2018 H5N6 Wild Bird Sequences In Dorset England

niman · January 24, 2018

Animal and Plant Health Agency has released full 2018 and late 2017 wild bird sequences from Dorset, United Kingdom.

niman · January 24, 2018

edit	Name	Isolate ID	Subtype	Passage	PB2	PB1	PA	HA	NP	NA	MP	NS	HE	P3	Collection date

Name	Isolate ID	Subtype	Passage	PB2	PB1	PA	HA	NP	NA	MP	NS	HE	P3	Collection date
A/canada_goose/England/AV58_18OPpoolEP1/2018	EPI_ISL_292225	H5N6	Egg Passage 1	2341	2341	2233	1776	1565	1466	1027	890	---	---	2018-01-05
A/pochard_duck/England/AVP_18_003254/2018	EPI_ISL_292224	H5N6	Egg Passage 1	2341	2341	2233	1776	1565	1465	1027	890	---	---	2018-01-10
A/mute_swan/England/AVP_18_001986/2017	EPI_ISL_292223	H5N6	Egg Passage 1	2341	2341	2233	1776	1565	1465	1027	890	---	---	2017-12-31

niman · January 24, 2018

Isolate detail

Isolate name:

A/canada_goose/England/AV58_18OPpoolEP1/2018

Isolate ID:

EPI_ISL_292225

Passage details/history:

Egg Passage 1

Type:

A / H5N6

Lineage:

Sample information

Collection date:

2018-01-05

Host	Branta canadensis

Additional host information:

Domestic status:

Wild

Is vaccinated:

N

Location:

United Kingdom / Dorset

Additional location information:

Abbotsbury

Health status:

Dead

Specimen source:

Oro-pharyngeal swab

Strain or commercial product name used for vaccination:

Institute information

Originating lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the sample provider:

AV-18-003214 and AV-18-003186

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Submitting lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the submitting laboratory:

AV58-18 OP pool 5 EP1

Authors:

Seekings, James;
Ellis, Richard;
Brookes, Sharon M;
Reid, Scott;
Essen, Stephen;
Lewis, Nicola;
Brown, Ian H

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Publication

In vivo antiviral resistance

Antiviral resistance tested by experimental procedures

Adamantanes:

Unknown

Oseltamivir:

Unknown

Zanamivir:

Unknown

Peramivir:

Unknown

Other:

Unknown

Additional information

Antigenic characterization:

Note:

Sequence

segment	identifier	length	accession #
PB2	A/canada_goose/England/AV58_18OPpoolEP1/2018	2341	EPI1144347
PB1	A/canada_goose/England/AV58_18OPpoolEP1/2018	2341	EPI1144348
PA	A/canada_goose/England/AV58_18OPpoolEP1/2018	2233	EPI1144349
HA	A/canada_goose/England/AV58_18OPpoolEP1/2018	1776	EPI1144350
NP	A/canada_goose/England/AV58_18OPpoolEP1/2018	1565	EPI1144351
NA	A/canada_goose/England/AV58_18OPpoolEP1/2018	1466	EPI1144352
MP	A/canada_goose/England/AV58_18OPpoolEP1/2018	1027	EPI1144353
NS	A/canada_goose/England/AV58_18OPpoolEP1/2018	890	EPI1144354

Submitter information

Submitter:

Seekings, James

Submission Date:

2018-01-19

Last modifier:

Seekings, James

Last modified:

