgg
     8641 gatgtggtga ctggagtcac aggaatagcc atgaccgaca ccacaccgta tggtcagcaa
     8701 agagttttca aggaaaaagt ggacactagg gtgccagacc cccaagaagg cactcgtcag
     8761 gttatgagca tggtctcttc ctggttgtgg aaagagctag gcaaacacaa acggccacga
     8821 gtctgtacca aagaagagtt catcaacaag gttcgtagca atgcagcatt aggggcaata
     8881 tttgaagagg aaaaagagtg gaagactgca gtggaagctg tgaacgatcc aaggttctgg
     8941 gctctagtgg acaaggaaag agagcaccac ctgagaggag agtgccagag ttgtgtgtac
     9001 aacatgatgg gaaaaagaga aaagaaacaa ggggaatttg gaaaggccaa gggcagccgc
     9061 gccatctggt atatgtggct aggggctaga tttctagagt tcgaagccct tggattcttg
     9121 aacgaggatc actggatggg gagagagaac tcaggaggtg gtgttgaagg gctgggatta
     9181 caaagactcg gatatgtcct agaagagatg agtcgcatac caggaggaag gatgtatgca
     9241 gatgacactg ctggctggga cacccgcatt agcaggttcg atctggagaa tgaagctcta
     9301 atcaccaacc aaatggagaa agggcacagg gccttggcat tggccataat caagtacaca
     9361 taccaaaaca aagtggtaaa ggtccttaga ccagctgaaa aagggaaaac agttatggac
     9421 attatttcga gacaagacca aagggggagc ggacaagttg tcacttacgc tcttaacaca
     9481 tttaccaacc tagtggtgca actcattcgg aatatggagg ctgaggaagt tctggagatg
     9541 caagacttgt ggctgctgcg gaggtcagag aaagtgacca actggttgca gagcaacgga
     9601 tgggataggc tcaaacgaat ggcagtcagt ggagatgact gcgttgtgaa gccaattgat
     9661 gataggtttg cacatgccct caggttcttg aatgatatgg gaaaagttag gaaggacaca
     9721 caagagtgga aaccctcaac tggatgggac aactgggaag aagttccgtt ttgctcccac
     9781 cacttcaaca agctccatct caaggacggg aggtccattg tggttccctg ccgccaccaa
     9841 gatgaactga ttggccgggc ccgcgtctct ccaggggcgg gatggagcat ccgggagact
     9901 gcttgcctag caaaatcata tgcgcaaatg tggcagctcc tttatttcca cagaagggac
     9961 ctccgactga tggccaatgc catttgttca tctgtgccag ttgactgggt tccaactggg
    10021 agaactacct ggtcaatcca tggaaaggga gaatggatga ccactgaaga catgcttgtg
    10081 gtgtggaaca gagtgtggat tgaggagaac gaccacatgg aagacaagac cccagttgcg
    10141 aaatggacag acattcccta tttgggaaaa agggaagact tgtggtgtgg atctctcata
    10201 gggcacagac cgcgcaccac ctgggctgag aacattaaaa acacagtcaa catggtgcgc
    10261 aggatcatag gtgatgaaga aaagtacatg gactacctat ccacccaagt tcgctacttg
    10321 ggtgaagaag ggtctacacc tggagtgctg taagcaccaa tcttaatgtt gtcaggcctg
    10381 ctagtcagcc a

[niman]

Sequences producing significant alignments:

Select:AllNone Selected:0

AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments

Sequences producing significant alignments:

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
Select seq gb|KY317940.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds	18969	18969	100%	0.0	100%	KY317940.1
Select seq gb|KY317938.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds	18914	18914	100%	0.0	99%	KY317938.1
Select seq gb|KY317939.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds	18894	18894	100%	0.0	99%	KY317939.1
Select seq gb|KX198135.2|	Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome	18892	18892	100%	0.0	99%	KX198135.2
Select seq gb|KY317936.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds	18886	18886	100%	0.0	99%	KY317936.1
Select seq gb|KY014303.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds	18886	18886	100%	0.0	99%	KY014303.1
Select seq gb|KX156776.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome	18881	18881	100%	0.0	99%	KX156776.2
Select seq gb|KX156774.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome	18875	18875	100%	0.0	99%	KX156774.2
Select seq gb|KX156775.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome	18870	18870	100%	0.0	99%	KX156775.2
Select seq gb|KX087102.2|	Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome	18870	18870	100%	0.0	99%	KX087102.2
Select seq gb|KU820897.5|	Zika virus isolate FLR polyprotein gene, complete cds	18870	18870	100%	0.0	99%	KU820897.5
Select seq gb|KX247646.1|	Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome	18870	18870	100%	0.0	99%	KX247646.1
Select seq gb|KU647676.1|	Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds	18864	18864	100%	0.0	99%	KU647676.1
Select seq gb|KY317937.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds	18848	18848	100%	0.0	99%	KY317937.1
Select seq gb|KU922960.1|	Zika virus isolate MEX/InDRE/Sm/2016, complete genome	18842	18842	100%	0.0	99%	KU922960.1
Select seq gb|KX893855.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome	18840	18840	100%	0.0	99%	KX893855.1
Select seq gb|KX702400.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome	18836	18836	100%	0.0	99%	KX702400.1
Select seq gb|KX548902.1|	Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds	18836	18836	100%	0.0	99%	KX548902.1
Select seq gb|KU922923.1|	Zika virus isolate MEX/InDRE/Lm/2016, complete genome	18836	18836	100%	0.0	99%	KU922923.1
Select seq gb|KX447510.1|	Zika virus isolate 1_0049_PF polyprotein gene, complete cds	18814	18814	100%	0.0	99%	KX447510.1
Select seq gb|KU991811.1|	Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KU991811.1
Select seq gb|KY075932.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL001Sa polyprotein gene, complete cds	18803	18803	100%	0.0	99%	KY075932.1
Select seq gb|KX447512.1|	Zika virus isolate 1_0181_PF polyprotein gene, complete cds	18803	18803	100%	0.0	99%	KX447512.1
Select seq gb|KX369547.1|	Zika virus strain PF13/251013-18, complete genome	18803	18803	100%	0.0	99%	KX369547.1
Select seq gb|KX280026.1|	Zika virus isolate Paraiba_01, complete genome	18803	18803	100%	0.0	99%	KX280026.1
Select seq gb|KU509998.3|	Zika virus strain Haiti/1225/2014, complete genome	18803	18803	100%	0.0	99%	KU509998.3
Select seq gb|KJ776791.2|	Zika virus strain H/PF/2013, complete genome	18798	18798	100%	0.0	99%	KJ776791.2
Select seq gb|KX447509.1|	Zika virus isolate 1_0087_PF polyprotein gene, complete cds	18798	18798	100%	0.0	99%	KX447509.1
Select seq gb|KX447513.1|	Zika virus isolate 1_0134_PF polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KX447513.1
Select seq gb|KR872956.1|	Zika virus strain 17829 polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KR872956.1
Select seq gb|KX197205.1|	Zika virus isolate 9, complete genome	18787	18787	100%	0.0	99%	KX197205.1
Select seq gb|KX447515.1|	Zika virus isolate 1_0030_PF polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KX447515.1
Select seq gb|KX447511.1|	Zika virus isolate 1_0015_PF polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KX447511.1
Select seq gb|KU707826.1|	Zika virus isolate SSABR1, complete genome	18787	18787	100%	0.0	99%	KU707826.1
Select seq gb|KU365779.1|	Zika virus strain BeH819966 polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KU365779.1
Select seq gb|KU321639.1|	Zika virus strain ZikaSPH2015, complete genome	18787	18787	100%	0.0	99%	KU321639.1
Select seq gb|KX811222.1|	Zika virus isolate Brazil_2015_MG, complete genome	18781	18781	100%	0.0	99%	KX811222.1
Select seq gb|KX447514.1|	Zika virus isolate 1_0035_PF polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KX447514.1
Select seq gb|KX262887.1|	Zika virus isolate 103451, complete genome	18781	18781	100%	0.0	99%	KX262887.1
Select seq gb|KX051563.1|	Zika virus isolate Haiti/1/2016, complete genome	18781	18781	100%	0.0	99%	KX051563.1
Select seq gb|KX447516.1|	Zika virus isolate 1_0111_PF polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KX447516.1
Select seq gb|KU729218.1|	Zika virus isolate BeH828305 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU729218.1
Select seq gb|KX694534.2|	Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome	18770	18770	100%	0.0	99%	KX694534.2
Select seq gb|KU758877.1|	Zika virus isolate 17271 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KU758877.1
Select seq gb|KX197192.1|	Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome	18770	18770	100%	0.0	99%	KX197192.1
Select seq gb|KU926309.1|	Zika virus isolate Rio-U1, complete genome	18770	18770	100%	0.0	99%	KU926309.1
Select seq gb|KU365780.1|	Zika virus strain BeH815744 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KU365780.1
Select seq gb|KY014297.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds	18768	18768	100%	0.0	99%	KY014297.1
Select seq gb|KU497555.1|	Zika virus isolate Brazil-ZKV2015, complete genome	18766	18766	99%	0.0	99%	KU497555.1
Select seq gb|KU365777.1|	Zika virus strain BeH818995 polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KU365777.1
Select seq gb|KY328289.1|	Zika virus isolate HN16, complete genome	18759	18759	100%	0.0	99%	KY328289.1
Select seq gb|KX879604.1|	Zika virus isolate SN089, complete genome	18759	18759	100%	0.0	99%	KX879604.1
Select seq gb|KU940228.1|	Zika virus isolate Bahia07, partial genome	18759	18759	100%	0.0	99%	KU940228.1
Select seq gb|KU501217.1|	Zika virus strain 8375 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU501217.1
Select seq gb|KU365778.1|	Zika virus strain BeH819015 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU365778.1
Select seq gb|KU312312.1|	Zika virus isolate Z1106033 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU312312.1
Select seq gb|KU527068.1|	Zika virus strain Natal RGN, complete genome	18753	18753	100%	0.0	99%	KU527068.1
Select seq gb|KU501216.1|	Zika virus strain 103344 polyprotein gene, complete cds	18753	18753	100%	0.0	99%	KU501216.1
Select seq gb|KY014327.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds	18750	18750	100%	0.0	99%	KY014327.1
Select seq gb|KY120348.1|	Zika virus isolate CIENI551, complete genome	18748	18748	100%	0.0	99%	KY120348.1
Select seq gb|KX879603.1|	Zika virus isolate SN062, complete genome	18748	18748	100%	0.0	99%	KX879603.1
Select seq gb|KX247632.1|	Zika virus isolate MEX_I_7 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KX247632.1
Select seq gb|KU937936.1|	Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KU937936.1
Select seq gb|KU501215.1|	Zika virus strain PRVABC59, complete genome	18748	18748	100%	0.0	99%	KU501215.1
Select seq gb|KX087101.3|	Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome	18742	18742	100%	0.0	99%	KX087101.3
Select seq gb|KY014315.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KY014315.1
Select seq gb|KX601168.1|	Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome	18742	18742	100%	0.0	99%	KX601168.1
Select seq gb|KU729217.2|	Zika virus isolate BeH823339 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KU729217.2
Select seq gb|KX446951.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome	18737	18737	100%	0.0	99%	KX446951.2
Select seq gb|KX446950.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome	18737	18737	100%	0.0	99%	KX446950.2
Select seq gb|KX856011.1|	Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome	18737	18737	100%	0.0	99%	KX856011.1
Select seq gb|KX447517.1|	Zika virus isolate 1_0038_PF polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KX447517.1
Select seq gb|KX520666.1|	Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KX520666.1
Select seq gb|KX377337.1|	Zika virus strain PRVABC-59, complete genome	18737	18737	100%	0.0	99%	KX377337.1
Select seq gb|KU820898.1|	Zika virus isolate GZ01 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KU820898.1
Select seq gb|KX269878.1|	Zika virus isolate Haiti/2016/PD, complete genome	18733	18733	100%	0.0	99%	KX269878.1
Select seq gb|KY075939.1|	Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL08M polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY075939.1
Select seq gb|KY075933.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL008U polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY075933.1
Select seq gb|KY014304.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY014304.1
Select seq gb|KU870645.1|	Zika virus isolate FB-GWUH-2016, complete genome	18731	18731	100%	0.0	99%	KU870645.1
Select seq gb|KY014296.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KY014296.1
Select seq gb|KX806557.2|	Zika virus isolate TS17-2016, complete genome	18726	18726	100%	0.0	99%	KX806557.2
Select seq gb|KU926310.1|	Zika virus isolate Rio-S1, complete genome	18726	18726	100%	0.0	99%	KU926310.1
Select seq gb|KU853013.1|	Zika virus isolate Dominican Republic/2016/PD2, complete genome	18726	18726	100%	0.0	99%	KU853013.1
Select seq gb|KU853012.1|	Zika virus isolate Dominican Republic/2016/PD1, complete genome	18724	18724	100%	0.0	99%	KU853012.1
Select seq gb|KY075934.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL016U polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KY075934.1
Select seq gb|KX056898.1|	Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KX056898.1
Select seq gb|KU955590.1|	Zika virus isolate Z16019 polyprotein gene, complete cds	18720	18720	100%	0.0	99%	KU955590.1
Select seq gb|KX766028.1|	Zika virus isolate R114916, complete genome	18716	18716	100%	0.0	99%	KX766028.1
Select seq gb|KY003153.1|	Zika virus strain ZIKV/34997/Pavia/2016 polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KY003153.1
Select seq gb|KU740184.2|	Zika virus isolate GD01 polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KU740184.2
Select seq gb|KU761564.1|	Zika virus isolate GDZ16001 polyprotein gene, complete cds	18715	18715	100%	0.0	99%	KU761564.1
Select seq gb|KY014300.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds	18709	18709	100%	0.0	99%	KY014300.1
Select seq dbj|LC190723.1|	Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016	18709	18709	100%	0.0	99%	LC190723.1
Select seq gb|KY120349.1|	Zika virus isolate CIENI551, complete genome	18705	18705	100%	0.0	99%	KY120349.1
Select seq gb|KY014321.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds	18703	18703	100%	0.0	99%	KY014321.1
Select seq gb|KX766029.1|	Zika virus isolate R116265, complete genome	18703	18703	100%	0.0	99%	KX766029.1
Select seq gb|KY014295.1|	Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KY014295.1
Select seq gb|KX842449.2|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds	18698	18698	100%	0.0	99%	KX842449.2
Select seq gb|KY003154.1|	Zika virus strain ZIKV/VR10599/Pavia/2016 polyprotein gene, complete cds	18692	18692	100%	0.0	99%	KY003154.1

