niman Posted March 17, 2017 Report Posted March 17, 2017 National Veterinary Research Institut Poland has release sequences for all 8 gene segments from 2017 H5N5 isolate from a mute swan.
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Isolate name: A/mute swan/Poland/64/2017 Isolate ID: EPI_ISL_255917 Passage details/history: organ Type: A / H5N5 Lineage: Sample information Collection date: 2017-01-31 Host Cygnus olor Additional host information: Domestic status: Wild Is vaccinated: Location: Poland / Lower Silesian Voivodeship Additional location information: Health status: Dead Specimen source: Organ Strain or commercial product name used for vaccination: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: National Veterinary Research Institut Poland, PIWet-PIB Sample ID given by the submitting laboratory: Authors: Swieton E., Smietanka K. Address: National Veterinary Research Institut Poland, PIWet-PIB Al. Partyzantow 57 24-100 Pulawy Poland Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/mute swan/Poland/64/2017 2308 EPI959442 PB1 A/mute swan/Poland/64/2017 2274 EPI959441 PA A/mute swan/Poland/64/2017 2151 EPI959440 HA A/mute swan/Poland/64/2017 1704 EPI959444 NP A/mute swan/Poland/64/2017 1478 EPI959438 NA A/mute swan/Poland/64/2017 1395 EPI959443 MP A/mute swan/Poland/64/2017 753 EPI959437 NS A/mute swan/Poland/64/2017 794 EPI959439 Submitter information Submitter: Świętoń, Edyta Submission Date: 2017-03-17 Last modifier: Świętoń, Edyta Last modified: 2017-03-17 Address: National Veterinary Research Institut Poland, PIWet-PIB Al. Partyzantow 57 24-100 Pulawy Poland
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI931200 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI888600 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 4 (HA) 3142.3 0.000000e+00 1703/1704 (99%) EPI873619 A/mute swan/Croatia/102/2016 (A/H5N5) segment 4 (HA) 3125.7 0.000000e+00 1700/1704 (99%) EPI869931 A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA) 3070.3 0.000000e+00 1690/1704 (99%) EPI869930 A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA) 3066.6 0.000000e+00 1689/1704 (99%) EPI916604 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3064.7 0.000000e+00 1689/1704 (99%) EPI909452 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI869936 A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836614 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI836606 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823756 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823748 A/wild duck/Tyva/35/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI823460 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1688/1704 (99%) EPI773757 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 4 (HA) 3059.2 0.000000e+00 1689/1705 (99%) EPI864746 A/mute swan/Croatia/85/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI861568 A/mute swan/Croatia/70/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI774185 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 4 (HA) 3053.6 0.000000e+00 1687/1704 (99%) EPI869924 A/domestic goose/Poland/33/2016 (A/H5N8) segment 4 (HA) 3049.9 0.000000e+00 1686/1704 (98%) EPI952639 A/chicken/Korea/H903/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI943320 A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI930838 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI919636 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI887468 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI881901 A/mute swan/Croatia/15/2017 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869929 A/mute swan/Poland/108/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI868848 A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI861572 A/mute swan/Croatia/78/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI858844 A/painted stork/India/10CA03/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774394 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774386 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774310 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774242 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774234 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774121 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI774113 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 4 (HA) 3048.1 0.000000e+00 1686/1704 (98%) EPI869926 A/domestic goose/Poland/72/2016 (A/H5N8) segment 4 (HA) 3044.4 0.000000e+00 1685/1704 (98%) EPI959435 A/chicken/Poland/002/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI952782 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI942943 A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI930843 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI925956 A/gadwall/Chany/97/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI873624 A/mute swan/Croatia/9/2017 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI869809 A/duck/France/161108h/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774475 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774458 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774450 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774402 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774378 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774326 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774318 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774302 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774277 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774267 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774259 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774251 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774226 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774218 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774210 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774201 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774193 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774176 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774168 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774159 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI774150 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 4 (HA) 3042.6 0.000000e+00 1685/1704 (98%) EPI888277 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI869687 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA) 3038.9 0.000000e+00 1684/1704 (98%) EPI931194 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931145 A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI931110 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909444 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI881899 A/breeder duck/Croatia/21/2017 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI869940 A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI861011 A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI859212 A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI858836 A/duck/India/10CA01/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774506 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774490 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774483 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774434 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774410 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774369 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774335 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774294 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774286 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774142 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI774133 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 4 (HA) 3037.0 0.000000e+00 1684/1704 (98%) EPI909364 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1683/1704 (98%) EPI873659 A/Eurasian wigeon/Netherlands/1/2016 (A/H5N8) segment 4 (HA) 3033.3 0.000000e+00 1671/1686 (99%) EPI916503 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI916385 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI909436 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI860393 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI859650 A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774466 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI774442 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1684/1705 (98%) EPI774352 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1683/1704 (98%) EPI959433 A/chicken/Poland/114/2016 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI942935 A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI917480 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%) EPI909428 A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA) 3025.9 