niman Posted January 27, 2017 Report Share Posted January 27, 2017 Croatian Veterinary Institute Poultry Centre has released H5 and N5 sequences, A/mute swan/Croatia/102/2016, (at GISAID) from a mute swan jn Crkveni Bok Croatia. Link to comment Share on other sites More sharing options...
niman Posted January 27, 2017 Author Report Share Posted January 27, 2017 Isolate name: A/mute swan/Croatia/102/2016 Isolate ID: EPI_ISL_240101 Passage details/history: 0 Type: A / H5N5 Lineage: Sample information Collection date: 2016-12-27 Host Cygnus olor Additional host information: Domestic status: Wild Is vaccinated: Location: Croatia / Sisacko-Moslavacka Zupanija Additional location information: Crkveni Bok Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Croatian Veterinary Institute Sample ID given by the submitting laboratory: Authors: Savić, Vladimir Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence HA A/mute swan/Croatia/102/2016 1732 EPI873619 NA A/mute swan/Croatia/102/2016 1430 EPI873621 Submitter information Submitter: Savić, Vladimir Submission Date: 2017-01-02 Last modifier: Savić, Vladimir Last modified: 2017-01-11 Address: Croatian Veterinary Institute Poultry Centre Heinzelova 55 10000 Zagreb Croatia Link to comment Share on other sites More sharing options...
niman Posted January 27, 2017 Author Report Share Posted January 27, 2017 Align Segment-ID Name Score E-Value Identity EPI873619 A/mute swan/Croatia/102/2016 (A/H5N5) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI888600 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1685/1705 (98%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3027.8 0.000000e+00 1682/1704 (98%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3022.2 0.000000e+00 1681/1704 (98%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI869938 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3020.4 0.000000e+00 1681/1704 (98%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3016.7 0.000000e+00 1680/1704 (98%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3016.7 0.000000e+00 1680/1704 (98%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1668/1686 (98%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774361 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3014.9 0.000000e+00 1680/1704 (98%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1679/1704 (98%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1679/1704 (98%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1679/1704 (98%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1680/1705 (98%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1679/1704 (98%) EPI888088 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI860401 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI859653 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI774498 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI774426 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 4 (HA) 3003.8 0.000000e+00 1678/1704 (98%) EPI869928 A/chicken/Poland/85A/2016 (A/H5N8) segment 4 (HA) 2998.2 0.000000e+00 1677/1704 (98%) EPI863865 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 4 (HA) 2998.2 0.000000e+00 1677/1704 (98%) EPI861224 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 4 (HA) 2998.2 0.000000e+00 1677/1704 (98%) EPI774344 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 4 (HA) 2998.2 0.000000e+00 1677/1704 (98%) EPI703608 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 4 (HA) 2998.2 0.000000e+00 1677/1704 (98%) EPI873626 A/mute swan/Croatia/104/2016 (A/H5N8) segment 4 (HA) 2996.4 0.000000e+00 1674/1700 (98%) EPI861012 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 4 (HA) 2992.7 0.000000e+00 1676/1704 (98%) EPI860231 A/wild duck/Poland/82A/2016 (A/H5N8) segment 4 (HA) 2989.0 0.000000e+00 1675/1704 (98%) EPI861222 A/tufted duck/Germany-SN/R8795/2016 (A/H5N8) segment 4 (HA) 2985.3 0.000000e+00 1673/1704 (98%) EPI873212 A/chicken/Croatia/103/2016 (A/H5N8) segment 4 (HA) 2983.5 0.000000e+00 1673/1702 (98%) EPI863857 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI863849 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI863834 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI863826 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 4 (HA) 2981.6 0.000000e+00 1674/1704 (98%) EPI681300 A/goose/Zhejiang/925104/2014 (A/H5N8) segment 4 (HA) 2931.8 0.000000e+00 1665/1704 (97% Link to comment Share on other sites More sharing options...