[niman]

LOCUS       KY317938               10387 bp    RNA     linear   VRL 27-DEC-2016
DEFINITION  Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se
            polyprotein gene, complete cds.
ACCESSION   KY317938
VERSION     KY317938.1
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10387)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Zika virus sequenced from Colombia, 2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10387)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2016) Department of Immunology and Microbial
            Science, The Scripps Research Institute, 10550 North Torrey Pines
            Road, IMM-210, La Jolla, CA 92037, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: NovoAlign v. V3.04
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10387
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="ZIKV/Homo_sapiens/Colombia/2016/ZC199Se"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Colombia"
                     /collection_date="10-Jan-2016"
                     /collected_by="Antibody Systems Inc"
     CDS             81..10352
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="APQ41784.1"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGAETSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVAKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 cgacagttcg agtttgaagc gaaagctagc aacagtatca acaggtttta ttttggattt
       61 ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa atccggagga ttccggattg
      121 tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt tgggggcttg aagaggctgc
      181 cagccggact tctgctgggt catgggccca tcaggatggt cttggcgatt ctagcctttt
      241 tgagattcac ggcaatcaag ccatcactgg gtctcatcaa tagatggggt tcagtgggga
      301 aaaaagaggc tatggaaata ataaagaagt tcaagaaaga tctggctgcc atgctgagaa
      361 taatcaatgc taggaaggag aagaagagac gaggcgcaga aactagtgtc ggaattgttg
      421 gcctcctgct gaccacagct atggcagcgg aggtcactag acgtgggagt gcatactata
      481 tgtacttgga cagaaacgat gctggggagg ccatatcttt tccaaccaca ttggggatga
      541 ataagtgtta tatacagatc atggatcttg gacacatgtg tgatgccacc atgagctatg
      601 aatgccctat gctggatgag ggggtggaac cagatgacgt cgattgttgg tgcaacacga
      661 cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa aggtgaagca cggagatcta
      721 gaagagccgt gacgctcccc tcccattcca ctaggaagct gcaaacgcgg tcgcaaacct
      781 ggttggaatc aagagaatac acaaagcact tgattagagt cgaaaattgg atattcagga
      841 accctggttt cgctttagca gcagctgcca tcgcttggct tttgggaagc tcaacgagcc
      901 aaaaagtcat atacttggtc atgatactgc tgattgcccc ggcatacagc atcaggtgca
      961 taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg gttgatgttg
     1021 tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact gtcgacatag
     1081 agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc tatgaggcat
     1141 caatatcaga catggcttcg gacagccgct gcccaacaca aggtgaagcc taccttgaca
     1201 agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc tggggaaatg
     1261 gatgtggact ttttggcaaa gggagcctgg tgacatgcgc taagtttgca tgctccaaga
     1321 aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg ttgtcagttc
     1381 atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact gatgagaata
     1441 gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg gggggttttg
     1501 gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat ttgtattact
     1561 tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac attccattac
     1621 cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa gcactggtag
     1681 agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt tctagggagt caagaaggag
     1741 cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca aagggaaggc
     1801 tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg aagggcgtgt
     1861 catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa acactgcacg
     1921 ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag gttccagctc
     1981 agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc gctaaccccg
     2041 taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca ccatttgggg
     2101 actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg cacaggagtg
     2161 gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga atggcagtct
     2221 tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca ttgggcaagg
     2281 gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg tcctggttct
     2341 cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag aatggatcta
     2401 tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca gccgtctctg
     2461 ctgatgtggg gtgctcggtg gacttctcaa agaaggagac gagatgtggt acaggggtgt
     2521 tcgtctataa cgacgttgaa gcctggaggg acaggtacaa gtaccatcct gactcccccc
     2581 gtagattggc agcagcagtc aagcaagcct gggaagatgg tatctgcggg atctcctctg
     2641 tttcaagaat ggaaaacatc atgtggagat cagtagaagg ggagctcaac gcaatcctgg
     2701 aagagaatgg agttcaactg acggtcgttg tgggatctgt aaaaaacccc atgtggagag
     2761 gtccacagag attgcccgtg cctgtgaacg agctgcccca cggctggaag gcttggggga
     2821 aatcgtactt cgtcagagca gcaaagacaa ataacagctt tgtcgtggat ggtgacacac
     2881 tgaaggaatg cccactcaaa catagagcat ggaacagctt tcttgtggag gatcatgggt
     2941 tcggggtatt tcacactagt gtctggctca aggttagaga agattattca ttagagtgtg
     3001 atccagccgt tattggaaca gctgttaagg gaaaggaggc tgtacacagt gatctaggct
     3061 actggattga gagtgagaag aatgacacat ggaggctgaa gagggcccat ctgatcgaga
     3121 tgaaaacatg tgaatggcca aagtcccaca cattgtggac agatggaata gaagagagtg
     3181 atctgatcat acccaagtct ttagctgggc cactcagcca tcacaatacc agagagggct
     3241 ataggaccca aatgaaaggg ccatggcaca gtgaagagct tgaaattcgg tttgaggaat
     3301 gcccaggcac taaggtccac gtggaggaaa catgtggaac aagaggacca tctctgagat
     3361 caaccactgc aagcggaagg gtgatcgagg aatggtgctg cagggagtgc acaatgcccc
     3421 cactgtcgtt ctgggctaaa gatggctgtt ggtatggaat ggagataagg cccaggaaag
     3481 aaccagaaag caacttagta aggtcaatgg tgactgcagg atcaactgat cacatggatc
     3541 acttctccct tggagtgctt gtgattctgc tcatggtgca ggaagggctg aagaagagaa
     3601 tgaccacaaa gatcatcata agcacatcaa tggcagtgct ggtagctatg atcctgggag
     3661 gattttcaat gagtgacctg gctaagcttg caattttgat gggtgccacc ttcgcggaaa
     3721 tgaacactgg aggagatgta gctcatctgg cgctgatagc ggcattcaaa gtcagaccag
     3781 cgttgctggt atctttcatc ttcagagcta attggacacc ccgtgaaagc atgctgctgg
     3841 ccttggcctc gtgtcttttg caaactgcga tctccgcctt ggagggcgac ctgatggttc
     3901 tcatcaatgg ttttgctttg gcctggttgg caatacgagc gatggttgtt ccacgcactg
     3961 acaacatcac cttggcaatc ctggctgctc tgacaccact ggcccggggc acactgcttg
     4021 tggcgtggag agcaggcctt gctacttgcg gggggtttat gctcctctct ctgaagggaa
     4081 aaggcagtgt gaagaagaac ttaccatttg tcatggccct gggactaacc gctgtgaggc
     4141 tggtcgaccc catcaacgtg gtgggactgc tgttgctcac aaggagtggg aagcggagct
     4201 ggccccctag cgaagtactc acagctgttg gcctgatatg cgcattggct ggagggttcg
     4261 ccaaggcaga tatagagatg gctgggccca tggccgcggt cggtctgcta attgtcagtt
     4321 acgtggtctc aggaaagagt gtggacatgt acattgaaag agcaggtgac atcacatggg
     4381 aaaaagatgc ggaagtcact ggaaacagtc cccggctcga tgtggcgcta gatgagagtg
     4441 gtgatttctc cctggtggag gatgacggtc cccccatgag agagatcata ctcaaggtgg
     4501 tcctgatgac catctgtggc atgaacccaa tagccatacc ctttgcagct ggagcgtggt
     4561 acgtatacgt gaagactgga aaaaggagtg gtgctctatg ggatgtgcct gctcccaagg
     4621 aagtaaaaaa gggggagacc acagatggag tgtacagagt aatgactcgt agactgctag
