niman Posted March 10, 2017 Report Share Posted March 10, 2017 (edited) H5 from 2017 H5N8 sequences from a mallard and chicken in South Korea match H5N8 H5 in Europe, Edited March 10, 2017 by niman Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Isolate detail Isolate name: A/mallard duck/Korea/WA137/2017 Isolate ID: EPI_ISL_254745 Passage details/history: c1 Type: A / H5N8 Lineage: Sample information Collection date: 2017-01-24 Host Anas platyrhynchos Additional host information: Domestic status: Wild Is vaccinated: Location: Korea, Republic of / Chungcheongnam-do Additional location information: Health status: Specimen source: Strain or commercial product name used for vaccination: Institute information Originating lab: Avian disease division, Animal and Plant Quarantine Agency Sample ID given by the sample provider: Address: Avian disease division, Animal and Plant Quarantine Agency Hyeoksin 8-ro 39660 Gimchen-si Korea, Republic of Submitting lab: Animal and Plant Quarantine Agency (QIA) Sample ID given by the submitting laboratory: Authors: Youn-Jeong, Lee; Eun-Kyoung, Lee; Byung-Min, Song; Yu-Na, Lee Address: Animal and Plant Quarantine Agency (QIA) Anyangro 175 Anynagsi Korea, Republic of Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/mallard duck/Korea/WA137/2017 2308 EPI952757 PB1 A/mallard duck/Korea/WA137/2017 2284 EPI952760 PA A/mallard duck/Korea/WA137/2017 2200 EPI952769 HA A/mallard duck/Korea/WA137/2017 1776 EPI952782 NP A/mallard duck/Korea/WA137/2017 1529 EPI952791 NA A/mallard duck/Korea/WA137/2017 1424 EPI952799 MP A/mallard duck/Korea/WA137/2017 1012 EPI952800 NS A/mallard duck/Korea/WA137/2017 855 EPI952801 Submitter information Submitter: Lee, Youn-Jeong Submission Date: 2017-03-10 Last modifier: Lee, Youn-Jeong Last modified: 2017-03-10 Address: Animal and Plant Quarantine Agency (QIA) Anyangro 175 Anynagsi Korea, Republic of Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Descriptions Align Segment-ID Name Score E-Value Identity EPI952782 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI952639 A/chicken/Korea/H903/2017 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1695/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3094.3 0.000000e+00 1694/1704 (99%) EPI916604 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1693/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3086.9 0.000000e+00 1694/1705 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3081.3 0.000000e+00 1692/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3077.6 0.000000e+00 1691/1704 (99%) EPI943320 A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI930838 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI919636 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1692/1705 (99%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%) EPI942943 A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI930843 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI931194 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI931145 A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI931110 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI888088 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1690/1705 (99%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1688/1704 (99%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3061.0 0.000000e+00 1676/1686 (99%) EPI916503 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI942935 A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI917480 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI909404 A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI909396 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI909388 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI909380 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI869927 A/chicken/Poland/79A/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI860509 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952799 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%) EPI952641 A/chicken/Korea/H903/2017 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%) EPI858846 A/painted stork/India/10CA03/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774296 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%) EPI774500 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774468 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774452 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774444 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774436 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774420 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774412 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774404 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774388 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774380 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774371 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774363 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774346 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774337 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774320 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774312 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774304 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774288 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774270 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774261 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774253 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774244 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774195 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774187 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774144 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774136 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI774115 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 6 (NA) 2564.3 0.000000e+00 1400/1406 (99%) EPI836616 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI836608 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI823758 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI823750 A/wild duck/Tyva/35/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI823462 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774492 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774484 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774477 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1400/1407 (99%) EPI774460 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1400/1407 (99%) EPI774396 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1397/1403 (99%) EPI774354 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774328 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774279 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1397/1403 (99%) EPI774178 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774170 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774161 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%) EPI774508 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774428 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774220 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI774212 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1396/1403 (99%) EPI774152 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1399/1407 (99%) EPI773759 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%) EPI909430 A/turkey/Rostov/11/2017 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI861569 A/mute swan/Croatia/70/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI774236 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1398/1407 (99%) EPI774203 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%) EPI942937 A/turkey/England/003778/2017 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI909454 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869939 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869935 A/mute swan/Poland/108/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869933 A/chicken/Poland/79A/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869811 A/duck/France/161108h/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI869689 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%) EPI774228 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1397/1407 (99%) EPI942945 A/chicken/Wales/000023/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1396/1407 (99%) EPI931111 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI916386 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI909462 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI909446 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI909438 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI909406 A/chicken/Voronezh/18/2017 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI909398 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI888278 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI881900 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI864747 A/mute swan/Croatia/85/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI861573 A/mute swan/Croatia/78/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI858838 A/duck/India/10CA01/2016 (A/H5N8) segment 6 (NA) 2536.6 0.000000e+00 1395/1406 (99%) EPI917481 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1394/1406 (99%) EPI919637 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI916504 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI909422 A/chicken/Voronezh/20/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI909414 A/chicken/Voronezh/19/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI909390 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI909382 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI887470 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI881902 A/mute swan/Croatia/15/2017 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI873213 A/chicken/Croatia/103/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI869934 A/chicken/Poland/85A/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI868850 A/turkey/England/052131/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1395/1407 (99%) EPI861014 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI861010 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI860510 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI860403 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI860395 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI860232 A/wild duck/Poland/82A/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI859655 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 6 (NA) 2531.0 0.000000e+00 1394/1406 (99%) EPI909366 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 6 (NA) 2529.2 0.000000e+00 1393/1406 (99%) EPI931195 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) EPI859649 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 6 (NA) 2527.3 0.000000e+00 1393/1406 (99%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952800 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI952642 A/chicken/Korea/H903/2017 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI931201 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 7 (MP) 1779.4 0.000000e+00 975/981 (99%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 972/981 (99%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 972/981 (99%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 972/981 (99%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1762.8 0.000000e+00 972/981 (99%) EPI942946 A/chicken/Wales/000023/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI931196 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI930842 A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI919638 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI917482 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI916524 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI916387 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1757.3 0.000000e+00 971/981 (98%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1755.4 0.000000e+00 970/981 (98%) EPI942938 A/turkey/England/003778/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 969/979 (98%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 969/979 (98%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 970/981 (98%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1751.7 0.000000e+00 968/978 (98%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 970/982 (98%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 970/982 (98%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1749.9 0.000000e+00 970/982 (98%) EPI916606 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 969/981 (98%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%) EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI909415 A/chicken/Voronezh/19/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI909407 A/chicken/Voronezh/18/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI909399 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI909391 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI909383 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI774470 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952757 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI952636 A/chicken/Korea/H903/2017 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2269/2281 (99%) EPI858841 A/painted stork/India/10CA03/2016 (A/H5N8) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI773754 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 1 (PB2) 4122.8 0.000000e+00 2264/2280 (99%) EPI774315 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%) EPI774198 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%) EPI836611 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI823745 A/wild duck/Tyva/35/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774495 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774455 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774447 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774439 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774349 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774332 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774323 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774274 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774215 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774207 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774190 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI774127 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%) EPI858833 A/duck/India/10CA01/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI836603 