niman Posted January 24, 2017 Report Posted January 24, 2017 (edited) State Veterinary Institute Prague Sidlistni has released a full 217 Chicken H5N8 sequence, A/chicken/Czech Republic/206-17_2/2017, at GISAID. Edited January 24, 2017 by niman
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Isolate name: A/chicken/Czech Republic/206-17_2/2017(H5N8) Isolate ID: EPI_ISL_242817 Passage details/history: Type: A / H5N8 Lineage: Sample information Collection date: 2017-01-06 Host Gallus gallus Additional host information: Domestic status: Domestic Is vaccinated: Location: Czech Republic / South Moravian Region / Okres Breclav Additional location information: Brod nad Dyjí Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: State Veterinary Institute Prague Sample ID given by the submitting laboratory: Authors: Nagy,Alexander Address: State Veterinary Institute Prague Sidlistni Prague, Czech Republic Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/chicken/Czech Republic/206-17_2/2017(H5N8) 2308 EPI887465 PB1 A/chicken/Czech Republic/206-17_2/2017(H5N8) 2309 EPI887466 PA A/chicken/Czech Republic/206-17_2/2017(H5N8) 2200 EPI887467 HA A/chicken/Czech Republic/206-17_2/2017(H5N8) 1742 EPI887468 NP A/chicken/Czech Republic/206-17_2/2017(H5N8) 1529 EPI887469 NA A/chicken/Czech Republic/206-17_2/2017(H5N8) 1425 EPI887470 MP A/chicken/Czech Republic/206-17_2/2017(H5N8) 991 EPI887471 NS A/chicken/Czech Republic/206-17_2/2017(H5N8) 855 EPI887472 Submitter information Submitter: Nagy, Alexander Submission Date: 2017-01-24 Last modifier: Nagy, Alexander Last modified: 2017-01-24 Address: State Veterinary Institute Prague Sidlistni Prague, Czech Republic
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3122.0 0.000000e+00 1699/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3109.0 0.000000e+00 1697/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3105.3 0.000000e+00 1696/1704 (99%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869938 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1695/1705 (99%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3088.7 0.000000e+00 1681/1686 (99%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI860401 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI859653 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI869928 A/chicken/Poland/85A/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI861224 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI873626 A/mute swan/Croatia/104/2016 (A/H5N8) segment 4 (HA) 3073.9 0.000000e+00 1688/1700 (99%) EPI861012 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1691/1705 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861222 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 4 (HA) 3062.9 0.000000e+00 1687/1704 (99%) EPI873212 A/chicken/Croatia/103/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1687/1702 (99%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI681299 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 4 (HA) 2987.2 0.000000e+00 1675/1704 (98%) EPI703602 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI675774 A/duck/Liaoning/S1001/2014 (A/H5N8) segment 4 (HA) 2976.1 0.000000e+00 1673/1704 (98%) EPI681290 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%) EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2965.0 0.000000e+00 1671/1704 (98%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887470 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1397/1397 (100%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2544.0 0.000000e+00 1389/1395 (99%) EPI869939 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%) EPI869935 A/mute swan/Poland/108/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%) EPI869933 A/chicken/Poland/79A/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%) EPI881900 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1387/1395 (99%) EPI873213 A/chicken/Croatia/103/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI869937 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI869934 A/chicken/Poland/85A/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI861014 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI861010 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI860510 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI860403 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI860395 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI859655 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1386/1395 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2523.6 0.000000e+00 1385/1395 (99%) EPI873627 A/mute swan/Croatia/104/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI869932 A/domestic goose/Poland/72/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI869925 A/domestic goose/Poland/33/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI863867 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI863851 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI863836 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI863828 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1386/1396 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1386/1396 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2521.8 0.000000e+00 1385/1395 (99%) EPI863859 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 6 (NA) 2518.1 0.000000e+00 1384/1395 (99%) EPI873625 A/mute swan/Croatia/9/2017 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1385/1396 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2516.3 0.000000e+00 1384/1395 (99%) EPI861013 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 6 (NA) 2512.6 0.000000e+00 1382/1395 (99%) EPI861015 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 6 (NA) 2510.7 0.000000e+00 1382/1395 (99%) EPI859213 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 6 (NA) 2510.7 0.000000e+00 1383/1395 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2510.7 0.000000e+00 1384/1396 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2505.2 0.000000e+00 1383/1396 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2499.6 0.000000e+00 1381/1395 (98%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2499.6 0.000000e+00 1381/1395 (98%) EPI703648 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 6 (NA) 2477.5 0.000000e+00 1377/1395 (98%) EPI869941 A/herring gull/Poland/84/2016 (A/H5N8) segment 6 (NA) 2453.5 0.000000e+00 1348/1358 (99%) EPI703642 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 6 (NA) 2444.2 0.000000e+00 1371/1395 (98%) EPI681357 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 6 (NA) 2433.2 0.000000e+00 1369/1395 (98%) EPI873660 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 6 (NA) 2414.7 0.000000e+00 1332/1345 (99%) EPI681358 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 6 (NA) 2411.0 0.000000e+00 1365/1395 (97%) EPI583873 A/duck/Shaoxing/5240/2013 (A/H0) segment 6 (NA) 2399.9 0.000000e+00 1363/1395 (97%) EPI591884 A/duck/Jiangxi/23970/2013 (A/H0) segment 6 (NA) 2394.4 0.000000e+00 1362/1395 (97%) EPI690794 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1361/1395 (97%) EPI561493 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1361/1395 (97%) EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2388.8 0.000000e+00 1362/1396 (97%
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1794.2 0.000000e+00 971/971 (100%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1766.5 0.000000e+00 966/971 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1761.0 0.000000e+00 965/971 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 964/971 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 964/971 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 964/971 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 964/971 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 963/971 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1744.4 0.000000e+00 962/971 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1738.8 0.000000e+00 961/971 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 960/971 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1733.3 0.000000e+00 961/972 (98%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 959/971 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 959/971 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 960/972 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 960/972 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 959/971 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 959/971 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1727.7 0.000000e+00 959/971 (98%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1725.9 0.000000e+00 958/970 (98%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1722.2 0.000000e+00 958/971 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1722.2 0.000000e+00 959/972 (98%) EPI774372 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 7 (MP) 1722.2 0.000000e+00 959/972 (98%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1722.2 0.000000e+00 958/971 (98%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1722.2 0.000000e+00 958/971 (98%) EPI774461 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 7 (MP) 1716.7 0.000000e+00 958/972 (98%) EPI704539 A/duck/Mongolia/709/2015 (A/H10N7) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI704531 A/duck/Mongolia/626/2015 (A/H10N7) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI704515 A/duck/Mongolia/499/2015 (A/H10N7) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI704343 A/duck/Mongolia/179/2015 (A/H3N8) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI704335 A/duck/Mongolia/173/2015 (A/H3N8) segment 7 (MP) 1700.0 0.000000e+00 954/971 (98%) EPI692379 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 7 (MP) 1694.5 0.000000e+00 953/971 (98%) EPI682954 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI682953 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI590050 A/duck/Vietnam/LBM798/2014 (A/H3N6) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI467812 A/European teal/Chany/63/2011 (A/H3N8) segment 7 (MP) 1689.0 0.000000e+00 952/971 (98%) EPI461550 A/duck/Hunan/S11090/2012 (A/H4N6) segment 7 (MP) 1683.4 0.000000e+00 951/971 (97%) EPI704449 A/duck/Mongolia/996/2015 (A/H3N8) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI704417 A/duck/Mongolia/543/2015 (A/H4N6) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI601676 A/duck/Jiangxi/34864/2013 (A/H0) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI599826 