     4681 gttcaacaca agttggagtg ggagttatgc aagagggggt ctttcacact atgtggcacg
     4741 tcacaaaagg atccgcgctg agaagcggtg aagggagact tgatccatac tggggagatg
     4801 tcaagcagga tctggtgtca tactgtggtc catggaagct agatgccgcc tgggacgggc
     4861 acagcgaggt gcagctcttg gccgtgcccc ccggagagag agcgaggaac atccagactc
     4921 tgcccggaat atttaagaca aaggatgggg acattggagc ggttgcgctg gattacccag
     4981 caggaacttc aggatctcca atcctagaca agtgtgggag agtgatagga ctttatggca
     5041 atggggtcgt gatcaaaaat gggagttatg ttagtgccat cacccaaggg aggagggagg
     5101 aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa gaagaagcag ctaactgtct
     5161 tagacttgca tcctggagct gggaaaacca ggagagttct tcctgaaata gtccgtgaag
     5221 ccataaaaac aagactccgt actgtgatct tagctccaac cagggttgtc gctgctgaaa
     5281 tggaggaagc ccttagaggg cttccagtgc gttatatgac aacagcagtc aatgtcaccc
     5341 actctggaac agaaatcgtc gacttaatgt gccatgccac cttcacttca cgtctactac
     5401 agccaatcag agtccccaac tataatctgt atattatgga tgaggcccac ttcacagatc
     5461 cctcaagtat agcagcaaga ggatacattt caacaagggt tgagatgggc gaggcggctg
     5521 ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc atttccggac tccaactcac
     5581 caattatgga caccgaagtg gaagtcccag agagagcctg gagctcaggc tttgattggg
     5641 tgacggatca ttctggaaaa acagtttggt ttgttccaag cgtgaggaac ggcaatgaga
     5701 tcgcagcttg tctgacaaag gctggaaaac gggtcataca gctcagcaga aagacttttg
     5761 agacagagtt ccagaaaaca aaacatcaag agtgggactt tgtcgtgaca actgacattt
     5821 cagagatggg cgccaacttt aaagctgacc gtgtcataga ttccaggaga tgcctaaagc
     5881 cggtcatact tgatggcgag agagtcattc tggctggacc catgcctgtc acacatgcca
     5941 gcgctgccca gaggaggggg cgcataggca ggaatcccaa taaacctgga gatgagtatc
     6001 tgtatggagg tgggtgcgca gagactgacg aagaccatgc acactggctt gaagcaagaa
     6061 tgctccttga caatatttac ctccaagatg gcctcatagc ctcgctctat cgacctgagg
     6121 ccgacaaagt agcagccatt gagggagagt tcaagcttag gacggagcaa aggaagacct
     6181 ttgtggaact catgaaaaga ggagatcttc ctgtttggct ggcctatcag gttgcatctg
     6241 ccggaataac ctacacagat agaagatggt gctttgatgg cacgaccaac aacaccataa
     6301 tggaagacag tgtgccggca gaggtgtgga ccagacacgg agagaaaaga gtgctcaaac
     6361 cgaggtggat ggacgccaga gtttgttcag atcatgcggc cctgaagtca ttcaaggagt
     6421 ttgccgctgg gaaaagagga gcggcttttg gagtgatgga agccctggga acactgccag
     6481 gacacatgac agagagattc caggaagcca ttgacaacct cgctgtgctc atgcgggcag
     6541 agactggaag caggccttac aaagccgcgg cggcccaatt gccggagacc ctagagacca
     6601 ttatgctttt ggggttgctg ggaacagtct cgctgggaat ctttttcgtc ttgatgagga
     6661 acaagggcat agggaagatg ggctttggaa tggtgactct tggggccagc gcatggctca
     6721 tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt cctcattgtt gtgttcctat
     6781 tgctggtggt gctcatacct gagccagaaa agcaaagatc tccccaggac aaccaaatgg
     6841 caatcatcat catggtagca gtaggtcttc tgggcttgat taccgccaat gaactcggat
     6901 ggttggagag aacaaagagt gacctaagcc atctaatggg aaggagagag gagggggcaa
     6961 ccataggatt ctcaatggac attgacctgc ggccagcctc agcttgggcc atctatgctg
     7021 ccttgacaac tttcattacc ccagccgtcc aacatgcagt gaccacttca tacaacaact
     7081 actccttaat ggcgatggcc acgcaagctg gagtgttgtt tggtatgggc aaagggatgc
     7141 cattctacgc atgggacttt ggagtcccgc tgctaatgat aggttgctac tcacaattaa
     7201 cacccctgac cctaatagtg gccatcattt tgctcgtggc gcactacatg tacttgatcc
     7261 cagggctgca ggcagcagct gcgcgtgctg cccagaagag aacggcagct ggcatcatga
     7321 agaaccctgt tgtggatgga atagtggtga ctgacattga cacaatgaca attgaccccc
     7381 aagtggagaa aaagatggga caggtgctac tcatagcagt agccgtctcc agcgccatac
     7441 tgtcgcggac cgcctggggg tggggggagg ctggggccct gatcacagcc gcaacttcca
     7501 ctttgtggga aggctctccg aacaagtact ggaactcctc tacagccact tcactgtgta
     7561 acatttttag gggaagttac ttggctggag cttctctaat ctacacagta acaagaaacg
     7621 ctggcttggt caagagacgt gggggtggaa caggagagac cctgggagag aaatggaagg
     7681 cccgcttgaa ccagatgtcg gccctggagt tctactccta caaaaagtca ggcatcaccg
     7741 aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg tgtggcaacg ggaggccatg
     7801 ctgtgtcccg aggaagtgca aagctgagat ggttggtgga gcggggatac ctgcagccct
     7861 atggaaaggt cattgatctt ggatgtggca gagggggctg gagttactac gccgccacca
     7921 tccgcaaagt tcaagaagtg aaaggataca caaaaggagg ccctggtcat gaagaacccg
     7981 tgttggtgca aagctatggg tggaacatag tccgtcttaa gagtggggtg gacgtctttc
     8041 atatggcggc tgagccgtgt gacacgttgc tgtgtgacat aggtgagtca tcatctagtc
     8101 ctgaagtgga agaagcacgg acgctcagag tcctctccat ggtgggggat tggcttgaaa
     8161 aaagaccagg agccttttgt ataaaagtgt tgtgcccata caccagcact atgatggaaa
     8221 ccctggagcg actgcagcgt aggtatgggg gaggactggt cagagtgcca ctctcccgca
     8281 actctacaca tgagatgtac tgggtctctg gagcgaaaag caacaccata aaaagtgtgt
     8341 ccaccacgag ccagctcctc ttggggcgca tggacgggcc taggaggcca gtgaaatatg
     8401 aggaggatgt gaatctcggc tctggcacgc gggctgtggt aagctgcgct gaagctccca
     8461 acatgaagat cattggtaac cgcattgaaa ggatccgcag tgagcacgcg gaaacgtggt
     8521 tctttgacga gaaccaccca tataggacat gggcttacca tggaagctat gaggccccca
     8581 cacaagggtc agcgtcctct ctaataaacg gggttgtcag gctcctgtca aaaccctggg
     8641 atgtggtgac tggagtcaca ggaatagcca tgaccgacac cacaccgtat ggtcagcaaa
     8701 gagttttcaa ggaaaaagtg gacactaggg tgccagaccc ccaagaaggc actcgtcagg
     8761 ttatgagcat ggtctcttcc tggttgtgga aagagctagg caaacacaaa cggccacgag
     8821 tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa tgcagcatta ggggcaatat
     8881 ttgaagagga aaaagagtgg aagactgcag tggaagctgt gaacgatcca aggttctggg
     8941 ctctagtgga caaggaaaga gagcaccacc tgagaggaga gtgccagagt tgtgtgtaca
     9001 acatgatggg aaaaagagaa aagaaacaag gggaatttgg aaaggccaag ggcagccgcg
     9061 ccatctggta tatgtggcta ggggctagat ttctagagtt cgaagccctt ggattcttga
     9121 acgaggatca ctggatgggg agagagaact caggaggtgg tgttgaaggg ctgggattac
     9181 aaagactcgg atatgtcctt gaagagatga gtcgcatacc aggaggaagg atgtatgcag
     9241 atgacactgc tggctgggac acccgcatta gcaggtttga tctggagaat gaagctctaa
     9301 tcaccaacca aatggagaaa gggcacaggg ccttggcatt ggccataatc aagtacacat
     9361 accaaaacaa agtggtaaag gtccttagac cagctgaaaa agggaaaaca gttatggaca
     9421 ttatttcgag acaagaccaa agggggagcg gacaagttgt cacttacgct cttaacacat
     9481 ttaccaacct agtggtgcaa ctcattcgga atatggaggc tgaggaagtt ctggagatgc
     9541 aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa ctggttgcag agcaacggat
     9601 gggataggct caaacgaatg gcagtcagtg gagatgattg cgttgtgaag ccaattgatg
     9661 ataggtttgc acatgccctc aggttcttga atgatatggg aaaagttagg aaggacacac
     9721 aagagtggaa accctcaact ggatgggaca actgggaaga agttccgttt tgctcccacc
     9781 acttcaacaa gctccatctc aaggacggga ggtccattgt ggttccctgc cgccaccaag
     9841 atgaactgat tggccgggcc cgcgtctctc caggggcggg atggagcatc cgggagactg
     9901 cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct ttatttccac agaagggacc
     9961 tccgactgat ggccaatgcc atttgttcat ctgtgccagt tgactgggtt ccaactggga
    10021 gaactacctg gtcaatccat ggaaagggag aatggatgac cactgaagac atgcttgtgg
    10081 tgtggaacag agtgtggatt gaggagaacg accacatgga agacaagacc ccagttgcga
    10141 aatggacaga cattccctat ttgggaaaaa gggaagactt gtggtgtgga tctctcatag
    10201 ggcacagacc gcgcaccacc tgggctgaga acattaaaaa cacagtcaac atggtgcgca
    10261 ggatcatagg tgatgaagaa aagtacatgg actacctatc cacccaagtt cgctacttgg
    10321 gtgaagaagg gtctacacct ggagtgctgt aagcaccaat cttaatgttg tcaggcctgc
    10381 tagtcag