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI823753 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774487 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774480 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774431 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774416 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774407 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774399 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774375 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774366 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774358 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774341 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774291 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774264 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774248 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI774139 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 1 (PB2) 4089.6 0.000000e+00 2258/2280 (99%) EPI823457 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774463 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774423 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774307 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774299 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774283 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774256 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774239 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774231 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774223 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774173 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774110 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%) EPI774503 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774472 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774383 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774182 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774147 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774118 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%) EPI774391 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI774165 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 1 (PB2) 4073.0 0.000000e+00 2256/2281 (98%) EPI774156 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI909465 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%) EPI704256 A/duck/Mongolia/30/2015 (A/H3N8) segment 1 (PB2) 3967.7 0.000000e+00 2237/2281 (98%) EPI704541 A/duck/Mongolia/742/2015 (A/H10N7) segment 1 (PB2) 3962.2 0.000000e+00 2236/2281 (98%) EPI704419 A/duck/Mongolia/655/2015 (A/H2N3) segment 1 (PB2) 3962.2 0.000000e+00 2236/2281 (98%) EPI704280 A/duck/Mongolia/118/2015 (A/H4N6) segment 1 (PB2) 3962.2 0.000000e+00 2236/2281 (98%) EPI704385 A/duck/Mongolia/482/2015 (A/H2N3) segment 1 (PB2) 3956.6 0.000000e+00 2235/2281 (97%) EPI704403 A/duck/Mongolia/521/2015 (A/H3N8) segment 1 (PB2) 3923.4 0.000000e+00 2229/2281 (97%) EPI469157 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 1 (PB2) 3895.7 0.000000e+00 2224/2281 (97%) EPI806627 A/duck/Zhejiang/6D10/2013 (A/H2N8) segment 1 (PB2) 3873.5 0.000000e+00 2222/2283 (97%) EPI823896 A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 1 (PB2) 3868.0 0.000000e+00 2219/2281 (97%) EPI617754 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 1 (PB2) 3851.4 0.000000e+00 2216/2281 (97%) EPI704288 A/duck/Mongolia/127/2015 (A/H4N6) segment 1 (PB2) 3845.8 0.000000e+00 2216/2282 (97%) EPI704264 A/duck/Mongolia/101/2015 (A/H4N6) segment 1 (PB2) 3845.8 0.000000e+00 2216/2282 (97%) EPI683169 A/wild bird/Wuhan/CDHN15/2015 (A/H6N2) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI683168 A/wild bird/Wuhan/CDHN09/2015 (A/H6N2) segment 1 (PB2) 3845.8 0.000000e+00 2215/2281 (97%) EPI704394 A/duck/Mongolia/520/2015 (A/H1N1) segment 1 (PB2) 3829.2 0.000000e+00 2213/2282 (96%) EPI909433 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 1 (PB2) 3823.7 0.000000e+00 2211/2281 (96%) EPI869684 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 1 (PB2) 3807.1 0.000000e+00 2209/2282 (96%) EPI845250 A/environment/Sichuan/315068/2015 (A/H6N2) segment 1 (PB2) 3807.1 0.000000e+00 2208/2281 (96%) EPI692341 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 1 (PB2) 3807.1 0.000000e+00 2208/2281 (96%) EPI692333 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 1 (PB2) 3807.1 0.000000e+00 2208/2281 (96%) EPI909457 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI909449 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI845251 A/environment/Sichuan/315069/2015 (A/H6N2) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI584398 A/duck/Hunan/S3137/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI527588 A/velvet scoter/Mongolia/879V/2009 (A/H10N8) segment 1 (PB2) 3801.5 0.000000e+00 2207/2281 (96%) EPI335395 A/aquatic bird/Korea/CN9/2009 (A/H6N8) segment 1 (PB2) 3801.5 0.000000e+00 2208/2282 (96%) EPI863854 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 1 (PB2) 3797.8 0.000000e+00 2206/2281 (96%) EPI909417 A/chicken/Voronezh/20/2017 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI909409 A/chicken/Voronezh/19/2017 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI909401 A/chicken/Voronezh/18/2017 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI909385 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI909377 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2207/2282 (96%) EPI881279 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI869942 A/herring gull/Poland/84/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI863846 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI863831 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI863823 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI860399 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI860233 A/wild duck/Poland/82A/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI859660 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) EPI527576 A/surf scooter/Mongolia/878V/2009 (A/H10N8) segment 1 (PB2) 3796.0 0.000000e+00 2206/2281 (96%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952760 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI952637 A/chicken/Korea/H903/2017 (A/H5N8) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI858842 A/painted stork/India/10CA03/2016 (A/H5N8) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI773755 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 2 (PB1) 4128.4 0.000000e+00 2261/2274 (99%) EPI774488 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774481 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774408 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774400 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774376 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774367 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774292 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774284 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774275 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774265 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774224 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774216 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774208 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 