Indiana H7N8 HPAI & LPAI Sequences At Genbank

niman · February 11, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI486916	A/northern pintail/California/2789/2011 (A/H9N2) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI549237	A/blue-winged teal/TX/AI12-802/2012 (A/H10N3) segment 3 (PA)	3812.6	0.000000e+00	2122/2151 (98%)
EPI511416	A/mallard/Wisconsin/11OS4368/2011 (A/H11N9) segment 3 (PA)	3801.5	0.000000e+00	2120/2151 (98%)
EPI549236	A/blue-winged teal/TX/AI12-801/2012 (A/H10N3) segment 3 (PA)	3796.0	0.000000e+00	2111/2139 (98%)
EPI584361	A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 3 (PA)	3790.4	0.000000e+00	2118/2151 (98%)
EPI526250	A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 3 (PA)	3784.9	0.000000e+00	2117/2151 (98%)
EPI614135	A/American green-winged teal/Ohio/12OS2256/2012 (A/H6N5) segment 3 (PA)	3779.4	0.000000e+00	2116/2151 (98%)
EPI614026	A/American green-winged teal/Wisconsin/12OS2997/2012 (A/H4N6) segment 3 (PA)	3779.4	0.000000e+00	2116/2151 (98%)
EPI343060	A/blue-winged teal/Alberta/378/2007 (A/H0) segment 3 (PA)	3779.4	0.000000e+00	2116/2151 (98%)
EPI343049	A/blue-winged teal/Alberta/380/2007 (A/H0) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI526211	A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI511468	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI345105	A/bufflehead/Alberta/399/2007 (A/H0) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI511376	A/greater scaup/Wisconsin/11OS5760/2011 (A/H10N2) segment 3 (PA)	3762.7	0.000000e+00	2113/2151 (98%)
EPI511371	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 3 (PA)	3762.7	0.000000e+00	2113/2151 (98%)
EPI511430	A/American green-winged teal/Mississippi/11OS5903/2011 (A/H4N6) segment 3 (PA)	3751.7	0.000000e+00	2111/2151 (98%)
EPI614117	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 3 (PA)	3746.1	0.000000e+00	2110/2151 (98%)
EPI511346	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 3 (PA)	3740.6	0.000000e+00	2109/2151 (98%)
EPI614088	A/mallard/Missouri/12OS5759/2012 (A/H11N9) segment 3 (PA)	3729.5	0.000000e+00	2107/2151 (97%)
EPI614017	A/blue winged-teal/Wisconsin/12OS3069/2012 (A/H11N9) segment 3 (PA)	3690.7	0.000000e+00	2100/2151 (97%)
EPI700509	A/mallard/Interior Alaska/11ML00069/2011 (A/H2N3) segment 3 (PA)	3685.2	0.000000e+00	2099/2151 (97%)
EPI227246	A/mallard/Alberta/11527/2005 (A/H3N8) segment 3 (PA)	3679.6	0.000000e+00	2098/2151 (97%)
EPI332987	A/pintail/Alaska/99/2005 (A/H0) segment 3 (PA)	3635.3	0.000000e+00	2090/2151 (97%)
EPI298663	A/mallard/Interior Alaska/6MP0891/2006 (A/H4N6) segment 3 (PA)	3635.3	0.000000e+00	2090/2151 (97%)
EPI614217	A/mallard/Alberta/26/2001 (A/H0) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI59866	A/green-winged teal/Ohio/1844/2005 (A/H11N9) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI49402	A/pintail/Alaska/310/2005 (A/H4N6) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI333931	A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 3 (PA)	3624.2	0.000000e+00	2089/2152 (97%)
EPI328225	A/mallard/California/8834/2008 (A/H5N9) segment 3 (PA)	3624.2	0.000000e+00	2088/2151 (97%)
EPI298535	A/northern pintail/Interior Alaska/6MP0817/2006 (A/H0) segment 3 (PA)	3624.2	0.000000e+00	2088/2151 (97%)
EPI238090	A/mallard/Minnesota/382/2000 (A/H5N3) segment 3 (PA)	3624.2	0.000000e+00	2088/2151 (97%)
EPI298607	A/green-winged teal/Interior Alaska/6MP1077/2006 (A/H3N8) segment 3 (PA)	3618.7	0.000000e+00	2087/2151 (97%)
EPI159138	A/mallard/MN/479/2000 (A/H5N3) segment 3 (PA)	3618.7	0.000000e+00	2087/2151 (97%)
EPI442231	A/greater white-fronted goose/Alaska/44064-108/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI299803	A/mallard/Interior Alaska/6MP0990R1/2006 (A/H0) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI298759	A/mallard/Interior Alaska/6MP0038BR2/2006 (A/H2N3) segment 3 (PA)	3613.2	0.000000e+00	2086/2151 (96%)
EPI298687	A/mallard/Interior Alaska/6MP0988/2006 (A/H0) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI298647	A/northern pintail/Interior Alaska/6MP0792/2006 (A/H2N3) segment 3 (PA)	3613.2	0.000000e+00	2086/2151 (96%)
EPI298575	A/mallard/Interior Alaska/6MP0992/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI298567	A/mallard/Interior Alaska/6MP0991/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288891	A/mallard/Alaska/44185-044/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288886	A/mallard/Alaska/44187-131/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288885	A/mallard/Alaska/44185-067/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288878	A/mallard/Alaska/44187-129/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288866	A/mallard/Alaska/44187-043/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288857	A/mallard/Alaska/44185-078/2006 (A/H3N2) segment 3 (PA)	3613.2	0.000000e+00	2087/2152 (96%)
EPI288884	A/mallard/Alaska/44185-043/2006 (A/H3N2) segment 3 (PA)	3605.8	0.000000e+00	2085/2152 (96%)
EPI442279	A/emperor goose/Alaska/44323-246/2007 (A/H3N8) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI442257	A/emperor goose/Alaska/44063-066/2006 (A/H2N5) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI288890	A/mallard/Alaska/44183-124/2006 (A/H2N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI229634	A/mallard/Maryland/948/2004 (A/H11N9) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI442254	A/emperor goose/Alaska/44063-075/2006 (A/H2N5) segment 3 (PA)	3598.4	0.000000e+00	2083/2151 (96%)
EPI614212	A/pintail/Alberta/25/2001 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI442233	A/emperor goose/Alaska/44064-075/2006 (A/H2N5) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI442230	A/brant/Alaska/44063-007/2006 (A/H2N1) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI343802	A/mallard/Alberta/22/2001 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI343794	A/mallard/Alberta/27/2001 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI299763	A/mallard/Interior Alaska/6MP0905/2006 (A/H10N9) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI298767	A/mallard/Interior Alaska/6MP0163AR2/2006 (A/H3N8) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI298671	A/mallard/Interior Alaska/6MP0951/2006 (A/H3N8) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI298639	A/mallard/Interior Alaska/6MP0272/2006 (A/H3N8) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229642	A/mallard/Maryland/950/2004 (A/H11N9) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229618	A/mallard/Maryland/922/2004 (A/H11N9) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229599	A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229592	A/green-winged teal/Ohio/648/2004 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI172224	A/blue-winged teal/Manitoba/13436/2005 (A/H3N8) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI166788	A/northern pintail/Alaska/44183-123/2006 (A/H2N3) segment 3 (PA)	3596.5	0.000000e+00	2077/2142 (96%)
EPI52155	A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI442260	A/emperor goose/Alaska/44063-029/2006 (A/H2N1) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI298735	A/mallard/Interior Alaska/6MP0972R1/2006 (A/H3N8) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI285899	A/northern pintail/California/466371/2006 (A/H5N2) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI229650	A/mallard/Maryland/954/2004 (A/H11N9) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI229626	A/mallard/Maryland/926/2004 (A/H11N9) segment 3 (PA)	3591.0	0.000000e+00	2083/2152 (96%)
EPI42054	A/mallard/Alberta/34/2001 (A/H7N1) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI442237	A/emperor goose/Alaska/44063-145/2006 (A/H2N1) segment 3 (PA)	3587.3	0.000000e+00	2081/2151 (96%)
EPI614244	A/northern shoveler/North Carolina/1523546/2005 (A/H0) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI298503	A/green-winged teal/Interior Alaska/6MP0736/2006 (A/H3N8) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI60208	A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI59999	A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI343337	A/mallard/Alberta/256/2006 (A/H0) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI342991	A/mallard/Alberta/507/2008 (A/H3N8) segment 3 (PA)	3579.9	0.000000e+00	2081/2152 (96%)
EPI275169	A/thick-billed murre/Alaska/44085-040/2006 (A/H10N3) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI80956	A/mallard/Alberta/24/01 (A/H7N3) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI475436	A/pintail/Alberta/68/2005 (A/H1N1) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI468612	A/mallard/Alberta/201/1998 (A/H1N1) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI454182	A/American black duck/North Carolina/1321373/2004 (A/H3N2) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI343304	A/mallard/Alberta/297/2006 (A/H4N6) segment 3 (PA)	3574.4	0.000000e+00	2080/2152 (96%)
EPI286504	A/American widgeon/Washington/466769/2006 (A/H5N2) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI229506	A/American black duck/North Carolina/675-075/2004 (A/H3N2) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI178029	A/northern pintail/California/44221-789/2006 (A/H5N2) segment 3 (PA)	3574.4	0.000000e+00	2073/2142 (96%)
EPI159712	A/turkey/CA/358533/2005 (A/H4N8) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI86732	A/mallard/ALB/201/1998 (A/H1N1) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI227285	A/mallard/California/GL30/2005 (A/H4N6) segment 3 (PA)	3570.7	0.000000e+00	2079/2152 (96%)
EPI468369	A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)	3568.8	0.000000e+00	2078/2151 (96%)
EPI435728	A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)	3568.8	0.000000e+00	2078/2151 (96%)
EPI343356	A/mallard/Alberta/246/2006 (A/H4N6) segment 3 (PA)	3568.8	0.000000e+00	2079/2152 (96%)
EPI343348	A/mallard/Alberta/254/2006 (A/H4N6) segment 3 (PA)	3568.8	0.000000e+00	2079/2152 (96%)
EPI343328	A/mallard/Alberta/258/2006 (A/H4N6) segment 3 (PA)	3568.8	0.000000e+00	2079/2152 (96%)
EPI229692	A/chicken/British Columbia/04 (A/H7N3) segment 3 (PA)	3568.8	0.000000e+00	2078/2151 (96%)
EPI178030	A/northern pintail/California/44221-794/2006 (A/H3N8) segment 3 (PA)	3568.8	0.000000e+00	2072/2142 (96%)