2018-01-23

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144350	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 4 (HA)	3147.8	0.000000e+00	1704/1704 (100%)
EPI1144334	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 4 (HA)	3142.3	0.000000e+00	1703/1704 (99%)
EPI1123261	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 4 (HA)	3136.7	0.000000e+00	1702/1704 (99%)
EPI1144342	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1119870	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1119862	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1131096	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 4 (HA)	3125.7	0.000000e+00	1700/1704 (99%)
EPI1123245	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 4 (HA)	3125.7	0.000000e+00	1700/1704 (99%)
EPI1123237	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 4 (HA)	3125.7	0.000000e+00	1700/1704 (99%)
EPI1131088	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 4 (HA)	3086.9	0.000000e+00	1693/1704 (99%)
EPI1019638	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019590	A/Eur_Wig/NL-Reeuwijk/16015903-003/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019582	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019550	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019518	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019510	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI943320	A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019734	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019678	A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019646	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019622	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019606	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019430	A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019406	A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI959413	A/Eurasian Wigeon/Netherlands/4/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI942943	A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019478	A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI1019438	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954583	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI868848	A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI1019630	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019614	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1007675	A/peacock/Belgium/1017/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI990770	A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954877	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954861	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954607	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954575	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954559	A/swan/Italy/17VIR537-2/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI869687	A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA)	3049.9	0.000000e+00	1686/1704 (98%)
EPI1045611	A/chicken/Rostov/44/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019534	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019526	A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI990794	A/greylag goose/Germany-NI/AR1395-L02144/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI969347	A/turkey/Germany-BB/R377ff/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI961449	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI954813	A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI942935	A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI909452	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI909444	A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI869931	A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI869930	A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA)	3044.4	0.000000e+00	1685/1704 (98%)
EPI1019718	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019558	A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019494	A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019398	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1007667	A/chicken/Belgium/807/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI990802	A/greylag goose/Germany-NI/AR703-L02138/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI931145	A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI916604	A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909436	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI859650	A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI907346	A/domestic duck/Germany-BB/R681ff/2017 (A/H5N8) segment 4 (HA)	3038.9	0.000000e+00	1683/1702 (98%)
EPI1021106	A/mute swan/Czech Republic/1296-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019766	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI969254	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI931207	A/turkey/Germany-BB/R234ff/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI909428	A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI909404	A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI909396	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI909388	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI909380	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI888088	A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI869940	A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI869936	A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI861011	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI860401	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI859653	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI859212	A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1040223	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 4 (HA)	3033.3	0.000000e+00	1683/1704 (98%)
EPI909364	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA)	3033.3	0.000000e+00	1683/1704 (98%)
EPI1061371	A/chicken/Belgium/5990/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019878	A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019870	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019862	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019790	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019782	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019774	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019758	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019750	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019726	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019710	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019702	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019670	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019542	A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019446	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019382	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI954783	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI954671	A/Duck/Hungary/1588/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI922508	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144352	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 6 (NA)	2603.0	0.000000e+00	1409/1409 (100%)