2 (PB1) 4111.8 0.000000e+00 2258/2274 (99%) EPI774496 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774424 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774417 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774359 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774350 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774333 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774324 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774316 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774257 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774249 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI774199 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%) EPI909458 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI909450 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI774342 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI909466 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI860398 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI859659 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI836612 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774448 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774440 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774432 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2256/2275 (99%) EPI774191 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774140 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI774129 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 2 (PB1) 4095.1 0.000000e+00 2255/2274 (99%) EPI869807 A/duck/France/161108h/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI860495 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI860390 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI860234 A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI836604 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774456 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774240 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774232 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774183 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774174 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774157 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774119 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI774111 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI909362 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI881281 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI881276 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI863863 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774473 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774464 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774392 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774384 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774300 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774166 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI774148 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 2 (PB1) 4084.1 0.000000e+00 2253/2274 (99%) EPI869084 A/mute swan/Croatia/70/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2250/2271 (99%) EPI782721 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI774308 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI868846 A/turkey/England/052131/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI858834 A/duck/India/10CA01/2016 (A/H5N8) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI863855 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 2 (PB1) 4069.3 0.000000e+00 2250/2274 (98%) EPI909442 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI909426 A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI863832 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 2 (PB1) 4065.6 0.000000e+00 2249/2274 (98%) EPI863824 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 2 (PB1) 4065.6 0.000000e+00 2249/2274 (98%) EPI869685 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1) 4063.7 0.000000e+00 2249/2274 (98%) EPI942941 A/chicken/Wales/000023/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI863847 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 2 (PB1) 4061.9 0.000000e+00 2248/2274 (98%) EPI909418 A/chicken/Voronezh/20/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909410 A/chicken/Voronezh/19/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909402 A/chicken/Voronezh/18/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909394 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909386 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI909378 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI942933 A/turkey/England/003778/2017 (A/H5N8) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI823754 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 2 (PB1) 4049.0 0.000000e+00 2246/2275 (98%) EPI909434 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI869943 A/herring gull/Poland/84/2016 (A/H5N8) segment 2 (PB1) 4001.0 0.000000e+00 2208/2229 (99%) EPI888086 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 2 (PB1) 3958.5 0.000000e+00 2183/2203 (99%) EPI692342 A/chicken/Hunan/S1267/2010 (A/H4N6) segment 2 (PB1) 3912.3 0.000000e+00 2222/2274 (97%) EPI692334 A/chicken/Hunan/S1248/2010 (A/H4N6) segment 2 (PB1) 3906.8 0.000000e+00 2221/2274 (97%) EPI704338 A/duck/Mongolia/179/2015 (A/H3N8) segment 2 (PB1) 3884.6 0.000000e+00 2218/2275 (97%) EPI540205 A/environment/Bangladesh/1002/2010 (A/H11N3) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%) EPI540189 A/duck/Bangladesh/1729/2010 (A/H11N3) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI513368 A/mallard/Sweden/101900/2009 (A/H4N3) segment 2 (PB1) 3873.5 0.000000e+00 2215/2274 (97%) EPI599808 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI540181 A/duck/Bangladesh/1728/2010 (A/H11N3) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%) EPI823913 A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 2 (PB1) 3862.5 0.000000e+00 2214/2275 (97%) EPI600850 A/duck/Jiangxi/22960/2008 (A/H10N8) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) EPI540173 A/duck/Bangladesh/1727/2010 (A/H11N3) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952769 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI952638 A/chicken/Korea/H903/2017 (A/H5N8) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI858843 A/painted stork/India/10CA03/2016 (A/H5N8) segment 3 (PA) 3928.9 0.000000e+00 2143/2151 (99%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI363454 A/duck/Guangxi/1074/2006 (A/H6N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI118321 A/duck/Jiang Xi/1850/2005 (A/H5N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI296257 A/wild duck/Korea/CSM38/2004 (A/H1N1) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI268977 A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI262643 A/aquatic bird/Korea/w79/2005 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI118289 A/duck/Jiang Xi/1286/2005 (A/H5N2) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262644 A/aquatic bird/Korea/w81/2005 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI262642 A/aquatic bird/Korea/w74/2005 (A/H5N2) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI140261 A/migratory duck/Jiang Xi/6568/2004 (A/H4N6) segment 3 (PA) 3685.2 