0.000000e+00 1682/1704 (98%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI888601 A/wigeon/Italy/16VIR9616-3/2016 (A/H5N5) segment 6 (NA) 2555.0 0.000000e+00 1387/1389 (99%) EPI873621 A/mute swan/Croatia/102/2016 (A/H5N5) segment 6 (NA) 2544.0 0.000000e+00 1385/1389 (99%) EPI680489 A/common redshank/Singapore/F83-2/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI680487 A/common redshank/Singapore/F83-1/2015(H9N5) (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678380 A/common redshank/Singapore/F83-2/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI678379 A/common redshank/Singapore/F83-1/2015 (A/H9N5) segment 6 (NA) 2455.3 0.000000e+00 1369/1389 (98%) EPI940483 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 6 (NA) 2405.5 0.000000e+00 1304/1305 (99%) EPI600154 A/migratory duck/Jiangxi/31577/2013 (A/H10N5) segment 6 (NA) 2405.5 0.000000e+00 1360/1389 (97%) EPI399897 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI314739 A/aquatic bird/Korea/CN5/2009 (A/H6N5) segment 6 (NA) 2327.9 0.000000e+00 1346/1389 (96%) EPI461090 A/duck/Guangxi/GXd-1/2009 (A/H6N5) segment 6 (NA) 2316.8 0.000000e+00 1344/1389 (96%) EPI268287 A/duck/Hunan/5613/2003 (A/H6N5) segment 6 (NA) 2255.9 0.000000e+00 1333/1389 (95%) EPI600798 A/migratory duck/Jiangxi/7231/2003 (A/H10N5) segment 6 (NA) 2244.8 0.000000e+00 1331/1389 (95%) EPI600792 A/migratory duck/Jiangxi/6847/2003 (A/H10N5) segment 6 (NA) 2228.2 0.000000e+00 1328/1389 (95%) EPI618625 A/mallard/Sweden/343/2002 (A/H12N5) segment 6 (NA) 2200.5 0.000000e+00 1323/1389 (95%) EPI377768 A/mallard/Sweden/30/2002 (A/H2N5) segment 6 (NA) 2194.9 0.000000e+00 1322/1389 (95%) EPI296546 A/Bewicks swan/Netherlands/1/2007 (A/H1N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI190186 A/mallard/Switzerland/WV4060167/2006 (A/H3N5) segment 6 (NA) 2167.2 0.000000e+00 1317/1389 (94%) EPI618665 A/mallard/Sweden/2213/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618645 A/mallard/Sweden/69794/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI618630 A/mallard/Sweden/68529/2007 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1317/1390 (94%) EPI514607 A/mallard/Sweden/50709/2006 (A/H4N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI251818 A/mallard/Sweden/86/2003 (A/H12N5) segment 6 (NA) 2161.7 0.000000e+00 1316/1389 (94%) EPI618616 A/mallard/Sweden/60069/2007 (A/H12N5) segment 6 (NA) 2156.2 0.000000e+00 1316/1390 (94%) EPI618602 A/mallard/Sweden/50968/2006 (A/H12N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI296562 A/black-headed gull/Netherlands/1/2006 (A/H4N5) segment 6 (NA) 2139.5 0.000000e+00 1312/1389 (94%) EPI890453 A/greater white-fronted goose/Netherlands/3/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI760593 A/wigeon/Italy/6127-23/2007 (A/H6N5) segment 6 (NA) 2134.0 0.000000e+00 1311/1389 (94%) EPI618810 A/mallard/Sweden/69773/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI618769 A/mallard/Sweden/69792/2007 (A/H10N5) segment 6 (NA) 2134.0 0.000000e+00 1312/1390 (94%) EPI463356 A/mallard/Sweden/100127/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463355 A/mallard/Sweden/100117/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI463353 A/mallard/Sweden/100103/2009 (A/H12N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI251663 A/mallard/Netherlands/2/1999 (A/H3N5) segment 6 (NA) 2128.5 0.000000e+00 1311/1390 (94%) EPI174859 A/mallard/Denmark/77-64590-5/2005 (A/H7N5) segment 6 (NA) 2122.9 0.000000e+00 1311/1391 (94%) EPI345387 A/Arenaria interpres/Belgium/02936pcs1/2010 (A/H12N5) segment 6 (NA) 2111.8 0.000000e+00 1308/1390 (94%) EPI295953 A/duck/Yangzhou/013/2008 (A/H6N5) segment 6 (NA) 2111.8 0.000000e+00 1307/1389 (94%) EPI476025 A/greylag goose/Iceland/1459/2011 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1307/1390 (94%) EPI316866 A/mallard/Czech Republic/14924-1/2007 (A/H6N5) segment 6 (NA) 2106.3 0.000000e+00 1306/1389 (94%) EPI397609 A/sentinel mallard/Germany/sum156/2007 (A/H6N5) segment 6 (NA) 2100.8 0.000000e+00 1306/1390 (93%) EPI259429 A/duck/Hokkaido/111/2009 (A/H1N5) segment 6 (NA) 2100.8 0.000000e+00 1305/1389 (93%) EPI476092 A/greylag goose/Iceland/0953/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI476074 A/greylag goose/Iceland/0948/2011 (A/H6N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328876 A/duck/Eastern China/031/2009 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1305/1390 (93%) EPI328868 A/duck/Eastern China/008/2008 (A/H5N5) segment 6 (NA) 2095.2 0.000000e+00 1304/1389 (93%) EPI160652 A/duck/Hokkaido/24/04 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI160651 A/duck/Mongolia/149/03 (A/H10N5) segment 6 (NA) 2095.2 0.000000e+00 1306/1391 (93%) EPI1871 A/duck/Hokkaido/1058/01 (A/H4N5) segment 6 (NA) 2089.7 0.000000e+00 1305/1391 (93%) EPI476059 A/black-headed gull/Iceland/1298/2011 (A/H10N5) segment 6 (NA) 2084.1 0.000000e+00 1304/1391 (93%) EPI181656 A/duck/Tsukuba/255/2005 (A/H8N5) segment 6 (NA) 2078.6 0.000000e+00 1304/1392 (93%) EPI363513 A/duck/Guizhou/888/2006 (A/H6N5) segment 6 (NA) 2073.1 0.000000e+00 1302/1391 (93%) EPI534745 A/mallard/Finland/10952/2008 (A/H4N5) segment 6 (NA) 2071.2 0.000000e+00 1297/1385 (93%) EPI764880 A/duck/Bangladesh/18-C/2013 (A/H1N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI357827 A/duck/Mongolia/OIE-7457/2011 (A/H3N5) segment 6 (NA) 2067.5 0.000000e+00 1300/1390 (93%) EPI268286 A/duck/Guangxi/1455/2004 (A/H6N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI1887 A/duck/Hokkaido/66/01 (A/H12N5) segment 6 (NA) 2067.5 0.000000e+00 1301/1391 (93%) EPI102207 A/duck/Taiwan/WB459/04 (A/H6N5) segment 6 (NA) 2062.0 0.000000e+00 1300/1391 (93%) EPI299316 A/avian/Japan/8KI0040/2008 (A/H3N5) segment 6 (NA) 2056.4 0.000000e+00 1300/1392 (93%) EPI764882 A/duck/Bangladesh/33-O/2013 (A/H2N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI442027 A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 6 (NA) 2050.9 0.000000e+00 1296/1389 (93%) EPI268283 A/duck/Guangxi/585/2005 (A/H6N5) segment 6 (NA) 2050.9 0.000000e+00 1298/1391 (93%) EPI493827 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI493819 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 6 (NA) 2045.4 0.000000e+00 1296/1390 (93%) EPI338864 A/aquatic bird/Korea/W69/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI299284 A/avian/Japan/8KI0135/2008 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1298/1392 (93%) EPI181654 A/duck/Tsukuba/11/2005 (A/H6N5) segment 6 (NA) 2045.4 0.000000e+00 1297/1391 (93%) EPI268285 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI181655 A/duck/Shiga/69/2006 (A/H6N5) segment 6 (NA) 2039.8 0.000000e+00 1297/1392 (93%) EPI268284 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1296/1392 (93%) EPI268282 A/duck/Hunan/748/2005 (A/H6N5) segment 6 (NA) 2034.3 0.000000e+00 1295/1391 (93%) EPI493835 A/duck/Guangdong/wy24/2008 (A/H5N5) segment 6 (NA) 2028.7 0.000000e+00 1293/1390 (93%) EPI618588 A/mallard/Sweden/3328/2003 (A/H12N5) segment 6 (NA) 2012.1 0.000000e+00 1289/1389 (92%) EPI182107 A/mallard/Netherlands/11/2007 (A/H6N5) segment 6 (NA) 1995.5 0.000000e+00 1289/1392 (92%) EPI442003 A/goose/Shandong/k1204/2009 (A/H5N5) segment 6 (NA) 1993.7 0.000000e+00 1264/1356 (93%) EPI889488 A/mallard duck/Netherlands/13/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI408363 A/wild duck/Korea/SH12-7/2008 (A/H10N5) segment 6 (NA) 1990.0 0.000000e+00 1287/1391 (92%) EPI221527 A/Anas plathyrhynchos/Spain/1252/2007 (A/H6N5) segment 6 (NA) 1990.0 0.000000e+00 1288/1392 (92%) EPI454768 A/ruddy turnstone/Delaware/AI03-162/2003 (A/H0) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI454761 A/ruddy turnstone/Delaware/AI03-165/2003 (A/H9N5) segment 6 (NA) 1984.4 0.000000e+00 1287/1392 (92%) EPI343733 A/shorebird/Delaware Bay/246/2003 (A/H9N5) segment 6 (NA) 1978.9 0.000000e+00 1286/1392 (92%) EPI574266 A/mule duck/Bulgaria/674/2010 (A/H6N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI454689 A/ruddy turnstone/Delaware/AI03-193/2003 (A/H9N5) segment 6 (NA) 1973.3 0.000000e+00 1286/1393 (92%) EPI617866 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 6 (NA) 1967.8 0.000000e+00 1287/1395 (92%) EPI315149 A/duck/Vietnam/G18/2009 (A/H12N5) segment 6 (NA) 1956.7 0.000000e+00 1283/1393 (92%) EPI534755 A/mallard/Finland/13016/2008 (A/H12N5) segment 6 (NA) 1916.1 0.000000e+00 1202/1284 (93%) EPI399888 A/duck/HuBei/03/2010 (A/H5N5) segment 6 (NA) 1895.8 0.000000e+00 1271/1392 (91%) EPI395082 A/swine/Hubei/10/2008 (A/H10N5) segment 6 (NA) 1895.8 0.000000e+00 1270/1391 (91%) EPI816852 A/chinstrap penguin/Antarctica/B04/2015 (A/H5N5) segment 6 (NA) 1890.2 0.000000e+00 1270/1392 (91%) EPI774536 A/Chinstrap penguin/Antarctica/15459/2015 (A/H5N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI316499 A/chicken/Hubei/119/1983 (A/H10N5) segment 6 (NA) 1884.7 0.000000e+00 1269/1392 (91%) EPI407981 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI3007 A/mallard/Astrakhan/263/1982 (A/H14N5) segment 6 (NA) 1868.1 0.000000e+00 1265/1391 (90%) EPI704456 A/duck/Hong Kong/934/1980 (A/H10N5) segment 6 (NA) 1862.5 0.000000e+00 1265/1392 (90%) EPI442011 A/goose/Guangdong/k0103/2010 (A/H5N5) segment 6 (NA) 1851.5 0.000000e+00 1262/1391 (90%) EPI418314 A/duck/Vietnam/OIE-707/2011 (A/H11N5) segment 6 (NA) 1812.7 0.000000e+00 1258/1394 (90%) EPI290489 A/common murre/Oregon/19497-004/2005 (A/H9N5) segment 6 (NA) 1785.0 0.000000e+00 1252/1393 (89%) EPI184639 A/mallard/Gurjev/263/1982 (A/H14N5) segment 6 (NA) 1785.0 0.000000e+00 1223/1350 (90%) EPI700304 A/duck/Cambodia/1426W44M3/2013 (A/H2N5) segment 6 (NA) 1707.4 0.000000e+00 1229/1379 (89%) EPI407910 A/shearwater/Australia/1/1973 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%) EPI242559 A/shearwater/Australia/1/1972 (A/H6N5) segment 6 (NA) 1458.1 0.000000e+00 1202/1400 (85%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Descriptions Align Segment-ID Name Score E-Value Identity EPI931201 A/mute swan/Czech Republic/2031-17/2017 (H5N5) (A/H5N5) segment 7 (MP) 1391.6 0.000000e+00 753/753 (100%) EPI826909 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774437 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774364 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774297 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI774221 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI773760 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 7 (MP) 1380.6 0.000000e+00 751/753 (99%) EPI959427 A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931199 A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI931112 A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930844 A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI930839 A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909463 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909455 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI909367 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881282 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI881277 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI869946 A/herring gull/Poland/84/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI861570 A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860498 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860404 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860396 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI860237 A/wild duck/Poland/82A/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI859654 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823751 A/wild duck/Tyva/35/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI823463 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774501 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774485 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774453 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774413 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774397 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774347 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774338 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774330 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774321 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774271 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774245 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774229 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774213 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774179 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 7 (MP) 1375.0 0.000000e+00 750/753 (99%) EPI774355 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774289 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774280 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI774145 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 7 (MP) 1371.3 0.000000e+00 748/751 (99%) EPI959421 A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942946 A/chicken/Wales/000023/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI942938 A/turkey/England/003778/2017 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI931196 A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI930842 A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI919638 A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI917482 A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916524 A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI916387 A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869812 A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI869690 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI868851 A/turkey/England/052131/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863868 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI863860 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI858840 A/duck/India/10CA01/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI836617 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI823759 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774509 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774493 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774478 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774421 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774405 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774313 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774237 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI774162 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 7 (MP) 1369.5 0.000000e+00 749/753 (99%) EPI888279 A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 748/753 (99%) EPI774429 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 7 (MP) 1367.6 0.000000e+00 746/749 (99%) EPI916606 A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863852 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863837 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI863829 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 748/753 (99%) EPI774389 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774262 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774254 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774204 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI774153 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 7 (MP) 1365.8 0.000000e+00 747/751 (99%) EPI952800 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI925951 A/gadwall/Chany/97/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909469 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909447 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909439 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI909431 A/turkey/Rostov/11/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI888091 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI887471 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI836609 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774381 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774171 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 748/753 (99%) EPI774137 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 7 (MP) 1363.9 0.000000e+00 749/754 (99%) EPI774305 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774196 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774188 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774123 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI774116 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 7 (MP) 1360.3 0.000000e+00 746/751 (99%) EPI952642 A/chicken/Korea/H903/2017 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI858847 A/painted stork/India/10CA03/2016 (A/H5N8) segment 7 (MP) 1358.4 0.000000e+00 747/753 (99%) EPI909423 A/chicken/Voronezh/20/2017 (A/H5N8) segment 7 (MP) 1352.9 0.000000e+00 746/753 (99%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI602445 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602438 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602400 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602379 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602372 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599877 A/duck/Jiangxi/33779/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599870 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599856 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI599835 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 1 (PB2) 3962.2 0.000000e+00 2235/2280 (98%) EPI602386 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602326 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI602452 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602424 