[niman]

Sequences producing significant alignments:

Select:AllNone Selected:0

AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments

Sequences producing significant alignments:

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
Select seq gb|KY317938.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds	18969	18969	100%	0.0	100%	KY317938.1
Select seq gb|KX198135.2|	Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome	18925	18925	100%	0.0	99%	KX198135.2
Select seq gb|KY317939.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds	18921	18921	100%	0.0	99%	KY317939.1
Select seq gb|KY014303.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds	18920	18920	100%	0.0	99%	KY014303.1
Select seq gb|KY317940.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds	18914	18914	100%	0.0	99%	KY317940.1
Select seq gb|KX156776.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome	18914	18914	100%	0.0	99%	KX156776.2
Select seq gb|KY317936.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds	18908	18908	100%	0.0	99%	KY317936.1
Select seq gb|KX156774.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome	18908	18908	100%	0.0	99%	KX156774.2
Select seq gb|KX156775.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome	18903	18903	100%	0.0	99%	KX156775.2
Select seq gb|KX087102.2|	Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome	18903	18903	100%	0.0	99%	KX087102.2
Select seq gb|KU820897.5|	Zika virus isolate FLR polyprotein gene, complete cds	18903	18903	100%	0.0	99%	KU820897.5
Select seq gb|KX247646.1|	Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome	18903	18903	100%	0.0	99%	KX247646.1
Select seq gb|KU647676.1|	Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds	18897	18897	100%	0.0	99%	KU647676.1
Select seq gb|KY317937.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds	18881	18881	100%	0.0	99%	KY317937.1
Select seq gb|KU922960.1|	Zika virus isolate MEX/InDRE/Sm/2016, complete genome	18875	18875	100%	0.0	99%	KU922960.1
Select seq gb|KX893855.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome	18873	18873	100%	0.0	99%	KX893855.1
Select seq gb|KX702400.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome	18870	18870	100%	0.0	99%	KX702400.1
Select seq gb|KX548902.1|	Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds	18870	18870	100%	0.0	99%	KX548902.1
Select seq gb|KU922923.1|	Zika virus isolate MEX/InDRE/Lm/2016, complete genome	18870	18870	100%	0.0	99%	KU922923.1
Select seq gb|KX447510.1|	Zika virus isolate 1_0049_PF polyprotein gene, complete cds	18848	18848	100%	0.0	99%	KX447510.1
Select seq gb|KU991811.1|	Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds	18842	18842	100%	0.0	99%	KU991811.1
Select seq gb|KY075932.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL001Sa polyprotein gene, complete cds	18836	18836	100%	0.0	99%	KY075932.1
Select seq gb|KX447512.1|	Zika virus isolate 1_0181_PF polyprotein gene, complete cds	18836	18836	100%	0.0	99%	KX447512.1
Select seq gb|KX369547.1|	Zika virus strain PF13/251013-18, complete genome	18836	18836	100%	0.0	99%	KX369547.1
Select seq gb|KU509998.3|	Zika virus strain Haiti/1225/2014, complete genome	18836	18836	100%	0.0	99%	KU509998.3
Select seq gb|KJ776791.2|	Zika virus strain H/PF/2013, complete genome	18831	18831	100%	0.0	99%	KJ776791.2
Select seq gb|KX447509.1|	Zika virus isolate 1_0087_PF polyprotein gene, complete cds	18831	18831	100%	0.0	99%	KX447509.1
Select seq gb|KX280026.1|	Zika virus isolate Paraiba_01, complete genome	18831	18831	100%	0.0	99%	KX280026.1
Select seq gb|KX447513.1|	Zika virus isolate 1_0134_PF polyprotein gene, complete cds	18825	18825	100%	0.0	99%	KX447513.1
Select seq gb|KR872956.1|	Zika virus strain 17829 polyprotein gene, complete cds	18820	18820	100%	0.0	99%	KR872956.1
Select seq gb|KX197205.1|	Zika virus isolate 9, complete genome	18820	18820	100%	0.0	99%	KX197205.1
Select seq gb|KX447515.1|	Zika virus isolate 1_0030_PF polyprotein gene, complete cds	18820	18820	100%	0.0	99%	KX447515.1
Select seq gb|KX447511.1|	Zika virus isolate 1_0015_PF polyprotein gene, complete cds	18820	18820	100%	0.0	99%	KX447511.1
Select seq gb|KU321639.1|	Zika virus strain ZikaSPH2015, complete genome	18820	18820	100%	0.0	99%	KU321639.1
Select seq gb|KX447514.1|	Zika virus isolate 1_0035_PF polyprotein gene, complete cds	18814	18814	100%	0.0	99%	KX447514.1
Select seq gb|KX051563.1|	Zika virus isolate Haiti/1/2016, complete genome	18814	18814	100%	0.0	99%	KX051563.1
Select seq gb|KX811222.1|	Zika virus isolate Brazil_2015_MG, complete genome	18809	18809	100%	0.0	99%	KX811222.1
Select seq gb|KX447516.1|	Zika virus isolate 1_0111_PF polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KX447516.1
Select seq gb|KU729218.1|	Zika virus isolate BeH828305 polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KU729218.1
Select seq gb|KU707826.1|	Zika virus isolate SSABR1, complete genome	18809	18809	100%	0.0	99%	KU707826.1
Select seq gb|KU365779.1|	Zika virus strain BeH819966 polyprotein gene, complete cds	18809	18809	100%	0.0	99%	KU365779.1
Select seq gb|KX262887.1|	Zika virus isolate 103451, complete genome	18803	18803	100%	0.0	99%	KX262887.1
Select seq gb|KX197192.1|	Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome	18803	18803	100%	0.0	99%	KX197192.1
Select seq gb|KU497555.1|	Zika virus isolate Brazil-ZKV2015, complete genome	18800	18800	99%	0.0	99%	KU497555.1
Select seq gb|KX694534.2|	Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome	18792	18792	100%	0.0	99%	KX694534.2
Select seq gb|KX879604.1|	Zika virus isolate SN089, complete genome	18792	18792	100%	0.0	99%	KX879604.1
Select seq gb|KU758877.1|	Zika virus isolate 17271 polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KU758877.1
Select seq gb|KU940228.1|	Zika virus isolate Bahia07, partial genome	18792	18792	100%	0.0	99%	KU940228.1
Select seq gb|KU926309.1|	Zika virus isolate Rio-U1, complete genome	18792	18792	100%	0.0	99%	KU926309.1
Select seq gb|KU365780.1|	Zika virus strain BeH815744 polyprotein gene, complete cds	18792	18792	100%	0.0	99%	KU365780.1
Select seq gb|KY014297.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds	18790	18790	100%	0.0	99%	KY014297.1
Select seq gb|KU365777.1|	Zika virus strain BeH818995 polyprotein gene, complete cds	18787	18787	100%	0.0	99%	KU365777.1
Select seq gb|KY328289.1|	Zika virus isolate HN16, complete genome	18781	18781	100%	0.0	99%	KY328289.1
Select seq gb|KX879603.1|	Zika virus isolate SN062, complete genome	18781	18781	100%	0.0	99%	KX879603.1
Select seq gb|KU501217.1|	Zika virus strain 8375 polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KU501217.1
Select seq gb|KU365778.1|	Zika virus strain BeH819015 polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KU365778.1
Select seq gb|KU312312.1|	Zika virus isolate Z1106033 polyprotein gene, complete cds	18781	18781	100%	0.0	99%	KU312312.1
Select seq gb|KU729217.2|	Zika virus isolate BeH823339 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU729217.2
Select seq gb|KU527068.1|	Zika virus strain Natal RGN, complete genome	18776	18776	100%	0.0	99%	KU527068.1
Select seq gb|KU501216.1|	Zika virus strain 103344 polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KU501216.1
Select seq gb|KY014327.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds	18772	18772	100%	0.0	99%	KY014327.1
Select seq gb|KY120348.1|	Zika virus isolate CIENI551, complete genome	18770	18770	100%	0.0	99%	KY120348.1
Select seq gb|KX447517.1|	Zika virus isolate 1_0038_PF polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KX447517.1
Select seq gb|KX520666.1|	Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KX520666.1
Select seq gb|KX247632.1|	Zika virus isolate MEX_I_7 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KX247632.1
Select seq gb|KU937936.1|	Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds	18770	18770	100%	0.0	99%	KU937936.1
Select seq gb|KU501215.1|	Zika virus strain PRVABC59, complete genome	18770	18770	100%	0.0	99%	KU501215.1
Select seq gb|KX269878.1|	Zika virus isolate Haiti/2016/PD, complete genome	18766	18766	100%	0.0	99%	KX269878.1
Select seq gb|KX087101.3|	Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome	18764	18764	100%	0.0	99%	KX087101.3
Select seq gb|KY014315.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KY014315.1
Select seq gb|KY014304.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds	18764	18764	100%	0.0	99%	KY014304.1
Select seq gb|KX601168.1|	Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome	18764	18764	100%	0.0	99%	KX601168.1
Select seq gb|KX446951.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome	18759	18759	100%	0.0	99%	KX446951.2
Select seq gb|KY014296.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KY014296.1
Select seq gb|KX806557.2|	Zika virus isolate TS17-2016, complete genome	18759	18759	100%	0.0	99%	KX806557.2
Select seq gb|KX856011.1|	Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome	18759	18759	100%	0.0	99%	KX856011.1
Select seq gb|KX377337.1|	Zika virus strain PRVABC-59, complete genome	18759	18759	100%	0.0	99%	KX377337.1
Select seq gb|KU926310.1|	Zika virus isolate Rio-S1, complete genome	18759	18759	100%	0.0	99%	KU926310.1
Select seq gb|KU820898.1|	Zika virus isolate GZ01 polyprotein gene, complete cds	18759	18759	100%	0.0	99%	KU820898.1
Select seq gb|KX446950.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome	18753	18753	100%	0.0	99%	KX446950.2
Select seq gb|KU870645.1|	Zika virus isolate FB-GWUH-2016, complete genome	18753	18753	100%	0.0	99%	KU870645.1
Select seq gb|KY075939.1|	Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL08M polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KY075939.1
Select seq gb|KY075933.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL008U polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KY075933.1
Select seq gb|KY003153.1|	Zika virus strain ZIKV/34997/Pavia/2016 polyprotein gene, complete cds	18748	18748	100%	0.0	99%	KY003153.1
Select seq gb|KU853013.1|	Zika virus isolate Dominican Republic/2016/PD2, complete genome	18748	18748	100%	0.0	99%	KU853013.1
Select seq gb|KU853012.1|	Zika virus isolate Dominican Republic/2016/PD1, complete genome	18746	18746	100%	0.0	99%	KU853012.1
Select seq gb|KY075934.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL016U polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KY075934.1
Select seq gb|KY014300.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KY014300.1
Select seq dbj|LC190723.1|	Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016	18742	18742	100%	0.0	99%	LC190723.1
Select seq gb|KX056898.1|	Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KX056898.1
Select seq gb|KU955590.1|	Zika virus isolate Z16019 polyprotein gene, complete cds	18742	18742	100%	0.0	99%	KU955590.1
Select seq gb|KX766028.1|	Zika virus isolate R114916, complete genome	18739	18739	100%	0.0	99%	KX766028.1
Select seq gb|KY014321.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KY014321.1
Select seq gb|KU740184.2|	Zika virus isolate GD01 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KU740184.2
Select seq gb|KU761564.1|	Zika virus isolate GDZ16001 polyprotein gene, complete cds	18737	18737	100%	0.0	99%	KU761564.1
Select seq gb|KY014295.1|	Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KY014295.1
Select seq gb|KX922707.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL039U polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KX922707.1
Select seq gb|KX842449.2|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds	18731	18731	100%	0.0	99%	KX842449.2
Select seq gb|KY120349.1|	Zika virus isolate CIENI551, complete genome	18727	18727	100%	0.0	99%	KY120349.1
Select seq gb|KY003154.1|	Zika virus strain ZIKV/VR10599/Pavia/2016 polyprotein gene, complete cds	18726	18726	100%	0.0	99%	KY003154.1