niman Posted January 27, 2017 Author Report Share Posted January 27, 2017 Align Segment-ID Name Score E-Value Identity EPI873621 A/mute swan/Croatia/102/2016 (A/H5N5) segment 6 (NA) 2608.6 0.000000e+00 1412/1412 (100%) EPI888601 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 6 (NA) 2597.5 0.000000e+00 1410/1412 (99%) EPI680489 A/common redshank/Singapore/F83-2/2015(H9N5) (A/H9N5) segment 6 (NA) 2497.8 0.000000e+00 1392/1412 (98%) EPI680487 A/common redshank/Singapore/F83-1/2015(H9N5) (A/H9N5) segment 6 (NA) 2497.8 0.000000e+00 1392/1412 (98%) EPI678380 A/common redshank/Singapore/F83-2/2015 (A/H9N5) segment 6 (NA) 2497.8 0.000000e+00 1392/1412 (98%) EPI678379 A/common redshank/Singapore/F83-1/2015 (A/H9N5) segment 6 (NA) 2497.8 0.000000e+00 1392/1412 (98%) EPI600154 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 6 (NA) 2447.9 0.000000e+00 1383/1412 (97%) EPI399897 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2370.4 0.000000e+00 1369/1412 (96%) EPI314739 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2370.4 0.000000e+00 1369/1412 (96%) EPI461090 A/duck/Guangxi/GXd-1/2009 (A/H6N5) segment 6 (NA) 2359.3 0.000000e+00 1367/1412 (96%) EPI268287 A/duck/Hunan/5613/2003 (A/H6N5) segment 6 (NA) 2298.4 0.000000e+00 1356/1412 (96%) EPI600798 A/migratory duck/Jiangxi/7231/2003 (A/H10N5) segment 6 (NA) 2287.3 0.000000e+00 1354/1412 (95%) EPI600792 A/migratory duck/Jiangxi/6847/2003 (A/H10N5) segment 6 (NA) 2270.7 0.000000e+00 1351/1412 (95%) EPI618625 A/mallard/Sweden/343/2002 (A/H12N5) segment 6 (NA) 2243.0 0.000000e+00 1346/1412 (95%) EPI377768 A/mallard/Sweden/30/2002 (A/H2N5) segment 6 (NA) 2237.4 0.000000e+00 1345/1412 (95%) EPI296546 A/Bewicks swan/Netherlands/1/2007 (A/H1N5) segment 6 (NA) 2209.7 0.000000e+00 1340/1412 (94%) EPI190186 A/mallard/Switzerland/WV4060167/2006 (A/H3N5) segment 6 (NA) 2209.7 0.000000e+00 1340/1412 (94%) EPI618665 A/mallard/Sweden/2213/2003 (A/H12N5) segment 6 (NA) 2204.2 0.000000e+00 1339/1412 (94%) EPI618645 A/mallard/Sweden/69794/2007 (A/H12N5) segment 6 (NA) 2204.2 0.000000e+00 1340/1413 (94%) EPI618630 A/mallard/Sweden/68529/2007 (A/H12N5) segment 6 (NA) 2204.2 0.000000e+00 1340/1413 (94%) EPI514607 A/mallard/Sweden/50709/2006 (A/H4N5) segment 6 (NA) 2204.2 0.000000e+00 1339/1412 (94%) EPI251818 A/mallard/Sweden/86/2003 (A/H12N5) segment 6 (NA) 2204.2 0.000000e+00 1339/1412 (94%) EPI618616 A/mallard/Sweden/60069/2007 (A/H12N5) segment 6 (NA) 2198.6 0.000000e+00 1339/1413 (94%) EPI618602 A/mallard/Sweden/50968/2006 (A/H12N5) segment 6 (NA) 2182.0 0.000000e+00 1335/1412 (94%) EPI296562 A/black-headed gull/Netherlands/1/2006 (A/H4N5) segment 6 (NA) 2182.0 0.000000e+00 1335/1412 (94%) EPI760593 A/wigeon/Italy/6127-23/2007 (A/H6N5) segment 6 (NA) 2176.5 0.000000e+00 1334/1412 (94%) EPI618810 A/mallard/Sweden/69773/2007 (A/H10N5) segment 6 (NA) 2176.5 0.000000e+00 1335/1413 (94%) EPI618769 A/mallard/Sweden/69792/2007 (A/H10N5) segment 6 (NA) 2176.5 0.000000e+00 1335/1413 (94%) EPI463356 A/mallard/Sweden/100127/2009 (A/H12N5) segment 6 (NA) 2170.9 0.000000e+00 1334/1413 (94%) EPI463355 A/mallard/Sweden/100117/2009 (A/H12N5) segment 6 (NA) 2170.9 0.000000e+00 1334/1413 (94%) EPI463353 A/mallard/Sweden/100103/2009 (A/H12N5) segment 6 (NA) 2170.9 0.000000e+00 1334/1413 (94%) EPI251663 A/mallard/Netherlands/2/1999 (A/H3N5) segment 6 (NA) 2170.9 0.000000e+00 1334/1413 (94%) EPI345387 A/Arenaria interpres/Belgium/02936pcs1/2010 (A/H12N5) segment 6 (NA) 2154.3 0.000000e+00 1331/1413 (94%) EPI476025 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 