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602393 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602347 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602340 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602333 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599863 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599842 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI599828 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI602431 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2232/2280 (97%) EPI602407 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI704296 A/duck/Mongolia/141/2015 (A/H0N2) segment 1 (PB2) 3945.6 0.000000e+00 2242/2295 (97%) EPI599849 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI704500 A/duck/Mongolia/326/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI704478 A/duck/Mongolia/245/2015 (A/H10N3) segment 1 (PB2) 3940.0 0.000000e+00 2241/2295 (97%) EPI600182 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600176 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600170 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600162 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI600156 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591921 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI591915 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI591909 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%) EPI890976 A/mallard duck/Netherlands/2/2011 (A/H10N7) segment 1 (PB2) 3917.9 0.000000e+00 2237/2295 (97%) EPI890786 A/mallard duck/Netherlands/47/2010 (A/H10N7) segment 1 (PB2) 3912.3 0.000000e+00 2236/2295 (97%) EPI703415 A/duck/Fujian/JF47/2014 (A/H1N1) segment 1 (PB2) 3910.5 0.000000e+00 2213/2261 (97%) EPI574291 A/duck/Vietnam/LBM48/2011 (A/H3N2) segment 1 (PB2) 3906.8 0.000000e+00 2231/2289 (97%) EPI596394 A/muscovy duck/Vietnam/LBM115/2012 (A/H3N2) segment 1 (PB2) 3890.2 0.000000e+00 2232/2295 (97%) EPI401796 A/canvasback/Xianghai/428/2011 (A/H5N2) segment 1 (PB2) 3890.2 0.000000e+00 2222/2280 (97%) EPI617989 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 1 (PB2) 3873.5 0.000000e+00 2220/2281 (97%) EPI463584 A/tundra swan/Shimane/3211A001/2011 (A/H5N2) segment 1 (PB2) 3868.0 0.000000e+00 2229/2296 (97%) EPI942332 A/duck/Shanghai/602/2009 (A/H10N8) segment 1 (PB2) 3856.9 0.000000e+00 2226/2295 (96%) EPI618102 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 1 (PB2) 3851.4 0.000000e+00 2215/2280 (97%) EPI889413 A/mallard duck/Netherlands/9/2013 (A/H6N8) segment 1 (PB2) 3840.3 0.000000e+00 2223/2295 (96%) EPI692509 A/duck/Hunan/S1166/2010 (A/H4N6) segment 1 (PB2) 3840.3 0.000000e+00 2214/2281 (97%) EPI560058 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 1 (PB2) 3840.3 0.000000e+00 2213/2280 (97%) EPI527564 A/common goldeneye/Mongolia/1216/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI527545 A/tufted duck/Mongolia/1409/2010 (A/H1N1) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI324555 A/quail/Lebanon/273/2010 (A/H9N2) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%) EPI618117 A/black-headed gull/Republic of Georgia/1/2010 (A/H11N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI527563 A/common goldeneye/Mongolia/1238/2010 (A/H1N1) segment 1 (PB2) 3823.7 0.000000e+00 2210/2280 (96%) EPI361736 A/lesser whistling-duck/Thailand/CU-W3946/2010 (A/H12N1) segment 1 (PB2) 3823.7 0.000000e+00 2202/2268 (97%) EPI461612 A/duck/Hunan/S11893/2012 (A/H4N6) segment 1 (PB2) 3818.1 0.000000e+00 2209/2280 (96%) EPI395159 A/duck/Vietnam/LBM1/2011 (A/H4N6) segment 1 (PB2) 3812.6 0.000000e+00 2219/2296 (96%) EPI372391 A/Egyptian goose/Egypt/05588-NAMRU3/2006 (A/H7N7) segment 1 (PB2) 3812.6 0.000000e+00 2210/2282 (96%) EPI617950 A/black-headed gull/Republic of Georgia/2/2011 (A/H9N1) segment 1 (PB2) 3807.1 0.000000e+00 2207/2280 (96%) EPI775000 A/duck/Shanghai/120-1/2009 (A/H3N8) segment 1 (PB2) 3801.5 0.000000e+00 2217/2296 (96%) EPI703416 A/duck/Yunan/V286/2012 (A/H1N2) segment 1 (PB2) 3794.1 0.000000e+00 2192/2261 (96%) EPI361726 A/lesser whistling-duck/Thailand/CU-W3941/2010 (A/H12N1) segment 1 (PB2) 3792.3 0.000000e+00 2194/2264 (96%) EPI387906 A/mallard/Korea/1041/2010 (A/H10N8) segment 1 (PB2) 3790.4 0.000000e+00 2205/2281 (96%) EPI619253 A/mallard/Sweden/5994/2005 (A/H7N7) segment 1 (PB2) 3786.8 0.000000e+00 2215/2296 (96%) EPI619239 A/mallard/Sweden/5927/2005 (A/H0) segment 1 (PB2) 3786.8 0.000000e+00 2214/2295 (96%) EPI527553 A/ruddy shelduck/Mongolia/921C2/2009 (A/H7N1) segment 1 (PB2) 3784.9 0.000000e+00 2204/2281 (96%) EPI508037 A/wild duck/Korea/CSM42-34/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI508036 A/wild duck/Korea/CSM42-1/2011 (A/H7N9) segment 1 (PB2) 3784.9 0.000000e+00 2214/2296 (96%) EPI395168 A/muscovy duck/Vietnam/LBM14/2011 (H3N2) (A/H3N2) segment 1 (PB2) 3779.4 0.000000e+00 2213/2296 (96%) EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 3779.4 0.000000e+00 2203/2281 (96%) EPI775005 A/duck/Hebei/B1647-1/2011 (A/H3N2) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI469129 A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 1 (PB2) 3773.8 0.000000e+00 2202/2281 (96%) EPI692469 A/duck/Henan/S4179/2009 (A/H4N6) segment 1 (PB2) 3768.3 0.000000e+00 2200/2280 (96%) EPI618220 A/mallard/Sweden/5944/2005 (A/H7N7) segment 1 (PB2) 3768.3 0.000000e+00 2202/2282 (96%) EPI617797 A/black-headed gull/Republic of Georgia/7/2012 (A/H2N7) segment 1 (PB2) 3757.2 0.000000e+00 2199/2281 (96%) EPI361746 A/lesser whistling-duck/Thailand/CU-W3947/2010 (A/H12N1) segment 1 (PB2) 3748.0 0.000000e+00 2170/2240 (96%) EPI617839 A/black-headed gull/Republic of Georgia/9/2012 (A/H2N5) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372304 A/teal/Egypt/00835-NAMRU3/2004 (A/H7N7) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372280 A/shoveler/Egypt/00597-NAMRU3/2004 (A/H7N1) segment 1 (PB2) 3746.1 0.000000e+00 2198/2282 (96%) EPI372288 A/shoveler/Egypt/00600-NAMRU3/2004 (A/H10N7) segment 1 (PB2) 3740.6 0.000000e+00 2197/2282 (96%) EPI361718 A/watercock/Thailand/CU-W3699/2009 (A/H12N1) segment 1 (PB2) 3731.4 0.000000e+00 2180/2259 (96%) EPI296631 A/mallard/Sweden/95/2005 (A/H7N7) segment 1 (PB2) 3731.4 0.000000e+00 2204/2295 (96%) EPI372493 A/pied avocet/Ukraine/05848-NAMRU3/2006 (A/H10N4) segment 1 (PB2) 3729.5 0.000000e+00 2195/2282 (96%) EPI618307 A/mallard/Sweden/68621/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI618293 A/mallard/Sweden/69639/2007 (A/H11N9) segment 1 (PB2) 3724.0 0.000000e+00 2204/2297 (95%) EPI270059 A/aquatic bird/India/NIV-17095/2007 (A/H11N1) segment 1 (PB2) 3724.0 0.000000e+00 2194/2282 (96%) EPI959432 A/chicken/Poland/79A/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI959416 A/domestic goose/Poland/33/2016 (A/H5N8) segment 1 (PB2) 3718.4 0.000000e+00 2201/2295 (95%) EPI513753 A/mallard/Sweden/79978/2008 (A/H4N6) segment 1 (PB2) 3718.4 0.000000e+00 2203/2297 (95%) EPI372509 A/garganey/Ukraine/05835-NAMRU3/2006 (A/H8N4) segment 1 (PB2) 3718.4 0.000000e+00 2193/2282 (96%) EPI869806 A/duck/France/161108h/2016 (A/H5N8) segment 1 (PB2) 3712.9 0.000000e+00 2200/2295 (95%) EPI618400 A/mallard/Sweden/79984/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618386 A/mallard/Sweden/79436/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI618372 A/mallard/Sweden/80079/2008 (A/H11N9) segment 1 (PB2) 3712.9 0.000000e+00 2202/2297 (95%) EPI867457 A/mute swan/Croatia/70/2016 (A/H5N8) segment 1 (PB2) 3709.2 0.000000e+00 2194/2287 (95%) EPI749574 A/Environment/Chongqing/45208/2015 (A/H5N6) segment 1 (PB2) 3707.3 0.000000e+00 2189/2280 (96%) EPI618365 A/mallard/Sweden/80253/2008 (A/H11N9) segment 1 (PB2) 3707.3 0.000000e+00 2201/2297 (95%) EPI750183 A/goose/Taiwan/01038/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI750103 A/chicken/Taiwan/01174/2015 (A/H5N3) segment 1 (PB2) 3701.8 0.000000e+00 2199/2296 (95%) EPI372368 A/shoveler/Egypt/13251-NAMRU3/2006 (A/H6N2) segment 1 (PB2) 3701.8 0.000000e+00 2190/2282 (95%) EPI363564 A/wild duck/Jiangxi/8462/2006 (A/H6N1) segment 1 (PB2) 3701.8 0.000000e+00 2189/2281 (95%) EPI178535 A/Duck/Italy/62330/2006 (A/H10N7) segment 1 (PB2) 3701.8 0.000000e+00 2200/2297 (95%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI959441 A/mute swan/Poland/64/2017 (A/H5N5) segment 2 (PB1) 4196.7 0.000000e+00 2274/2274 (100%) EPI942215 A/duck/Hubei/ZYSYG3/2015 (A/H6N2) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704534 A/duck/Mongolia/709/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704526 A/duck/Mongolia/626/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI704509 A/duck/Mongolia/499/2015 (A/H10N7) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI942217 A/duck/Hubei/ZYSYG8/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI942216 