[niman]

LOCUS       KY317939               10608 bp    RNA     linear   VRL 27-DEC-2016
DEFINITION  Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se
            polyprotein gene, complete cds.
ACCESSION   KY317939
VERSION     KY317939.1
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10608)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Zika virus sequenced from Colombia, 2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10608)
  AUTHORS   Grubaugh,N., Rogers,T., Beutler,N., Fredeking,T., Gangavarupu,K.,
            Oliveira,G., Robles-Sikisaka,R., Burton,D. and Andersen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2016) Department of Immunology and Microbial
            Science, The Scripps Research Institute, 10550 North Torrey Pines
            Road, IMM-210, La Jolla, CA 92037, USA
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: NovoAlign v. V3.04
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10608
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="ZIKV/Homo_sapiens/Colombia/2016/ZC204Se"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /db_xref="taxon:64320"
                     /country="Colombia"
                     /collection_date="06-Jan-2016"
                     /collected_by="Antibody Systems Inc"
     CDS             80..10351
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="APQ41785.1"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGAETSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRKDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVAKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 gacagttcga gtttgaagcg aaagctagca acagtatcaa caggttttat tttggatttg
       61 gaaacgagag tttctggtca tgaaaaaccc aaaaaagaaa tccggaggat tccggattgt
      121 caatatgcta aaacgcggag tagcccgtgt gagccccttt gggggcttga agaggctgcc
      181 agccggactt ctgctgggtc atgggcccat caggatggtc ttggcgattc tagccttttt
      241 gagattcacg gcaatcaagc catcactggg tctcatcaat agatggggtt cagtggggaa
      301 aaaagaggct atggaaataa taaagaagtt caagaaagat ctggctgcca tgctgagaat
      361 aatcaatgct aggaaggaga agaagagacg aggcgcagaa actagtgtcg gaattgttgg
      421 cctcctgctg accacagcta tggcagcgga ggtcactaga cgtgggagtg catactatat
      481 gtacttggac agaaaagatg ctggggaggc catatctttt ccaaccacat tggggatgaa
      541 taagtgttat atacagatca tggatcttgg acacatgtgt gatgccacca tgagctatga
      601 atgccctatg ctggatgagg gggtggaacc agatgacgtc gattgttggt gcaacacgac
      661 gtcaacttgg gttgtgtacg gaacctgcca tcacaaaaaa ggtgaagcac ggagatctag
      721 aagagccgtg acgctcccct cccattccac taggaagctg caaacgcggt cgcaaacctg
      781 gttggaatca agagaataca caaagcactt gattagagtc gaaaattgga tattcaggaa
      841 ccctggtttc gctttagcag cagctgccat cgcttggctt ttgggaagct caacgagcca
      901 aaaagtcata tacttggtca tgatactgct gattgccccg gcatacagca tcaggtgcat
      961 aggagtcagc aatagggact ttgtggaagg tatgtcaggt gggacttggg ttgatgttgt
     1021 cttggaacat ggaggttgtg tcaccgtaat ggcacaggac aaaccgactg tcgacataga
     1081 gctggttaca acaacagtca gcaacatggc ggaggtaaga tcctactgct atgaggcatc
     1141 aatatcagac atggcttcgg acagccgctg cccaacacaa ggtgaagcct accttgacaa
     1201 gcaatcagac actcaatatg tttgcaaaag aacgttagtg gacagaggct ggggaaatgg
     1261 atgtggactt tttggcaaag ggagcctggt gacatgcgct aagtttgcat gctccaagaa
     1321 aatgaccggg aagagcatcc agccagagaa tctggagtac cggataatgt tgtcagttca
     1381 tggctcccag cacagtggga tgatcgttaa tgacacagga catgaaactg atgagaatag
     1441 agcgaaggtt gagataacgc ccaattcacc aagagccgaa gccaccctgg ggggttttgg
     1501 aagcctagga cttgattgtg aaccgaggac aggccttgac ttttcagatt tgtattactt
     1561 gactatgaat aacaagcact ggttggttca caaggagtgg ttccacgaca ttccattacc
     1621 ttggcacgct ggggcagaca ccggaactcc acactggaac aacaaagaag cactggtaga
     1681 gttcaaggac gcacatgcca aaaggcaaac tgtcgtggtt ctagggagtc aagaaggagc
     1741 agttcacacg gcccttgctg gagctctgga ggctgagatg gatggtgcaa agggaaggct
     1801 gtcctctggc cacttgaaat gtcgcctgaa aatggataaa cttagattga agggcgtgtc
     1861 atactccttg tgtaccgcag cgttcacatt caccaagatc ccggctgaaa cactgcacgg
     1921 gacagtcaca gtggaggtac agtacgcagg gacagatgga ccttgcaagg ttccagctca
     1981 gatggcggtg gacatgcaaa ctctgacccc agttgggagg ttgataaccg ctaaccccgt
     2041 aatcactgaa agcactgaga actctaagat gatgctggaa cttgatccac catttgggga
     2101 ctcttacatt gtcataggag tcggggagaa gaagatcacc caccactggc ataggagtgg
     2161 cagcaccatt ggaaaagcat ttgaagccac tgtgagaggt gccaagagaa tggcagtctt
     2221 gggagacaca gcctgggact ttggatcagt tggaggcgct ctcaactcat tgggcaaggg
     2281 catccatcaa atttttggag cagctttcaa atcattgttt ggaggaatgt cctggttctc
     2341 acaaattctc attggaacgt tgctgatgtg gttgggtctg aacacaaaga atggatctat
     2401 ttcccttatg tgcttggcct tagggggagt gttgatcttc ttatccacag ccgtctctgc
     2461 tgatgtgggg tgctcggtgg acttctcaaa gaaggagacg agatgtggta caggggtgtt
     2521 cgtctataac gacgttgaag cctggaggga caggtacaag taccatcctg actccccccg
     2581 tagattggca gcagcagtca agcaagcctg ggaagatggt atctgcggga tctcctctgt
     2641 ttcaagaatg gaaaacatca tgtggagatc agtagaaggg gagctcaacg caatcctgga
     2701 agagaatgga gttcaactga cggtcgttgt gggatctgta aaaaacccca tgtggagagg
     2761 tccacagaga ttgcccgtgc ctgtgaacga gctgccccac ggctggaagg cttgggggaa
     2821 atcgtacttc gtcagagcag caaagacaaa taacagcttt gtcgtggatg gtgacacact
     2881 gaaggaatgc ccactcaaac atagagcatg gaacagcttt cttgtggagg atcatgggtt
     2941 cggggtattt cacactagtg tctggctcaa ggttagagaa gattattcat tagagtgtga
     3001 tccagccgtt attggaacag ctgttaaggg aaaggaggct gtacacagtg atctaggcta
     3061 ctggattgag agtgagaaga atgacacatg gaggctgaag agggcccatc tgatcgagat
     3121 gaaaacatgt gaatggccaa agtcccacac attgtggaca gatggaatag aagagagtga
     3181 tctgatcata cccaagtctt tagctgggcc actcagccat cacaatacca gagagggcta
     3241 caggacccaa atgaaagggc catggcacag tgaagagctt gaaattcggt ttgaggaatg
     3301 cccaggcact aaggtccacg tggaggaaac atgtggaaca agaggaccat ctctgagatc
     3361 aaccactgca agcggaaggg tgatcgagga atggtgctgc agggagtgca caatgccccc
     3421 actgtcgttc tgggctaaag atggctgttg gtatggaatg gagataaggc ccaggaaaga
     3481 accagaaagc aacttagtaa ggtcaatggt gactgcagga tcaactgatc acatggatca
     3541 cttctccctt ggagtgcttg tgattctgct catggtgcag gaagggctga agaagagaat
     3601 gaccacaaag atcatcataa gcacatcaat ggcagtgctg gtagctatga tcctgggagg
     3661 attttcaatg agtgacctgg ctaagcttgc aattttgatg ggtgccacct tcgcggaaat
     3721 gaacactgga ggagatgtag ctcatctggc gctgatagcg gcattcaaag tcagaccagc
     3781 gttgctggta tctttcatct tcagagctaa ttggacaccc cgtgaaagca tgctgctggc
     3841 cttggcctcg tgtcttttgc aaactgcgat ctccgccttg gagggcgacc tgatggttct
     3901 catcaatggt tttgctttgg cctggttggc aatacgagcg atggttgttc cacgcactga
     3961 caacatcacc ttggcaatcc tggctgctct gacaccactg gcccggggca cactgcttgt
     4021 ggcgtggaga gcaggccttg ctacttgcgg ggggtttatg ctcctctctc tgaagggaaa
     4081 aggcagtgtg aagaagaact taccatttgt catggccctg ggactaaccg ctgtgaggct
     4141 ggtcgacccc atcaacgtgg tgggactgct gttgctcaca aggagtggga agcggagctg
     4201 gccccctagc gaagtactca cagctgttgg cctgatatgc gcattggctg gagggttcgc
     4261 caaggcagat atagagatgg ctgggcccat ggccgcggtc ggtctgctaa ttgtcagtta
     4321 cgtggtctca ggaaagagtg tggacatgta cattgaaaga gcaggtgaca tcacatggga
     4381 aaaagatgcg gaagtcactg gaaacagtcc ccggctcgat gtggcgctag atgagagtgg
     4441 tgatttctcc ctggtggagg atgacggtcc ccccatgaga gagatcatac tcaaggtggt
     4501 cctgatgacc atctgtggca tgaacccaat agccataccc tttgcagctg gagcgtggta
     4561 cgtatacgtg aagactggaa aaaggagtgg tgctctatgg gatgtgcctg ctcccaagga
     4621 agtaaaaaag ggggagacca cagatggagt gtacagagta atgactcgta gactgctagg