A/duck/Jiangxi/32213/2013 (A/H7N6) segment 7 (MP) 1672.3 0.000000e+00 949/971 (97%) EPI548388 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 7 (MP) 1668.6 0.000000e+00 948/971 (97%) EPI749996 A/environment/sichuan/322074/2015 (A/H4N6) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI682981 A/duck/Wuhan/WHYF05/2014 (A/H9N2) segment 7 (MP) 1666.8 0.000000e+00 949/972 (97%) EPI682951 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI682950 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI682949 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI590087 A/duck/Quang Ninh/90c112/2013 (A/H3N2) segment 7 (MP) 1666.8 0.000000e+00 948/971 (97%) EPI773768 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI753587 A/duck/Hokkaido/W9/2015 (A/H1N1) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI704294 A/duck/Mongolia/127/2015 (A/H4N6) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%) EPI704270 A/duck/Mongolia/101/2015 (A/H4N6) segment 7 (MP) 1661.3 0.000000e+00 947/971 (97%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887465 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 4150.5 0.000000e+00 2269/2280 (99%) EPI869806 A/duck/France/161108h/2016 (A/H5N8) segment 1 (PB2) 4139.5 0.000000e+00 2267/2280 (99%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3912.3 0.000000e+00 2226/2280 (97%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3879.1 0.000000e+00 2220/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3868.0 0.000000e+00 2218/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3807.1 0.000000e+00 2208/2281 (96%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI588965 A/chicken/Taiwan/a174/2015 (A/H5N3) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3796.0 0.000000e+00 2205/2280 (96%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3796.0 0.000000e+00 2205/2280 (96%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3790.4 0.000000e+00 2206/2282 (96%) EPI588973 A/duck/Taiwan/a068/2015 (A/H5N8) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3784.9 0.000000e+00 2203/2280 (96%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3784.9 0.000000e+00 2203/2280 (96%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3779.4 0.000000e+00 2202/2280 (96%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3779.4 0.000000e+00 2202/2280 (96%) EPI750185 A/goose/Taiwan/01042/2015 (A/H5N3) segment 1 (PB2) 3773.8 0.000000e+00 2203/2282 (96%) EPI750111 A/duck/Taiwan/A3400/2015 (A/H5N8) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3773.8 0.000000e+00 2201/2280 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3762.7 0.000000e+00 2200/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3757.2 0.000000e+00 2199/2281 (96%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3757.2 0.000000e+00 2198/2280 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3751.7 0.000000e+00 2199/2282 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3751.7 0.000000e+00 2199/2282 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3751.7 0.000000e+00 2198/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3746.1 0.000000e+00 2197/2281 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3746.1 0.000000e+00 2196/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3746.1 0.000000e+00 2178/2253 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3740.6 0.000000e+00 2196/2281 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3735.0 0.000000e+00 2195/2281 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3735.0 0.000000e+00 2196/2282 (96%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3724.0 0.000000e+00 2192/2280 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3722.1 0.000000e+00 2179/2261 (96%) EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3718.4 0.000000e+00 2191/2280 (96%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3714.7 0.000000e+00 2190/2280 (96%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3714.7 0.000000e+00 2190/2280 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3714.7 0.000000e+00 2170/2249 (96%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3712.9 0.000000e+00 2190/2280 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3712.9 0.000000e+00 2192/2282 (96%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3707.3 0.000000e+00 2188/2280 (95%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3707.3 0.000000e+00 2189/2280 (96%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3705.5 0.000000e+00 2176/2261 (96%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3696.3 0.000000e+00 2187/2280 (95%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3692.6 0.000000e+00 2159/2239 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3690.7 0.000000e+00 2187/2281 (95%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3685.2 0.000000e+00 2186/2281 (95%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3679.6 0.000000e+00 2186/2282 (95%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3676.0 0.000000e+00 2170/2259 (96%) EPI372383 A/teal/Egypt/13203-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3674.1 0.000000e+00 2185/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3674.1 0.000000e+00 2184/2281 (95%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3674.1 0.000000e+00 2184/2281 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3674.1 0.000000e+00 2184/2281 (95%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3668.6 0.000000e+00 2182/2280 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3668.6 0.000000e+00 2184/2282 (95%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3668.6 0.000000e+00 2183/2281 (95%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3663.0 0.000000e+00 2181/2280 (95%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3663.0 0.000000e+00 2182/2281 (95%) EPI372296 A/teal/Egypt/00688-NAMRU3/2004 (A/H11N9) segment 1 (PB2) 3663.0 0.000000e+00 2183/2282 (95%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3657.5 0.000000e+00 2182/2282 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3651.9 0.000000e+00 2181/2282 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3646.4 0.000000e+00 2180/2282 (95%) EPI618544 A/mallard/Sweden/101754/2009 (A/H0) segment 1 (PB2) 3640.9 0.000000e+00 2179/2282 (95%) EPI514604 A/mallard/Sweden/50108/2006 (A/H4N6) segment 1 (PB2) 3640.9 0.000000e+00 2178/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3640.9 0.000000e+00 2179/2282 (95%) EPI618253 A/mallard/Sweden/79390/2008 (A/H11N9) segment 1 (PB2) 3635.3 0.000000e+00 2178/2282 (95%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3629.8 0.000000e+00 2175/2280 (95%) EPI372320 A/shoveler/Egypt/09864-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3629.8 0.000000e+00 2177/2282 (95%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3624.2 0.000000e+00 2174/2280 (95%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887466 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI704370 A/duck/Mongolia/211/2015 (A/H3N8) segment 2 (PB1) 4056.4 0.000000e+00 2249/2275 (98%) EPI704362 A/duck/Mongolia/208/2015 (A/H3N8) segment 2 (PB1) 4056.4 0.000000e+00 2249/2275 (98%) EPI704313 A/duck/Mongolia/167/2015 (A/H3N8) segment 2 (PB1) 4056.4 0.000000e+00 2249/2275 (98%) EPI693704 A/duck/Mongolia/83/2015 (A/H3N8) segment 2 (PB1) 4056.4 0.000000e+00 2249/2275 (98%) EPI693696 A/duck/Mongolia/20/2015 (A/H3N8) segment 2 (PB1) 4056.4 0.000000e+00 2249/2275 (98%) EPI540405 A/waterfowl/Bangladesh/12301/2013 (A/H6N7) segment 2 (PB1) 3991.7 0.000000e+00 2239/2277 (98%) EPI464920 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 2 (PB1) 3984.3 0.000000e+00 2233/2270 (98%) EPI514974 A/mallard/Sweden/80261/2008 (A/H4N9) segment 2 (PB1) 3973.3 0.000000e+00 2234/2275 (98%) EPI560057 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 2 (PB1) 3958.5 0.000000e+00 2231/2274 (98%) EPI617820 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3945.6 0.000000e+00 2229/2275 (97%) EPI618043 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 2 (PB1) 3934.5 0.000000e+00 2227/2275 (97%) EPI617954 A/Mediterranean gull/Republic of Georgia/1/2011 (A/H9N3) segment 2 (PB1) 3934.5 0.000000e+00 2227/2275 (97%) EPI618617 A/mallard/Sweden/133546/2011 (A/H10N4) segment 2 (PB1) 3923.4 0.000000e+00 2225/2275 (97%) EPI617793 A/yellow-legged gull/Republic of Georgia/1/2012 (A/H0) segment 2 (PB1) 3923.4 0.000000e+00 2225/2275 (97%) EPI372361 A/shoveler/Egypt/14879-NAMRU3/2006 (A/H7N1) segment 2 (PB1) 3923.4 0.000000e+00 2225/2275 (97%) EPI617988 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 2 (PB1) 3904.9 0.000000e+00 2221/2274 (97%) EPI617899 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 2 (PB1) 3901.2 0.000000e+00 2221/2275 (97%) EPI464928 A/chicken/Italy/11VIR-7548/2011 (A/H5N2) segment 2 (PB1) 3895.7 0.000000e+00 2221/2276 (97%) EPI617760 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI182047 A/common eider/Netherlands/1/2006 (A/H3N8) segment 2 (PB1) 3890.2 0.000000e+00 2219/2275 (97%) EPI623944 A/chicken/England/26352/2015 (A/H7N7) segment 2 (PB1) 3879.1 0.000000e+00 2217/2275 (97%) EPI629347 A/chicken/NL-Barneveld/15004745-006-010/2015 (A/H7N7) segment 2 (PB1) 3868.0 0.000000e+00 2216/2276 (97%) EPI629339 A/Chicken/NL-Barneveld/15004745-001-005/2015 (A/H7N7) segment 2 (PB1) 3868.0 0.000000e+00 2216/2276 (97%) EPI839726 A/chicken/France/150169a/2015 (A/H5N1) segment 2 (PB1) 3862.5 0.000000e+00 2215/2276 (97%) EPI464944 A/chicken/Italy/12VIR-7785-67/2012 (A/H5N2) segment 2 (PB1) 3845.8 0.000000e+00 2212/2276 (97%) EPI464936 A/turkey/Italy/12VIR-6607-5/2012 (A/H5N2) segment 2 (PB1) 3845.8 0.000000e+00 2212/2276 (97%) EPI464952 A/turkey/Italy/12VIR-8036-2/2012 (A/H5N2) segment 2 (PB1) 3840.3 0.000000e+00 2211/2276 (97%) EPI345434 A/Larus argentatus/Belgium/02936cls9/2010 (A/H5N2) segment 2 (PB1) 3825.5 0.000000e+00 2202/2267 (97%) EPI704534 A/duck/Mongolia/709/2015 (A/H10N7) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI704526 A/duck/Mongolia/626/2015 (A/H10N7) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI704509 A/duck/Mongolia/499/2015 (A/H10N7) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%) EPI618407 A/mallard/Sweden/101589/2009 (A/H11N9) segment 2 (PB1) 3818.1 0.000000e+00 2207/2276 (96%) EPI704396 A/duck/Mongolia/520/2015 (A/H1N1) segment 2 (PB1) 3812.6 0.000000e+00 2205/2275 (96%) EPI618636 A/mallard/Sweden/68529/2007 (A/H12N5) segment 2 (PB1) 3812.6 0.000000e+00 2206/2276 (96%) EPI618622 