EPI1123260	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 6 (NA)	2603.0	0.000000e+00	1409/1409 (100%)
EPI1123244	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 6 (NA)	2597.5	0.000000e+00	1408/1409 (99%)
EPI1123236	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 6 (NA)	2597.5	0.000000e+00	1408/1409 (99%)
EPI1119872	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 6 (NA)	2597.5	0.000000e+00	1408/1409 (99%)
EPI1119864	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 6 (NA)	2597.5	0.000000e+00	1408/1409 (99%)
EPI1144344	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1144336	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1131098	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2571.7	0.000000e+00	1392/1392 (100%)
EPI1131090	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2562.4	0.000000e+00	1397/1402 (99%)
EPI1129918	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2473.8	0.000000e+00	1339/1339 (100%)
EPI1122895	A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 6 (NA)	2453.5	0.000000e+00	1382/1409 (98%)
EPI1122887	A/chicken/Greece/39_2017a/2017 (A/H5N6) segment 6 (NA)	2449.8	0.000000e+00	1381/1409 (98%)
EPI1122879	A/chicken/Greece/39_2017/2017 (A/H5N6) segment 6 (NA)	2449.8	0.000000e+00	1381/1409 (98%)
EPI1129917	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2414.7	0.000000e+00	1317/1322 (99%)
EPI1119073	A/spoonbill/Taiwan/DB645/2017 (A/H5N6) segment 6 (NA)	2409.2	0.000000e+00	1372/1406 (97%)
EPI1127540	A/mute swan/Shimane/3211A001/2017 (A/H5N6) segment 6 (NA)	2403.6	0.000000e+00	1373/1409 (97%)
EPI1011098	A/barnacle goose/Netherlands/2/2014 (A/H3N6) segment 6 (NA)	2392.5	0.000000e+00	1373/1411 (97%)
EPI1036189	A/duck/Moscow/4652/2011 (A/H4N6) segment 6 (NA)	2311.3	0.000000e+00	1358/1411 (96%)
EPI890326	A/mallard duck/Netherlands/19/2012 (A/H4N6) segment 6 (NA)	2292.8	0.000000e+00	1355/1411 (96%)
EPI1036196	A/duck/Moscow/4781/2012 (A/H4N6) segment 6 (NA)	2287.3	0.000000e+00	1354/1411 (95%)
EPI1145199	A/teal/Croatia/86-25/2012 (A/H4N6) segment 6 (NA)	2281.7	0.000000e+00	1353/1411 (95%)
EPI891032	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 6 (NA)	2231.9	0.000000e+00	1345/1412 (95%)
EPI1133993	A/duck/Mongolia/262/2011 (A/H4N6) segment 6 (NA)	2226.3	0.000000e+00	1345/1413 (95%)
EPI823917	A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 6 (NA)	2226.3	0.000000e+00	1345/1413 (95%)
EPI823909	A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 6 (NA)	2226.3	0.000000e+00	1345/1413 (95%)
EPI823901	A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 6 (NA)	2226.3	0.000000e+00	1345/1413 (95%)
EPI823790	A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 6 (NA)	2226.3	0.000000e+00	1345/1413 (95%)
EPI470232	A/duck/Yunnan/87/2007 (A/H7N6) segment 6 (NA)	2226.3	0.000000e+00	1344/1412 (95%)
EPI692466	A/duck/Henan/S1091/2010 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI533781	A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI533775	A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI485322	A/eurasian wigeon/Mongolia/340V/2009 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI692506	A/duck/Hunan/S1012/2009 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI1014700	A/mallard duck/Netherlands/7/2006 (A/H10N6) segment 6 (NA)	2204.2	0.000000e+00	1340/1412 (94%)
EPI692346	A/chicken/Hunan/S1267/2010 (A/H4N6) segment 6 (NA)	2204.2	0.000000e+00	1340/1412 (94%)
EPI692338	A/chicken/Hunan/S1248/2010 (A/H4N6) segment 6 (NA)	2204.2	0.000000e+00	1340/1412 (94%)
EPI414148	A/duck/Jiangsu/4/2010 (A/H3N6) segment 6 (NA)	2204.2	0.000000e+00	1340/1412 (94%)
EPI407862	A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 6 (NA)	2200.5	0.000000e+00	1339/1412 (94%)
EPI372354	A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 6 (NA)	2200.5	0.000000e+00	1340/1412 (94%)
EPI1013418	A/mallard duck/Netherlands/8/2006 (A/H10N6) segment 6 (NA)	2198.6	0.000000e+00	1339/1412 (94%)
EPI395392	A/chicken/India/WB-NIV101006/2009 (A/H4N6) segment 6 (NA)	2198.6	0.000000e+00	1339/1412 (94%)
EPI296530	A/mallard/Netherlands/4/2006 (A/H10N6) segment 6 (NA)	2198.6	0.000000e+00	1339/1412 (94%)
EPI890683	A/mallard duck/Netherlands/6/2006 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI243479	A/duck/Vietnam/OIE-2454/2009 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1339/1413 (94%)
EPI401303	A/duck/Korea/DY104/2007 (A/H4N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI168523	A/common pochard/Aktau/1455/2006 (A/H4N6) segment 6 (NA)	2182.0	0.000000e+00	1337/1413 (94%)
EPI168522	A/coot/Aktau/1454/2006 (A/H4N6) segment 6 (NA)	2176.5	0.000000e+00	1337/1414 (94%)
EPI513237	A/mallard/Sweden/104925/2009 (A/H4N6) segment 6 (NA)	2170.9	0.000000e+00	1335/1413 (94%)
EPI704432	A/duck/Mongolia/769/2015 (A/H4N6) segment 6 (NA)	2165.4	0.000000e+00	1336/1415 (94%)
EPI540366	A/duck/Bangladesh/1521/2009 (A/H4N6) segment 6 (NA)	2165.4	0.000000e+00	1334/1413 (94%)
EPI513749	A/mallard/Sweden/79978/2008 (A/H4N6) segment 6 (NA)	2159.9	0.000000e+00	1332/1412 (94%)
EPI395393	A/chicken/India/WB-NIV101018/2009 (A/H4N6) segment 6 (NA)	2154.3	0.000000e+00	1332/1413 (94%)
EPI513568	A/mallard/Sweden/80348/2008 (A/H0) segment 6 (NA)	2148.8	0.000000e+00	1331/1413 (94%)
EPI485357	A/ruddy shelduck/Mongolia/592/2010 (A/H8N6) segment 6 (NA)	2148.8	0.000000e+00	1331/1413 (94%)
EPI284397	A/mallard/Czech Republic/12652/2007 (A/H4N6) segment 6 (NA)	2148.8	0.000000e+00	1328/1409 (94%)
EPI704293	A/duck/Mongolia/127/2015 (A/H4N6) segment 6 (NA)	2143.2	0.000000e+00	1332/1415 (94%)
EPI704269	A/duck/Mongolia/101/2015 (A/H4N6) segment 6 (NA)	2143.2	0.000000e+00	1332/1415 (94%)
EPI540374	A/duck/Bangladesh/1283/2008 (A/H4N6) segment 6 (NA)	2143.2	0.000000e+00	1331/1414 (94%)
EPI1013677	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI1011235	A/mallard duck/Netherlands/22/2011 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI889824	A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI540358	A/duck/Bangladesh/1766/2010 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1328/1412 (94%)
EPI513170	A/mallard/Sweden/105012/2009 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI965451	A/duck/Bangladesh/26974/2015 (A/H3N6) segment 6 (NA)	2132.2	0.000000e+00	1331/1416 (93%)
EPI618783	A/mallard/Sweden/93475/2009 (A/H10N6) segment 6 (NA)	2132.2	0.000000e+00	1329/1414 (93%)