6 (NA) 2148.8 0.000000e+00 1330/1413 (94%) EPI295953 A/duck/Yangzhou/013/2008 (A/H6N5) segment 6 (NA) 2148.8 0.000000e+00 1329/1412 (94%) EPI174859 A/mallard/Denmark/77-64590-5/2005 (A/H7N5) segment 6 (NA) 2148.8 0.000000e+00 1325/1405 (94%) EPI397609 A/sentinel mallard/Germany/sum156/2007 (A/H6N5) segment 6 (NA) 2143.2 0.000000e+00 1329/1413 (94%) EPI259429 A/duck/Hokkaido/111/2009 (A/H1N5) segment 6 (NA) 2143.2 0.000000e+00 1328/1412 (94%) EPI476092 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 6 (NA) 2137.7 0.000000e+00 1328/1413 (93%) EPI476074 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 6 (NA) 2137.7 0.000000e+00 1328/1413 (93%) EPI328876 A/duck/Eastern China/031/2009 (A/H5N5) segment 6 (NA) 2137.7 0.000000e+00 1328/1413 (93%) EPI328868 A/duck/Eastern China/008/2008 (A/H5N5) segment 6 (NA) 2137.7 0.000000e+00 1327/1412 (93%) EPI160652 A/duck/Hokkaido/24/04 (A/H10N5) segment 6 (NA) 2137.7 0.000000e+00 1329/1414 (93%) EPI160651 A/duck/Mongolia/149/03 (A/H10N5) segment 6 (NA) 2137.7 0.000000e+00 1329/1414 (93%) EPI1871 A/duck/Hokkaido/1058/01 (A/H4N5) segment 6 (NA) 2132.2 0.000000e+00 1328/1414 (93%) EPI476059 A/black-headed gull/Iceland/1298/2011 (A/H10N5) segment 6 (NA) 2126.6 0.000000e+00 1327/1414 (93%) EPI181656 A/duck/Tsukuba/255/2005 (A/H8N5) segment 6 (NA) 2121.1 0.000000e+00 1327/1415 (93%) EPI363513 A/duck/Guizhou/888/2006 (A/H6N5) segment 6 (NA) 2115.5 0.000000e+00 1325/1414 (93%) EPI534745 A/mallard/Finland/10952/2008 (A/H4N5) segment 6 (NA) 2113.7 0.000000e+00 1320/1408 (93%) EPI357827 A/duck/Mongolia/OIE-7457/2011 (A/H3N5) segment 6 (NA) 2110.0 0.000000e+00 1323/1413 (93%) EPI268286 A/duck/Guangxi/1455/2004 (A/H6N5) segment 6 (NA) 2110.0 0.000000e+00 1324/1414 (93%) EPI1887 A/duck/Hokkaido/66/01 (A/H12N5) segment 6 (NA) 2110.0 0.000000e+00 1324/1414 (93%) EPI316866 A/mallard/Czech Republic/14924-1/2007 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1306/1389 (94%) EPI102207 A/duck/Taiwan/WB459/04 (A/H6N5) segment 6 (NA) 2104.5 0.000000e+00 1323/1414 (93%) EPI299316 A/avian/Japan/8KI0040/2008 (A/H3N5) segment 6 (NA) 2098.9 0.000000e+00 1323/1415 (93%) EPI442027 A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 6 (NA) 2093.4 0.000000e+00 1319/1412 (93%) EPI268283 A/duck/Guangxi/585/2005 (A/H6N5) segment 6 (NA) 2093.4 0.000000e+00 1321/1414 (93%) EPI493827 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 6 (NA) 2087.8 0.000000e+00 1319/1413 (93%) EPI493819 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 6 (NA) 2087.8 0.000000e+00 1319/1413 (93%) EPI338864 A/aquatic bird/Korea/W69/2005 (A/H6N5) segment 6 (NA) 2087.8 0.000000e+00 1320/1414 (93%) EPI299284 A/avian/Japan/8KI0135/2008 (A/H6N5) segment 6 (NA) 2087.8 0.000000e+00 1321/1415 (93%) EPI181654 A/duck/Tsukuba/11/2005 (A/H6N5) segment 6 (NA) 2087.8 0.000000e+00 1320/1414 (93%) EPI268285 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 6 (NA) 2082.3 0.000000e+00 1320/1415 (93%) EPI181655 A/duck/Shiga/69/2006 (A/H6N5) segment 6 (NA) 2082.3 0.000000e+00 1320/1415 (93%) EPI268284 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 6 (NA) 2076.8 0.000000e+00 1319/1415 (93%) EPI268282 A/duck/Hunan/748/2005 (A/H6N5) segment 6 (NA) 2076.8 0.000000e+00 1318/1414 (93%) EPI764880 A/duck/Bangladesh/18-C/2013 (A/H1N5) segment 6 (NA) 2071.2 0.000000e+00 1302/1392 (93%) EPI493835 A/duck/Guangdong/wy24/2008 (A/H5N5) segment 6 (NA) 2060.1 0.000000e+00 1314/1413 (92%) EPI764882 A/duck/Bangladesh/33-O/2013 (A/H2N5) segment 6 (NA) 2054.6 0.000000e+00 