     4681 ttcaacacaa gttggagtgg gagttatgca agagggggtc tttcacacta tgtggcacgt
     4741 cacaaaagga tccgcgctga gaagcggtga agggagactt gatccatact ggggagatgt
     4801 caagcaggat ctggtgtcat actgtggtcc atggaagcta gatgccgcct gggacgggca
     4861 cagcgaggtg cagctcttgg ccgtgccccc cggagagaga gcgaggaaca tccagactct
     4921 gcccggaata tttaagacaa aggatgggga cattggagcg gttgcgctgg attacccagc
     4981 aggaacttca ggatctccaa tcctagacaa gtgtgggaga gtgataggac tttatggcaa
     5041 tggggtcgtg atcaaaaatg ggagttatgt tagtgccatc acccaaggga ggagggagga
     5101 agagactcct gttgagtgct tcgagccttc gatgctgaag aagaagcagc taactgtctt
     5161 agacttgcat cctggagctg ggaaaaccag gagagttctt cctgaaatag tccgtgaagc
     5221 cataaaaaca agactccgta ctgtgatctt agctccaacc agggttgtcg ctgctgaaat
     5281 ggaggaagcc cttagagggc ttccagtgcg ttatatgaca acagcagtca atgtcaccca
     5341 ctctggaaca gaaatcgtcg acttaatgtg ccatgccacc ttcacttcac gtctactaca
     5401 gccaatcaga gtccccaact ataatctgta tattatggat gaggcccact tcacagatcc
     5461 ctcaagtata gcagcaagag gatacatttc aacaagggtt gagatgggcg aggcggctgc
     5521 catcttcatg accgccacgc caccaggaac ccgtgacgca tttccggact ccaactcacc
     5581 aattatggac accgaagtgg aagtcccaga gagagcctgg agctcaggct ttgattgggt
     5641 gacggatcat tctggaaaaa cagtttggtt tgttccaagc gtgaggaacg gcaatgagat
     5701 cgcagcttgt ctgacaaagg ctggaaaacg ggtcatacag ctcagcagaa agacttttga
     5761 gacagagttc cagaaaacaa aacatcaaga gtgggacttt gtcgtgacaa ctgacatttc
     5821 agagatgggc gccaacttta aagctgaccg tgtcatagat tccaggagat gcctaaagcc
     5881 ggtcatactt gatggcgaga gagtcattct ggctggaccc atgcctgtca cacatgccag
     5941 cgctgcccag aggagggggc gcataggcag gaatcccaat aaacctggag atgagtatct
     6001 gtatggaggt gggtgcgcag agactgacga agaccatgca cactggcttg aagcaagaat
     6061 gctccttgac aatatttacc tccaagatgg cctcatagcc tcgctctatc gacctgaggc
     6121 cgacaaagta gcagccattg agggagagtt caagcttagg acggagcaaa ggaagacctt
     6181 tgtggaactc atgaaaagag gagatcttcc tgtttggctg gcctatcagg ttgcatctgc
     6241 cggaataacc tacacagata gaagatggtg ctttgatggc acgaccaaca acaccataat
     6301 ggaagacagt gtgccggcag aggtgtggac cagacacgga gagaaaagag tgctcaaacc
     6361 gaggtggatg gacgccagag tttgttcaga tcatgcggcc ctgaagtcat tcaaggagtt
     6421 tgccgctggg aaaagaggag cggcttttgg agtgatggaa gccctgggaa cactgccagg
     6481 acacatgaca gagagattcc aggaagccat tgacaacctc gctgtgctca tgcgggcaga
     6541 gactggaagc aggccttaca aagccgcggc ggcccaattg ccggagaccc tagagaccat
     6601 tatgcttttg gggttgctgg gaacagtctc gctgggaatc tttttcgtct tgatgaggaa
     6661 caagggcata gggaagatgg gctttggaat ggtgactctt ggggccagcg catggctcat
     6721 gtggctctcg gaaattgagc cagccagaat tgcatgtgtc ctcattgttg tgttcctatt
     6781 gctggtggtg ctcatacctg agccagaaaa gcaaagatct ccccaggaca accaaatggc
     6841 aatcatcatc atggtagcag taggtcttct gggcttgatt accgccaatg aactcggatg
     6901 gttggagaga acaaagagtg acctaagcca tctaatggga aggagagagg agggggcaac
     6961 cataggattc tcaatggaca ttgacctgcg gccagcctca gcttgggcca tctatgctgc
     7021 cttgacaact ttcattaccc cagccgtcca acatgcagtg accacttcat acaacaacta
     7081 ctccttaatg gcgatggcca cgcaagctgg agtgttgttt ggtatgggca aagggatgcc
     7141 attctacgca tgggactttg gagtcccgct gctaatgata ggttgctact cacaattaac
     7201 acccctgacc ctaatagtgg ccatcatttt gctcgtggcg cactacatgt acttgatccc
     7261 agggctgcag gcagcagctg cgcgtgctgc ccagaagaga acggcagctg gcatcatgaa
     7321 gaaccctgtt gtggatggaa tagtggtgac tgacattgac acaatgacaa ttgaccccca
     7381 agtggagaaa aagatgggac aggtgctact catagcagta gccgtctcca gcgccatact
     7441 gtcgcggacc gcctgggggt ggggggaggc tggggccctg atcacagccg caacttccac
     7501 tttgtgggaa ggctctccga acaagtactg gaactcctct acagccactt cactgtgtaa
     7561 catttttagg ggaagttact tggctggagc ttctctaatc tacacagtaa caagaaacgc
     7621 tggcttggtc aagagacgtg ggggtggaac aggagagacc ctgggagaga aatggaaggc
     7681 ccgcttgaac cagatgtcgg ccctggagtt ctactcctac aaaaagtcag gcatcaccga
     7741 ggtgtgcaga gaagaggccc gccgcgccct caaggacggt gtggcaacgg gaggccatgc
     7801 tgtgtcccga ggaagtgcaa agctgagatg gctggtggag cggggatacc tgcagcccta
     7861 tggaaaggtc attgatcttg gatgtggcag agggggctgg agttactacg ccgccaccat
     7921 ccgcaaagtt caagaagtga aaggatacac aaaaggaggc cctggtcatg aagaacccgt
     7981 gttggtgcaa agctatgggt ggaacatagt ccgtcttaag agtggggtgg acgtctttca
     8041 tatggcggct gagccgtgtg acacgttgct gtgtgacata ggtgagtcat catctagtcc
     8101 tgaagtggaa gaagcacgga cgctcagagt cctctccatg gtgggggatt ggcttgaaaa
     8161 aagaccagga gccttttgta taaaagtgtt gtgcccatac accagcacta tgatggaaac
     8221 cctggagcga ctgcagcgta ggtatggggg aggactggtc agagtgccac tctcccgcaa
     8281 ctctacacat gagatgtact gggtctctgg agcgaaaagc aacaccataa aaagtgtgtc
     8341 caccacgagc cagctcctct tggggcgcat ggacgggcct aggaggccag tgaaatatga
     8401 ggaggatgtg aatctcggct ctggcacgcg ggctgtggta agctgcgctg aagctcccaa
     8461 catgaagatc attggtaacc gcattgaaag gatccgcagt gagcacgcgg aaacgtggtt
     8521 ctttgacgag aaccacccat ataggacatg ggcttaccat ggaagctatg aggcccccac
     8581 acaagggtca gcgtcctctc taataaacgg ggttgtcagg ctcctgtcaa aaccctggga
     8641 tgtggtgact ggagtcacag gaatagccat gaccgacacc acaccgtatg gtcagcaaag
     8701 agttttcaag gaaaaagtgg acactagggt gccagacccc caagaaggca ctcgtcaggt
     8761 tatgagcatg gtctcttcct ggttgtggaa agagctaggc aaacacaaac ggccacgagt
     8821 ctgtaccaaa gaagagttca tcaacaaggt tcgtagcaat gcagcattag gggcaatatt
     8881 tgaagaggaa aaagagtgga agactgcagt ggaagctgtg aacgatccaa ggttctgggc
     8941 tctagtggac aaggaaagag agcaccacct gagaggagag tgccagagtt gtgtgtacaa
     9001 catgatggga aaaagagaaa agaaacaagg ggaatttgga aaggccaagg gcagccgcgc
     9061 catctggtat atgtggctag gggctagatt tctagagttc gaagcccttg gattcttgaa
     9121 cgaggatcac tggatgggga gagagaactc aggaggtggt gttgaagggc tgggattaca
     9181 aagactcgga tatgtcctag aagagatgag tcgcatacca ggaggaagga tgtatgcaga
     9241 tgacactgct ggctgggaca cccgcattag caggtttgat ctggagaatg aagctctaat
     9301 caccaaccaa atggagaaag ggcacagggc cttggcattg gccataatca agtacacata
     9361 ccaaaacaaa gtggtaaagg tccttagacc agctgaaaaa gggaaaacag ttatggacat
     9421 tatttcgaga caagaccaaa gggggagcgg acaagttgtc acttacgctc ttaacacatt
     9481 taccaaccta gtggtgcaac tcattcggaa tatggaggct gaggaagttc tagagatgca
     9541 agacttgtgg ctgctgcgga ggtcagagaa agtgaccaac tggttgcaga gcaacggatg
     9601 ggataggctc aaacgaatgg cagtcagtgg agatgaytgc gttgtgaagc caattgatga
     9661 taggtttgca catgccctca ggttcttgaa tgatatggga aaagttagga aggacacaca
     9721 agagtggaaa ccctcaactg gatgggacaa ctgggaagaa gttccgtttt gctcccacca
     9781 cttcaacaag ctccatctca aggacgggag gtccattgtg gttccctgcc gccaccaaga
     9841 tgaactgatt ggccgggccc gcgtctctcc aggggcggga tggagcatcc gggagactgc
     9901 ttgcctagca aaatcatatg cgcaaatgtg gcagctcctt tatttccaca gaagggacct
     9961 ccgactgatg gccaatgcca tttgttcatc tgtgccagtt gactgggttc caactgggag
    10021 aactacctgg tcaatccatg gaaagggaga atggatgacc actgaagaca tgcttgtggt
    10081 gtggaacaga gtgtggattg aggagaacga ccacatggaa gacaagaccc cagttgcgaa
    10141 atggacagac attccctatt tgggaaaaag ggaagacttg tggtgtggat ctctcatagg
    10201 gcacagaccg cgcaccacct gggctgagaa cattaaaaac acagtcaaca tggtgcgcag
    10261 gatcataggt gatgaagaaa agtacatgga ctacctatcc acccaagttc gctacttggg
    10321 cgaagaaggg tctacacctg gagtgctgta agcaccaatc ttaatgttgt caggcctgct
    10381 agtcagccac agcttgggga aagctgtgca gcctgtgacc cccccaggag aagctgggaa
    10441 accaagccta tagtcaggcc gagaacgcca tggcacggaa gaagccatgc tgcctgtgag
    10501 cccctcagag gacactgagt caaaaaaccc cacgcgcttg gaggcgcagg atgggaaaag
    10561 aaggtggcga ccttccccac ccttcaatct ggggcctgaa ctggagat