A/duck/Hubei/ZYSYG7/2015 (A/H6N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704396 A/duck/Mongolia/520/2015 (A/H1N1) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI704501 A/duck/Mongolia/326/2015 (A/H10N3) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI704479 A/duck/Mongolia/245/2015 (A/H10N3) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI704297 A/duck/Mongolia/141/2015 (A/H0N2) segment 2 (PB1) 3997.3 0.000000e+00 2237/2274 (98%) EPI618043 A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 2 (PB1) 3991.7 0.000000e+00 2236/2274 (98%) EPI891424 A/mallard duck/Netherlands/26/2010 (A/H4N6) segment 2 (PB1) 3986.2 0.000000e+00 2236/2275 (98%) EPI617988 A/mallard/Republic of Georgia/3/2011 (A/H3N8) segment 2 (PB1) 3967.7 0.000000e+00 2231/2273 (98%) EPI617899 A/mallard/Republic of Georgia/1/2012 (A/H1N1) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI617760 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 2 (PB1) 3958.5 0.000000e+00 2230/2274 (98%) EPI891371 A/mallard duck/Netherlands/6/2013 (A/H3N8) segment 2 (PB1) 3953.0 0.000000e+00 2229/2274 (98%) EPI891426 A/mallard duck/Netherlands/26/2011 (A/H11N9) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI618617 A/mallard/Sweden/133546/2011 (A/H10N4) segment 2 (PB1) 3947.4 0.000000e+00 2228/2274 (97%) EPI891301 A/greater white-fronted goose/Netherlands/2/2010 (A/H5N2) segment 2 (PB1) 3925.3 0.000000e+00 2224/2274 (97%) EPI514974 A/mallard/Sweden/80261/2008 (A/H4N9) segment 2 (PB1) 3914.2 0.000000e+00 2222/2274 (97%) EPI464920 A/guinea fowl/Italy/10VIR-218-134/2010 (A/H5N2) segment 2 (PB1) 3914.2 0.000000e+00 2218/2268 (97%) EPI623944 A/chicken/England/26352/2015 (A/H7N7) segment 2 (PB1) 3908.6 0.000000e+00 2221/2274 (97%) EPI629347 A/chicken/NL-Barneveld/15004745-006-010/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI629339 A/Chicken/NL-Barneveld/15004745-001-005/2015 (A/H7N7) segment 2 (PB1) 3897.6 0.000000e+00 2219/2274 (97%) EPI540405 A/waterfowl/Bangladesh/12301/2013 (A/H6N7) segment 2 (PB1) 3877.2 0.000000e+00 2215/2274 (97%) EPI940659 A/duck/India/11CL01/2014 (A/H6N2) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI372361 A/shoveler/Egypt/14879-NAMRU3/2006 (A/H7N1) segment 2 (PB1) 3875.4 0.000000e+00 2215/2274 (97%) EPI560057 A/mallard/Novomychalivka/2-23-12/2010 (A/H15N7) segment 2 (PB1) 3866.2 0.000000e+00 2212/2272 (97%) EPI182047 A/common eider/Netherlands/1/2006 (A/H3N8) segment 2 (PB1) 3858.8 0.000000e+00 2213/2275 (97%) EPI617954 A/Mediterranean gull/Republic of Georgia/1/2011 (A/H9N3) segment 2 (PB1) 3853.2 0.000000e+00 2211/2274 (97%) EPI617793 A/yellow-legged gull/Republic of Georgia/1/2012 (A/H0) segment 2 (PB1) 3853.2 0.000000e+00 2212/2275 (97%) EPI887466 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 2 (PB1) 3831.1 0.000000e+00 2208/2275 (97%) EPI839726 A/chicken/France/150169a/2015 (A/H5N1) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704370 A/duck/Mongolia/211/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704362 A/duck/Mongolia/208/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI704313 A/duck/Mongolia/167/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693704 A/duck/Mongolia/83/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI693696 A/duck/Mongolia/20/2015 (A/H3N8) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI464928 A/chicken/Italy/11VIR-7548/2011 (A/H5N2) segment 2 (PB1) 3831.1 0.000000e+00 2207/2274 (97%) EPI959417 A/domestic goose/Poland/33/2016 (A/H5N8) segment 2 (PB1) 3825.5 0.000000e+00 2207/2275 (97%) EPI617820 A/tufted duck/Republic of Georgia/1/2012 (A/H2N3) segment 2 (PB1) 3825.5 0.000000e+00 2206/2274 (97%) EPI891412 A/mallard duck/Netherlands/30/2010 (A/H3N8) segment 2 (PB1) 3797.8 0.000000e+00 2202/2275 (96%) EPI891408 A/mallard duck/Netherlands/67/2008 (A/H10N7) segment 2 (PB1) 3786.8 0.000000e+00 2199/2274 (96%) EPI891297 A/mallard duck/Netherlands/2/2015 (A/H7N7) segment 2 (PB1) 3786.8 0.000000e+00 2200/2275 (96%) EPI891469 A/mallard duck/Netherlands/1/2009 (A/H10N7) segment 2 (PB1) 3781.2 0.000000e+00 2198/2274 (96%) EPI345434 A/Larus argentatus/Belgium/02936cls9/2010 (A/H5N2) segment 2 (PB1) 3777.5 0.000000e+00 2193/2267 (96%) EPI891291 A/mallard duck/Netherlands/29/2009 (A/H11N9) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464944 A/chicken/Italy/12VIR-7785-67/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI464936 A/turkey/Italy/12VIR-6607-5/2012 (A/H5N2) segment 2 (PB1) 3775.7 0.000000e+00 2197/2274 (96%) EPI618937 A/mallard/Sweden/101165/2009 (A/H8N4) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI618407 A/mallard/Sweden/101589/2009 (A/H11N9) segment 2 (PB1) 3770.1 0.000000e+00 2197/2275 (96%) EPI464952 A/turkey/Italy/12VIR-8036-2/2012 (A/H5N2) segment 2 (PB1) 3770.1 0.000000e+00 2196/2274 (96%) EPI891326 A/greater white-fronted goose/Netherlands/4/2011 (A/H1N1) segment 2 (PB1) 3764.6 0.000000e+00 2196/2275 (96%) EPI618651 A/mallard/Sweden/69794/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618636 A/mallard/Sweden/68529/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618622 A/mallard/Sweden/60069/2007 (A/H12N5) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618605 A/mallard/Sweden/107688/2009 (A/H10N1) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI211183 A/mallard/Poland/16/09 (A/H7N7) segment 2 (PB1) 3764.6 0.000000e+00 2195/2274 (96%) EPI618014 A/mallard/Republic of Georgia/4/2010 (A/H1N1) segment 2 (PB1) 3753.5 0.000000e+00 2194/2275 (96%) EPI687185 A/chicken/Scotland/532/2016 (A/H5N1) segment 2 (PB1) 3749.8 0.000000e+00 2149/2209 (97%) EPI891374 A/mallard duck/Netherlands/51/2010 (A/H1N1) segment 2 (PB1) 3748.0 0.000000e+00 2192/2274 (96%) EPI475930 A/mallard/Iceland/1007/2011 (A/H3N6) segment 2 (PB1) 3742.4 0.000000e+00 2191/2274 (96%) EPI618448 A/mallard/Sweden/101993/2009 (A/H2N9) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI457917 A/duck/Guangxi/GXd-4/2011 (A/H1N2) segment 2 (PB1) 3736.9 0.000000e+00 2190/2274 (96%) EPI378008 A/mallard/Netherlands/29/2010 (A/H2N3) segment 2 (PB1) 3736.9 0.000000e+00 2191/2275 (96%) EPI891447 A/mallard duck/Netherlands/7/2011 (A/H4N6) segment 2 (PB1) 3735.0 0.000000e+00 2190/2274 (96%) EPI387542 A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 2 (PB1) 3725.8 0.000000e+00 2189/2275 (96%) EPI891361 A/Eurasian wigeon/Netherlands/1/2010 (A/H5N2) segment 2 (PB1) 3720.3 0.000000e+00 2187/2274 (96%) EPI475944 A/great black-backed gull/Iceland/1110/2011 (A/H5N2) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI457909 A/duck/Guangxi/GXd-1/2011 (A/H1N2) segment 2 (PB1) 3714.7 0.000000e+00 2186/2274 (96%) EPI367587 A/mallard/Czech Republic/15008-11K/2009 (A/H5N3) segment 2 (PB1) 3714.7 0.000000e+00 2187/2275 (96%) EPI485721 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI439584 A/avian/Israel/289/2001 (A/H6N2) segment 2 (PB1) 3709.2 0.000000e+00 2185/2274 (96%) EPI236192 A/mallard/Sweden/49/2002 (A/H5N9) segment 2 (PB1) 3709.2 0.000000e+00 2186/2275 (96%) EPI433380 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI367595 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI284355 A/mallard/Czech Republic/15902-17K/2009 (A/H6N2) segment 2 (PB1) 3703.7 0.000000e+00 2185/2275 (96%) EPI891346 A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI891336 A/greater white-fronted goose/Netherlands/6/2010 (A/H6N2) segment 2 (PB1) 3698.1 0.000000e+00 2184/2275 (96%) EPI891221 A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 2 (PB1) 3698.1 0.000000e+00 2183/2274 (95%) EPI439586 A/avian/Israel/320/2001 (A/H6N2) segment 2 (PB1) 3694.4 0.000000e+00 2182/2274 (95%) EPI618214 A/mallard/Sweden/1689/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI618201 A/mallard/Sweden/1645/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI617059 A/mallard/Sweden/1671/2002 (A/H7N7) segment 2 (PB1) 3692.6 0.000000e+00 2183/2275 (95%) EPI891316 A/greater white-fronted goose/Netherlands/1/2011 (A/H6N8) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI618139 A/mallard/Sweden/1690/2002 (A/H7N7) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI372273 A/teal/Egypt/20431-NAMRU3/2003 (A/H1N2) segment 2 (PB1) 3687.0 0.000000e+00 2182/2275 (95%) EPI692423 A/duck/Guangxi/S1107/2010 (A/H4N6) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI285821 A/avian/Egypt/920431/2006 (A/H9N2) segment 2 (PB1) 3681.5 0.000000e+00 2181/2275 (95%) EPI692454 A/duck/Guizhou/S1167/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI692430 A/duck/Guangxi/S1211/2010 (A/H4N6) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI540165 A/duck/Bangladesh/1578/2009 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI540157 A/duck/Bangladesh/1595/2010 (A/H11N3) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI336987 A/duck/Zhejiang/2245/2011 (A/H5N1) segment 2 (PB1) 3676.0 