niman · February 11, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI334349	A/bufflehead/Illinois/4016/2009 (A/H4N8) segment 5 (NP)	2671.4	0.000000e+00	1480/1497 (98%)
EPI419535	A/American green-winged teal/Mississippi/11OS257/2011 (A/H11N9) segment 5 (NP)	2654.8	0.000000e+00	1477/1497 (98%)
EPI418545	A/mallard/Wisconsin/10OS3166/2010 (A/H0) segment 5 (NP)	2654.8	0.000000e+00	1477/1497 (98%)
EPI512266	A/blue-winged teal/Wisconsin/11OS2873/2011 (A/H3N2) segment 5 (NP)	2649.2	0.000000e+00	1476/1497 (98%)
EPI616325	A/northern shoveler/Missouri/12OS5755/2012 (A/H10N3) segment 5 (NP)	2632.6	0.000000e+00	1473/1497 (98%)
EPI328267	A/mallard/California/6957/2008 (A/H10N7) segment 5 (NP)	2632.6	0.000000e+00	1473/1497 (98%)
EPI616165	A/American green-winged teal/Ohio/12OS2137/2012 (A/H4N6) segment 5 (NP)	2627.1	0.000000e+00	1472/1497 (98%)
EPI512884	A/mallard/Wisconsin/11OS4204/2011 (A/H0) segment 5 (NP)	2627.1	0.000000e+00	1472/1497 (98%)
EPI689534	A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI328574	A/northern shoveler/California/9710/2008 (A/H10N7) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI299358	A/northern shoveler/Mississippi/09OS589/2009 (A/H4N6) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI333661	A/American green-winged teal/Mississippi/300/2010 (A/H11N9) segment 5 (NP)	2610.4	0.000000e+00	1469/1497 (98%)
EPI690051	A/northern shoveler/Nevada/A00505416/2008 (A/H7N6) segment 5 (NP)	2604.9	0.000000e+00	1469/1498 (98%)
EPI328481	A/green-winged teal/California/10197/2008 (A/H10N7) segment 5 (NP)	2604.9	0.000000e+00	1469/1498 (98%)
EPI645515	A/blue-winged teal/Ohio/13OS2104/2013 (A/H2N3) segment 5 (NP)	2588.3	0.000000e+00	1465/1497 (97%)
EPI178799	A/northern shoveler/California/HKWF392sm/2007 (A/H10N7) segment 5 (NP)	2588.3	0.000000e+00	1465/1497 (97%)
EPI435840	A/mallard/Alberta/152/2006 (A/H1N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328644	A/mallard/California/11032/2008 (A/H0N8) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328589	A/northern shoveler/California/9235/2008 (A/H10N8) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328075	A/northern shoveler/California/9781/2008 (A/H1N3) segment 5 (NP)	2582.7	0.000000e+00	1465/1498 (97%)
EPI290714	A/northern shoveler/Washington/44249-752/2006 (A/H7N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI290706	A/northern shoveler/Washington/44249-749/2006 (A/H7N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI442357	A/greater white-fronted goose/Alaska/44049-046/2006 (A/H5N2) segment 5 (NP)	2577.2	0.000000e+00	1463/1497 (97%)
EPI286140	A/white front goose/Alaska//445210/2006 (A/H5N2) segment 5 (NP)	2577.2	0.000000e+00	1463/1497 (97%)
EPI280601	A/white front goose/Alaska/477003/2007 (A/H5N2) segment 5 (NP)	2571.7	0.000000e+00	1462/1497 (97%)
EPI280585	A/tundra swan/Alaska/442960/2006 (A/H5N2) segment 5 (NP)	2571.7	0.000000e+00	1462/1497 (97%)
EPI292417	A/American green-winged teal/California/44287-305/2007 (A/H7N6) segment 5 (NP)	2566.1	0.000000e+00	1461/1497 (97%)
EPI290661	A/American green-winged teal/California/28228/2007 (A/H7N6) segment 5 (NP)	2566.1	0.000000e+00	1461/1497 (97%)
EPI292804	A/northern shoveler/California/JN770/2006 (A/H10N3) segment 5 (NP)	2564.3	0.000000e+00	1454/1487 (97%)
EPI442383	A/tundra swan/Alaska/44049-168/2006 (A/H5N2) segment 5 (NP)	2562.4	0.000000e+00	1457/1492 (97%)
EPI343451	A/mallard/Alberta/190/2006 (A/H0) segment 5 (NP)	2560.6	0.000000e+00	1460/1497 (97%)
EPI241717	A/mallard/Alberta/11513/2005 (A/H0) segment 5 (NP)	2560.6	0.000000e+00	1460/1497 (97%)
EPI689675	A/blue winged teal/Missouri/A00624484/2008 (A/H7N3) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI689668	A/blue winged teal/Missouri/A00624483/2008 (A/H7N3) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI475399	A/pintail/Alberta/68/2005 (A/H1N1) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI437289	A/blue-winged teal/Alberta/405/2008 (A/H10N7) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI435791	A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI468371	A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI455875	A/mallard/Minnesota/Sg-00630/2008 (A/H10N7) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI449918	A/mallard/Minnesota/AI09-3819/2009 (A/H0) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI435805	A/mallard/Alberta/257/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI435798	A/mallard/Alberta/240/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI334118	A/mallard/Illinois/3747/2009 (A/H6N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI327273	A/mallard/Alberta/11393/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI280481	A/waterfowl/Colorado/443593/2006 (A/H5N2) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI503530	A/wild bird/Chile/1805/2008 (A/H5N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI450032	A/mallard/Arkansas/AI09-5761/2009 (A/H2N3) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI449854	A/northern pintail/Minnesota/AI09-3254/2009 (A/H6N2) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI333933	A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI298301	A/blue-winged teal/Minnesota/Sg-00201/2007 (A/H4N6) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI222304	A/mallard/Manitoba/23912/2007 (A/H4N7) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI131965	A/mallard/Missouri/209/2006 (A/H11N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI442354	A/greater white-fronted goose/Alaska/44065-031/2006 (A/H5N2) segment 5 (NP)	2542.1	0.000000e+00	1446/1481 (97%)
EPI689730	A/domestic duck/West Virginia/A00140913/2008 (A/H7N3) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452222	A/northern pintail/Interior Alaska/9BM7882R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452145	A/northern pintail/Interior Alaska/9BM11643R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452004	A/northern pintail/Interior Alaska/9BM6510R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI436946	A/northern pintail/Interior Alaska/9BM8109R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI407675	A/northern shoveler/Interior Alaska/9BM1447R2/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI403274	A/northern pintail/Alberta/3/2009 (A/H0) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI334203	A/northern shoveler/Mississippi/236/2010 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI333733	A/northern shovelerMissouri/196/2009 (A/H10N3) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299510	A/American green-winged teal/Illinois/08OS2713/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299502	A/mallard/Illinois/08OS2711/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299398	A/mallard/Illinois/08OS2710/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI290800	A/mallard/Washington/44338-195/2007 (A/H12N5) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI227450	A/redhead/Alberta/11817/2005 (A/H4N6) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI220550	A/green winged teal/California/AKS1305/2008 (A/H11N9) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI700493	A/mallard/Interior Alaska/11ML00058/2011 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI699583	A/mallard/Interior Alaska/11BM03577/2011 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI689742	A/domestic duck/West Virginia/A00140915/2008 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI689723	A/domestic duck/West Virginia/A00140912/2008 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI455976	A/mallard/Minnesota/Sg-01005/2008 (A/H0) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI452124	A/northern pintail/Interior Alaska/9BM11409R0/2009 (A/H12N5) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI450045	A/northern shoveler/Arkansas/AI09-6012/2009 (A/H10N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI448675	A/blue-winged teal/North Dakota/Sg-00740/2008 (A/H3N8) segment 5 (NP)	2532.9	0.000000e+00	1456/1498 (97%)
EPI436979	A/northern pintail/Interior Alaska/9BM8967R0/2009 (A/H8N4) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI433101	A/American green-winged teal/Interior Alaska/9BM5045R0/2009 (A/H8N4) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI415985	A/northern pintail/Interior Alaska/10BM02549R0 (A/H0) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI413412	A/mallard/Ohio/10OS1319/2010 (A/H4N6) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI327859	A/mallard/California/6768/2009 (A/H1N1) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI299558	A/environment/Indiana/08OS3524/2008 (A/H1N2) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI299486	A/mallard/Illinois/08OS2315/2008 (A/H4N6) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI292689	A/American green-winged teal/California/44363-067/2007 (A/H11N9) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI280841	A/mallard/Oregon/461067-2/2006 (A/H5N2) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI230699	A/mallard/California/K752/2006 (A/H10N7) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI690027	A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI616825	A/mallard/Minnesota/AI07-3433/2007 (A/H7N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI513040	A/mallard/Illinois/11OS5570/2011 (A/H3N8) segment 5 (NP)	2527.3	0.000000e+00	1455/1498 (97%)
EPI512339	A/mallard/Wisconsin/11OS4493/2011 (A/H1N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI455983	A/mallard/Minnesota/Sg-01030/2008 (A/H10N7) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI452018	A/northern pintail/Interior Alaska/9BM7152R2/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI436884	A/mallard/Interior Alaska/9BM10537R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI432856	A/northern shoveler/Interior Alaska/9BM2925R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414327	A/mallard/Interior Alaska/9BM2705R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414305	A/mallard/Interior Alaska/9BM2351R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414290	A/mallard/Interior Alaska/9BM2388R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI387268	A/northern shoveler/California/3628/2011 (A/H10) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI333821	A/lesser scaup/Illinois/4115/2009 (A/H10N7) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI328716	A/mallard/California/8118/2008 (A/H11N9) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)

niman · February 11, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI616385	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 8 (NS)	1520.9	0.000000e+00	833/838 (99%)
EPI418930	A/common goldeneye/Wisconsin/10OS4202/2010 (A/H7N6) segment 8 (NS)	1509.8	0.000000e+00	831/838 (99%)
EPI513052	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 8 (NS)	1498.8	0.000000e+00	829/838 (98%)
EPI512957	A/greater scaup/Wisconsin/11OS5760/2011 (A/H10N2) segment 8 (NS)	1498.8	0.000000e+00	829/838 (98%)
EPI512878	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 8 (NS)	1498.8	0.000000e+00	829/838 (98%)
EPI420191	A/bufflehead/California/3118/2011 (A/H4N8) segment 8 (NS)	1498.8	0.000000e+00	829/838 (98%)
EPI512347	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 8 (NS)	1493.2	0.000000e+00	828/838 (98%)
EPI454969	A/bufflehead/North Carolina/NC6412-125/2005 (A/H4N8) segment 8 (NS)	1408.3	0.000000e+00	812/837 (97%)
EPI87529	A/mallard duck/ALB/25/1985 (A/H4N6) segment 8 (NS)	1352.9	0.000000e+00	804/839 (95%)
EPI342913	A/mallard/Alberta/254/2003 (A/H3N3) segment 8 (NS)	1341.8	0.000000e+00	802/839 (95%)
EPI85990	A/mallard duck/ALB/76/1985 (A/H6N3) segment 8 (NS)	1341.8	0.000000e+00	802/839 (95%)
EPI468275	A/blue winged teal/Louisiana/B228/1986 (A/H1N1) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI453660	A/American green-winged teal/Interior Alaska/10BM08222R0/2010 (A/H3N8) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI453232	A/northern pintail/Interior Alaska/9BM7972R0/2009 (A/H4N6) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI452866	A/American green-winged teal/Interior Alaska/9BM8129R0/2009 (A/H4N6) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI452859	A/northern pintail/Interior Alaska/9BM8119R0/2009 (A/H4N6) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI452760	A/northern pintail/Interior Alaska/9BM11789R0/2009 (A/H3N8) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI452040	A/mallard/Interior Alaska/9BM7216R0/2009 (A/H8N4) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI448339	A/blue-winged teal/Louisiana/42B/1987 (A/H2N3) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI333780	A/mallard/Illinois/4179/2009 (A/H11N9) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI120383	A/duck/NJ/7717-70/1995 (A/H1N1) segment 8 (NS)	1336.2	0.000000e+00	802/840 (95%)
EPI88577	A/mallard duck/ALB/763/1983 (A/H11N8) segment 8 (NS)	1336.2	0.000000e+00	802/840 (95%)
EPI87180	A/mallard/ALB/118/1995 (A/H3N5) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI59768	A/mallard/Ohio/399/1987 (A/H11N9) segment 8 (NS)	1336.2	0.000000e+00	801/839 (95%)
EPI486838	A/mallard/California/3310/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486826	A/mallard/California/3223/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486803	A/mallard/California/3174/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486796	A/mallard/California/3172/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486789	A/mallard/California/3171/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486366	A/mallard/California/2997/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486320	A/mallard/California/2885/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486100	A/mallard/California/3435/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI486093	A/mallard/California/3113/2012 (A/H3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI485048	A/mallard/California/3078/2012 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453324	A/northern pintail/Interior Alaska/9BM6095R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453317	A/northern pintail/Interior Alaska/9BM6094R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453310	A/northern pintail/Interior Alaska/9BM6039R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453239	A/mallard/Interior Alaska/9BM10375R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453211	A/northern pintail/Interior Alaska/9BM6145R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI453204	A/northern pintail/Interior Alaska/9BM6040R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI453097	A/mallard/Interior Alaska/9BM12523R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452957	A/northern pintail/Interior Alaska/9BM10835R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452943	A/northern pintail/Interior Alaska/9BM10813R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452908	A/mallard/Interior Alaska/9BM8829R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452901	A/northern pintail/Interior Alaska/9BM8815R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452894	A/northern pintail/Interior Alaska/9BM8803R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452880	A/mallard/Interior Alaska/9BM8471R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI452830	A/northern pintail/Interior Alaska/9BM7632R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452823	A/northern pintail/Interior Alaska/9BM7620R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452795	A/northern pintail/Interior Alaska/9BM12066R1/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452739	A/northern pintail/Interior Alaska/9BM11572R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452704	A/mallard/Interior Alaska/9BM11015R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452683	A/northern pintail/Interior Alaska/9BM10877R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452669	A/mallard/Interior Alaska/9BM10095R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452627	A/northern pintail/Interior Alaska/9BM7254R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI452620	A/northern pintail/Interior Alaska/9BM7252R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI452578	A/mallard/Interior Alaska/9BM6886R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452571	A/northern pintail/Interior Alaska/9BM6494R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452536	A/northern pintail/Interior Alaska/9BM6146R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI452529	A/northern pintail/Interior Alaska/9BM6144R0/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI452284	A/mallard/Interior Alaska/9BM8389R0/2009 (A/H8N4) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI452026	A/mallard/Interior Alaska/9BM7162R0/2009 (A/H8N4) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI451991	A/northern pintail/Interior Alaska/9BM6226R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI449996	A/blue-winged teal/Louisiana/AI09-5159/2009 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI449975	A/American green-winged teal/Texas/AI09-4396/2009 (A/H3N9) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI442305	A/American green-winged teal/Alaska/44419-241/2008 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI437609	A/pintail/Alberta/140/1996 (A/H1N1) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI437079	A/mallard/Interior Alaska/9BM8470R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI437016	A/northern pintail/Interior Alaska/9BM9419R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI436916	A/northern pintail/Interior Alaska/9BM11661R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI432991	A/northern pintail/Interior Alaska/9BM4660R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI432977	A/northern pintail/Interior Alaska/9BM4641R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI432963	A/northern pintail/Interior Alaska/9BM4583R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI432916	A/northern pintail/Interior Alaska/9BM4347R0/2009 (A/H4N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI432843	A/mallard/Interior Alaska/9BM8468R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI432820	A/mallard/Interior Alaska/9BM8469R0/2009 (A/H0) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI401891	A/knot/Delaware Bay/526/1988 (A/H6N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI370946	A/mallard/Alberta/529/1980 (A/H2N3) segment 8 (NS)	1330.7	0.000000e+00	801/840 (95%)
EPI344318	A/mallard/Alberta/85/1994 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI343715	A/pintail/Alberta/166/2003 (A/H3N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI158627	A/mallard/MN/259/1999 (A/H3N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI86234	A/pintail/Alberta/166/2003 (A/H3N6) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI85718	A/knot/DE/526/1988 (A/H6N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI34151	A/wigeon/Ohio/379/1988 (A/H5N2) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI22415	A/pintail/Alberta/156/97 (A/H3N8) segment 8 (NS)	1330.7	0.000000e+00	800/839 (95%)
EPI616925	A/ruddy turnstone/New Jersey/65/1985 (A/H7N3) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI614523	A/American green-winged teal/Wisconsin/12OS2994/2012 (A/H1N1) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI486910	A/mallard/California/3418/2012 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI486782	A/mallard/California/3167/2012 (A/H2N3) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI486732	A/mallard/California/3148/2012 (A/H2N3) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI453153	A/northern pintail/Interior Alaska/9BM9989R0/2009 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI453104	A/northern pintail/Interior Alaska/9BM9447R0/2009 (A/H3N8) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI453090	A/northern shoveler/Interior Alaska/9BM12519R0/2009 (A/H4N8) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452816	A/northern pintail/Interior Alaska/9BM7496R0/2009 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452781	A/northern pintail/Interior Alaska/9BM11915R0/2009 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452613	A/northern pintail/Interior Alaska/9BM7232R0/2009 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452550	A/American green-winged teal/Interior Alaska/9BM6258R0/2009 (A/H4N6) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452494	A/mallard/Interior Alaska/9BM10370R0/2009 (A/H10N7) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452487	A/mallard/Interior Alaska/9BM10369R0/2009 (A/H10N7) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)
EPI452277	A/mallard/Interior Alaska/9BM8287R0/2009 (A/H10N7) segment 8 (NS)	1325.2	0.000000e+00	799/839 (95%)