[niman]

Sequences producing significant alignments:

Select:AllNone Selected:0

AlignmentsDownloadGenBankGraphicsDistance tree of resultsShow/hide columns of the table presenting sequences producing significant alignments

Sequences producing significant alignments:

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
Select seq gb|KY317939.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC204Se polyprotein gene, complete cds	18966	18966	100%	0.0	100%	KY317939.1
Select seq gb|KY317936.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC188Se polyprotein gene, complete cds	18938	18938	100%	0.0	99%	KY317936.1
Select seq gb|KY317938.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC199Se polyprotein gene, complete cds	18921	18921	100%	0.0	99%	KY317938.1
Select seq gb|KX198135.2|	Zika virus strain ZIKV/Homo sapiens/PAN/BEI-259634_V4/2016, complete genome	18910	18910	100%	0.0	99%	KX198135.2
Select seq gb|KY014303.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0127-SER polyprotein gene, complete cds	18905	18905	100%	0.0	99%	KY014303.1
Select seq gb|KX156776.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259364_V1-V2/2015, complete genome	18899	18899	100%	0.0	99%	KX156776.2
Select seq gb|KY317940.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC207Se polyprotein gene, complete cds	18894	18894	100%	0.0	99%	KY317940.1
Select seq gb|KX156774.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259359_V1-V3/2015, complete genome	18894	18894	100%	0.0	99%	KX156774.2
Select seq gb|KX156775.2|	Zika virus strain ZIKV/Homo sapiens/PAN/CDC-259249_V1-V3/2015, complete genome	18888	18888	100%	0.0	99%	KX156775.2
Select seq gb|KX087102.2|	Zika virus strain ZIKV/Homo sapiens/COL/FLR/2015, complete genome	18888	18888	100%	0.0	99%	KX087102.2
Select seq gb|KU820897.5|	Zika virus isolate FLR polyprotein gene, complete cds	18888	18888	100%	0.0	99%	KU820897.5
Select seq gb|KX247646.1|	Zika virus isolate Zika virus/Homo sapiens/COL/UF-1/2016, complete genome	18888	18888	100%	0.0	99%	KX247646.1
Select seq gb|KU647676.1|	Zika virus strain MRS_OPY_Martinique_PaRi_2015 polyprotein gene, complete cds	18883	18883	100%	0.0	99%	KU647676.1
Select seq gb|KY317937.1|	Zika virus isolate ZIKV/Homo_sapiens/Colombia/2016/ZC192Se polyprotein gene, complete cds	18866	18866	100%	0.0	99%	KY317937.1
Select seq gb|KX702400.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-1/2016, complete genome	18866	18866	100%	0.0	99%	KX702400.1
Select seq gb|KX893855.1|	Zika virus strain Zika virus/Homo sapiens/VEN/UF-2/2016, complete genome	18864	18864	100%	0.0	99%	KX893855.1
Select seq gb|KU922960.1|	Zika virus isolate MEX/InDRE/Sm/2016, complete genome	18860	18860	100%	0.0	99%	KU922960.1
Select seq gb|KX548902.1|	Zika virus isolate ZIKV/COL/FCC00093/2015 polyprotein gene, complete cds	18855	18855	100%	0.0	99%	KX548902.1
Select seq gb|KU922923.1|	Zika virus isolate MEX/InDRE/Lm/2016, complete genome	18855	18855	100%	0.0	99%	KU922923.1
Select seq gb|KX447510.1|	Zika virus isolate 1_0049_PF polyprotein gene, complete cds	18833	18833	100%	0.0	99%	KX447510.1
Select seq gb|KU991811.1|	Zika virus isolate Brazil/2016/INMI1 polyprotein gene, complete cds	18827	18827	100%	0.0	99%	KU991811.1
Select seq gb|KY075932.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL001Sa polyprotein gene, complete cds	18822	18822	100%	0.0	99%	KY075932.1
Select seq gb|KX447512.1|	Zika virus isolate 1_0181_PF polyprotein gene, complete cds	18822	18822	100%	0.0	99%	KX447512.1
Select seq gb|KX369547.1|	Zika virus strain PF13/251013-18, complete genome	18822	18822	100%	0.0	99%	KX369547.1
Select seq gb|KU509998.3|	Zika virus strain Haiti/1225/2014, complete genome	18822	18822	100%	0.0	99%	KU509998.3
Select seq gb|KJ776791.2|	Zika virus strain H/PF/2013, complete genome	18816	18816	100%	0.0	99%	KJ776791.2
Select seq gb|KX447509.1|	Zika virus isolate 1_0087_PF polyprotein gene, complete cds	18816	18816	100%	0.0	99%	KX447509.1
Select seq gb|KX447513.1|	Zika virus isolate 1_0134_PF polyprotein gene, complete cds	18811	18811	100%	0.0	99%	KX447513.1
Select seq gb|KR872956.1|	Zika virus strain 17829 polyprotein gene, complete cds	18805	18805	100%	0.0	99%	KR872956.1
Select seq gb|KX197205.1|	Zika virus isolate 9, complete genome	18805	18805	100%	0.0	99%	KX197205.1
Select seq gb|KX447515.1|	Zika virus isolate 1_0030_PF polyprotein gene, complete cds	18805	18805	100%	0.0	99%	KX447515.1
Select seq gb|KX447511.1|	Zika virus isolate 1_0015_PF polyprotein gene, complete cds	18805	18805	100%	0.0	99%	KX447511.1
Select seq gb|KX280026.1|	Zika virus isolate Paraiba_01, complete genome	18805	18805	100%	0.0	99%	KX280026.1
Select seq gb|KU321639.1|	Zika virus strain ZikaSPH2015, complete genome	18805	18805	100%	0.0	99%	KU321639.1
Select seq gb|KX447514.1|	Zika virus isolate 1_0035_PF polyprotein gene, complete cds	18800	18800	100%	0.0	99%	KX447514.1
Select seq gb|KX051563.1|	Zika virus isolate Haiti/1/2016, complete genome	18800	18800	100%	0.0	99%	KX051563.1
Select seq gb|KX447516.1|	Zika virus isolate 1_0111_PF polyprotein gene, complete cds	18794	18794	100%	0.0	99%	KX447516.1
Select seq gb|KU729218.1|	Zika virus isolate BeH828305 polyprotein gene, complete cds	18794	18794	100%	0.0	99%	KU729218.1
Select seq gb|KU707826.1|	Zika virus isolate SSABR1, complete genome	18794	18794	100%	0.0	99%	KU707826.1
Select seq gb|KU365779.1|	Zika virus strain BeH819966 polyprotein gene, complete cds	18794	18794	100%	0.0	99%	KU365779.1
Select seq gb|KX262887.1|	Zika virus isolate 103451, complete genome	18788	18788	100%	0.0	99%	KX262887.1
Select seq gb|KX197192.1|	Zika virus isolate ZIKV/H.sapiens/Brazil/PE243/2015, complete genome	18788	18788	100%	0.0	99%	KX197192.1
Select seq gb|KU497555.1|	Zika virus isolate Brazil-ZKV2015, complete genome	18785	18785	99%	0.0	99%	KU497555.1
Select seq gb|KX811222.1|	Zika virus isolate Brazil_2015_MG, complete genome	18783	18783	100%	0.0	99%	KX811222.1
Select seq gb|KX694534.2|	Zika virus strain ZIKV/Homo sapiens/HND/R103451/2015, complete genome	18777	18777	100%	0.0	99%	KX694534.2
Select seq gb|KX879604.1|	Zika virus isolate SN089, complete genome	18777	18777	100%	0.0	99%	KX879604.1
Select seq gb|KU758877.1|	Zika virus isolate 17271 polyprotein gene, complete cds	18777	18777	100%	0.0	99%	KU758877.1
Select seq gb|KU926309.1|	Zika virus isolate Rio-U1, complete genome	18777	18777	100%	0.0	99%	KU926309.1
Select seq gb|KU365780.1|	Zika virus strain BeH815744 polyprotein gene, complete cds	18777	18777	100%	0.0	99%	KU365780.1