0.000000e+00 2179/2274 (95%) EPI229961 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI173879 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI169291 A/duck/France/05057b/2005 (A/H5N2) segment 2 (PB1) 3676.0 0.000000e+00 2181/2276 (95%) EPI167837 A/goose/Italy/296426/2003 (A/H1N1) segment 2 (PB1) 3676.0 0.000000e+00 2180/2275 (95%) EPI891458 A/greater white-fronted goose/Netherlands/1/2007 (A/H1N1) segment 2 (PB1) 3670.4 0.000000e+00 2179/2275 (95%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI959440 A/mute swan/Poland/64/2017 (A/H5N5) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI774258 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774250 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI774393 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774184 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774120 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774112 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 3 (PA) 3895.7 0.000000e+00 2137/2151 (99%) EPI774385 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774309 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774301 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774241 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774233 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774167 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774158 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774149 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI773756 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 3 (PA) 3890.2 0.000000e+00 2136/2151 (99%) EPI774505 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774489 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774482 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774474 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774465 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774433 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774425 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774377 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774334 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774293 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774285 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774225 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774217 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774209 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 3 (PA) 3884.6 0.000000e+00 2135/2151 (99%) EPI774497 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774457 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774449 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774441 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774343 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774276 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774266 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774200 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774192 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774175 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%) EPI774141 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774131 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 3 (PA) 3879.1 0.000000e+00 2134/2151 (99%) EPI774368 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2134/2152 (99%) EPI774351 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774325 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI774317 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI836613 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI836605 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823755 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823747 A/wild duck/Tyva/35/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI823459 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774418 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774409 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774401 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI774360 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI909467 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI858835 A/duck/India/10CA01/2016 (A/H5N8) segment 3 (PA) 3845.8 0.000000e+00 2128/2151 (98%) EPI867456 A/mute swan/Croatia/70/2016 (A/H5N8) segment 3 (PA) 3829.2 0.000000e+00 2123/2148 (98%) EPI959430 A/chicken/Poland/79A/2016 (A/H5N8) segment 3 (PA) 3825.5 0.000000e+00 2124/2151 (98%) EPI869808 A/duck/France/161108h/2016 (A/H5N8) segment 3 (PA) 3823.7 0.000000e+00 2124/2151 (98%) EPI887467 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI959418 A/domestic goose/Poland/33/2016 (A/H5N8) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI515113 A/muscovy duck/Vietnam/LBM529/2013 (A/H3N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI704445 A/duck/Mongolia/996/2015 (A/H3N8) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI704306 A/duck/Mongolia/154/2015 (A/H0N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704282 A/duck/Mongolia/118/2015 (A/H4N6) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI693713 A/duck/Mongolia/66/2015 (A/H10N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%) EPI704502 A/duck/Mongolia/326/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704480 A/duck/Mongolia/245/2015 (A/H10N3) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704298 A/duck/Mongolia/141/2015 (A/H0N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%) EPI704429 A/duck/Mongolia/769/2015 (A/H4N6) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704397 A/duck/Mongolia/520/2015 (A/H1N1) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI693697 A/duck/Mongolia/20/2015 (A/H3N8) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI704266 A/duck/Mongolia/101/2015 (A/H4N6) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%) EPI704290 A/duck/Mongolia/127/2015 (A/H4N6) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%) EPI866092 A/duck/Korea/ES2/2016(H5N6) (A/H5N6) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%) EPI895128 A/whooper swan/Korea/Gangjin 49_2/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895105 A/whooper swan/Korea/Gangjin 48/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895095 A/environment/Korea/W544/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895094 A/environment/Korea/W543/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895093 A/environment/Korea/W542/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI895092 A/environment/Korea/W541/2016 (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866131 A/mandarin duck/Korea/WB246/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI866084 A/chicken/Korea/HN1/2016(H5N6) (A/H5N6) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%) EPI614278 A/mallard/Republic of Georgia/2/2012 (A/H2N3) segment 3 (PA) 3646.4 0.000000e+00 2092/2151 (97%) EPI614284 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI377637 A/northern shoveler/Georgia/1/2010 (A/H2N3) segment 3 (PA) 3624.2 0.000000e+00 2088/2151 (97%) EPI614253 A/garganey/Republic of Georgia/1/2011 (A/H4N2) segment 3 (PA) 3618.7 0.000000e+00 2087/2151 (97%) EPI614286 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 3 (PA) 3613.2 0.000000e+00 2086/2151 (96%) EPI614298 A/common coot/Republic of Georgia/1/2010 (A/H6N2) segment 3 (PA) 3607.6 0.000000e+00 2087/2153 (96%) EPI493025 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 3 (PA) 3563.3 0.000000e+00 2077/2151 (96%) EPI692567 A/duck/Sichuan/S4202/2011 (A/H4N2) segment 3 (PA) 3557.8 0.000000e+00 2076/2151 (96%) EPI363462 A/duck/Guangxi/1157/2006 (A/H6N2) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI118295 A/duck/Jiang Xi/2374/2005 (A/H3N6) segment 3 (PA) 3546.7 0.000000e+00 2074/2151 (96%) EPI890596 A/greater white-fronted goose/Netherlands/1/2012 (A/H1N1) segment 3 (PA) 3541.1 0.000000e+00 2073/2151 (96%) EPI773764 A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI363470 A/duck/Guangxi/1248/2006 (A/H6N2) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI316751 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 3 (PA) 3535.6 0.000000e+00 2072/2151 (96%) EPI296255 A/wild duck/Korea/SH60/2004 (A/H1N1) segment 3 (PA) 3535.6 0.000000e+00 2073/2152 (96%) EPI891127 A/mallard duck/Netherlands/13/2013 (A/H7N7) segment 3 (PA) 3530.1 0.000000e+00 2071/2151 (96%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI959438 A/mute swan/Poland/64/2017 (A/H5N5) segment 5 (NP) 2730.5 0.000000e+00 1478/1478 (100%) EPI926005 A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 5 (NP) 2658.4 0.000000e+00 1465/1478 (99%) EPI889966 A/mallard duck/Netherlands/7/2014 (A/H6N2) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI617869 A/mallard/Republic of Georgia/4/2012 (A/H1N1) segment 5 (NP) 2608.6 0.000000e+00 