0.000000e+00 2099/2151 (97%) EPI890596 A/greater white-fronted goose/Netherlands/1/2012 (A/H1N1) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3679.6 0.000000e+00 2099/2152 (97%) EPI268817 A/duck/Hunan/177/2005 (A/H6N1) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI262641 A/aquatic bird/Korea/w54/2005 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI118337 A/duck/Jiang Xi/3345/2005 (A/H5N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI749127 A/environment/Chongqing/02412/2012 (A/H5N1) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI387412 A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI363534 A/duck/Guizhou/2773/2006 (A/H6N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI326817 A/environment/Korea/CSM05/2004 (A/H3N1) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI296253 A/wild duck/Korea/CW09/2005 (A/H1N1) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI268960 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%) EPI837836 A/environment/Korea/W267/2007 (A/H7N4) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI717886 A/environment/Hubei-Jinzhou/02/2010 (A/H6N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI599172 A/migratory duck/Jiangxi/21248/2009 (A/H10N8) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI538470 A/common shelduck/Mongolia/2187/2011 (A/H5N3) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI538433 A/wild bird/Mongolia/2066/2011 (A/H5N3) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI387502 A/canvasback/Mongolia/2-69/2007 (A/H10) segment 3 (PA) 3668.6 0.000000e+00 2094/2148 (97%) EPI360053 A/duck/Suphanburi/AI157/2005 (A/H6N1) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI345928 A/whistling swan/Shimane/580/2002 (A/H5N3) segment 3 (PA) 3668.6 0.000000e+00 2097/2152 (97%) EPI307313 A/aquatic bird/Korea/MA81/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI307311 A/mallard duck/Korea/6L/2007 (A/H7N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI262663 A/aquatic bird/Korea/w222/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI258967 A/aquatic bird/Korea/w164/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI258966 A/aquatic bird/Korea/w163/2007 (A/H5N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI131894 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI69246 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI891127 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI889396 A/mallard duck/Netherlands/1/2014 (A/H10N7) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI774513 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI687186 A/chicken/Scotland/532/2016 (A/H5N1) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI540395 A/duck/Bangladesh/1293/2008 (A/H6N1) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI335409 A/aquatic bird/Korea/CN17/2009 (A/H6N2) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI268979 A/duck/Hunan/3748/2004 (A/H6N8) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI268962 A/duck/Guangxi/1455/2004 (A/H6N5) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%) EPI614294 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI540323 A/duck/Bangladesh/1575/2009 (A/H3N8) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI540315 A/duck/Bangladesh/1576/2009 (A/H3N8) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI540307 A/duck/Bangladesh/1574/2009 (A/H3N8) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI363890 A/duck/Guangxi/1330/2007 (A/H6N8) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI363882 A/duck/Guangxi/890/2007 (A/H6N8) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI307308 A/aquatic bird/Korea/w44/2005 (A/H7N3) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI268961 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI262667 A/aquatic bird/Korea/w234/2007 (A/H5N2) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI262666 A/aquatic bird/Korea/w231/2007 (A/H5N2) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI258965 A/aquatic bird/Korea/w161/2007 (A/H5N2) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI244497 A/mallard/Korea/GH170/2007 (A/H7N7) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%) EPI387406 A/whooper swan/Mongolia/1-25/2007 (A/H3N8) segment 3 (PA) 3655.6 0.000000e+00 2091/2147 (97%) EPI599169 A/migratory duck/Jiangxi/593/2005 (A/H10N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI361728 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 3 (PA) 3651.9 0.000000e+00 2091/2148 (97%) EPI307312 A/aquatic bird/Korea/MA44/2007 (A/H7N3) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI268981 A/duck/Hunan/1469/2002 (A/H6N8) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI262658 A/aquatic bird/Korea/w211/2007 (A/H5N2) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI262657 A/aquatic bird/Korea/w208/2007 (A/H5N2) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI230012 A/red crested pochard/Mongolia/1915/2006 (A/H3N6) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI182382 A/Baikal Teal/Hongze/14/2005 (A/H11N9) segment 3 (PA) 3651.9 0.000000e+00 2093/2151 (97%) EPI692375 A/duck/Chongqing/S2086/2012 (A/H4N8) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI599168 A/duck/Jiangxi/2039/2005 (A/H10N8) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI540291 A/duck/Bangladesh/1798/2010 (A/H3N6) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI487606 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI401299 A/wild duck/Korea/CSM20-5/2009 (A/H4N6) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI268958 A/duck/Hunan/748/2005 (A/H6N5) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI262660 A/aquatic bird/Korea/w217/2007 (A/H5N2) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI262656 A/aquatic bird/Korea/w206/2007 (A/H5N2) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI244544 A/mallard/Korea/GH171/2007 (A/H7N7) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI244507 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI180351 A/duck/Primorie/2621/01 (A/H5N2) segment 3 (PA) 3646.4 0.000000e+00 2094/2153 (97%) EPI262654 A/aquatic bird/Korea/w204/2007 (A/H5N2) segment 3 (PA) 3642.7 0.000000e+00 2091/2151 (97%) EPI837826 A/environment/Korea/W109/2006 (A/H7N7) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI774986 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI599149 A/migratory duck/Jiangxi/9334/2005 (A/H10N6) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568314 A/duck/Jiangxi/501/2006 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568311 A/duck/Jiangxi/468/2006 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568308 A/duck/Jiangxi/422/2006 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568305 A/duck/Jiangxi/386/2006 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568267 A/duck/Jiangxi/302/2006 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) EPI568264 A/duck/Jiangxi/13946/2005 (A/H10N3) segment 3 (PA) 3640.9 0.000000e+00 2091/2151 (97%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952791 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI952640 A/chicken/Korea/H903/2017 (A/H5N8) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI718527 A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 5 (NP) 2599.4 0.000000e+00 1467/1497 (97%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2588.3 