A/mallard/Sweden/60069/2007 (A/H12N5) segment 2 (PB1) 3812.6 0.000000e+00 2206/2276 (96%) EPI618937 A/mallard/Sweden/101165/2009 (A/H8N4) segment 2 (PB1) 3807.1 0.000000e+00 2204/2275 (96%) EPI618651 A/mallard/Sweden/69794/2007 (A/H12N5) segment 2 (PB1) 3801.5 0.000000e+00 2204/2276 (96%) EPI618605 A/mallard/Sweden/107688/2009 (A/H10N1) segment 2 (PB1) 3801.5 0.000000e+00 2203/2275 (96%) EPI475930 A/mallard/Iceland/1007/2011 (A/H3N6) segment 2 (PB1) 3801.5 0.000000e+00 2204/2276 (96%) EPI211183 A/mallard/Poland/16/09 (A/H7N7) segment 2 (PB1) 3801.5 0.000000e+00 2204/2276 (96%) EPI704501 A/duck/Mongolia/326/2015 (A/H10N3) segment 2 (PB1) 3796.0 0.000000e+00 2203/2276 (96%) EPI704479 A/duck/Mongolia/245/2015 (A/H10N3) segment 2 (PB1) 3790.4 0.000000e+00 2202/2276 (96%) EPI704297 A/duck/Mongolia/141/2015 (A/H0N2) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%) EPI387542 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 2 (PB1) 3790.4 0.000000e+00 2204/2278 (96%) EPI378008 A/mallard/Netherlands/29/2010 (A/H2N3) segment 2 (PB1) 3784.9 0.000000e+00 2202/2277 (96%) EPI618014 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 2 (PB1) 3779.4 0.000000e+00 2201/2277 (96%) EPI618448 A/mallard/Sweden/101993/2009 (A/H2N9) segment 2 (PB1) 3762.7 0.000000e+00 2197/2276 (96%) EPI475944 A/great black-backed gull/Iceland/1110/2011 (A/H5N2) segment 2 (PB1) 3762.7 0.000000e+00 2197/2276 (96%) EPI457917 A/duck/Guangxi/GXd-4/2011 (A/H1N2) segment 2 (PB1) 3762.7 0.000000e+00 2197/2276 (96%) EPI367587 A/mallard/Czech Republic/15008-11K/2009 (A/H5N3) segment 2 (PB1) 3757.2 0.000000e+00 2196/2276 (96%) EPI687185 A/chicken/Scotland/532/2016 (A/H5N1) segment 2 (PB1) 3748.0 0.000000e+00 2149/2208 (97%) EPI457909 A/duck/Guangxi/GXd-1/2011 (A/H1N2) segment 2 (PB1) 3740.6 0.000000e+00 2193/2276 (96%) EPI439584 A/avian/Israel/289/2001 (A/H6N2) segment 2 (PB1) 3735.0 0.000000e+00 2192/2276 (96%) EPI433380 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 2 (PB1) 3735.0 0.000000e+00 2193/2277 (96%) EPI367595 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 2 (PB1) 3735.0 0.000000e+00 2193/2277 (96%) EPI284355 A/mallard/Czech Republic/15902-17K/2009 (A/H6N2) segment 2 (PB1) 3735.0 0.000000e+00 2193/2277 (96%) EPI336987 A/duck/Zhejiang/2245/2011 (A/H5N1) segment 2 (PB1) 3729.5 0.000000e+00 2192/2277 (96%) EPI527622 A/mallard/Mongolia/1581/2010 (A/H3N8) segment 2 (PB1) 3724.0 0.000000e+00 2191/2277 (96%) EPI439586 A/avian/Israel/320/2001 (A/H6N2) segment 2 (PB1) 3720.3 0.000000e+00 2189/2276 (96%) EPI692454 A/duck/Guizhou/S1167/2010 (A/H4N6) segment 2 (PB1) 3718.4 0.000000e+00 2189/2276 (96%) EPI618214 A/mallard/Sweden/1689/2002 (A/H7N7) segment 2 (PB1) 3718.4 0.000000e+00 2190/2277 (96%) EPI618201 A/mallard/Sweden/1645/2002 (A/H7N7) segment 2 (PB1) 3718.4 0.000000e+00 2190/2277 (96%) EPI617059 A/mallard/Sweden/1671/2002 (A/H7N7) segment 2 (PB1) 3718.4 0.000000e+00 2190/2277 (96%) EPI527631 A/mallard /Mongolia/1551/2010 (A/H3N1) segment 2 (PB1) 3718.4 0.000000e+00 2191/2278 (96%) EPI335410 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 2 (PB1) 3718.4 0.000000e+00 2190/2277 (96%) EPI692423 A/duck/Guangxi/S1107/2010 (A/H4N6) segment 2 (PB1) 3712.9 0.000000e+00 2189/2277 (96%) EPI618139 A/mallard/Sweden/1690/2002 (A/H7N7) segment 2 (PB1) 3712.9 0.000000e+00 2190/2278 (96%) EPI485721 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3712.9 0.000000e+00 2188/2276 (96%) EPI236192 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3712.9 0.000000e+00 2188/2276 (96%) EPI173879 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3712.9 0.000000e+00 2190/2278 (96%) EPI167837 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3712.9 0.000000e+00 2190/2278 (96%) EPI692430 A/duck/Guangxi/S1211/2010 (A/H4N6) segment 2 (PB1) 3707.3 0.000000e+00 2187/2276 (96%) EPI377795 A/mallard/Sweden/57/2002 (A/H2N3) segment 2 (PB1) 3707.3 0.000000e+00 2187/2276 (96%) EPI336010 A/teal/Chany/444/2009 (A/H8N8) segment 2 (PB1) 3707.3 0.000000e+00 2189/2278 (96%) EPI285821 A/avian/Egypt/920431/2006 (A/H9N2) segment 2 (PB1) 3707.3 0.000000e+00 2188/2277 (96%) EPI540261 A/duck/Bangladesh/1584/2010 (A/H1N3) segment 2 (PB1) 3701.8 0.000000e+00 2188/2278 (96%) EPI540165 A/duck/Bangladesh/1578/2009 (A/H11N3) segment 2 (PB1) 3701.8 0.000000e+00 2186/2276 (96%) EPI540157 A/duck/Bangladesh/1595/2010 (A/H11N3) segment 2 (PB1) 3701.8 0.000000e+00 2186/2276 (96%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3701.8 0.000000e+00 2187/2277 (96%) EPI618644 A/mallard/Sweden/366/2002 (A/H11N9) segment 2 (PB1) 3696.3 0.000000e+00 2186/2277 (96%) EPI485608 A/mallard/Sweden/16/2002 (A/H12N9) segment 2 (PB1) 3696.3 0.000000e+00 2186/2277 (96%) EPI229961 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3696.3 0.000000e+00 2187/2278 (96%) EPI169291 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3696.3 0.000000e+00 2187/2278 (96%) EPI618913 A/mallard/Sweden/51726/2006 (A/H10N4) segment 2 (PB1) 3690.7 0.000000e+00 2186/2278 (95%) EPI618885 A/mallard/Sweden/51619/2006 (A/H10N4) segment 2 (PB1) 3690.7 0.000000e+00 2186/2278 (95%) EPI514743 A/mallard/Sweden/4508/2004 (A/H4N6) segment 2 (PB1) 3690.7 0.000000e+00 2184/2276 (95%) EPI439580 A/avian/Israel/824/2005 (A/H10N2) segment 2 (PB1) 3690.7 0.000000e+00 