EPI513546	A/mallard/Sweden/101010/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513461	A/mallard/Sweden/101632/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513454	A/mallard/Sweden/101603/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513433	A/mallard/Sweden/101564/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513431	A/mallard/Sweden/101785/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513415	A/mallard/Sweden/101733/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513408	A/mallard/Sweden/101663/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513394	A/mallard/Sweden/101654/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513358	A/mallard/Sweden/101831/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513341	A/mallard/Sweden/104681/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513230	A/mallard/Sweden/104839/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513163	A/mallard/Sweden/105011/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI470233	A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 6 (NA)	2132.2	0.000000e+00	1327/1412 (93%)
EPI461617	A/duck/Hunan/S11893/2012 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI965498	A/duck/Bangladesh/26920/2015 (A/H3N6) segment 6 (NA)	2126.6	0.000000e+00	1330/1416 (93%)
EPI965369	A/duck/Bangladesh/26948/2015 (A/H3N6) segment 6 (NA)	2126.6	0.000000e+00	1330/1416 (93%)
EPI965295	A/duck/Bangladesh/26918/2015 (A/H3N6) segment 6 (NA)	2126.6	0.000000e+00	1330/1416 (93%)
EPI692554	A/duck/Jiangxi/S2443/2012 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI540382	A/duck/Bangladesh/1784/2010 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1326/1412 (93%)
EPI540350	A/duck/Bangladesh/1783/2010 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1326/1412 (93%)
EPI514901	A/mallard/Sweden/105093/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513514	A/mallard/Sweden/101524/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513507	A/mallard/Sweden/101504/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513493	A/mallard/Sweden/101329/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513475	A/mallard/Sweden/101642/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513468	A/mallard/Sweden/101640/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513424	A/mallard/Sweden/101782/2009 (A/H0) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513386	A/mallard/Sweden/102029/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513379	A/mallard/Sweden/102024/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513334	A/mallard/Sweden/102157/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513327	A/mallard/Sweden/102124/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513320	A/mallard/Sweden/102114/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513306	A/mallard/Sweden/102045/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513244	A/mallard/Sweden/104931/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144353	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1144345	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1144337	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123256	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123240	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123232	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1119865	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1119873	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI1131091	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI1032553	A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032527	A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032519	A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032511	A/Goose/Hungary/59763/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032503	A/Goose/Hungary/17985/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032495	A/Goose/Hungary/17580/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032487	A/Goose/Hungary/17051/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032479	A/Goose/Hungary/15729/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI962050	A/Duck/Hungary/55764/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI962039	A/Duck/Hungary/54738/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI961503	A/turkey/Italy/17VIR1574-1/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI959534	A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI959427	A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI956123	A/Goose/Hungary/59712/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954832	A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954730	A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954722	A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954714	A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954682	A/Mute swan/Hungary/1955/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954650	A/Duck/Hungary/984/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954634	A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954594	A/turkey/Italy/17VIR1338-3/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI953518	A/mallard/Hungary/57857/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI866980	A/duck/Hungary/60441/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI860521	A/goose/Hungary/55128/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI860516	A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI859202	A/mute_swan/Hungary/51049/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1085345	A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI969267	A/chicken/Czech Republic/2644-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI931199	A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI931112	A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI930844	A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI930839	A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI1126346	A/mallard/Czech Republic/136-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1116593	A/mute swan/Czech Republic/54-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1087641	A/chicken/Czech Republic/988-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1032471	A/Goose/Hungary/17261/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI1002886	A/black swan/Germany-BW/R1364/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI975870	A/white stork/Germany-TH/R1149/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI975869	A/tawny owl/Germany-SN/R1186/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	970/980 (98%)