Select seq gb|KY014297.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-6864-URI polyprotein gene, complete cds	18776	18776	100%	0.0	99%	KY014297.1
Select seq gb|KU940228.1|	Zika virus isolate Bahia07, partial genome	18772	18772	100%	0.0	99%	KU940228.1
Select seq gb|KU365777.1|	Zika virus strain BeH818995 polyprotein gene, complete cds	18772	18772	100%	0.0	99%	KU365777.1
Select seq gb|KY328289.1|	Zika virus isolate HN16, complete genome	18766	18766	100%	0.0	99%	KY328289.1
Select seq gb|KX879603.1|	Zika virus isolate SN062, complete genome	18766	18766	100%	0.0	99%	KX879603.1
Select seq gb|KU501217.1|	Zika virus strain 8375 polyprotein gene, complete cds	18766	18766	100%	0.0	99%	KU501217.1
Select seq gb|KU365778.1|	Zika virus strain BeH819015 polyprotein gene, complete cds	18766	18766	100%	0.0	99%	KU365778.1
Select seq gb|KU312312.1|	Zika virus isolate Z1106033 polyprotein gene, complete cds	18766	18766	100%	0.0	99%	KU312312.1
Select seq gb|KU729217.2|	Zika virus isolate BeH823339 polyprotein gene, complete cds	18761	18761	100%	0.0	99%	KU729217.2
Select seq gb|KU527068.1|	Zika virus strain Natal RGN, complete genome	18761	18761	100%	0.0	99%	KU527068.1
Select seq gb|KU501216.1|	Zika virus strain 103344 polyprotein gene, complete cds	18761	18761	100%	0.0	99%	KU501216.1
Select seq gb|KY014327.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME167-PLA polyprotein gene, complete cds	18757	18757	100%	0.0	99%	KY014327.1
Select seq gb|KY120348.1|	Zika virus isolate CIENI551, complete genome	18755	18755	100%	0.0	99%	KY120348.1
Select seq gb|KX447517.1|	Zika virus isolate 1_0038_PF polyprotein gene, complete cds	18755	18755	100%	0.0	99%	KX447517.1
Select seq gb|KX247632.1|	Zika virus isolate MEX_I_7 polyprotein gene, complete cds	18755	18755	100%	0.0	99%	KX247632.1
Select seq gb|KU937936.1|	Zika virus isolate ZIKVNL00013 polyprotein gene, complete cds	18755	18755	100%	0.0	99%	KU937936.1
Select seq gb|KU501215.1|	Zika virus strain PRVABC59, complete genome	18755	18755	100%	0.0	99%	KU501215.1
Select seq gb|KX269878.1|	Zika virus isolate Haiti/2016/PD, complete genome	18752	18752	100%	0.0	99%	KX269878.1
Select seq gb|KX087101.3|	Zika virus strain ZIKV/Homo sapiens/PRI/PRVABC59/2015, complete genome	18750	18750	100%	0.0	99%	KX087101.3
Select seq gb|KY014315.1|	Zika virus isolate Zika virus/H.sapiens-wt/HND/2016/HU-ME152-SER polyprotein gene, complete cds	18750	18750	100%	0.0	99%	KY014315.1
Select seq gb|KY014304.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0180-SER polyprotein gene, complete cds	18750	18750	100%	0.0	99%	KY014304.1
Select seq gb|KX601168.1|	Zika virus strain ZIKV/Homo Sapiens/PRI/PRVABC59/2015, complete genome	18750	18750	100%	0.0	99%	KX601168.1
Select seq gb|KX520666.1|	Zika virus isolate HS-2015-BA-01 polyprotein gene, complete cds	18750	18750	100%	0.0	99%	KX520666.1
Select seq gb|KX446951.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_I-7/2016, complete genome	18744	18744	100%	0.0	99%	KX446951.2
Select seq gb|KY014296.1|	Zika virus isolate Zika virus/H.sapiens-wt/BRA/2016/FC-DQ131D1-URI polyprotein gene, complete cds	18744	18744	100%	0.0	99%	KY014296.1
Select seq gb|KX806557.2|	Zika virus isolate TS17-2016, complete genome	18744	18744	100%	0.0	99%	KX806557.2
Select seq gb|KX856011.1|	Zika virus strain ZIKV/Aedes sp./MEX_I-44/2016, complete genome	18744	18744	100%	0.0	99%	KX856011.1
Select seq gb|KX377337.1|	Zika virus strain PRVABC-59, complete genome	18744	18744	100%	0.0	99%	KX377337.1
Select seq gb|KU926310.1|	Zika virus isolate Rio-S1, complete genome	18744	18744	100%	0.0	99%	KU926310.1
Select seq gb|KU820898.1|	Zika virus isolate GZ01 polyprotein gene, complete cds	18744	18744	100%	0.0	99%	KU820898.1
Select seq gb|KX446950.2|	Zika virus strain ZIKV/Aedes.sp/MEX/MEX_2-81/2016, complete genome	18739	18739	100%	0.0	99%	KX446950.2
Select seq gb|KU870645.1|	Zika virus isolate FB-GWUH-2016, complete genome	18739	18739	100%	0.0	99%	KU870645.1
Select seq gb|KY075939.1|	Zika virus isolate ZIKV/Aedes_aegypti/USA/2016/FL08M polyprotein gene, complete cds	18733	18733	100%	0.0	99%	KY075939.1
Select seq gb|KY075933.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL008U polyprotein gene, complete cds	18733	18733	100%	0.0	99%	KY075933.1
Select seq gb|KY003153.1|	Zika virus strain ZIKV/34997/Pavia/2016 polyprotein gene, complete cds	18733	18733	100%	0.0	99%	KY003153.1
Select seq gb|KU853013.1|	Zika virus isolate Dominican Republic/2016/PD2, complete genome	18733	18733	100%	0.0	99%	KU853013.1
Select seq gb|KU853012.1|	Zika virus isolate Dominican Republic/2016/PD1, complete genome	18731	18731	100%	0.0	99%	KU853012.1
Select seq gb|KY075934.1|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL016U polyprotein gene, complete cds	18727	18727	100%	0.0	99%	KY075934.1
Select seq gb|KY014300.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0208-SER polyprotein gene, complete cds	18727	18727	100%	0.0	99%	KY014300.1
Select seq dbj|LC190723.1|	Zika virus genomic RNA, complete genome, strain: ZIKV/Hu/Yokohama/1/2016	18727	18727	100%	0.0	99%	LC190723.1
Select seq gb|KX056898.1|	Zika virus isolate Zika virus/GZ02/2016 polyprotein gene, complete cds	18727	18727	100%	0.0	99%	KX056898.1
Select seq gb|KU955590.1|	Zika virus isolate Z16019 polyprotein gene, complete cds	18727	18727	100%	0.0	99%	KU955590.1
Select seq gb|KX766028.1|	Zika virus isolate R114916, complete genome	18724	18724	100%	0.0	99%	KX766028.1
Select seq gb|KY014321.1|	Zika virus isolate Zika virus/H.sapiens-wt/DOM/2016/BB-0115-SER polyprotein gene, complete cds	18722	18722	100%	0.0	99%	KY014321.1
Select seq gb|KU740184.2|	Zika virus isolate GD01 polyprotein gene, complete cds	18722	18722	100%	0.0	99%	KU740184.2
Select seq gb|KU761564.1|	Zika virus isolate GDZ16001 polyprotein gene, complete cds	18722	18722	100%	0.0	99%	KU761564.1
Select seq gb|KY014295.1|	Zika virus isolate Zika virus/H.sapiens-wt/USA/2016/FL-010-URI polyprotein gene, complete cds	18716	18716	100%	0.0	99%	KY014295.1
Select seq gb|KX842449.2|	Zika virus isolate ZIKV/Homo_sapiens/USA/2016/FL010U polyprotein gene, complete cds	18716	18716	100%	0.0	99%	KX842449.2
Select seq gb|KY120349.1|	Zika virus isolate CIENI551, complete genome	18713	18713	100%	0.0	99%	KY120349.1
Select seq gb|KY003154.1|	Zika virus strain ZIKV/VR10599/Pavia/2016 polyprotein gene, complete cds	18711	18711	100%	0.0	99%	KY003154.1
Select seq gb|KX766029.1|	Zika virus isolate R116265, complete genome	18711	18711	100%	0.0	99%	KX766029.1