2184/2276 (95%) EPI618135 A/mallard/Sweden/6039/2005 (A/H10N4) segment 2 (PB1) 3685.2 0.000000e+00 2183/2276 (95%) EPI533778 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 2 (PB1) 3685.2 0.000000e+00 2184/2277 (95%) EPI533772 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 2 (PB1) 3685.2 0.000000e+00 2184/2277 (95%) EPI514671 A/mallard/Sweden/7582/2003 (A/H4N6) segment 2 (PB1) 3685.2 0.000000e+00 2186/2279 (95%) EPI451157 A/mallard/Netherlands/10-Cam/1999 (A/H1N1) segment 2 (PB1) 3685.2 0.000000e+00 2183/2276 (95%) EPI377678 A/mallard/Sweden/99/2002 (A/H2N3) segment 2 (PB1) 3685.2 0.000000e+00 2184/2277 (95%) EPI372265 A/shoveler/Egypt/20313-NAMRU3/2003 (A/H5N2) segment 2 (PB1) 3685.2 0.000000e+00 2186/2279 (95%) EPI251841 A/northern shoveler/Netherlands/18/1999 (A/H11N9) segment 2 (PB1) 3685.2 0.000000e+00 2183/2276 (95%) EPI251652 A/mallard/Netherlands/15/1999 (A/H11N9) segment 2 (PB1) 3685.2 0.000000e+00 2183/2276 (95%) EPI89999 A/shoveler/Netherlands/19/1999 (A/H11N9) segment 2 (PB1) 3685.2 0.000000e+00 2183/2276 (95%) EPI618966 A/mallard/Sweden/1417/2002 (A/H10N7) segment 2 (PB1) 3679.6 0.000000e+00 2183/2277 (95%) EPI618848 A/mallard/Sweden/8023/2005 (A/H10N4) segment 2 (PB1) 3679.6 0.000000e+00 2183/2277 (95%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887467 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2135/2148 (99%) EPI869808 A/duck/France/161108h/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3718.4 0.000000e+00 2106/2152 (97%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3712.9 0.000000e+00 2105/2152 (97%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3707.3 0.000000e+00 2105/2153 (97%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3696.3 0.000000e+00 2102/2152 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3690.7 0.000000e+00 2101/2152 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3624.2 0.000000e+00 2089/2152 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3602.1 0.000000e+00 2084/2151 (96%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3596.5 0.000000e+00 2084/2152 (96%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3591.0 0.000000e+00 2082/2151 (96%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3585.5 0.000000e+00 2082/2152 (96%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3530.1 0.000000e+00 2072/2152 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3524.5 0.000000e+00 2071/2152 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3524.5 0.000000e+00 2070/2151 (96%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3519.0 0.000000e+00 2069/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3513.4 0.000000e+00 2070/2153 (96%) EPI244544 A/mallard/Korea/GH171/2007 (A/H7N7) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI244507 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3513.4 0.000000e+00 2069/2152 (96%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3507.9 0.000000e+00 2069/2153 (96%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3507.9 0.000000e+00 2069/2153 (96%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3507.9 0.000000e+00 2068/2152 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3502.4 0.000000e+00 2066/2151 (96%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887469 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI865159 A/mute swan/Croatia/70/2016 (A/H5N8) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI869810 A/duck/France/161108h/2016 (A/H5N8) segment 5 (NP) 2699.1 0.000000e+00 1485/1497 (99%) EPI617879 A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 5 (NP) 2621.5 0.000000e+00 1471/1497 (98%) EPI618049 A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI367573 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 5 (NP) 2582.7 0.000000e+00 1464/1497 (97%) EPI858837 A/duck/India/10CA01/2016 (A/H5N8) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678072 A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678056 A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678048 A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678032 A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678024 A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678008 A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI678000 A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI677992 A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI677984 A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI560341 A/Italy/3/2013 (A/H7N7) segment 5 (NP) 2560.6 0.000000e+00 1460/1497 (97%) EPI841780 A/chicken/Wales/600-020823/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI841772 A/chicken/England/474-016250/2014 (A/H4N6) segment 5 (NP) 2555.0 0.000000e+00 1460/1498 (97%) EPI678088 A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI678080 A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI678064 A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI182084 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%) EPI678040 A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI678016 A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533780 A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI533774 A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 5 (NP) 2549.5 0.000000e+00 1458/1497 (97%) EPI476119 A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476106 A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476099 A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476069 A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476053 A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476046 A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI476033 A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 5 (NP) 2549.5 0.000000e+00 1459/1498 (97%) EPI773766 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI513586 A/mallard/Sweden/80415/2008 (A/H0) segment 5 (NP) 2544.0 0.000000e+00 1457/1497 (97%) EPI476113 A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI476039 A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI476026 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 5 (NP) 2544.0 0.000000e+00 1458/1498 (97%) EPI63227 A/teal/Italy/3931-38/2005 (A/H5N2) segment 5 (NP) 2544.0 0.000000e+00 1459/1499 (97%) EPI248513 A/wild duck/Germany/WV30/06 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1450/1487 (97%) EPI182076 A/common teal/Netherlands/2/2005 (A/H6N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI182044 A/common eider/Netherlands/1/2006 (A/H3N8) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI860394 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP) 2532.9 0.000000e+00 1456/1498 (97%) EPI178531 A/Duck/Italy/62330/2006 (A/H10N7) segment 5 (NP) 2532.9 0.000000e+00 1455/1497 (97%) EPI861394 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP) 2529.2 0.000000e+00 1455/1498 (97%) EPI860402 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI859656 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP) 2527.3 0.000000e+00 1455/1498 (97%) EPI178556 A/Mallard/Italy/46341-12/2006 (A/H10N7) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI173732 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI167810 A/duck/Italy/69238/2007 (A/H1N1) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%) EPI868849 A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP) 2521.8 0.000000e+00 1454/1498 (97%) EPI839729 A/chicken/France/150169a/2015 (A/H5N1) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI439828 A/domestic green-winged teal/Hunan/2036/2007 (A/H3N6) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI816832 A/turkey/Poland/14/2013 (A/H9N2) segment 5 (NP) 2512.6 0.000000e+00 1432/1468 (97%) EPI561718 A/chicken/England/2830/2015 (A/H7N7) segment 5 (NP) 2510.7 0.000000e+00 1452/1498 (96%) EPI251859 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI251618 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI229963 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1437/1475 (97%) EPI169293 A/duck/France/05057b/2005 (A/H5N2) segment 5 (NP) 2510.7 0.000000e+00 1437/1475 (97%) EPI514048 A/mallard/Sweden/68504/2007 (A/H4N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI118126 A/Chicken/Italy/9097/97 (A/H5N9) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI63189 A/chicken/Italy/22A/1998 (A/H5N9) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI618926 A/mallard/Sweden/52057/2006 (A/H0) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618536 A/mallard/Sweden/101754/2009 (A/H0) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI514198 A/mallard/Sweden/52462/2006 (A/H4N6) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI618873 A/mallard/Sweden/5824/2005 (A/H10N7) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI332954 A/Anas_platyrhynchos/Camargue/091863/09 (A/H10N7) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI251648 A/mallard/Netherlands/12/2001 (A/H4N2) segment 5 (NP) 2494.1 0.000000e+00 1449/1498 (96%) EPI464915 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 5 (NP) 2490.4 0.000000e+00 1414/1447 (97%) EPI618918 A/mallard/Sweden/51933/2006 (A/H10N9) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI618770 A/mallard/Sweden/52903/2006 (A/H10N9) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI618520 A/mallard/Sweden/7146/2004 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI514839 A/mallard/Sweden/1869/2003 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI514794 A/mallard/Sweden/3271/2003 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI514787 A/mallard/Sweden/3223/2003 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI485704 A/mallard/Netherlands/8/2001 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI372435 A/shoveler/Egypt/00006-NAMRU3/2007 (A/H10N1) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI284614 A/swan/Slovenia/53/2009 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI251778 A/mallard/Sweden/62/2003 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI284342 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 5 (NP) 2484.9 0.000000e+00 1446/1497 (96%) EPI618660 A/mallard/Sweden/101111/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618535 A/mallard/Sweden/50980/2006 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618493 A/mallard/Sweden/2321/2004 (A/H0) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618484 A/mallard/Sweden/100832/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618470 A/mallard/Sweden/101120/2009 (A/H2N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618460 A/mallard/Sweden/101082/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618446 A/mallard/Sweden/101163/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618431 A/mallard/Sweden/102103/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618355 A/mallard/Sweden/100760/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618348 A/mallard/Sweden/100687/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618336 A/mallard/Sweden/100740/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI618322 A/mallard/Sweden/100791/2009 (A/H11N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI617111 A/mallard/Sweden/80329/2008 (A/H11N5) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI514846 A/mallard/Sweden/1883/2003 (A/H4N3) segment 5 (NP) 2483.0 0.000000e+00 1447/1498 (96%) EPI514780 A/mallard/Sweden/3221/2003 (A/H4N6) segment 5 (NP) 2483.0 0.000000e+00 1447/1498 (96%) EPI514115 A/mallard/Sweden/60043/2007 (A/H4N6) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI514038 A/mallard/Sweden/68583/2007 (A/H4N6) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI513942 A/mallard/Sweden/69698/2007 (A/H4N6) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%) EPI513935 A/mallard/Sweden/69673/2007 (A/H4N6) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Align Segment-ID Name Score E-Value Identity EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 823/829 (99%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1493.2 0.000000e+00 822/829 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1489.5 0.000000e+00 816/821 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 815/820 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 821/829 (99%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1484.0 0.000000e+00 817/824 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 820/829 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1480.3 0.000000e+00 814/823 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 813/820 (99%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 813/820 (99%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 813/820 (99%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 813/820 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 819/829 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 815/823 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 807/812 (99%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1472.9 0.000000e+00 812/820 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 814/823 (98%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 813/823 (98%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 812/823 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 811/823 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 811/823 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1445.2 0.000000e+00 809/822 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 814/830 (98%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 814/830 (98%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 813/830 (97%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1434.1 0.000000e+00 807/822 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 807/824 (97%) EPI643151 A/Environment/Guangdong/GZ55/2013(H5N8) (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 811/831 (97%) EPI561505 A/Baikal teal/Korea/H52/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 810/830 (97%) EPI530994 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 810/830 (97%) EPI509710 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 810/830 (97%) EPI762162 A/goose/Eastern China/CZ/2013 (A/H5N8) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI602042 A/duck/Ningbo/3262/2013 (A/H0) segment 8 (NS) 1417.5 0.000000e+00 804/822 (97%) EPI681416 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 803/821 (97%) EPI681415 A/goose/Zhejiang/925037/2014 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 803/821 (97%) EPI507677 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 8 (NS) 1412.0 0.000000e+00 804/823 (97%) EPI703687 A/goose/Eastern China/S0408/2014 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 804/824 (97%) EPI681406 A/goose/Zhejiang/925106/2014 (A/H5N6) segment 8 (NS) 1410.1 0.000000e+00 802/821 (97%) EPI762154 A/duck/Eastern China/JY/2014 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 802/822 (97%) EPI703679 A/duck/Eastern China/S1210/2013 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 802/822 (97%) EPI646032 A/goose/Jiangsu/WX202/2014 (A/H5N8) segment 8 (NS) 1391.6 0.000000e+00 805/830 (96%) EPI681413 A/duck/Zhejiang/925019/2014 (A/H5N8) segment 8 (NS) 1388.0 0.000000e+00 798/821 (97%) EPI681414 A/duck/Zhejiang/925169/2014 (A/H5N8) segment 8 (NS) 1382.4 0.000000e+00 797/821 (97%) EPI461611 A/duck/Hunan/S11643/2012 (A/H4N9) segment 8 (NS) 1371.3 0.000000e+00 797/824 (96%) EPI461603 A/duck/Hunan/S11547/2012 (A/H4N9) segment 8 (NS) 1371.3 0.000000e+00 797/824 (96%)
niman Posted January 24, 2017 Author Report Posted January 24, 2017 Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1aNOepBDPUd0zdRnQE1UbSW8djsk&ll=48.778889376225244%2C16.78143168378915&z=10
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