EPI962060	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI961520	A/chicken/Italy/17VIR1751-3/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI961512	A/chicken/Italy/17VIR1684-2/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959558	A/Rook/Hungary/4975/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959526	A/Mute swan/Hungary/6092/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959518	A/Cormorant/Hungary/6102/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959421	A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954864	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954840	A/Mallard/Hungary/5821/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954824	A/Chicken/Hungary/1751/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954746	A/Chicken/Hungary/2496/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954738	A/Mute swan/Hungary/3542/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954706	A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954698	A/Mute swan/Hungary/2193/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954658	A/Goose/Hungary/1030/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954626	A/Mute swan/Hungary/119/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954586	A/turkey/Italy/17VIR973-2/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954534	A/Goose/Hungary/65817/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI869812	A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI859210	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI1127018	A/mallard/Czech Republic/1226-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126383	A/mallard/Czech Republic/1219-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126370	A/mute swan/Czech Republic/987-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126361	A/mute swan/Czech Republic/1156-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126360	A/mute swan/Czech Republic/1155-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126357	A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126351	A/mute swan/Czech Republic/967-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126349	A/mute swan/Czech Republic/572-17_3/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1117249	A/mute swan/Czech Republic/964-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1081897	A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI987885	A/chicken/Republic of Macedonia/AR1167-L02131/2017 (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI969264	A/chicken/Czech Republic/2643-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI969261	A/mute swan/Czech Republic/1813-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961530	A/goose/Czech Republic/821-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961487	A/mute swan/Czech Republic/581-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961481	A/mute swan/Czech Republic/499-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI931196	A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI930842	A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI919638	A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI917482	A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI916524	A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI916387	A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI888279	A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI1032543	A/Goose/Hungary/64909/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI1032535	A/Goose/Hungary/63743/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI1019529	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI961452	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954816	A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954690	A/Turkey/Hungary/2030/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954674	A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954666	A/Duck/Hungary/1588/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144347	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 1 (PB2)	4207.8	0.000000e+00	2280/2280 (100%)
EPI1123242	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 1 (PB2)	4196.7	0.000000e+00	2277/2280 (99%)
EPI1119867	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 1 (PB2)	4196.7	0.000000e+00	2277/2280 (99%)
EPI1119859	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 1 (PB2)	4196.7	0.000000e+00	2277/2280 (99%)
EPI1144339	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1144331	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1131093	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1123258	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1123234	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI889820	A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 1 (PB2)	3908.6	0.000000e+00	2225/2280 (97%)
EPI889594	A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 1 (PB2)	3908.6	0.000000e+00	2225/2280 (97%)
EPI889410	A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 1 (PB2)	3908.6	0.000000e+00	2225/2280 (97%)
EPI890266	A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 1 (PB2)	3886.5	0.000000e+00	2221/2280 (97%)
EPI1010712	A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 1 (PB2)	3875.4	0.000000e+00	2219/2280 (97%)
EPI1014087	A/mallard duck/Georgia/11/2011 (A/H1N1) segment 1 (PB2)	3864.3	0.000000e+00	2217/2280 (97%)
EPI1013538	A/mallard duck/Netherlands/18/2012 (A/H4N2) segment 1 (PB2)	3864.3	0.000000e+00	2217/2280 (97%)
EPI1011210	A/mallard duck/Netherlands/16/2012 (A/H3N2) segment 1 (PB2)	3864.3	0.000000e+00	2217/2280 (97%)
EPI618045	A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 1 (PB2)	3864.3	0.000000e+00	2217/2280 (97%)
EPI889776	A/mallard duck/Netherlands/32/2011 (A/H5N2) segment 1 (PB2)	3858.8	0.000000e+00	2217/2281 (97%)
EPI677988	A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 1 (PB2)	3853.2	0.000000e+00	2215/2280 (97%)
EPI560338	A/Italy/3/2013 (A/H7N7) segment 1 (PB2)	3853.2	0.000000e+00	2215/2280 (97%)
EPI678028	A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 1 (PB2)	3849.5	0.000000e+00	2214/2280 (97%)
EPI678004	A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 1 (PB2)	3849.5	0.000000e+00	2214/2280 (97%)
EPI677996	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3849.5	0.000000e+00	2214/2280 (97%)
EPI678076	A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 1 (PB2)	3847.7	0.000000e+00	2214/2280 (97%)
EPI678060	A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 1 (PB2)	3847.7	0.000000e+00	2214/2280 (97%)
EPI678052	A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 1 (PB2)	3847.7	0.000000e+00	2214/2280 (97%)
EPI678036	A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 1 (PB2)	3847.7	0.000000e+00	2214/2280 (97%)
EPI341793	A/mallard/France/090360/2009 (A/H9N2) segment 1 (PB2)	3847.7	0.000000e+00	2214/2280 (97%)
EPI678012	A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 1 (PB2)	3845.8	0.000000e+00	2213/2280 (97%)
EPI678068	A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 1 (PB2)	3844.0	0.000000e+00	2213/2280 (97%)
EPI891105	A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 1 (PB2)	3842.2	0.000000e+00	2213/2280 (97%)
EPI816828	A/turkey/Poland/14/2013 (A/H9N2) segment 1 (PB2)	3842.2	0.000000e+00	2214/2281 (97%)