niman · February 11, 2016

LOCUS       KU585916                1696 bp    cRNA    linear   VRL 10-FEB-2016
DEFINITION  Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8)) segment
            4 hemagglutinin (HA) gene, complete cds.
ACCESSION   KU585916
VERSION     KU585916.1  GI:985701767
KEYWORDS    .
SOURCE      Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8))
  ORGANISM  Influenza A virus (A/turkey/Indiana/16-001574-7/2016(H7N8))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Killian,M.L., Hines,N.L. and Torchetti,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2016) Diagnostic Virology Laboratory, National
            Veterinary Services Laboratories (NVSL), USDA APHIS VS, 1920 Dayton
            Avenue, Ames, IA 50010, USA
COMMENT     GenBank Accession Numbers KU585913-KU585920 represent sequences
            from the 8 segments of Influenza A virus
            (A/turkey/Indiana/16-001574-7/2016(H7N8)).
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. v4
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Influenza A virus
                     (A/turkey/Indiana/16-001574-7/2016(H7N8))"
                     /mol_type="viral cRNA"
                     /strain="A/turkey/Indiana/16-001574-7/2016"
                     /serotype="H7N8"
                     /isolation_source="OP swab; pooled sample"
                     /host="turkey; commercial"
                     /db_xref="taxon:1785959"
                     /segment="4"
                     /country="USA: Dubois County, Indiana"
                     /collection_date="Jan-2016"
                     /note="NVSL 16-001574-7; EP1; LPAI"
     gene            7..1689
                     /gene="HA"
     CDS             7..1689
                     /gene="HA"
                     /function="receptor binding and fusion protein"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="AMD38712.1"
                     /db_xref="GI:985701768"
                     /translation="MNTQILALIACMLIGAKGDKICLGHHAVANGTKVNTLTERGIEV
                     VNATETVETANIKKICTQGKRPTDLGQCGLLGTLIGPPQCDQFLEFDADLIIERREGT
                     DVCYPGKFTNKESLRQILRGSGGIDKESMGFTYSGIRTNGATSACRRSGSSFYAEMKW
                     LLSNSDNAAFPQMTKSYRNPRSKPALIIWGVHHSGSVTEQTKLYGSGNKLITVGSSKY
                     QQSFTPSPGARPQVNGQSGRIDFHWLLLDPNDTVTFTFNGAFIAPDRASFLRGESLGV
                     QSDVPLDSSCKGDCFHNGGTIVSSLPFQNINPRTVGKCPRYVKQTSLLLATGMRNVPE
                     NPKTRGLFGAIAGFIENGWEGLIDGWYGFRHQNAQGKGTAADYKSTQSAIDQITGKLN
                     RLIDKTNQQFELIDNEFSEIEQQIGNVINWTRDSMTEVWSYNAELLVAMENQHTIDLA
                     DSEMNKLYERVRKQLRENAEEDGTGCFEIFHKCDDQCMESIRNNTYDHTQYRAESLQN
                     RIQIDPVKLSSGYKDIILWFSFGASCFLLLAIAMGLVFICIKNGNMRCTICI"
     sig_peptide     7..60
                     /gene="HA"
     mat_peptide     61..1023
                     /gene="HA"
                     /product="HA1"
     mat_peptide     1024..1686
                     /gene="HA"
                     /product="HA2"
ORIGIN      
        1 tacaaaatga acactcaaat tttggcactc attgcttgta tgctgatcgg agctaaagga
       61 gacaaaatat gtcttgggca ccatgctgtg gcaaatggaa caaaagtgaa cacactaaca
      121 gagagaggaa tcgaagtagt aaatgccaca gaaacggtgg agactgcaaa tattaagaaa
      181 atatgcactc aggggaaaag accaacagat ctgggacaat gcggacttct aggaacccta
      241 ataggacctc cccaatgcga tcaattcctg gagtttgacg ctgatttaat aattgaacgg
      301 agagaaggaa cggatgtgtg ttatcctggg aagttcacaa ataaagaatc actgaggcag
      361 atcctccgag ggtcaggagg aattgataag gaatcaatgg gtttcactta tagtggaata
      421 agaaccaatg gggcaacgag tgcttgcaga agatcaggtt cttccttcta tgcggagatg
      481 aagtggttat tgtcgaattc agacaatgcg gcttttcccc aaatgactaa gtcgtacaga
      541 aatcccagga gcaaaccagc tctaataatt tggggagtgc atcactctgg atcggttact
      601 gaacagacca aactctatgg gagtggaaac aagttgataa cagtaggaag ctcgaaatac
      661 cagcagtcat tcaccccaag cccgggggca cgaccacagg tgaatgggca atcaggaagg
      721 attgattttc attggctact ccttgacccc aacgacacag tgactttcac tttcaatggg
      781 gcattcatag ctcctgacag agcaagtttc cttagagggg agtcactagg agttcaaagt
      841 gacgttcctt tggattctag ttgcaagggg gattgcttcc acaatggagg tacgatagtg
      901 agctcactgc cattccagaa catcaaccct agaacagtgg gaaaatgccc tcgatatgtc
      961 aaacagacaa gcctcctctt ggctacaggg atgaggaacg tcccagagaa ccccaagacc
     1021 agaggtcttt ttggagcgat tgctggattc atagagaatg ggtgggaagg cctcattgat
     1081 ggatggtacg gtttcaggca tcaaaatgca caaggaaaag gtactgcagc tgattacaaa
     1141 agcactcaat ctgcaataga tcagatcaca ggcaaattga atcgtctaat tgacaaaaca
     1201 aatcagcagt ttgaactgat agacaacgaa ttcagtgaaa tagaacaaca gattgggaat
     1261 gtcattaatt ggacacgaga ttcaatgact gaagtatggt cgtataatgc tgaactgctg
     1321 gtagctatgg aaaatcagca cacaatagat cttgcagact cagaaatgaa caaactttac
     1381 gagcgtgtaa ggaaacaact gagggagaat gctgaagagg atgggactgg atgctttgag
     1441 atattccata agtgtgatga tcaatgcatg gagagcataa ggaacaacac ctacgaccat
     1501 acccaataca gagcagagtc attgcagaat agaatacaga tagacccagt gaaactgagt
     1561 agtggataca aagacataat cttatggttt agcttcgggg catcatgttt tcttcttcta
     1621 gccattgcaa tgggattggt cttcatttgc ataaagaatg gaaacatgcg gtgcactatt
     1681 tgtatatagt ttgaga

niman · February 12, 2016

Isolate detail

Isolate name:

A/turkey/Indiana/16-001574-7/2016

Isolate ID:

EPI_ISL_211728

Passage details/history:

Type:

A / H7N8

Lineage:

Sample information

Collection date:

2016-01 (Day unknown)

Host

Turkey

Additional host information:

Domestic status:

Is vaccinated:

Location:

United States

Additional location information:

Health status:

Specimen source:

Strain or commercial product name used for vaccination:

Institute information

Originating lab:

Sample ID given by the sample provider:

Address:

Submitting lab:

Other Database Import

Sample ID given by the submitting laboratory:

Authors:

Killian,M.L.;
Hines,N.L.;
Torchetti,M.

Address:

Publication

In vivo antiviral resistance

Antiviral resistance tested by experimental procedures

Adamantanes:

Unknown

Oseltamivir:

Unknown

Zanamivir:

Unknown

Peramivir:

Unknown

Other:

Unknown

Additional information

Antigenic characterization:

Note:

NVSL 16-001574-7; EP1; LPAI

Sequence

segment	identifier	length	accession #	INSDC
PB2	A/turkey/Indiana/16-001574-7/2016	2287	EPI709581	KU585913
PB1	A/turkey/Indiana/16-001574-7/2016	2290	EPI709582	KU585914
PA	A/turkey/Indiana/16-001574-7/2016	2182	EPI709583	KU585915
HA	A/turkey/Indiana/16-001574-7/2016	1696	EPI709584	KU585916
NP	A/turkey/Indiana/16-001574-7/2016	1524	EPI709585	KU585917
NA	A/turkey/Indiana/16-001574-7/2016	1419	EPI709586	KU585918
MP	A/turkey/Indiana/16-001574-7/2016	987	EPI709587	KU585919
NS	A/turkey/Indiana/16-001574-7/2016	850	EPI709588	KU585920

Submitter information

Submitter:

, EpiFluDB

Submission Date:

2016-01-25

Last modifier:

Pohlmann, Anne (EpiFlu Data Curator)

Last modified:

2016-02-10

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709584	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 4 (HA)	3109.0	0.000000e+00	1683/1683 (100%)
EPI709576	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 4 (HA)	3092.4	0.000000e+00	1680/1683 (99%)
EPI645556	A/blue-winged teal/Iowa/13OS2316/2013 (A/H7N3) segment 4 (HA)	2942.8	0.000000e+00	1653/1683 (98%)
EPI594839	A/mallard/Maryland/13OS3019/2014 (A/H0) segment 4 (HA)	2915.1	0.000000e+00	1648/1683 (97%)
EPI526172	A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 4 (HA)	2909.6	0.000000e+00	1647/1683 (97%)
EPI419496	A/American green-winged teal/Mississippi/11OS247/2011 (A/H0) segment 4 (HA)	2826.5	0.000000e+00	1632/1683 (96%)
EPI413380	A/mallard/Missouri/10MO0551/2010 (A/H7N7) segment 4 (HA)	2804.3	0.000000e+00	1628/1683 (96%)
EPI689616	A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI419540	A/American green-winged teal/Mississippi/11OS259/2011 (A/H0) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI419497	A/American green-winged teal/Mississippi/11OS250/2011 (A/H7N3) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI419085	A/American black duck/Wisconsin/10OS3949/2010 (A/H7N8) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI418762	A/American green-winged teal/Illinois/10OS3368/2010 (A/H7N7) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI418759	A/American green-winged teal/Illinois/10OS3329/2010 (A/H7N7) segment 4 (HA)	2798.8	0.000000e+00	1627/1683 (96%)
EPI616891	A/mallard/Alberta/590/2010 (A/H7N8) segment 4 (HA)	2793.3	0.000000e+00	1626/1683 (96%)
EPI418597	A/northern shoveler/Arkansas/11OS333/2011 (A/H0) segment 4 (HA)	2793.3	0.000000e+00	1626/1683 (96%)
EPI419446	A/northern shoverl/Mississippi/11OS145/2011 (A/H7N9) segment 4 (HA)	2787.7	0.000000e+00	1625/1683 (96%)
EPI419234	A/northern shoveler/Missouri/10OS4750/2010 (A/H7N3) segment 4 (HA)	2787.7	0.000000e+00	1625/1683 (96%)
EPI419498	A/American green-winged teal/Mississippi/11OS255/2011 (A/H7N7) segment 4 (HA)	2782.2	0.000000e+00	1624/1683 (96%)
EPI418570	A/northern shoveler/Arkansas/11OS171/2011 (A/H0) segment 4 (HA)	2782.2	0.000000e+00	1624/1683 (96%)
EPI419184	A/northern shoveler/Missouri/10OS4700/2010 (A/H0) segment 4 (HA)	2776.6	0.000000e+00	1623/1683 (96%)
EPI419181	A/northern shoveler/Missouri/10OS4632/2010 (A/H7N7) segment 4 (HA)	2776.6	0.000000e+00	1623/1683 (96%)
EPI616787	A/blue-winged teal/Texas/AI12-909/2012 (A/H7N1) segment 4 (HA)	2771.1	0.000000e+00	1622/1683 (96%)
EPI419703	A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 4 (HA)	2771.1	0.000000e+00	1622/1683 (96%)
EPI419542	A/northern shoveler/Mississippi/11OS202/2011 (A/H7N7) segment 4 (HA)	2771.1	0.000000e+00	1623/1684 (96%)
EPI419233	A/gadwall/Missouri/10OS4731/2010 (A/H7N3) segment 4 (HA)	2771.1	0.000000e+00	1622/1683 (96%)
EPI689523	A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 4 (HA)	2765.6	0.000000e+00	1621/1683 (96%)
EPI419543	A/northern shoveler/Mississippi/11OS289/2011 (A/H7N3) segment 4 (HA)	2765.6	0.000000e+00	1621/1683 (96%)
EPI299451	A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 4 (HA)	2765.6	0.000000e+00	1621/1683 (96%)
EPI690006	A/northern shoveler/Mississippi/A00602284/2009 (A/H0) segment 4 (HA)	2760.0	0.000000e+00	1620/1683 (96%)
EPI690005	A/northern shoveler/Louisiana/A00557321/2009 (A/H7N3) segment 4 (HA)	2760.0	0.000000e+00	1620/1683 (96%)
EPI689614	A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 4 (HA)	2760.0	0.000000e+00	1620/1683 (96%)
EPI512246	A/northern shoveler/Mississippi/12OS231/2012 (A/H0) segment 4 (HA)	2760.0	0.000000e+00	1620/1683 (96%)
EPI487352	A/guinea fowl/Nebraska/17096/2011 (A/H7N9) segment 4 (HA)	2760.0	0.000000e+00	1621/1684 (96%)
EPI487328	A/goose/Nebraska/17097/2011 (A/H7N9) segment 4 (HA)	2760.0	0.000000e+00	1621/1684 (96%)
EPI399915	A/goose/Nebraska/17097-4/2011 (A/H7N9) segment 4 (HA)	2760.0	0.000000e+00	1621/1684 (96%)
EPI299347	A/American green-winged teal/Mississippi/09OS046/2009 (A/H7N7) segment 4 (HA)	2760.0	0.000000e+00	1620/1683 (96%)
EPI690008	A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 4 (HA)	2754.5	0.000000e+00	1619/1683 (96%)
EPI689690	A/bufflehead/Virginia/A00120022/2008 (A/H7N2) segment 4 (HA)	2754.5	0.000000e+00	1619/1683 (96%)
EPI399917	A/guinea fowl/Nebraska/17096-1/2011 (A/H7N9) segment 4 (HA)	2754.5	0.000000e+00	1620/1684 (96%)
EPI689774	A/mallard/New Jersey/A00122457/2008 (A/H7N8) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI616857	A/blue-winged teal/Louisiana/AI11-2911/2011 (A/H7N3) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI616845	A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI512215	A/northern pintail/Mississippi/12OS420/2012 (A/H0) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI512201	A/American green-winged teal/Mississippi/12OS397/2012 (A/H7N7) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI449900	A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI418798	A/American green-winged teal/Illinois/10OS4014/2010 (A/H7N3) segment 4 (HA)	2748.9	0.000000e+00	1618/1683 (96%)
EPI585179	A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 4 (HA)	2743.4	0.000000e+00	1617/1683 (96%)
EPI512431	A/northern shoveler/Illinois/11OS4404/2011 (A/H7N3) segment 4 (HA)	2743.4	0.000000e+00	1618/1684 (96%)
EPI512194	A/northern shoveler/Mississippi/12OS362/2012 (A/H7N7) segment 4 (HA)	2743.4	0.000000e+00	1617/1683 (96%)
EPI512180	A/northern shoveler/Mississippi/12OS347/2012 (A/H7N7) segment 4 (HA)	2743.4	0.000000e+00	1617/1683 (96%)
EPI487317	A/turkey/Minnesota/32710/2011 (A/H7N9) segment 4 (HA)	2743.4	0.000000e+00	1618/1684 (96%)
EPI487309	A/turkey/Minnesota/31900/2011 (A/H7N9) segment 4 (HA)	2743.4	0.000000e+00	1618/1684 (96%)
EPI689773	A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 4 (HA)	2737.9	0.000000e+00	1617/1684 (96%)
EPI689619	A/blue winged teal/South Dakota/A00772794/2009 (A/H7N7) segment 4 (HA)	2737.9	0.000000e+00	1616/1683 (96%)
EPI512299	A/northern shoveler/Arkansas/12OS158/2012 (A/H7N1) segment 4 (HA)	2737.9	0.000000e+00	1616/1683 (96%)
EPI569396	A/blue-winged teal/LA/AI11-2911/2011 (A/H7N3) segment 4 (HA)	2736.0	0.000000e+00	1610/1675 (96%)
EPI689831	A/mallard/New Jersey/A00926089/2010 (A/H7N3) segment 4 (HA)	2732.3	0.000000e+00	1615/1683 (95%)
EPI616382	A/northern shoveler/Illinois/12OS4951/2012 (A/H7N3) segment 4 (HA)	2732.3	0.000000e+00	1615/1683 (95%)
EPI463745	A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 4 (HA)	2728.6	0.000000e+00	1614/1683 (95%)
EPI689769	A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 4 (HA)	2726.8	0.000000e+00	1615/1684 (95%)
EPI689688	A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI689550	A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI689549	A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI689546	A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI434477	A/mallard/Nova Scotia/00372/2010 (A/H7N7) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI434430	A/American black duck/New Brunswick/00344/2010 (A/H7N7) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI418896	A/common goldeneye/Wisconsin/10OS4202/2010 (A/H7N6) segment 4 (HA)	2726.8	0.000000e+00	1614/1683 (95%)
EPI689707	A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 4 (HA)	2721.2	0.000000e+00	1613/1683 (95%)
EPI689522	A/American green winged teal/Mississippi/A00468514/2009 (A/H7N7) segment 4 (HA)	2721.2	0.000000e+00	1613/1683 (95%)
EPI526461	A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 4 (HA)	2721.2	0.000000e+00	1613/1683 (95%)
EPI434481	A/green-winged teal/New Brunswick/00392/2010 (A/H7N7) segment 4 (HA)	2721.2	0.000000e+00	1613/1683 (95%)
EPI689547	A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 4 (HA)	2715.7	0.000000e+00	1612/1683 (95%)
EPI616037	A/northern shoveler/Ohio/12OS5539/2012 (A/H7N3) segment 4 (HA)	2704.6	0.000000e+00	1610/1683 (95%)
EPI616030	A/American green-winged teal/Ohio/12OS5538/2012 (A/H7N3) segment 4 (HA)	2699.1	0.000000e+00	1609/1683 (95%)
EPI645360	A/American green-winged teal/Ohio/13OS1769/2013 (A/H7N2) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI645353	A/blue-winged teal/Ohio/13OS1770/2013 (A/H7N3) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI526457	A/blue-winged teal/Ohio/13OS1773/2013 (A/H7N3) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI526270	A/American green-winged teal/Ohio/13OS1777/2013 (A/H7N3) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI487934	A/turkey/Minnesota/20400/2009 (A/H7N9) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI487926	A/turkey/Minnesota/18421/2009 (A/H7N9) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI487918	A/turkey/Minnesota/15591/2009 (A/H7N9) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI487295	A/turkey/Minnesota/14135-2/2009 (A/H7N9) segment 4 (HA)	2688.0	0.000000e+00	1608/1684 (95%)
EPI333728	A/mallard/Missouri/220/2009 (A/H7N3) segment 4 (HA)	2688.0	0.000000e+00	1607/1683 (95%)
EPI690004	A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 4 (HA)	2682.5	0.000000e+00	1607/1684 (95%)
EPI689871	A/mallard/Oklahoma/A00744383/2009 (A/H7N3) segment 4 (HA)	2682.5	0.000000e+00	1606/1683 (95%)
EPI689771	A/mallard/Michigan/A00869519/2009 (A/H7N3) segment 4 (HA)	2682.5	0.000000e+00	1606/1683 (95%)
EPI689739	A/mallard/Illinois/A00325439/2009 (A/H7N3) segment 4 (HA)	2682.5	0.000000e+00	1606/1683 (95%)
EPI414400	A/northern pintail/Interior Alaska/10BM02539R0/2010 (A/H7N3) segment 4 (HA)	2682.5	0.000000e+00	1607/1684 (95%)
EPI690010	A/northern shoveler/Oklahoma/A00744384/2009 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI689838	A/mallard/Oklahoma/A00749161/2009 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI689767	A/mallard/Illinois/A00755320/2009 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI616996	A/mallard/Alberta/192/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1606/1684 (95%)
EPI616983	A/mallard/Alberta/167/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1606/1684 (95%)
EPI487910	A/turkey/Minnesota/14659/2009 (A/H7N9) segment 4 (HA)	2676.9	0.000000e+00	1606/1684 (95%)
EPI487303	A/turkey/Minnesota/31676/2009 (A/H7N9) segment 4 (HA)	2676.9	0.000000e+00	1607/1685 (95%)
EPI451949	A/northern pintail/Interior Alaska/10BM11038R0/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI451921	A/northern pintail/Interior Alaska/10BM11366R0/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI451788	A/northern pintail/Interior Alaska/10BM09481R0/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI451760	A/mallard/Interior Alaska/10BM09539R0/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)
EPI451753	A/mallard/Interior Alaska/10BM09528R0/2010 (A/H7N3) segment 4 (HA)	2676.9	0.000000e+00	1605/1683 (95%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709586	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 6 (NA)	2610.4	0.000000e+00	1413/1413 (100%)
EPI709578	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 6 (NA)	2610.4	0.000000e+00	1413/1413 (100%)
EPI709570	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 6 (NA)	2604.9	0.000000e+00	1412/1413 (99%)
EPI512876	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 6 (NA)	2549.5	0.000000e+00	1402/1413 (99%)
EPI512345	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 6 (NA)	2549.5	0.000000e+00	1402/1413 (99%)
EPI420189	A/bufflehead/California/3118/2011 (A/H4N8) segment 6 (NA)	2549.5	0.000000e+00	1402/1413 (99%)
EPI450000	A/lesser scaup/Louisiana/AI09-5204/2009 (A/H6N8) segment 6 (NA)	2505.2	0.000000e+00	1394/1413 (98%)
EPI334350	A/bufflehead/Illinois/4016/2009 (A/H4N8) segment 6 (NA)	2495.9	0.000000e+00	1391/1411 (98%)
EPI154826	A/bufflehead/California/HKWF205/2007 (A/H4N8) segment 6 (NA)	2460.9	0.000000e+00	1386/1413 (98%)
EPI418544	A/mallard/Wisconsin/10OS3166/2010 (A/H0) segment 6 (NA)	2453.5	0.000000e+00	1384/1412 (98%)
EPI342994	A/mallard/Alberta/507/2008 (A/H3N8) segment 6 (NA)	2449.8	0.000000e+00	1384/1413 (97%)
EPI513050	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 6 (NA)	2436.9	0.000000e+00	1381/1412 (97%)
EPI596199	A/mallard/Maryland/13OS3020/2014 (A/H6N8) segment 6 (NA)	2433.2	0.000000e+00	1381/1413 (97%)
EPI234231	A/blue-winged teal/North Dakota/Sg-00704/2008 (A/H3N8) segment 6 (NA)	2429.5	0.000000e+00	1361/1384 (98%)
EPI526433	A/American green-winged teal/Ohio/13OS2094/2013 (A/H6N8) segment 6 (NA)	2427.6	0.000000e+00	1380/1413 (97%)
EPI615867	A/willet/Peru-CH49/2010 (A/H6N8) segment 6 (NA)	2425.8	0.000000e+00	1379/1412 (97%)
EPI526391	A/American green-winged teal/Ohio/13OS1781/2013 (A/H6N8) segment 6 (NA)	2422.1	0.000000e+00	1379/1413 (97%)
EPI526333	A/American green-winged teal/Ohio/13OS2060/2013 (A/H6N8) segment 6 (NA)	2422.1	0.000000e+00	1379/1413 (97%)
EPI448654	A/blue-winged teal/North Dakota/Sg-00719/2008 (A/H3N8) segment 6 (NA)	2422.1	0.000000e+00	1379/1413 (97%)
EPI234233	A/blue-winged teal/North Dakota/Sg-00707/2008 (A/H4N8) segment 6 (NA)	2420.2	0.000000e+00	1364/1391 (98%)
EPI645418	A/American green-winged teal/Ohio/13OS1840/2013 (A/H6N8) segment 6 (NA)	2416.5	0.000000e+00	1378/1413 (97%)
EPI343441	A/mallard/Alberta/212/2006 (A/H3N8) segment 6 (NA)	2416.5	0.000000e+00	1378/1413 (97%)
EPI227374	A/northern pintail/Alberta/11701/2005 (A/H3N8) segment 6 (NA)	2411.0	0.000000e+00	1377/1413 (97%)
EPI615874	A/egret/Peru-CH50/2010 (A/H6N8) segment 6 (NA)	2407.3	0.000000e+00	1369/1402 (97%)
EPI343677	A/mallard/Alberta/241/2004 (A/H3N8) segment 6 (NA)	2405.5	0.000000e+00	1376/1413 (97%)
EPI298668	A/mallard/Interior Alaska/6MP0951/2006 (A/H3N8) segment 6 (NA)	2405.5	0.000000e+00	1376/1413 (97%)
EPI449527	A/mallard/Minnesota/Sg-00860/2008 (A/H0) segment 6 (NA)	2399.9	0.000000e+00	1376/1414 (97%)
EPI343283	A/mallard/Alberta/28/2007 (A/H3N8) segment 6 (NA)	2399.9	0.000000e+00	1375/1413 (97%)
EPI343275	A/mallard/Alberta/34/2007 (A/H3N8) segment 6 (NA)	2399.9	0.000000e+00	1375/1413 (97%)
EPI343127	A/mallard/Alberta/284/2007 (A/H0) segment 6 (NA)	2399.9	0.000000e+00	1375/1413 (97%)
EPI343043	A/blue-winged teal/Alberta/387/2007 (A/H3N8) segment 6 (NA)	2394.4	0.000000e+00	1374/1413 (97%)
EPI298732	A/mallard/Interior Alaska/6MP0972R1/2006 (A/H3N8) segment 6 (NA)	2394.4	0.000000e+00	1374/1413 (97%)
EPI298636	A/mallard/Interior Alaska/6MP0272/2006 (A/H3N8) segment 6 (NA)	2394.4	0.000000e+00	1374/1413 (97%)
EPI298500	A/green-winged teal/Interior Alaska/6MP0736/2006 (A/H3N8) segment 6 (NA)	2394.4	0.000000e+00	1374/1413 (97%)
EPI343452	A/mallard/Alberta/190/2006 (A/H0) segment 6 (NA)	2388.8	0.000000e+00	1373/1413 (97%)
EPI343291	A/mallard/Alberta/27/2007 (A/H3N8) segment 6 (NA)	2388.8	0.000000e+00	1373/1413 (97%)
EPI221422	A/American green-winged teal/Interior Alaska/4/2007 (A/H3N8) segment 6 (NA)	2388.8	0.000000e+00	1373/1413 (97%)
EPI699696	A/American green-winged teal/Interior Alaska/11BM03897/2011 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI699630	A/American green-winged teal/Interior Alaska/11BM03657/2011 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI299575	A/northern pintail/Interior Alaska/7MP0509/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI299060	A/northern pintail/Interior Alaska/7MP2228/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI296892	A/northern shoveler/Interior Alaska/7MP1765/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI263358	A/mallard/Minnesota/Sg-00064/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI263094	A/blue-winged teal/Minnesota/Sg-00037/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI222187	A/mallard/Interior Alaska/2/2007 (A/H3N8) segment 6 (NA)	2383.3	0.000000e+00	1372/1413 (97%)
EPI234236	A/blue-winged teal/North Dakota/Sg-00719/2008 (A/H3N8) segment 6 (NA)	2379.6	0.000000e+00	1356/1390 (97%)
EPI449681	A/ring-necked duck/Minnesota/Sg-01066/2008 (A/H12N8) segment 6 (NA)	2377.8	0.000000e+00	1372/1414 (97%)
EPI449478	A/mallard/Minnesota/Sg-00824/2008 (A/H0) segment 6 (NA)	2377.8	0.000000e+00	1372/1414 (97%)
EPI343109	A/mallard/Alberta/318/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI342942	A/mallard/Alberta/551/2009 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI299044	A/northern pintail/Interior Alaska/7MP1822/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1372/1414 (97%)
EPI296957	A/American widgeon/Interior Alaska/7MP1707/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI296900	A/northern shoveler/Interior Alaska/7MP0944/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI283597	A/surface water/Minnesota/W07-2241/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263398	A/ring-necked duck/Minnesota/Sg-00069/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263334	A/mallard/Minnesota/Sg-00061/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263262	A/mallard/Minnesota/Sg-00051/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263238	A/mallard/Minnesota/Sg-00048/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263230	A/mallard/Minnesota/Sg-00047/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI263206	A/gadwall/Minnesota/Sg-00044/2007 (A/H3N8) segment 6 (NA)	2377.8	0.000000e+00	1371/1413 (97%)
EPI178641	A/northern shoveler/Interior Alaska/3/2007 (A/H3N8) segment 6 (NA)	2374.1	0.000000e+00	1369/1411 (97%)
EPI595705	A/mallard/Maryland/08OS3097/2008 (A/H10N8) segment 6 (NA)	2372.2	0.000000e+00	1370/1413 (96%)
EPI442452	A/greater white-fronted goose/Alaska/44299-055/2007 (A/H3N8) segment 6 (NA)	2372.2	0.000000e+00	1370/1413 (96%)
EPI299204	A/green-winged teal/Interior Alaska/8BM3706/2008 (A/H0) segment 6 (NA)	2372.2	0.000000e+00	1370/1413 (96%)
EPI299196	A/northern pintail/Interior Alaska/8BM3700/2008 (A/H3N8) segment 6 (NA)	2372.2	0.000000e+00	1370/1413 (96%)
EPI225292	A/mallard/Washington/20010-002/2006 (A/H3N8) segment 6 (NA)	2372.2	0.000000e+00	1370/1413 (96%)
EPI442451	A/greater white-fronted goose/Alaska/44299-054/2007 (A/H3N8) segment 6 (NA)	2370.4	0.000000e+00	1369/1412 (96%)
EPI699131	A/mallard/Interior Alaska/12ML00098/2012 (A/H3N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI450043	A/mallard/Arkansas/AI09-5944/2009 (A/H4N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI449987	A/blue-winged teal/Texas/AI09-4463/2009 (A/H4N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI418513	A/ruddy duck/Wisconsin/10OS3191/2010 (A/H3N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI343315	A/mallard/Alberta/279/2006 (A/H3N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI342923	A/pintail/Alberta/207/1999 (A/H0) segment 6 (NA)	2366.7	0.000000e+00	1370/1414 (96%)
EPI328504	A/bufflehead/California/8522/2008 (A/H4N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI263318	A/mallard/Minnesota/Sg-00059/2007 (A/H3N8) segment 6 (NA)	2366.7	0.000000e+00	1369/1413 (96%)
EPI87760	A/pintail/Alberta/207/1999 (A/H4N8) segment 6 (NA)	2366.7	0.000000e+00	1370/1414 (96%)
EPI450037	A/mallard/Arkansas/AI09-5900/2009 (A/H3N8) segment 6 (NA)	2361.1	0.000000e+00	1368/1413 (96%)
EPI449786	A/mallard/Minnesota/AI09-2571/2009 (A/H3N8) segment 6 (NA)	2361.1	0.000000e+00	1369/1414 (96%)
EPI402982	A/mallard/Alberta/215/1999 (A/H0) segment 6 (NA)	2361.1	0.000000e+00	1369/1414 (96%)
EPI328645	A/mallard/California/11032/2008 (A/H0N8) segment 6 (NA)	2361.1	0.000000e+00	1368/1413 (96%)
EPI526445	A/American green-winged teal/Ohio/13OS2108/2013 (A/H3N8) segment 6 (NA)	2355.6	0.000000e+00	1367/1413 (96%)
EPI526376	A/blue-winged teal/Ohio/13OS2018/2013 (A/H3N8) segment 6 (NA)	2355.6	0.000000e+00	1367/1413 (96%)
EPI449809	A/blue-winged Teal/Minnesota/AI09-2977/2009 (A/H4N8) segment 6 (NA)	2355.6	0.000000e+00	1368/1414 (96%)
EPI448667	A/mallard/North Dakota/Sg-00737/2008 (A/H6N8) segment 6 (NA)	2355.6	0.000000e+00	1368/1414 (96%)
EPI437063	A/northern pintail/Interior Alaska/9BM12153R0/2009 (A/H4N8) segment 6 (NA)	2355.6	0.000000e+00	1367/1413 (96%)
EPI328590	A/northern shoveler/California/9235/2008 (A/H10N8) segment 6 (NA)	2355.6	0.000000e+00	1367/1413 (96%)
EPI290783	A/teal/Oregon/44336-130/2007 (A/H3N8) segment 6 (NA)	2355.6	0.000000e+00	1367/1413 (96%)
EPI290577	A/northern pintail/Oregon/44249-559/2006 (A/H3N8) segment 6 (NA)	2355.6	0.000000e+00	1368/1414 (96%)
EPI290775	A/American green-winged teal/Oregon/44336-124/2007 (A/H3N8) segment 6 (NA)	2353.8	0.000000e+00	1357/1398 (97%)
EPI526340	A/American green-winged teal/Ohio/13OS2106/2013 (A/H3N8) segment 6 (NA)	2350.1	0.000000e+00	1366/1413 (96%)
EPI448479	A/mallard/Minnesota/346256/2000 (A/H0) segment 6 (NA)	2350.1	0.000000e+00	1368/1415 (96%)
EPI387233	A/mallard/California/3188/2010 (A/H6N8) segment 6 (NA)	2350.1	0.000000e+00	1366/1413 (96%)
EPI344280	A/lesser scaup/Alberta/206/1995 (A/H3N8) segment 6 (NA)	2350.1	0.000000e+00	1367/1414 (96%)
EPI298956	A/American wigeon/Interior Alaska/7MP1726/2007 (A/H3N8) segment 6 (NA)	2350.1	0.000000e+00	1366/1413 (96%)
EPI296973	A/mallard/Interior Alaska/7MP1700/2007 (A/H3N8) segment 6 (NA)	2350.1	0.000000e+00	1366/1413 (96%)