1456/1478 (98%) EPI687188 A/chicken/Scotland/532/2016 (A/H5N1) segment 5 (NP) 2564.3 0.000000e+00 1449/1479 (97%) EPI704357 A/duck/Mongolia/200/2015 (A/H3N8) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI493029 A/wild waterfowl/Dongting/C2383/2012 (A/H1N2) segment 5 (NP) 2558.7 0.000000e+00 1447/1478 (97%) EPI438282 A/duck/Vietnam/LBM300/2012 (A/H10N2) segment 5 (NP) 2553.2 0.000000e+00 1446/1478 (97%) EPI618038 A/domestic duck/Republic of Georgia/2/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI618025 A/domestic duck/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2547.7 0.000000e+00 1446/1479 (97%) EPI683033 A/wild bird/Wuhan/WHHN58/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI683032 A/wild bird/Wuhan/WHHN16/2014 (A/H1N1) segment 5 (NP) 2542.1 0.000000e+00 1444/1478 (97%) EPI601644 A/duck/Jiangxi/5581/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI601635 A/duck/Jiangxi/5576/2013 (A/H0) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI461630 A/duck/Hunan/S1256/2012 (A/H3N8) segment 5 (NP) 2536.6 0.000000e+00 1443/1478 (97%) EPI446508 A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI407865 A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 5 (NP) 2532.9 0.000000e+00 1442/1478 (97%) EPI942171 A/duck/Ganzhou/GZ5/2015 (A/H4N6) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI909468 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704373 A/duck/Mongolia/211/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704365 A/duck/Mongolia/208/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI704316 A/duck/Mongolia/167/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693707 A/duck/Mongolia/83/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI693699 A/duck/Mongolia/20/2015 (A/H3N8) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI601705 A/duck/Jiangxi/285/2013 (A/H0) segment 5 (NP) 2531.0 0.000000e+00 1442/1478 (97%) EPI600185 A/migratory duck/Jiangxi/33520/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600179 A/migratory duck/Jiangxi/33238/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600173 A/migratory duck/Jiangxi/33195/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600167 A/migratory duck/Jiangxi/33158/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI600159 A/migratory duck/Jiangxi/33038/2013 (A/H10N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI591918 A/wild bird/Jiangxi/34503/2013 (A/H7N7) segment 5 (NP) 2531.0 0.000000e+00 1443/1479 (97%) EPI703486 A/duck/Anhui/FA258/2013 (A/H1N3) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI703477 A/duck/Yunan/V286/2012 (A/H1N2) segment 5 (NP) 2529.2 0.000000e+00 1441/1477 (97%) EPI704447 A/duck/Mongolia/996/2015 (A/H3N8) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617996 A/mallard/Republic of Georgia/3/2010 (A/H7N3) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI617968 A/mallard/Republic of Georgia/1/2010 (A/H10N7) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI591924 A/wild bird/Jiangxi/35982/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI591912 A/wild bird/Jiangxi/34458/2013 (A/H7N7) segment 5 (NP) 2525.5 0.000000e+00 1442/1479 (97%) EPI470398 A/wild waterfowl/Hong Kong/MPP1311/2013 (A/H2N9) segment 5 (NP) 2525.5 0.000000e+00 1441/1478 (97%) EPI925997 A/mallard/Chany/355/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925989 A/gadwall/Chany/315/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI925981 A/mallard/Chany/313/2016 (A/H1N1) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI889141 A/wild bird/Jiangxi/P419/2016 (A/H6N8) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI841764 A/chicken/Jiangxi/C25/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI683035 A/wild bird/Wuhan/CDHN01/2015 (A/H11N9) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI601836 A/duck/Jiangxi/17142/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI601684 A/duck/Jiangxi/3961/2013 (A/H0) segment 5 (NP) 2520.0 0.000000e+00 1438/1475 (97%) EPI596424 A/duck/Vietnam/LBM439/2013 (A/H6N6) segment 5 (NP) 2520.0 0.000000e+00 1440/1478 (97%) EPI583947 A/chicken/Jiangxi/10784/2014 (A/H7N7) segment 5 (NP) 2520.0 0.000000e+00 1441/1479 (97%) EPI703476 A/duck/Fujian/JF47/2014 (A/H1N1) segment 5 (NP) 2518.1 0.000000e+00 1439/1477 (97%) EPI683042 A/chicken/Wuhan/WHJF/2014 (A/H5N2) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683037 A/wild bird/Wuhan/CDHN173/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI683036 A/wild bird/Wuhan/CDHN22/2015 (A/H11N9) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI664214 A/duck/Jiangxi/01.14 NCJD034-P/2015(Mixed) (A/H5N6) segment 5 (NP) 2514.4 0.000000e+00 1439/1478 (97%) EPI599810 A/duck/Jiangxi/15867/2013 (A/H10N3) segment 5 (NP) 2514.4 0.000000e+00 1440/1479 (97%) EPI692489 A/duck/Hubei/S2213/2012 (A/H4N2) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI618599 A/mallard/Sweden/107688/2009 (A/H10N1) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI617770 A/mallard/Republic of Georgia/15/2011 (A/H10N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI602410 A/duck/Jiangxi/33763/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI602350 A/duck/Jiangxi/33777/2013 (A/H10N3) segment 5 (NP) 2508.9 0.000000e+00 1439/1479 (97%) EPI596635 A/duck/Quang Ninh/14/2013 (A/H3N6) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI470377 A/wild duck/Jiangxi/19831/2009 (A/H7N7) segment 5 (NP) 2508.9 0.000000e+00 1438/1478 (97%) EPI891012 A/turnstone/Netherlands/1/2010 (A/H3N8) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI617758 A/mallard/Republic of Georgia/14/2011 (A/H10N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602448 A/duck/Jiangxi/33665/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602441 A/duck/Jiangxi/33663/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602403 A/duck/Jiangxi/33759/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602396 A/duck/Jiangxi/33757/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602389 A/duck/Jiangxi/33753/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602382 A/duck/Jiangxi/33713/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602375 A/duck/Jiangxi/33699/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602368 A/duck/Jiangxi/33695/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602343 A/duck/Jiangxi/33775/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602336 A/duck/Jiangxi/33769/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI602329 A/duck/Jiangxi/33765/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599873 A/duck/Jiangxi/33778/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599866 A/duck/Jiangxi/33747/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599859 A/duck/Jiangxi/33744/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599852 A/duck/Jiangxi/33701/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599845 A/duck/Jiangxi/33653/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599838 A/duck/Jiangxi/33641/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI599831 A/duck/Jiangxi/33629/2013 (A/H10N3) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI590035 A/duck/Quang Ninh/220/2014 (A/H3N2) segment 5 (NP) 2503.3 0.000000e+00 1438/1479 (97%) EPI392508 A/pintail/Korea/1173/09 (A/H7N7) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI315101 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 5 (NP) 2503.3 0.000000e+00 1437/1478 (97%) EPI602434 A/duck/Jiangxi/33651/2013 (A/H10N3) segment 5 (NP) 2501.5 0.000000e+00 1437/1479 (97%) EPI891060 A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI889265 A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836615 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI836607 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823757 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823749 A/wild duck/Tyva/35/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI823461 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI773758 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI602427 A/duck/Jiangxi/33637/2013 (A/H10N3) segment 5 (NP) 2497.8 0.000000e+00 1437/1479 (97%) EPI470441 A/wild waterfowl/Hong Kong/MPM2121/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470440 A/wild waterfowl/Hong Kong/MPL705/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470438 A/common teal/Hong Kong/MPL634/2011 (A/H7N7) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470436 A/common teal/Hong Kong/MPM1645/2011 (A/H7N1) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%) EPI470411 A/northern shoveler/Hong Kong/MPK276/2009 (A/H11N9) segment 5 (NP) 2497.8 0.000000e+00 1436/1478 (97%)