EPI678084	A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 1 (PB2)	3842.2	0.000000e+00	2213/2280 (97%)
EPI678044	A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 1 (PB2)	3842.2	0.000000e+00	2213/2280 (97%)
EPI678020	A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 1 (PB2)	3842.2	0.000000e+00	2213/2280 (97%)
EPI678092	A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 1 (PB2)	3840.3	0.000000e+00	2212/2280 (97%)
EPI1013811	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 1 (PB2)	3836.6	0.000000e+00	2213/2281 (97%)
EPI773762	A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 1 (PB2)	3831.1	0.000000e+00	2211/2280 (96%)
EPI617974	A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 1 (PB2)	3825.5	0.000000e+00	2211/2281 (96%)
EPI774511	A/chicken/Netherlands/15007212/15 (A/H10N7) segment 1 (PB2)	3814.5	0.000000e+00	2208/2280 (96%)
EPI718523	A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 1 (PB2)	3808.9	0.000000e+00	2207/2280 (96%)
EPI617882	A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 1 (PB2)	3808.9	0.000000e+00	2207/2280 (96%)
EPI1036183	A/duck/Moscow/4652/2011 (A/H4N6) segment 1 (PB2)	3805.2	0.000000e+00	2206/2280 (96%)
EPI890191	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 1 (PB2)	3803.4	0.000000e+00	2206/2280 (96%)
EPI816836	A/turkey/Poland/08/2014 (A/H9N2) segment 1 (PB2)	3803.4	0.000000e+00	2206/2280 (96%)
EPI816844	A/turkey/Poland/09/2014 (A/H9N2) segment 1 (PB2)	3799.7	0.000000e+00	2205/2280 (96%)
EPI687184	A/chicken/Scotland/532/2016 (A/H5N1) segment 1 (PB2)	3797.8	0.000000e+00	2198/2270 (96%)
EPI1133958	A/duck/Mongolia/27/2011 (A/H3N8) segment 1 (PB2)	3781.2	0.000000e+00	2202/2280 (96%)
EPI890883	A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 1 (PB2)	3770.1	0.000000e+00	2200/2280 (96%)
EPI839725	A/chicken/France/150169a/2015 (A/H5N1) segment 1 (PB2)	3764.6	0.000000e+00	2200/2281 (96%)
EPI1014358	A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 1 (PB2)	3753.5	0.000000e+00	2197/2280 (96%)
EPI174657	A/duck/Hunan/689/2006 (A/H5N1) segment 1 (PB2)	3748.0	0.000000e+00	2196/2280 (96%)
EPI221999	A/environment/Hunan/1-8/2007 (A/H5N1) segment 1 (PB2)	3742.4	0.000000e+00	2195/2280 (96%)
EPI174670	A/chicken/Hunan/3157/2006 (A/H5N1) segment 1 (PB2)	3736.9	0.000000e+00	2195/2281 (96%)
EPI174669	A/chicken/Hubei/3002/2007 (A/H5N1) segment 1 (PB2)	3731.4	0.000000e+00	2193/2280 (96%)
EPI174668	A/duck/Hubei/2911/2007 (A/H5N1) segment 1 (PB2)	3731.4	0.000000e+00	2193/2280 (96%)
EPI174667	A/chicken/Hubei/2856/2007 (A/H5N1) segment 1 (PB2)	3731.4	0.000000e+00	2193/2280 (96%)
EPI174665	A/duck/Hunan/1964/2007 (A/H5N1) segment 1 (PB2)	3731.4	0.000000e+00	2193/2280 (96%)
EPI222147	A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 1 (PB2)	3725.8	0.000000e+00	2192/2280 (96%)
EPI823778	A/environment/Kamchatka/24/2016 (A/H13N8) segment 1 (PB2)	3724.0	0.000000e+00	2192/2280 (96%)
EPI484292	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3722.1	0.000000e+00	2147/2214 (96%)
EPI823762	A/environment/Kamchatka/23/2016 (A/H13N8) segment 1 (PB2)	3720.3	0.000000e+00	2191/2280 (96%)
EPI262682	A/aquatic bird/Korea/w120/2006 (A/H5N2) segment 1 (PB2)	3714.7	0.000000e+00	2191/2281 (96%)
EPI262680	A/aquatic bird/Korea/w113/2006 (A/H5N2) segment 1 (PB2)	3714.7	0.000000e+00	2191/2281 (96%)
EPI173585	A/swine/Korea/C12/2008 (A/H5N2) segment 1 (PB2)	3714.7	0.000000e+00	2191/2281 (96%)
EPI1013684	A/mallard duck/Netherlands/40/2011 (A/H7N1) segment 1 (PB2)	3709.2	0.000000e+00	2190/2281 (96%)
EPI1013496	A/mallard duck/Netherlands/48/2011 (A/H7N1) segment 1 (PB2)	3709.2	0.000000e+00	2190/2281 (96%)
EPI889596	A/mallard duck/Netherlands/8/2012 (A/H1N1) segment 1 (PB2)	3709.2	0.000000e+00	2189/2280 (96%)
EPI839733	A/duck/France/150233/2015 (A/H5N2) segment 1 (PB2)	3709.2	0.000000e+00	2189/2280 (96%)
EPI809271	A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 1 (PB2)	3709.2	0.000000e+00	2190/2281 (96%)
EPI262683	A/aquatic bird/Korea/w121/2006 (A/H5N2) segment 1 (PB2)	3709.2	0.000000e+00	2190/2281 (96%)
EPI1011215	A/mallard duck/Netherlands/45/2011 (A/H8N1) segment 1 (PB2)	3703.7	0.000000e+00	2189/2281 (95%)
EPI890747	A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 1 (PB2)	3703.7	0.000000e+00	2189/2281 (95%)
EPI889269	A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 1 (PB2)	3703.7	0.000000e+00	2189/2281 (95%)
EPI889248	A/mallard duck/Netherlands/43/2011 (A/H7N1) segment 1 (PB2)	3703.7	0.000000e+00	2189/2281 (95%)
EPI839741	A/duck/France/150236/2015 (A/H5N9) segment 1 (PB2)	3703.7	0.000000e+00	2188/2280 (95%)
EPI262681	A/aquatic bird/Korea/w114/2006 (A/H5N2) segment 1 (PB2)	3703.7	0.000000e+00	2189/2281 (95%)
EPI174662	A/duck/Henan/1652/2006 (A/H5N1) segment 1 (PB2)	3698.1	0.000000e+00	2187/2280 (95%)
EPI174660	A/duck/Henan/1647/2006 (A/H5N1) segment 1 (PB2)	3698.1	0.000000e+00	2188/2281 (95%)
EPI961485	A/environment/Kamchatka/117/2016 (A/H13N8) segment 1 (PB2)	3696.3	0.000000e+00	2187/2280 (95%)
EPI940605	A/guinea fowl/France/150207n/2015 (A/H5N9) segment 1 (PB2)	3692.6	0.000000e+00	2187/2281 (95%)
EPI167950	A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 1 (PB2)	3688.9	0.000000e+00	2170/2257 (96%)
EPI222581	A/scaly-breasted munia/Hong Kong/45/2007 (A/H5N1) segment 1 (PB2)	3687.0	0.000000e+00	2175/2265 (96%)
EPI220527	A/environment/Hunan/6-69/2008 (A/H5N1) segment 1 (PB2)	3687.0	0.000000e+00	2185/2280 (95%)
EPI809383	A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 1 (PB2)	3670.4	0.000000e+00	2184/2282 (95%)
EPI1087898	A/ Quail /Egypt/1253V/2016 (A/H9N2) segment 1 (PB2)	3637.2	0.000000e+00	2176/2280 (95%)
EPI1086370	A/Chicken/Egypt/374V/2016 (A/H9N2) segment 1 (PB2)	3637.2	0.000000e+00	2178/2282 (95%)
EPI1006524	A/duck/Guangxi/015D2/2009 (A/H3N2) segment 1 (PB2)	3637.2	0.000000e+00	2176/2280 (95%)
EPI167855	A/crested goshawk/Hong Kong/458/2007 (A/H5N1) segment 1 (PB2)	3631.6	0.000000e+00	2139/2226 (96%)
EPI316548	A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 1 (PB2)	3581.8	0.000000e+00	2166/2280 (95%)
EPI401812	A/green-winged teal/Xianghai/430/2011 (A/H5N2) segment 1 (PB2)	3576.2	0.000000e+00	2165/2280 (94%)
EPI534805	A/duck/Zhejiang/D18/2013 (A/H3N3) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI534804	A/duck/Zhejiang/D17/2013 (A/H3N3) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI534803	A/duck/Zhejiang/D16/2013 (A/H3N3) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI534800	A/duck/Zhejiang/D13/2013 (A/H3N2) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI534799	A/duck/Zhejiang/D11/2013 (A/H3N2) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI469171	A/wild duck/Guangdong/520/2001 (A/H1N9) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI99874	A/duck/Denmark/65047/04 (A/H5N2) segment 1 (PB2)	3570.7	0.000000e+00	2164/2280 (94%)
EPI387373	A/whooper swan/Mongolia/1-21/2007 (A/H3N1) segment 1 (PB2)	3568.8	0.000000e+00	2163/2279 (94%)