EPI238106	A/mallard/Minnesota/448/2000 (A/H3N8) segment 6 (NA)	2350.1	0.000000e+00	1368/1415 (96%)
EPI442450	A/greater white-fronted goose/Alaska/44299-002/2007 (A/H3N8) segment 6 (NA)	2346.4	0.000000e+00	1354/1396 (96%)
EPI512948	A/American green-winged teal/Illinois/11OS4814/2011 (A/H3N8) segment 6 (NA)	2344.5	0.000000e+00	1365/1413 (96%)
EPI238511	A/mallard/Minnesota/190/1999 (A/H3N8) segment 6 (NA)	2344.5	0.000000e+00	1367/1415 (96%)
EPI222337	A/northern pintail/Alaska/7MP0508/2007 (A/H3N8) segment 6 (NA)	2344.5	0.000000e+00	1365/1413 (96%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709587	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI709579	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI709571	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI616384	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI513049	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI512344	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI512875	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI420188	A/bufflehead/California/3118/2011 (A/H4N8) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI689817	A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689575	A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689568	A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689561	A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689548	A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI449999	A/lesser scaup/Louisiana/AI09-5204/2009 (A/H6N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI690043	A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 7 (MP)	1748.1	0.000000e+00	970/982 (98%)
EPI419526	A/American green-winged teal/Mississippi/11OS256/2011 (A/H1N1) segment 7 (MP)	1748.1	0.000000e+00	970/982 (98%)
EPI689700	A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI689645	A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI418971	A/mallard/Wisconsin/10OS3169/2010 (A/H4N9) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI376067	A/mallard/California/1475/2010 (A/H3N8) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI327661	A/mallard/California/1156/2010 (A/H4N6) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI689789	A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI689689	A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI616847	A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449901	A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449736	A/mallard/Minnesota/AI09-1867/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449729	A/mallard/Minnesota/AI09-1854/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449722	A/mallard/Minnesota/AI09-1833/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI435155	A/American black duck/New Brunswick/00867/2010 (A/H5N2) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI398693	A/mallard/California/1154/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI387273	A/mallard/California/1297/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327669	A/mallard/California/1154/2010 (A/H0) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327653	A/mallard/California/1210/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327637	A/mallard/California/1188/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI689833	A/mallard/New York/A00723392/2009 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI689659	A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI689487	A/American black duck/Delaware/A00870108/2010 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512992	A/mallard/Wisconsin/11OS3092/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512985	A/mallard/Wisconsin/11OS3079/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512964	A/mallard/Illinois/11OS5582/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512947	A/American green-winged teal/Illinois/11OS4814/2011 (A/H3N8) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512919	A/mallard/Wisconsin/11OS3106/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476339	A/blue-winged teal/Canada/3240/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476272	A/blue-winged teal/Canada/3241/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476265	A/blue-winged teal/Canada/3239/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476258	A/blue-winged teal/Canada/3237/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476213	A/thick-billed murre/Canada/1871/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476150	A/common eider/Maine/270/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476143	A/mallard/Maine/202/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476123	A/bufflehead/Maine/161/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI449328	A/mallard/Minnesota/Sg-00804/2008 (A/H3N8) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI419167	A/mallard/Wisconsin/10OS3866/2010 (A/H3N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331963	A/blue-winged teal/Guatemala/CIP049-06/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331955	A/blue-winged teal/Guatemala/CIP049-12/2010 (A/H5N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331947	A/blue-winged teal/Guatemala/CIP049-13/2010 (A/H5N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331939	A/blue-winged teal/Guatemala/CIP049-14/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331915	A/blue-winged teal/Guatemala/CIP049-15/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI616449	A/blue-winged teal/Illinois/12OS4788/2012 (A/H1N1) segment 7 (MP)	1725.9	0.000000e+00	966/982 (98%)
EPI463748	A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 7 (MP)	1725.9	0.000000e+00	966/982 (98%)
EPI419062	A/American green-winged teal/Wisconsin/10OS2955/2010 (A/H5N2) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI419055	A/mallard/Wisconsin/10OS2945/2010 (A/H0) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI327629	A/mallard/California/1289/2010 (A/H4N6) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI328420	A/northern pintail/California/6495/2008 (A/H6N1) segment 7 (MP)	1714.8	0.000000e+00	964/982 (98%)
EPI699389	A/American green-winged teal/Interior Alaska/11BM00293/2011 (A/H10N5) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI699370	A/American green-winged teal/Interior Alaska/11BM00304/2011 (A/H10N5) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI512209	A/American green-winged teal/Mississippi/12OS405/2012 (A/H10N7) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI420253	A/mallard/California/3569/2010 (A/H1N3) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI328317	A/mallard/California/6420/2008 (A/H6N2) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI299195	A/northern pintail/Interior Alaska/8BM3700/2008 (A/H3N8) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI220470	A/env/California/7279/2008 (A/H2N3) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI159708	A/turkey/CA/358533/2005 (A/H4N8) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI645489	A/American green-winged teal/Wisconsin/13OS3465/2013 (A/H6N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI616170	A/blue-winged teal/Ohio/12OS2138/2012 (A/H10N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI512233	A/mallard/Arkansas/12OS184/2012 (A/H10N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI454938	A/ruddy turnstone/New Jersey/AI06-582/2006 (A/H6N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI450079	A/red-necked grebe/Minnesota/AI10-2530/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI450071	A/red-necked grebe/Minnesota/AI10-2529/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI442481	A/spectacled eider/Alaska/44173-055/2006 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI419704	A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI418727	A/American green-winged teal/Wisconsin/10OS2767/2010 (A/H6N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI376081	A/northern shoveler/California/3185/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI369979	A/mallard/Alberta/297/2007 (A/H2N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI334380	A/mallard/Illinois/3048/2009 (A/H11N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI333743	A/northern shovelerMissouri/141/2009 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI333607	A/American green-winged teal/Mississippi/404/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI300071	A/northern pintail/Interior Alaska/8BM3696/2008 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI300064	A/northern shoveler/Interior Alaska/8BM3671/2008 (A/H4N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299727	A/northern pintail/Interior Alaska/8BM3723/2008 (A/H4N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299452	A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299203	A/green-winged teal/Interior Alaska/8BM3706/2008 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299027	A/duck/Interior Alaska/7MP1582/2007 (A/H1N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI298340	A/blue-winged teal/Louisiana/Sg-00189/2007 (A/H3N6) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI292834	A/bufflehead/California/JN1016/2006 (A/H2N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI290758	A/American green-winged teal/California/44287-395/2007 (A/H8N3) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI290696	A/northern shoveler/Washington/44249-731/2006 (A/H10N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI280527	A/mallard/Idaho/455398-2/2006 (A/H5N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI280519	A/mallard/Washington/456277-7/2006 (A/H5N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI263207	A/gadwall/Minnesota/Sg-00044/2007 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI225343	A/pintail/Alberta/21/2006 (A/H1N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI220501	A/env/California/7335/2008 (A/H2N3) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709581	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 1 (PB2)	4211.5	0.000000e+00	2280/2280 (100%)
EPI709573	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI709565	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI616237	A/blue-winged teal/Ohio/12OS2106/2012 (A/H4N6) segment 1 (PB2)	4073.0	0.000000e+00	2255/2280 (98%)
EPI418607	A/northern shoveler/Arkansas/11OS333/2011 (A/H0) segment 1 (PB2)	4039.7	0.000000e+00	2249/2280 (98%)
EPI263193	A/blue-winged teal/Texas/Sg-00081/2007 (A/H4N6) segment 1 (PB2)	4039.7	0.000000e+00	2249/2280 (98%)
EPI512780	A/mallard/Wisconsin/11OS3407/2011 (A/H4N9) segment 1 (PB2)	4028.7	0.000000e+00	2247/2280 (98%)
EPI298321	A/mallard/Minnesota/Sg-00220/2007 (A/H6N1) segment 1 (PB2)	4028.7	0.000000e+00	2247/2280 (98%)
EPI513061	A/mallard/Wisconsin/11OS3577/2011 (A/H6N5) segment 1 (PB2)	4023.1	0.000000e+00	2246/2280 (98%)
EPI513029	A/blue-winged teal/Iowa/44555-551/2011 (A/H3N2) segment 1 (PB2)	4023.1	0.000000e+00	2246/2280 (98%)
EPI403280	A/northern pintail/Alberta/3/2009 (A/H0) segment 1 (PB2)	4023.1	0.000000e+00	2246/2280 (98%)
EPI449885	A/blue-winged Teal/Minnesota/AI09-3575/2009 (A/H4N8) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI449783	A/mallard/Minnesota/AI09-2519/2009 (A/H3N6) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI435864	A/mallard/Alberta/91/2007 (A/H1N5) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI334157	A/American green-winged teal/Illinois/3053/2009 (A/H0) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI327703	A/mallard/California/5351/2009 (A/H1N1) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI298202	A/mallard/Minnesota/Sg-00214/2007 (A/H6N1) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI298138	A/mallard/Minnesota/Sg-00182/2007 (A/H6N1) segment 1 (PB2)	4017.6	0.000000e+00	2246/2281 (98%)
EPI284098	A/green-winged teal/Minnesota/Sg-00197/2007 (A/H6N8) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI263185	A/blue-winged teal/Texas/Sg-00080/2007 (A/H4N6) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI263145	A/blue-winged teal/Texas/Sg-00075/2007 (A/H4N6) segment 1 (PB2)	4017.6	0.000000e+00	2245/2280 (98%)
EPI333581	A/mallard/Mississippi/413/2010 (A/H1N1) segment 1 (PB2)	4012.0	0.000000e+00	2244/2280 (98%)
EPI298122	A/mallard/Minnesota/Sg-00167/2007 (A/H6N1) segment 1 (PB2)	4012.0	0.000000e+00	2238/2271 (98%)
EPI154574	A/northern shoveler/California/HKWF1370/2007 (A/H10N3) segment 1 (PB2)	4012.0	0.000000e+00	2245/2281 (98%)
EPI449997	A/blue-winged teal/Louisiana/AI09-5159/2009 (A/H3N8) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI449964	A/northern pintail/Minnesota/AI09-4322/2009 (A/H3N8) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI449432	A/mallard/Minnesota/Sg-00692/2008 (A/H2N3) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI449285	A/northern pintail/North Dakota/Sg-00749/2008 (A/H0) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI342961	A/northern pintail/Alberta/8/2009 (A/H3N8) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI333769	A/mallard/Illinois/4180/2009 (A/H6N1) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI328351	A/environment/California/7810/2008 (A/H4N6) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI290812	A/mallard/Washington/44338-362/2007 (A/H11N9) segment 1 (PB2)	4006.5	0.000000e+00	2243/2280 (98%)
EPI449412	A/mallard/Minnesota/Sg-00672/2008 (A/H3N8) segment 1 (PB2)	4001.0	0.000000e+00	2242/2280 (98%)
EPI449320	A/blue-winged teal/Minnesota/Sg-00787/2008 (A/H3N8) segment 1 (PB2)	4001.0	0.000000e+00	2242/2280 (98%)
EPI448578	A/mallard/Minnesota/Sg-00571/2008 (A/H0) segment 1 (PB2)	4001.0	0.000000e+00	2242/2280 (98%)
EPI418783	A/American green-winged teal/Illinois/10OS3343/2010 (A/H2N3) segment 1 (PB2)	4001.0	0.000000e+00	2242/2280 (98%)
EPI342989	A/mallard/Alberta/507/2008 (A/H3N8) segment 1 (PB2)	4001.0	0.000000e+00	2242/2280 (98%)
EPI512200	A/northern shoveler/Mississippi/12OS362/2012 (A/H7N7) segment 1 (PB2)	3995.4	0.000000e+00	2241/2280 (98%)
EPI449418	A/mallard/Minnesota/Sg-00674/2008 (A/H3N8) segment 1 (PB2)	3995.4	0.000000e+00	2241/2280 (98%)
EPI448671	A/mallard/North Dakota/Sg-00737/2008 (A/H6N8) segment 1 (PB2)	3995.4	0.000000e+00	2241/2280 (98%)
EPI447990	A/mallard/Arkansas/AI09-5944/2009 (A/H4N8) segment 1 (PB2)	3995.4	0.000000e+00	2241/2280 (98%)
EPI418970	A/mallard/Wisconsin/10OS3144/2010 (A/H6N1) segment 1 (PB2)	3995.4	0.000000e+00	2241/2280 (98%)
EPI616168	A/American green-winged teal/Ohio/12OS2137/2012 (A/H4N6) segment 1 (PB2)	3989.9	0.000000e+00	2241/2281 (98%)
EPI614546	A/blue winged-teal/Wisconsin/12OS4239/2012 (A/H3N2) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI595926	A/mallard/Maryland/09OS254/2009 (A/H1N1) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI512298	A/mallard/Arkansas/12OS140/2012 (A/H11N3) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI512245	A/American green-winged teal/Mississippi/12OS191/2012 (A/H5N3) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI451652	A/mallard/Interior Alaska/10BM07575R0/2010 (A/H7N3) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI449292	A/blue-winged teal/North Dakota/Sg-00750/2008 (A/H4N6) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI420088	A/mallard/California/2584V/2011 (A/H4N9) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI419815	A/mallard/California/2532V/2011 (A/H4N6) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI419659	A/gadwall/Missouri/10MO0280/2010 (A/H5N2) segment 1 (PB2)	3989.9	0.000000e+00	2240/2280 (98%)
EPI333785	A/mallard/Illinois/4162/2009 (A/H11N2) segment 1 (PB2)	3989.9	0.000000e+00	2241/2281 (98%)
EPI435836	A/mallard/Alberta/128/2006 (A/H1N1) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI420129	A/mallard/California/2594V/2011 (A/H4N6) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI420122	A/mallard/California/2594P/2011 (A/H4N6) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI420115	A/mallard/California/2590V/2011 (A/H4N6) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI420081	A/mallard/California/2584P/2011 (A/H4N9) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI418864	A/mallard/Wisconsin/10OS2667/2010 (A/H11N9) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI418826	A/northern shoveler/Illinois/10OS3619/2010 (A/H11N9) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI296761	A/mallard/Alberta/128/2006 (A/H1N1) segment 1 (PB2)	3984.3	0.000000e+00	2239/2280 (98%)
EPI166118	A/mallard/Minnesota/Sg-00169/2007 (A/H3N8) segment 1 (PB2)	3984.3	0.000000e+00	2217/2247 (98%)
EPI298233	A/mallard/Minnesota/Sg-00223/2007 (A/H6N1) segment 1 (PB2)	3982.5	0.000000e+00	2221/2253 (98%)
EPI616314	A/northern shoveler/Illinois/12OS4951/2012 (A/H7N3) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI512342	A/mallard/Wisconsin/11OS4493/2011 (A/H1N3) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI468388	A/mallard/Missouri/466554-14/2007 (A/H1N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI453954	A/mallard/Interior Alaska/10BM11311R0/2010 (A/H3N8) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI449713	A/mallard/Minnesota/AI09-1684/2009 (A/H1N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI449706	A/mallard/Minnesota/AI09-1678/2009 (A/H1N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI449514	A/green-winged teal/Minnesota/Sg-00841/2008 (A/H0) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI449362	A/mallard/Minnesota/SG-00932/2008 (A/H6N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI419143	A/northern shoveler/Mississippi/10OS4526/2010 (A/H6N2) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI419116	A/gadwall/Mississippi/10OS4531/2010 (A/H6N2) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI333881	A/blue-winged teal/Wisconsin/2649/2009 (A/H6N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI299482	A/gadwall/Wisconsin/08OS2296/2008 (A/H6N2) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI188187	A/mallard/Minnesota/Sg-00462/2008 (A/H6N1) segment 1 (PB2)	3978.8	0.000000e+00	2238/2280 (98%)
EPI188713	A/mallard/Minnesota/Sg-00692/2008 (A/H2N3) segment 1 (PB2)	3977.0	0.000000e+00	2225/2261 (98%)
EPI154747	A/mallard duck/Minnesota/Sg-00105/2007 (A/H6N1) segment 1 (PB2)	3977.0	0.000000e+00	2215/2246 (98%)
EPI154715	A/blue-winged teal/Texas/Sg-00081/2007 (A/H4N6) segment 1 (PB2)	3977.0	0.000000e+00	2215/2246 (98%)
EPI689545	A/American green winged teal/Texas/A00586649/2009 (A/H7N3) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI689521	A/American green winged teal/Colorado/A00660616/2008 (A/H7N3) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI442129	A/emperor goose/Alaska/44300-287/2007 (A/H1N2) segment 1 (PB2)	3973.3	0.000000e+00	2224/2261 (98%)
EPI420143	A/mallard/California/2595V/2011 (A/H12N5) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI420136	A/mallard/California/2595P/2011 (A/H12N5) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI419808	A/mallard/California/2531V/2011 (A/H5N1) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI419759	A/northern shoveler/California/2815/2011 (A/H5N2) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI419525	A/American green-winged teal/Mississippi/11OS255/2011 (A/H7N7) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI418556	A/northern pintail/Mississippi/10OS4521/2010 (A/H0) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI413395	A/mallard/Ohio/10OS1470/2010 (A/H3N2) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI413388	A/mallard/Ohio/10OS1469/2010 (A/H3N2) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI387293	A/mallard/California/1335-1/2010 (A/H10) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI387286	A/mallard/California/1335/2010 (A/H10) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI333825	A/gadwall/Illinois/3860/2009 (A/H6N1) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI328854	A/Stellers eider/Alaska/44354-356/2007 (A/H3N6) segment 1 (PB2)	3973.3	0.000000e+00	2215/2247 (98%)
EPI328852	A/Stellers eider/Alaska/44354-353/2007 (A/H3N6) segment 1 (PB2)	3973.3	0.000000e+00	2215/2247 (98%)
EPI328851	A/Stellers eider/Alaska/44354-352/2007 (A/H3N6) segment 1 (PB2)	3973.3	0.000000e+00	2215/2247 (98%)
EPI328528	A/American wigeon/California/8547/2008 (A/H6N1) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI328231	A/mallard/California/8293/2008 (A/H6N1) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI328191	A/mallard/California/8432/2008 (A/H6N1) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)
EPI188155	A/northern pintail/South Dakota/Sg-00454/2008 (A/H6N5) segment 1 (PB2)	3973.3	0.000000e+00	2237/2280 (98%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709582	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 2 (PB1)	4200.4	0.000000e+00	2274/2274 (100%)