niman Posted March 17, 2017 Author Report Posted March 17, 2017 Align Segment-ID Name Score E-Value Identity EPI959439 A/mute swan/Poland/64/2017 (A/H5N5) segment 8 (NS) 1460.0 0.000000e+00 790/790 (100%) EPI858839 A/duck/India/10CA01/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836618 A/common tern /Uvs-Nuur Lake/26/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI836610 A/grey heron /Uvs-Nuur Lake/20/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823760 A/black-headed gull/Tyva/41/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823752 A/wild duck/Tyva/35/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI823464 A/great crested grebe/Tyva/34/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774263 A/Bar-headed Goose/Qinghai/BTY9-LU/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI774255 A/Bar-headed Goose/Qinghai/BTY9-B/2016 (A/H5N8) segment 8 (NS) 1437.8 0.000000e+00 786/790 (99%) EPI909470 A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774510 A/Great Black-headed Gull/Qinghai/YO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774502 A/Brown-headed Gull/Qinghai/ZTO6-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774486 A/Brown-headed Gull/Qinghai/ZTO6-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774479 A/Brown-headed Gull/Qinghai/ZTO5-K/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774471 A/Brown-headed Gull/Qinghai/ZTO5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774462 A/Brown-headed Gull/Qinghai/ZTO4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774454 A/Brown-headed Gull/Qinghai/ZTO3-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774446 A/Brown-headed Gull/Qinghai/ZTO3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774438 A/Brown-headed Gull/Qinghai/ZTO1-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774430 A/Brown-headed Gull/Qinghai/ZTO1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774422 A/Bar-headed Goose/Qinghai/BTY18-MU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774415 A/Bar-headed Goose/Qinghai/BTY18-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774406 A/Bar-headed Goose/Qinghai/BTY18-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774398 A/Bar-headed Goose/Qinghai/BTY17-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774390 A/Bar-headed Goose/Qinghai/BTY17-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774382 A/Bar-headed Goose/Qinghai/BTY16-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774373 A/Bar-headed Goose/Qinghai/BTY16-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774322 A/Bar-headed Goose/Qinghai/BTY13-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774314 A/Bar-headed Goose/Qinghai/BTY12-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774306 A/Bar-headed Goose/Qinghai/BTY12-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774298 A/Bar-headed Goose/Qinghai/BTY11-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774282 A/Bar-headed Goose/Qinghai/BTY10-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774247 A/Bar-headed Goose/Qinghai/BTY8-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774238 A/Bar-headed Goose/Qinghai/BTY8-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774230 A/Bar-headed Goose/Qinghai/BTY7-LU2/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774222 A/Bar-headed Goose/Qinghai/BTY7-LU1/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774189 A/Bar-headed Goose/Qinghai/BTY5-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774181 A/Bar-headed Goose/Qinghai/BTY4-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774172 A/Bar-headed Goose/Qinghai/BTY4-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774155 A/Bar-headed Goose/Qinghai/BTY3-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774146 A/Bar-headed Goose/Qinghai/BTY2-LU/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774138 A/Bar-headed Goose/Qinghai/BTY2-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774124 A/Bar-headed Goose/Qinghai/BTY1-LV/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI774117 A/Bar-headed Goose/Qinghai/BTY1-B/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI773761 A/great crested grebe/Uvs-Nuur Lake/341/2016 (A/H5N8) segment 8 (NS) 1432.3 0.000000e+00 785/790 (99%) EPI925950 A/gadwall/Chany/97/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI888092 A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI858848 A/painted stork/India/10CA03/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774494 A/Brown-headed Gull/Qinghai/ZTO6-SP/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774348 A/Bar-headed Goose/Qinghai/BTY14-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774340 A/Bar-headed Goose/Qinghai/BTY14-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774290 A/Bar-headed Goose/Qinghai/BTY11-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774273 A/Bar-headed Goose/Qinghai/BTY10-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI774214 A/Bar-headed Goose/Qinghai/BTY7-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774206 A/Bar-headed Goose/Qinghai/BTY6-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774197 A/Bar-headed Goose/Qinghai/BTY6-B/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 784/790 (99%) EPI774164 A/Bar-headed Goose/Qinghai/BTY3-LU/2016 (A/H5N8) segment 8 (NS) 1426.7 0.000000e+00 782/787 (99%) EPI909448 A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909440 A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909424 A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909416 A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909408 A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909400 A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909392 A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909384 A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI909368 A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869947 A/herring gull/Poland/84/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI869691 A/decoy_duck/France/161104e/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI863869 A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860499 A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860405 A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI860397 A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI859657 A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI774365 A/Bar-headed Goose/Qinghai/BTY15-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI774331 A/Bar-headed Goose/Qinghai/BTY13-LU/2016 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 781/787 (99%) EPI703688 A/duck/Eastern China/S1109/2014 (A/H5N8) segment 8 (NS) 1421.2 0.000000e+00 783/790 (99%) EPI959429 A/chicken/Poland/79A/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909464 A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909456 A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI909432 A/turkey/Rostov/11/2017 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI881283 A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI869813 A/duck/France/161108h/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 782/790 (98%) EPI774357 A/Bar-headed Goose/Qinghai/BTY15-B/2016 (A/H5N8) segment 8 (NS) 1415.7 0.000000e+00 780/787 (99%) EPI952643 A/chicken/Korea/H903/2017 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 782/791 (98%) EPI942947 A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI881278 A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI868852 A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863853 A/Chicken/Sweden/SVA161122KU0453/SZ0209318/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863838 A/Chicken/Sweden/SVA161122KU0453/SZ0209317/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI863830 A/Chicken/Sweden/SVA161122KU0453/SZ0209316/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI860238 A/wild duck/Poland/82A/2016 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 781/790 (98%) EPI861571 A/mute swan/Croatia/70/2016 (A/H5N8) segment 8 (NS) 1408.3 0.000000e+00 779/790 (98%) EPI863861 A/Chicken/Sweden/SVA161122KU0453/SZ0209321/2016 (A/H5N8) segment 8 (NS) 1406.4 0.000000e+00 780/790 (98%) EPI959420 A/domestic goose/Poland/33/2016 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI952801 A/mallard duck/Korea/WA137/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI942939 A/turkey/England/003778/2017 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI887472 A/chicken/Czech Republic/206-17_2/2017(H5N8) (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 780/790 (98%) EPI749883 A/Environment/Jiangsu/98335/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI690812 A/goose/Yangzhou/0420/2014 (A/H5N8) segment 8 (NS) 1404.6 0.000000e+00 781/791 (98%) EPI764785 A/duck/Shaoxing/5240/2013 (A/H0) segment 8 (NS) 1393.5 0.000000e+00 779/791 (98%)
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