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144348	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 2 (PB1)	4196.7	0.000000e+00	2274/2274 (100%)
EPI1144332	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 2 (PB1)	4180.1	0.000000e+00	2271/2275 (99%)
EPI1123259	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 2 (PB1)	4180.1	0.000000e+00	2271/2275 (99%)
EPI1119860	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 2 (PB1)	4180.1	0.000000e+00	2271/2275 (99%)
EPI1144340	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 2 (PB1)	4174.5	0.000000e+00	2270/2275 (99%)
EPI1123235	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 2 (PB1)	4174.5	0.000000e+00	2270/2275 (99%)
EPI1119868	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 2 (PB1)	4174.5	0.000000e+00	2270/2275 (99%)
EPI1131094	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 2 (PB1)	4169.0	0.000000e+00	2269/2275 (99%)
EPI1123243	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 2 (PB1)	4169.0	0.000000e+00	2269/2275 (99%)
EPI1131086	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 2 (PB1)	4119.1	0.000000e+00	2260/2275 (99%)
EPI909458	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1)	4063.7	0.000000e+00	2250/2275 (98%)
EPI909450	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1)	4063.7	0.000000e+00	2250/2275 (98%)
EPI961447	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 2 (PB1)	4058.2	0.000000e+00	2249/2275 (98%)
EPI1117251	A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019844	A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019836	A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019788	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019780	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019724	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019716	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019708	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019692	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019684	A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019652	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019628	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019596	A/Eur_Wig/NL-Terschelling/16015692-010/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019532	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019460	A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019396	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019388	A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019380	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019372	A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI1019364	A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI956130	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI954581	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI922322	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI860495	A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI860390	A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI860234	A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1)	4052.7	0.000000e+00	2248/2275 (98%)
EPI967462	A/domestic duck/Germany-MV/R9764/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2247/2275 (98%)
EPI1044546	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019876	A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019868	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019860	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019852	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019828	A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019820	A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019812	A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019804	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019796	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019772	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019756	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019668	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019660	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019612	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019572	A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019564	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019540	A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019500	A/Eur_Wig/NL-Akkrum/16015817-003/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019484	A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019468	A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019452	A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019420	A/Ch/NL-Hiaure/16016112-001-005/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019412	A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI969252	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI959329	A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI954781	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI909362	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI885204	A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI881281	A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI881276	A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI863863	A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI860398	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI859659	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1)	4047.1	0.000000e+00	2247/2275 (98%)
EPI1019764	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI1019748	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI1019700	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI1019556	A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI1019524	A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI962063	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI954811	A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI954661	A/Goose/Hungary/1030/2017 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI931205	A/chicken/Germany-MV/R10048/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI909426	A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI859205	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 2 (PB1)	4041.6	0.000000e+00	2246/2275 (98%)
EPI869685	A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2245/2275 (98%)
EPI1122891	A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1122875	A/chicken/Greece/39_2017/2017 (A/H5N6) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1032482	A/Goose/Hungary/15729/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019740	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019732	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019644	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019548	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019516	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1019444	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1007673	A/peacock/Belgium/1017/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI1007665	A/chicken/Belgium/807/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI954875	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI954867	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)
EPI954859	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 2 (PB1)	4036.0	0.000000e+00	2245/2275 (98%)