EPI709574	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 2 (PB1)	4178.2	0.000000e+00	2270/2274 (99%)
EPI709566	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 2 (PB1)	4178.2	0.000000e+00	2270/2274 (99%)
EPI616386	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 2 (PB1)	4133.9	0.000000e+00	2262/2274 (99%)
EPI512213	A/American green-winged teal/Mississippi/12OS405/2012 (A/H10N7) segment 2 (PB1)	4111.8	0.000000e+00	2258/2274 (99%)
EPI512237	A/mallard/Arkansas/12OS184/2012 (A/H10N7) segment 2 (PB1)	4100.7	0.000000e+00	2256/2274 (99%)
EPI616094	A/northern shoveler/Ohio/12OS5647/2012 (A/H2N3) segment 2 (PB1)	4089.6	0.000000e+00	2254/2274 (99%)
EPI526269	A/American green-winged teal/Ohio/13OS1777/2013 (A/H7N3) segment 2 (PB1)	4078.5	0.000000e+00	2252/2274 (99%)
EPI645359	A/American green-winged teal/Ohio/13OS1769/2013 (A/H7N2) segment 2 (PB1)	4073.0	0.000000e+00	2251/2274 (98%)
EPI645352	A/blue-winged teal/Ohio/13OS1770/2013 (A/H7N3) segment 2 (PB1)	4073.0	0.000000e+00	2251/2274 (98%)
EPI616348	A/American green-winged teal/Mississippi/12OS5061/2012 (A/H5N2) segment 2 (PB1)	4067.4	0.000000e+00	2250/2274 (98%)
EPI526456	A/blue-winged teal/Ohio/13OS1773/2013 (A/H7N3) segment 2 (PB1)	4056.4	0.000000e+00	2249/2275 (98%)
EPI542051	A/mallard/Idaho/ND0002644/2013 (A/H3N8) segment 2 (PB1)	4050.8	0.000000e+00	2247/2274 (98%)
EPI419327	A/mallard/Illinois/10OS4111/2010 (A/H10N7) segment 2 (PB1)	4050.8	0.000000e+00	2247/2274 (98%)
EPI451933	A/mallard/Interior Alaska/10BM11434R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451912	A/northern pintail/Interior Alaska/10BM10906R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451877	A/mallard/Interior Alaska/10BM10811R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451870	A/northern pintail/Interior Alaska/10BM10809R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451863	A/northern pintail/Interior Alaska/10BM10807R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451856	A/northern pintail/Interior Alaska/10BM10805R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451849	A/northern pintail/Interior Alaska/10BM10801R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451826	A/northern pintail/Interior Alaska/10BM10476R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451819	A/mallard/Interior Alaska/10BM10324R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451812	A/northern pintail/Interior Alaska/10BM10166R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451805	A/northern pintail/Interior Alaska/10BM09832R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451798	A/mallard/Interior Alaska/10BM09818R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451793	A/northern pintail/Interior Alaska/10BM09481R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451751	A/northern pintail/Interior Alaska/10BM09348R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451744	A/northern pintail/Interior Alaska/10BM09347R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451709	A/northern pintail/Interior Alaska/10BM08705R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451674	A/mallard/Interior Alaska/10BM08099R0/2010 (A/H0) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451658	A/northern pintail/Interior Alaska/10BM07737R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451644	A/mallard/Interior Alaska/10BM07501R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451637	A/northern pintail/Interior Alaska/10BM07469R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451630	A/northern pintail/Interior Alaska/10BM07458R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451623	A/northern pintail/Interior Alaska/10BM07260R0/2010 (A/H0) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451601	A/northern pintail/Interior Alaska/10BM07114R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451594	A/northern pintail/Interior Alaska/10BM07106R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451587	A/mallard/Interior Alaska/10BM07092R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451580	A/mallard/Interior Alaska/10BM07085R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451454	A/mallard/Interior Alaska/10BM09141R0/2010 (A/H0) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436829	A/mallard/Interior Alaska/10BM06911R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436822	A/mallard/Interior Alaska/10BM06909R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436811	A/mallard/Interior Alaska/10BM06905R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436804	A/northern pintail/Interior Alaska/10BM06899R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436796	A/northern pintail/Interior Alaska/10BM06524R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436666	A/mallard/Interior Alaska/10BM05860R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI436575	A/mallard/Interior Alaska/10BM05347R0/2010 (A/H7N3) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI432814	A/northern pintail/Interior Alaska/10BM06901R0/2010 (A/H0) segment 2 (PB1)	4045.3	0.000000e+00	2246/2274 (98%)
EPI451961	A/mallard/Interior Alaska/10BM12534R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451779	A/mallard/Interior Alaska/10BM09563R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451772	A/mallard/Interior Alaska/10BM09548R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451765	A/mallard/Interior Alaska/10BM09539R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451758	A/mallard/Interior Alaska/10BM09528R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451737	A/northern pintail/Interior Alaska/10BM09181R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451688	A/mallard/Interior Alaska/10BM08120R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451681	A/mallard/Interior Alaska/10BM08100R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451615	A/northern pintail/Interior Alaska/10BM07121R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451608	A/northern pintail/Interior Alaska/10BM07120R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451563	A/mallard/Interior Alaska/10BM07072R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451556	A/mallard/Interior Alaska/10BM07066R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451549	A/northern pintail/Interior Alaska/10BM07029R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI451441	A/northern pintail/Interior Alaska/10BM07267R0/2010 (A/H0) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI436867	A/northern pintail/Interior Alaska/10BM06720R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI436793	A/northern pintail/Interior Alaska/10BM06895R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI436773	A/mallard/Interior Alaska/10BM06838R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI436679	A/northern pintail/Interior Alaska/10BM06306R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI436665	A/northern pintail/Interior Alaska/10BM06303R0/2010 (A/H7N3) segment 2 (PB1)	4039.7	0.000000e+00	2245/2274 (98%)
EPI453953	A/mallard/Interior Alaska/10BM11311R0/2010 (A/H3N8) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI453932	A/mallard/Interior Alaska/10BM10829R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451919	A/northern pintail/Interior Alaska/10BM11208R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451905	A/mallard/Interior Alaska/10BM10876R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451898	A/mallard/Interior Alaska/10BM10861R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451891	A/mallard/Interior Alaska/10BM10859R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451884	A/northern pintail/Interior Alaska/10BM10853R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451842	A/northern pintail/Interior Alaska/10BM10790R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451833	A/mallard/Interior Alaska/10BM10787R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451730	A/mallard/Interior Alaska/10BM08884R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451723	A/mallard/Interior Alaska/10BM08883R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451716	A/mallard/Interior Alaska/10BM08874R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451702	A/northern pintail/Interior Alaska/10BM08586R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451695	A/northern pintail/Interior Alaska/10BM08400R0/2010 (A/H7N3) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI451666	A/northern pintail/Interior Alaska/10BM07821R0/2010 (A/H0) segment 2 (PB1)	4034.2	0.000000e+00	2244/2274 (98%)
EPI616327	A/northern shoveler/Missouri/12OS5755/2012 (A/H10N3) segment 2 (PB1)	4028.7	0.000000e+00	2243/2274 (98%)
EPI451940	A/northern pintail/Interior Alaska/10BM11945R0/2010 (A/H7N3) segment 2 (PB1)	4028.7	0.000000e+00	2243/2274 (98%)
EPI699707	A/mallard/Interior Alaska/11BM03859/2011 (A/H0) segment 2 (PB1)	4017.6	0.000000e+00	2241/2274 (98%)
EPI699570	A/mallard/Interior Alaska/11BM03102/2011 (A/H4N6) segment 2 (PB1)	4012.0	0.000000e+00	2240/2274 (98%)
EPI512982	A/American green-winged teal/Wisconsin/11OS3053/2011 (A/H6N1) segment 2 (PB1)	4012.0	0.000000e+00	2240/2274 (98%)
EPI419688	A/mallard/Missouri/10MO0391/2010 (A/H10N7) segment 2 (PB1)	4012.0	0.000000e+00	2240/2274 (98%)
EPI614557	A/blue winged-teal/Wisconsin/12OS2603/2012 (A/H3N2) segment 2 (PB1)	4006.5	0.000000e+00	2239/2274 (98%)
EPI542045	A/mallard/Idaho/ND0002643/2013 (A/H4N8) segment 2 (PB1)	4006.5	0.000000e+00	2239/2274 (98%)
EPI699448	A/mallard/Interior Alaska/11BM02089/2011 (A/H4N6) segment 2 (PB1)	4001.0	0.000000e+00	2238/2274 (98%)
EPI542057	A/mallard/Idaho/ND0002645/2013 (A/H4N6) segment 2 (PB1)	4001.0	0.000000e+00	2238/2274 (98%)
EPI512733	A/American green-winged teal/Wisconsin/11OS3431/2011 (A/H5N2) segment 2 (PB1)	4001.0	0.000000e+00	2238/2274 (98%)
EPI700085	A/American wigeon/Interior Alaska/11CH00036/2011 (A/H4N6) segment 2 (PB1)	3995.4	0.000000e+00	2237/2274 (98%)
EPI699647	A/mallard/Interior Alaska/11BM03599/2011 (A/H4N6) segment 2 (PB1)	3995.4	0.000000e+00	2237/2274 (98%)
EPI334243	A/mallard/Missouri/350/2009 (A/H11N9) segment 2 (PB1)	3995.4	0.000000e+00	2238/2275 (98%)
EPI700078	A/mallard/Interior Alaska/11CH00019/2011 (A/H4N6) segment 2 (PB1)	3989.9	0.000000e+00	2237/2275 (98%)
EPI699556	A/mallard/Interior Alaska/11BM02987/2011 (A/H2N6) segment 2 (PB1)	3989.9	0.000000e+00	2236/2274 (98%)
EPI542063	A/mallard/Idaho/ND0002646/2013 (A/H4N6) segment 2 (PB1)	3989.9	0.000000e+00	2236/2274 (98%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709583	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 3 (PA)	3973.3	0.000000e+00	2151/2151 (100%)
EPI709575	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 3 (PA)	3967.7	0.000000e+00	2150/2151 (99%)
EPI709567	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 3 (PA)	3967.7	0.000000e+00	2150/2151 (99%)
EPI486916	A/northern pintail/California/2789/2011 (A/H9N2) segment 3 (PA)	3823.7	0.000000e+00	2124/2151 (98%)
EPI549237	A/blue-winged teal/TX/AI12-802/2012 (A/H10N3) segment 3 (PA)	3818.1	0.000000e+00	2123/2151 (98%)
EPI511416	A/mallard/Wisconsin/11OS4368/2011 (A/H11N9) segment 3 (PA)	3807.1	0.000000e+00	2121/2151 (98%)
EPI549236	A/blue-winged teal/TX/AI12-801/2012 (A/H10N3) segment 3 (PA)	3801.5	0.000000e+00	2112/2139 (98%)
EPI584361	A/redhead/Ohio/13OS0406/2013 (A/H7N3) segment 3 (PA)	3796.0	0.000000e+00	2119/2151 (98%)
EPI526250	A/American green-winged teal/Wisconsin/13OS3468/2013 (A/H7N3) segment 3 (PA)	3790.4	0.000000e+00	2118/2151 (98%)
EPI614135	A/American green-winged teal/Ohio/12OS2256/2012 (A/H6N5) segment 3 (PA)	3784.9	0.000000e+00	2117/2151 (98%)
EPI614026	A/American green-winged teal/Wisconsin/12OS2997/2012 (A/H4N6) segment 3 (PA)	3784.9	0.000000e+00	2117/2151 (98%)
EPI343060	A/blue-winged teal/Alberta/378/2007 (A/H0) segment 3 (PA)	3784.9	0.000000e+00	2117/2151 (98%)
EPI343049	A/blue-winged teal/Alberta/380/2007 (A/H0) segment 3 (PA)	3779.4	0.000000e+00	2116/2151 (98%)
EPI526211	A/blue-winged teal/Ohio/13OS2037/2013 (A/H7N1) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI511468	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI345105	A/bufflehead/Alberta/399/2007 (A/H0) segment 3 (PA)	3773.8	0.000000e+00	2115/2151 (98%)
EPI511376	A/greater scaup/Wisconsin/11OS5760/2011 (A/H10N2) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI511371	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 3 (PA)	3768.3	0.000000e+00	2114/2151 (98%)
EPI511430	A/American green-winged teal/Mississippi/11OS5903/2011 (A/H4N6) segment 3 (PA)	3757.2	0.000000e+00	2112/2151 (98%)
EPI614117	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 3 (PA)	3751.7	0.000000e+00	2111/2151 (98%)
EPI511346	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 3 (PA)	3746.1	0.000000e+00	2110/2151 (98%)
EPI614088	A/mallard/Missouri/12OS5759/2012 (A/H11N9) segment 3 (PA)	3735.0	0.000000e+00	2108/2151 (98%)
EPI614017	A/blue winged-teal/Wisconsin/12OS3069/2012 (A/H11N9) segment 3 (PA)	3696.3	0.000000e+00	2101/2151 (97%)
EPI700509	A/mallard/Interior Alaska/11ML00069/2011 (A/H2N3) segment 3 (PA)	3690.7	0.000000e+00	2100/2151 (97%)
EPI227246	A/mallard/Alberta/11527/2005 (A/H3N8) segment 3 (PA)	3685.2	0.000000e+00	2099/2151 (97%)
EPI332987	A/pintail/Alaska/99/2005 (A/H0) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI298663	A/mallard/Interior Alaska/6MP0891/2006 (A/H4N6) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI614217	A/mallard/Alberta/26/2001 (A/H0) segment 3 (PA)	3635.3	0.000000e+00	2090/2151 (97%)
EPI59866	A/green-winged teal/Ohio/1844/2005 (A/H11N9) segment 3 (PA)	3635.3	0.000000e+00	2090/2151 (97%)
EPI49402	A/pintail/Alaska/310/2005 (A/H4N6) segment 3 (PA)	3635.3	0.000000e+00	2090/2151 (97%)
EPI333931	A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 3 (PA)	3629.8	0.000000e+00	2090/2152 (97%)
EPI328225	A/mallard/California/8834/2008 (A/H5N9) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI298535	A/northern pintail/Interior Alaska/6MP0817/2006 (A/H0) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI238090	A/mallard/Minnesota/382/2000 (A/H5N3) segment 3 (PA)	3629.8	0.000000e+00	2089/2151 (97%)
EPI298607	A/green-winged teal/Interior Alaska/6MP1077/2006 (A/H3N8) segment 3 (PA)	3624.2	0.000000e+00	2088/2151 (97%)
EPI159138	A/mallard/MN/479/2000 (A/H5N3) segment 3 (PA)	3624.2	0.000000e+00	2088/2151 (97%)
EPI442231	A/greater white-fronted goose/Alaska/44064-108/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI299803	A/mallard/Interior Alaska/6MP0990R1/2006 (A/H0) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI298759	A/mallard/Interior Alaska/6MP0038BR2/2006 (A/H2N3) segment 3 (PA)	3618.7	0.000000e+00	2087/2151 (97%)
EPI298687	A/mallard/Interior Alaska/6MP0988/2006 (A/H0) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI298647	A/northern pintail/Interior Alaska/6MP0792/2006 (A/H2N3) segment 3 (PA)	3618.7	0.000000e+00	2087/2151 (97%)
EPI298575	A/mallard/Interior Alaska/6MP0992/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI298567	A/mallard/Interior Alaska/6MP0991/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288891	A/mallard/Alaska/44185-044/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288886	A/mallard/Alaska/44187-131/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288885	A/mallard/Alaska/44185-067/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288878	A/mallard/Alaska/44187-129/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288866	A/mallard/Alaska/44187-043/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288857	A/mallard/Alaska/44185-078/2006 (A/H3N2) segment 3 (PA)	3618.7	0.000000e+00	2088/2152 (97%)
EPI288884	A/mallard/Alaska/44185-043/2006 (A/H3N2) segment 3 (PA)	3611.3	0.000000e+00	2086/2152 (96%)
EPI442279	A/emperor goose/Alaska/44323-246/2007 (A/H3N8) segment 3 (PA)	3607.6	0.000000e+00	2085/2151 (96%)
EPI442257	A/emperor goose/Alaska/44063-066/2006 (A/H2N5) segment 3 (PA)	3607.6	0.000000e+00	2085/2151 (96%)
EPI288890	A/mallard/Alaska/44183-124/2006 (A/H2N3) segment 3 (PA)	3607.6	0.000000e+00	2085/2151 (96%)
EPI229634	A/mallard/Maryland/948/2004 (A/H11N9) segment 3 (PA)	3607.6	0.000000e+00	2085/2151 (96%)
EPI442254	A/emperor goose/Alaska/44063-075/2006 (A/H2N5) segment 3 (PA)	3603.9	0.000000e+00	2084/2151 (96%)
EPI614212	A/pintail/Alberta/25/2001 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI442233	A/emperor goose/Alaska/44064-075/2006 (A/H2N5) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI442230	A/brant/Alaska/44063-007/2006 (A/H2N1) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI343802	A/mallard/Alberta/22/2001 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI343794	A/mallard/Alberta/27/2001 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI299763	A/mallard/Interior Alaska/6MP0905/2006 (A/H10N9) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI298767	A/mallard/Interior Alaska/6MP0163AR2/2006 (A/H3N8) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI298671	A/mallard/Interior Alaska/6MP0951/2006 (A/H3N8) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI298639	A/mallard/Interior Alaska/6MP0272/2006 (A/H3N8) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI229642	A/mallard/Maryland/950/2004 (A/H11N9) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI229618	A/mallard/Maryland/922/2004 (A/H11N9) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI229599	A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI229592	A/green-winged teal/Ohio/648/2004 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI172224	A/blue-winged teal/Manitoba/13436/2005 (A/H3N8) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI166788	A/northern pintail/Alaska/44183-123/2006 (A/H2N3) segment 3 (PA)	3602.1	0.000000e+00	2078/2142 (97%)
EPI52155	A/blue-winged teal/Ohio/658/2004 (A/H7N3) segment 3 (PA)	3602.1	0.000000e+00	2084/2151 (96%)
EPI442260	A/emperor goose/Alaska/44063-029/2006 (A/H2N1) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI298735	A/mallard/Interior Alaska/6MP0972R1/2006 (A/H3N8) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI285899	A/northern pintail/California/466371/2006 (A/H5N2) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229650	A/mallard/Maryland/954/2004 (A/H11N9) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI229626	A/mallard/Maryland/926/2004 (A/H11N9) segment 3 (PA)	3596.5	0.000000e+00	2084/2152 (96%)
EPI42054	A/mallard/Alberta/34/2001 (A/H7N1) segment 3 (PA)	3596.5	0.000000e+00	2083/2151 (96%)
EPI442237	A/emperor goose/Alaska/44063-145/2006 (A/H2N1) segment 3 (PA)	3592.9	0.000000e+00	2082/2151 (96%)
EPI614244	A/northern shoveler/North Carolina/1523546/2005 (A/H0) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI298503	A/green-winged teal/Interior Alaska/6MP0736/2006 (A/H3N8) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI60208	A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI59999	A/green-winged teal/Ohio/1324/2005 (A/H4N6) segment 3 (PA)	3591.0	0.000000e+00	2082/2151 (96%)
EPI343337	A/mallard/Alberta/256/2006 (A/H0) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI342991	A/mallard/Alberta/507/2008 (A/H3N8) segment 3 (PA)	3585.5	0.000000e+00	2082/2152 (96%)
EPI275169	A/thick-billed murre/Alaska/44085-040/2006 (A/H10N3) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI80956	A/mallard/Alberta/24/01 (A/H7N3) segment 3 (PA)	3585.5	0.000000e+00	2081/2151 (96%)
EPI475436	A/pintail/Alberta/68/2005 (A/H1N1) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI468612	A/mallard/Alberta/201/1998 (A/H1N1) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI454182	A/American black duck/North Carolina/1321373/2004 (A/H3N2) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI343304	A/mallard/Alberta/297/2006 (A/H4N6) segment 3 (PA)	3579.9	0.000000e+00	2081/2152 (96%)
EPI286504	A/American widgeon/Washington/466769/2006 (A/H5N2) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI229506	A/American black duck/North Carolina/675-075/2004 (A/H3N2) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI178029	A/northern pintail/California/44221-789/2006 (A/H5N2) segment 3 (PA)	3579.9	0.000000e+00	2074/2142 (96%)
EPI159712	A/turkey/CA/358533/2005 (A/H4N8) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI86732	A/mallard/ALB/201/1998 (A/H1N1) segment 3 (PA)	3579.9	0.000000e+00	2080/2151 (96%)
EPI227285	A/mallard/California/GL30/2005 (A/H4N6) segment 3 (PA)	3576.2	0.000000e+00	2080/2152 (96%)
EPI468369	A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI435728	A/pintail/Alberta/69/2005 (A/H1N1) segment 3 (PA)	3574.4	0.000000e+00	2079/2151 (96%)
EPI343356	A/mallard/Alberta/246/2006 (A/H4N6) segment 3 (PA)	3574.4	0.000000e+00	2080/2152 (96%)
EPI343348	A/mallard/Alberta/254/2006 (A/H4N6) segment 3 (PA)	3574.4	0.000000e+00	2080/2152 (96%)