0.000000e+00 1465/1497 (97%) EPI858845 A/painted stork/India/10CA03/2016 (A/H5N8) segment 5 (NP) 2566.1 0.000000e+00 1461/1497 (97%) EPI809357 A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 5 (NP) 2538.4 0.000000e+00 1457/1498 (97%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2538.4 0.000000e+00 1456/1497 (97%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2520.0 0.000000e+00 1452/1496 (97%) EPI942171 A/duck/Ganzhou/GZ5/2015 (A/H4N6) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2510.7 0.000000e+00 1451/1497 (96%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2508.9 0.000000e+00 1450/1496 (96%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2508.9 0.000000e+00 1450/1496 (96%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2507.0 0.000000e+00 1450/1497 (96%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2507.0 0.000000e+00 1450/1497 (96%) EPI809373 A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%) EPI774515 A/chicken/Netherlands/15007212/15 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774476 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774387 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774311 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774303 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774260 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774186 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774169 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774160 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774122 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI774114 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%) EPI891012 A/turnstone/Netherlands/1/2010 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI889592 A/mallard duck/Netherlands/78/2006 (A/H6N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774507 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774467 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774395 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI774252 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774243 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774177 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI774151 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI704308 A/duck/Mongolia/154/2015 (A/H0N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI693715 A/duck/Mongolia/66/2015 (A/H10N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI315101 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI618599 A/mallard/Sweden/107688/2009 (A/H10N1) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%) EPI889556 A/greater white-fronted goose/Netherlands/9/2009 (A/H6N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI889265 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774499 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774491 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774459 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774435 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774419 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774411 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774379 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774370 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774345 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774319 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774227 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774219 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774211 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774194 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI774143 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI664214 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI617983 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%) EPI470437 A/common teal/Hong Kong/MPM1670/2011 (A/H7N7) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI470415 A/duck/Yunnan/87/2007 (A/H7N6) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) EPI372497 A/mallard/Ukraine/05842-NAMRU3/2006 (A/H3N8) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%) Link to comment Share on other sites More sharing options...
niman Posted March 10, 2017 Author Report Share Posted March 10, 2017 Align Segment-ID Name Score E-Value Identity EPI952801 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 829/829 (100%) EPI952643 A/chicken/Korea/H903/2017 (A/H5N8) segment 8 (NS) 1526.5 0.000000e+00 828/829 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 826/830 (99%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 822/830 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 822/830 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 822/830 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1487.7 0.000000e+00 822/830 (99%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 821/830 (98%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1482.1 0.000000e+00 821/830 (98%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1476.6 0.000000e+00 816/824 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 819/830 (98%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1471.1 0.000000e+00 815/824 (98%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 818/830 (98%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1465.5 0.000000e+00 814/824 (98%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 817/830 (98%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1460.0 0.000000e+00 813/824 (98%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1456.3 0.000000e+00 811/822 (98%) EPI942939 A/turkey/England/003778/2017 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 816/830 (98%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 810/821 (98%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 810/821 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 812/824 (98%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1454.4 0.000000e+00 812/824 (98%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1450.7 0.000000e+00 812/825 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1448.9 0.000000e+00 816/831 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1447.0 0.000000e+00 809/824 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 808/821 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 808/821 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 808/821 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1443.4 0.000000e+00 808/821 (98%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 802/813 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 807/821 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1439.7 0.000000e+00 809/823 (98%) EPI690804 A/goose/Shandong/WFSG1/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 814/831 (97%) EPI690796 A/goose/Jiangsu/QD5/2014 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 814/831 (97%) EPI530993 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 813/831 (97%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1428.6 0.000000e+00 807/823 (98%) EPI703682 A/duck/Eastern China/S0215/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 807/825 (97%) Link to comment Share on other sites More sharing options...
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