1300/1393 (93%) EPI618588 A/mallard/Sweden/3328/2003 (A/H12N5) segment 6 (NA) 2054.6 0.000000e+00 1312/1412 (92%) EPI182107 A/mallard/Netherlands/11/2007 (A/H6N5) segment 6 (NA) 2038.0 0.000000e+00 1312/1415 (92%) EPI442003 A/goose/Shandong/k1204/2009 (A/H5N5) segment 6 (NA) 2036.1 0.000000e+00 1287/1379 (93%) EPI408363 A/wild duck/Korea/SH12-7/2008 (A/H10N5) segment 6 (NA) 2032.4 0.000000e+00 1310/1414 (92%) EPI221527 A/Anas plathyrhynchos/Spain/1252/2007 (A/H6N5) segment 6 (NA) 2032.4 0.000000e+00 1311/1415 (92%) EPI454768 A/ruddy turnstone/Delaware/AI03-162/2003 (A/H0) segment 6 (NA) 2026.9 0.000000e+00 1310/1415 (92%) EPI454761 A/ruddy turnstone/Delaware/AI03-165/2003 (A/H9N5) segment 6 (NA) 2026.9 0.000000e+00 1310/1415 (92%) EPI343733 A/shorebird/Delaware Bay/246/2003 (A/H9N5) segment 6 (NA) 2021.4 0.000000e+00 1309/1415 (92%) EPI574266 A/mule duck/Bulgaria/674/2010 (A/H6N5) segment 6 (NA) 2015.8 0.000000e+00 1309/1416 (92%) EPI454689 A/ruddy turnstone/Delaware/AI03-193/2003 (A/H9N5) segment 6 (NA) 2015.8 0.000000e+00 1309/1416 (92%) EPI617866 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 6 (NA) 2010.3 0.000000e+00 1310/1418 (92%) EPI315149 A/duck/Vietnam/G18/2009 (A/H12N5) segment 6 (NA) 1999.2 0.000000e+00 1306/1416 (92%) EPI399888 A/duck/HuBei/03/2010 (A/H5N5) segment 6 (NA) 1938.3 0.000000e+00 1294/1415 (91%) EPI395082 A/swine/Hubei/10/2008 (A/H10N5) segment 6 (NA) 1938.3 0.000000e+00 1293/1414 (91%) EPI816852 A/chinstrap penguin/Antarctica/B04/2015 (A/H5N5) segment 6 (NA) 1927.2 0.000000e+00 1292/1415 (91%) EPI316499 A/chicken/Hubei/119/1983 (A/H10N5) segment 6 (NA) 1927.2 0.000000e+00 1292/1415 (91%) EPI534755 A/mallard/Finland/13016/2008 (A/H12N5) segment 6 (NA) 1916.1 0.000000e+00 1202/1284 (93%) EPI704456 A/duck/Hong Kong/934/1980 (A/H10N5) segment 6 (NA) 1905.0 0.000000e+00 1288/1415 (91%) EPI407981 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1905.0 0.000000e+00 1287/1414 (91%) EPI3007 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1905.0 0.000000e+00 1287/1414 (91%) EPI774536 A/Chinstrap penguin/Antarctica/15459/2015 (A/H5N5) segment 6 (NA) 1899.5 0.000000e+00 1280/1404 (91%) EPI442011 A/goose/Guangdong/k0103/2010 (A/H5N5) segment 6 (NA) 1893.9 0.000000e+00 1285/1414 (90%) EPI290489 A/common murre/Oregon/19497-004/2005 (A/H9N5) segment 6 (NA) 1821.9 0.000000e+00 1274/1416 (89%) EPI418314 A/duck/Vietnam/OIE-707/2011 (A/H11N5) segment 6 (NA) 1814.5 0.000000e+00 1259/1395 (90%) EPI184639 A/mallard/Gurjev/263/1982 (A/H14N5) segment 6 (NA) 1786.8 0.000000e+00 1224/1351 (90%) EPI407910 A/shearwater/Australia/1/1973 (A/H6N5) segment 6 (NA) 1500.6 0.000000e+00 1225/1423 (86%) EPI242559 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1500.6 0.000000e+00 1225/1423 (86%) EPI42204 A/shearwater/Australia/1/1973 (A/H6N5) segment 6 (NA) 1500.6 0.000000e+00 1225/1423 (86%) EPI1891 A/chicken/Taiwan/4801/90 (A/H6N5) segment 6 (NA) 1491.4 0.000000e+00 1223/1423 (85%) EPI243128 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1484.0 0.000000e+00 1221/1422 (85%) EPI243127 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1478.4 0.000000e+00 1222/1424 (85%) Link to comment Share on other sites More sharing options...
niman Posted January 27, 2017 Author Report Share Posted January 27, 2017 H5N5 map update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=1sCuerlmBTcpi1QLzYCES_Nkv-nw&ll=44.84461253959618%2C14.73848172500152&z=7 Link to comment Share on other sites More sharing options...
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