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709585	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI709577	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI709569	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI334349	A/bufflehead/Illinois/4016/2009 (A/H4N8) segment 5 (NP)	2671.4	0.000000e+00	1480/1497 (98%)
EPI419535	A/American green-winged teal/Mississippi/11OS257/2011 (A/H11N9) segment 5 (NP)	2654.8	0.000000e+00	1477/1497 (98%)
EPI418545	A/mallard/Wisconsin/10OS3166/2010 (A/H0) segment 5 (NP)	2654.8	0.000000e+00	1477/1497 (98%)
EPI512266	A/blue-winged teal/Wisconsin/11OS2873/2011 (A/H3N2) segment 5 (NP)	2649.2	0.000000e+00	1476/1497 (98%)
EPI616325	A/northern shoveler/Missouri/12OS5755/2012 (A/H10N3) segment 5 (NP)	2632.6	0.000000e+00	1473/1497 (98%)
EPI328267	A/mallard/California/6957/2008 (A/H10N7) segment 5 (NP)	2632.6	0.000000e+00	1473/1497 (98%)
EPI616165	A/American green-winged teal/Ohio/12OS2137/2012 (A/H4N6) segment 5 (NP)	2627.1	0.000000e+00	1472/1497 (98%)
EPI512884	A/mallard/Wisconsin/11OS4204/2011 (A/H0) segment 5 (NP)	2627.1	0.000000e+00	1472/1497 (98%)
EPI689534	A/American green winged teal/Mississippi/A00630203/2009 (A/H7N6) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI328574	A/northern shoveler/California/9710/2008 (A/H10N7) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI299358	A/northern shoveler/Mississippi/09OS589/2009 (A/H4N6) segment 5 (NP)	2621.5	0.000000e+00	1471/1497 (98%)
EPI333661	A/American green-winged teal/Mississippi/300/2010 (A/H11N9) segment 5 (NP)	2610.4	0.000000e+00	1469/1497 (98%)
EPI690051	A/northern shoveler/Nevada/A00505416/2008 (A/H7N6) segment 5 (NP)	2604.9	0.000000e+00	1469/1498 (98%)
EPI328481	A/green-winged teal/California/10197/2008 (A/H10N7) segment 5 (NP)	2604.9	0.000000e+00	1469/1498 (98%)
EPI645515	A/blue-winged teal/Ohio/13OS2104/2013 (A/H2N3) segment 5 (NP)	2588.3	0.000000e+00	1465/1497 (97%)
EPI178799	A/northern shoveler/California/HKWF392sm/2007 (A/H10N7) segment 5 (NP)	2588.3	0.000000e+00	1465/1497 (97%)
EPI435840	A/mallard/Alberta/152/2006 (A/H1N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328644	A/mallard/California/11032/2008 (A/H0N8) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328589	A/northern shoveler/California/9235/2008 (A/H10N8) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI328075	A/northern shoveler/California/9781/2008 (A/H1N3) segment 5 (NP)	2582.7	0.000000e+00	1465/1498 (97%)
EPI290714	A/northern shoveler/Washington/44249-752/2006 (A/H7N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI290706	A/northern shoveler/Washington/44249-749/2006 (A/H7N3) segment 5 (NP)	2582.7	0.000000e+00	1464/1497 (97%)
EPI442357	A/greater white-fronted goose/Alaska/44049-046/2006 (A/H5N2) segment 5 (NP)	2577.2	0.000000e+00	1463/1497 (97%)
EPI286140	A/white front goose/Alaska//445210/2006 (A/H5N2) segment 5 (NP)	2577.2	0.000000e+00	1463/1497 (97%)
EPI280601	A/white front goose/Alaska/477003/2007 (A/H5N2) segment 5 (NP)	2571.7	0.000000e+00	1462/1497 (97%)
EPI280585	A/tundra swan/Alaska/442960/2006 (A/H5N2) segment 5 (NP)	2571.7	0.000000e+00	1462/1497 (97%)
EPI292417	A/American green-winged teal/California/44287-305/2007 (A/H7N6) segment 5 (NP)	2566.1	0.000000e+00	1461/1497 (97%)
EPI290661	A/American green-winged teal/California/28228/2007 (A/H7N6) segment 5 (NP)	2566.1	0.000000e+00	1461/1497 (97%)
EPI292804	A/northern shoveler/California/JN770/2006 (A/H10N3) segment 5 (NP)	2564.3	0.000000e+00	1454/1487 (97%)
EPI442383	A/tundra swan/Alaska/44049-168/2006 (A/H5N2) segment 5 (NP)	2562.4	0.000000e+00	1457/1492 (97%)
EPI343451	A/mallard/Alberta/190/2006 (A/H0) segment 5 (NP)	2560.6	0.000000e+00	1460/1497 (97%)
EPI241717	A/mallard/Alberta/11513/2005 (A/H0) segment 5 (NP)	2560.6	0.000000e+00	1460/1497 (97%)
EPI689675	A/blue winged teal/Missouri/A00624484/2008 (A/H7N3) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI689668	A/blue winged teal/Missouri/A00624483/2008 (A/H7N3) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI475399	A/pintail/Alberta/68/2005 (A/H1N1) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI437289	A/blue-winged teal/Alberta/405/2008 (A/H10N7) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI435791	A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)	2555.0	0.000000e+00	1459/1497 (97%)
EPI468371	A/pintail/Alberta/69/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI455875	A/mallard/Minnesota/Sg-00630/2008 (A/H10N7) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI449918	A/mallard/Minnesota/AI09-3819/2009 (A/H0) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI435805	A/mallard/Alberta/257/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI435798	A/mallard/Alberta/240/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI334118	A/mallard/Illinois/3747/2009 (A/H6N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI327273	A/mallard/Alberta/11393/2005 (A/H1N1) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI280481	A/waterfowl/Colorado/443593/2006 (A/H5N2) segment 5 (NP)	2549.5	0.000000e+00	1458/1497 (97%)
EPI503530	A/wild bird/Chile/1805/2008 (A/H5N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI450032	A/mallard/Arkansas/AI09-5761/2009 (A/H2N3) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI449854	A/northern pintail/Minnesota/AI09-3254/2009 (A/H6N2) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI333933	A/northern pintail/Wisconsin/4198/2009 (A/H11N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI298301	A/blue-winged teal/Minnesota/Sg-00201/2007 (A/H4N6) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI222304	A/mallard/Manitoba/23912/2007 (A/H4N7) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI131965	A/mallard/Missouri/209/2006 (A/H11N9) segment 5 (NP)	2544.0	0.000000e+00	1457/1497 (97%)
EPI442354	A/greater white-fronted goose/Alaska/44065-031/2006 (A/H5N2) segment 5 (NP)	2542.1	0.000000e+00	1446/1481 (97%)
EPI689730	A/domestic duck/West Virginia/A00140913/2008 (A/H7N3) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452222	A/northern pintail/Interior Alaska/9BM7882R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452145	A/northern pintail/Interior Alaska/9BM11643R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI452004	A/northern pintail/Interior Alaska/9BM6510R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI436946	A/northern pintail/Interior Alaska/9BM8109R0/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI407675	A/northern shoveler/Interior Alaska/9BM1447R2/2009 (A/H8N4) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI403274	A/northern pintail/Alberta/3/2009 (A/H0) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI334203	A/northern shoveler/Mississippi/236/2010 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI333733	A/northern shovelerMissouri/196/2009 (A/H10N3) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299510	A/American green-winged teal/Illinois/08OS2713/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299502	A/mallard/Illinois/08OS2711/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI299398	A/mallard/Illinois/08OS2710/2008 (A/H10N7) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI290800	A/mallard/Washington/44338-195/2007 (A/H12N5) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI227450	A/redhead/Alberta/11817/2005 (A/H4N6) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI220550	A/green winged teal/California/AKS1305/2008 (A/H11N9) segment 5 (NP)	2538.4	0.000000e+00	1456/1497 (97%)
EPI700493	A/mallard/Interior Alaska/11ML00058/2011 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI699583	A/mallard/Interior Alaska/11BM03577/2011 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI689742	A/domestic duck/West Virginia/A00140915/2008 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI689723	A/domestic duck/West Virginia/A00140912/2008 (A/H7N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI455976	A/mallard/Minnesota/Sg-01005/2008 (A/H0) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI452124	A/northern pintail/Interior Alaska/9BM11409R0/2009 (A/H12N5) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI450045	A/northern shoveler/Arkansas/AI09-6012/2009 (A/H10N3) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI448675	A/blue-winged teal/North Dakota/Sg-00740/2008 (A/H3N8) segment 5 (NP)	2532.9	0.000000e+00	1456/1498 (97%)
EPI436979	A/northern pintail/Interior Alaska/9BM8967R0/2009 (A/H8N4) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI433101	A/American green-winged teal/Interior Alaska/9BM5045R0/2009 (A/H8N4) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI415985	A/northern pintail/Interior Alaska/10BM02549R0 (A/H0) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI413412	A/mallard/Ohio/10OS1319/2010 (A/H4N6) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI327859	A/mallard/California/6768/2009 (A/H1N1) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI299558	A/environment/Indiana/08OS3524/2008 (A/H1N2) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI299486	A/mallard/Illinois/08OS2315/2008 (A/H4N6) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI292689	A/American green-winged teal/California/44363-067/2007 (A/H11N9) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI280841	A/mallard/Oregon/461067-2/2006 (A/H5N2) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI230699	A/mallard/California/K752/2006 (A/H10N7) segment 5 (NP)	2532.9	0.000000e+00	1455/1497 (97%)
EPI690027	A/northern pintail/Texas/A00466052/2009 (A/H7N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI616825	A/mallard/Minnesota/AI07-3433/2007 (A/H7N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI513040	A/mallard/Illinois/11OS5570/2011 (A/H3N8) segment 5 (NP)	2527.3	0.000000e+00	1455/1498 (97%)
EPI512339	A/mallard/Wisconsin/11OS4493/2011 (A/H1N3) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI455983	A/mallard/Minnesota/Sg-01030/2008 (A/H10N7) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI452018	A/northern pintail/Interior Alaska/9BM7152R2/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI436884	A/mallard/Interior Alaska/9BM10537R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI432856	A/northern shoveler/Interior Alaska/9BM2925R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414327	A/mallard/Interior Alaska/9BM2705R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414305	A/mallard/Interior Alaska/9BM2351R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%)
EPI414290	A/mallard/Interior Alaska/9BM2388R0/2009 (A/H8N4) segment 5 (NP)	2527.3	0.000000e+00	1454/1497 (97%

niman · February 12, 2016

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI709587	A/turkey/Indiana/16-001574-7/2016 (A/H7N8) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI709579	A/turkey/Indiana/16-001573-2/2016 (A/H7N8) segment 7 (MP)	1803.5	0.000000e+00	980/982 (99%)
EPI709571	A/turkey/Indiana/16-001403-1/2016 (A/H7N8) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI616384	A/bufflehead/Illinois/12OS4798/2012 (A/H0) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI513049	A/bufflehead/Wisconsin/11OS3570/2011 (A/H4N8) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI512344	A/common goldeneye/Wisconsin/11OS4503/2011 (A/H4N8) segment 7 (MP)	1770.2	0.000000e+00	974/982 (99%)
EPI512875	A/common goldeneye/Wisconsin/11OS5764/2011 (A/H4N8) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI420188	A/bufflehead/California/3118/2011 (A/H4N8) segment 7 (MP)	1764.7	0.000000e+00	973/982 (99%)
EPI689817	A/mallard/Nebraska/A00709657/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689575	A/American green winged teal/Texas/A00604814/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689568	A/American green winged teal/Texas/A00604032/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689561	A/American green winged teal/Texas/A00604029/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI689548	A/American green winged teal/Texas/A00604024/2009 (A/H7N3) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI449999	A/lesser scaup/Louisiana/AI09-5204/2009 (A/H6N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI690043	A/northern shoveler/Mississippi/A00682947/2008 (A/H7N7) segment 7 (MP)	1748.1	0.000000e+00	970/982 (98%)
EPI419526	A/American green-winged teal/Mississippi/11OS256/2011 (A/H1N1) segment 7 (MP)	1748.1	0.000000e+00	970/982 (98%)
EPI689700	A/blue winged teal/Texas/A00605473/2009 (A/H7N3) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI689645	A/blue winged teal/Louisiana/A00557206/2009 (A/H7N7) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI418971	A/mallard/Wisconsin/10OS3169/2010 (A/H4N9) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI376067	A/mallard/California/1475/2010 (A/H3N8) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI327661	A/mallard/California/1156/2010 (A/H4N6) segment 7 (MP)	1742.5	0.000000e+00	969/982 (98%)
EPI689789	A/mallard/Iowa/A00558620/2008 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI689689	A/blue winged teal/Texas/A00676566/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI616847	A/blue-winged teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449901	A/blue-winged Teal/North Dakota/AI09-3760/2009 (A/H7N3) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449736	A/mallard/Minnesota/AI09-1867/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449729	A/mallard/Minnesota/AI09-1854/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI449722	A/mallard/Minnesota/AI09-1833/2009 (A/H8N4) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI435155	A/American black duck/New Brunswick/00867/2010 (A/H5N2) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI398693	A/mallard/California/1154/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI387273	A/mallard/California/1297/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327669	A/mallard/California/1154/2010 (A/H0) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327653	A/mallard/California/1210/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI327637	A/mallard/California/1188/2010 (A/H4N6) segment 7 (MP)	1737.0	0.000000e+00	968/982 (98%)
EPI689833	A/mallard/New York/A00723392/2009 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI689659	A/blue winged teal/Minnesota/A00137660/2009 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI689487	A/American black duck/Delaware/A00870108/2010 (A/H7N3) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512992	A/mallard/Wisconsin/11OS3092/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512985	A/mallard/Wisconsin/11OS3079/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512964	A/mallard/Illinois/11OS5582/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512947	A/American green-winged teal/Illinois/11OS4814/2011 (A/H3N8) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI512919	A/mallard/Wisconsin/11OS3106/2011 (A/H3N2) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476339	A/blue-winged teal/Canada/3240/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476272	A/blue-winged teal/Canada/3241/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476265	A/blue-winged teal/Canada/3239/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476258	A/blue-winged teal/Canada/3237/2011 (A/H4N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476213	A/thick-billed murre/Canada/1871/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476150	A/common eider/Maine/270/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476143	A/mallard/Maine/202/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI476123	A/bufflehead/Maine/161/2011 (A/H1N1) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI449328	A/mallard/Minnesota/Sg-00804/2008 (A/H3N8) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI419167	A/mallard/Wisconsin/10OS3866/2010 (A/H3N6) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331963	A/blue-winged teal/Guatemala/CIP049-06/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331955	A/blue-winged teal/Guatemala/CIP049-12/2010 (A/H5N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331947	A/blue-winged teal/Guatemala/CIP049-13/2010 (A/H5N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331939	A/blue-winged teal/Guatemala/CIP049-14/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI331915	A/blue-winged teal/Guatemala/CIP049-15/2010 (A/H8N4) segment 7 (MP)	1731.4	0.000000e+00	967/982 (98%)
EPI616449	A/blue-winged teal/Illinois/12OS4788/2012 (A/H1N1) segment 7 (MP)	1725.9	0.000000e+00	966/982 (98%)
EPI463748	A/mallard/Minnesota/AI09-1714/2009 (A/H7N1) segment 7 (MP)	1725.9	0.000000e+00	966/982 (98%)
EPI419062	A/American green-winged teal/Wisconsin/10OS2955/2010 (A/H5N2) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI419055	A/mallard/Wisconsin/10OS2945/2010 (A/H0) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI327629	A/mallard/California/1289/2010 (A/H4N6) segment 7 (MP)	1720.4	0.000000e+00	965/982 (98%)
EPI328420	A/northern pintail/California/6495/2008 (A/H6N1) segment 7 (MP)	1714.8	0.000000e+00	964/982 (98%)
EPI699389	A/American green-winged teal/Interior Alaska/11BM00293/2011 (A/H10N5) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI699370	A/American green-winged teal/Interior Alaska/11BM00304/2011 (A/H10N5) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI512209	A/American green-winged teal/Mississippi/12OS405/2012 (A/H10N7) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI420253	A/mallard/California/3569/2010 (A/H1N3) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI328317	A/mallard/California/6420/2008 (A/H6N2) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI299195	A/northern pintail/Interior Alaska/8BM3700/2008 (A/H3N8) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI220470	A/env/California/7279/2008 (A/H2N3) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI159708	A/turkey/CA/358533/2005 (A/H4N8) segment 7 (MP)	1709.3	0.000000e+00	963/982 (98%)
EPI645489	A/American green-winged teal/Wisconsin/13OS3465/2013 (A/H6N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI616170	A/blue-winged teal/Ohio/12OS2138/2012 (A/H10N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI512233	A/mallard/Arkansas/12OS184/2012 (A/H10N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI454938	A/ruddy turnstone/New Jersey/AI06-582/2006 (A/H6N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI450079	A/red-necked grebe/Minnesota/AI10-2530/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI450071	A/red-necked grebe/Minnesota/AI10-2529/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI442481	A/spectacled eider/Alaska/44173-055/2006 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI419704	A/American wigeon/Missouri/10MO0530/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI418727	A/American green-winged teal/Wisconsin/10OS2767/2010 (A/H6N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI376081	A/northern shoveler/California/3185/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI369979	A/mallard/Alberta/297/2007 (A/H2N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI334380	A/mallard/Illinois/3048/2009 (A/H11N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI333743	A/northern shovelerMissouri/141/2009 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI333607	A/American green-winged teal/Mississippi/404/2010 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI300071	A/northern pintail/Interior Alaska/8BM3696/2008 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI300064	A/northern shoveler/Interior Alaska/8BM3671/2008 (A/H4N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299727	A/northern pintail/Interior Alaska/8BM3723/2008 (A/H4N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299452	A/northern shoveler/Mississippi/09OS643/2009 (A/H7N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299203	A/green-winged teal/Interior Alaska/8BM3706/2008 (A/H0) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI299027	A/duck/Interior Alaska/7MP1582/2007 (A/H1N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI298340	A/blue-winged teal/Louisiana/Sg-00189/2007 (A/H3N6) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI292834	A/bufflehead/California/JN1016/2006 (A/H2N9) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI290758	A/American green-winged teal/California/44287-395/2007 (A/H8N3) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI290696	A/northern shoveler/Washington/44249-731/2006 (A/H10N7) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI280527	A/mallard/Idaho/455398-2/2006 (A/H5N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI280519	A/mallard/Washington/456277-7/2006 (A/H5N2) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI263207	A/gadwall/Minnesota/Sg-00044/2007 (A/H3N8) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI225343	A/pintail/Alberta/21/2006 (A/H1N1) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)
EPI220501	A/env/California/7335/2008 (A/H2N3) segment 7 (MP)	1703.7	0.000000e+00	962/982 (97%)

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Indiana H7N8 HPAI & LPAI Sequences At Genbank

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