niman · January 24, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144349	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 3 (PA)	3973.3	0.000000e+00	2151/2151 (100%)
EPI1123257	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 3 (PA)	3967.7	0.000000e+00	2150/2151 (99%)
EPI1123241	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 3 (PA)	3967.7	0.000000e+00	2150/2151 (99%)
EPI1119869	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 3 (PA)	3967.7	0.000000e+00	2150/2151 (99%)
EPI1123233	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 3 (PA)	3962.2	0.000000e+00	2149/2151 (99%)
EPI1119861	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 3 (PA)	3962.2	0.000000e+00	2149/2151 (99%)
EPI1144341	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1144333	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1131095	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1019770	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019722	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019706	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019650	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019562	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019442	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019378	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 3 (PA)	3906.8	0.000000e+00	2139/2151 (99%)
EPI1019746	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019690	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019666	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019658	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1044547	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019802	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019794	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019738	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI965226	A/black-tailed godwit/Bangladesh/24734/2015 (A/H7N5) segment 3 (PA)	3738.7	0.000000e+00	2109/2152 (98%)
EPI926008	A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 3 (PA)	3729.5	0.000000e+00	2108/2152 (97%)
EPI926000	A/mallard/Chany/355/2016 (A/H1N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI925992	A/gadwall/Chany/315/2016 (A/H1N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI925984	A/mallard/Chany/313/2016 (A/H1N1) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI965379	A/duck/Bangladesh/24697/2015 (A/H15N9) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI965278	A/duck/Bangladesh/24704/2015 (A/H15N9) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI965237	A/duck/Bangladesh/25891/2015 (A/H4N6) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI963325	A/duck/Bangladesh/24035/2014 (A/H10N1) segment 3 (PA)	3712.9	0.000000e+00	2105/2152 (97%)
EPI614265	A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA)	3712.9	0.000000e+00	2106/2153 (97%)
EPI965322	A/duck/Bangladesh/26918/2015 (A/H3N6) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI446529	A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA)	3696.3	0.000000e+00	2101/2151 (97%)
EPI884265	A/mallard/Chany/126K-2/2014 (A/H8N4) segment 3 (PA)	3690.7	0.000000e+00	2101/2152 (97%)
EPI704339	A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA)	3685.2	0.000000e+00	2100/2152 (97%)
EPI704322	A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA)	3685.2	0.000000e+00	2100/2152 (97%)
EPI476088	A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA)	3679.6	0.000000e+00	2101/2154 (97%)
EPI476065	A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA)	3679.6	0.000000e+00	2101/2154 (97%)
EPI475923	A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA)	3679.6	0.000000e+00	2101/2154 (97%)
EPI1006647	A/Anseriformes/Anhui/L25/2014 (A/H1N1) segment 3 (PA)	3674.1	0.000000e+00	2099/2153 (97%)
EPI965541	A/duck/Bangladesh/27042/2015 (A/H7N9) segment 3 (PA)	3674.1	0.000000e+00	2098/2152 (97%)
EPI965406	A/duck/Bangladesh/26980/2015 (A/H7N9) segment 3 (PA)	3674.1	0.000000e+00	2098/2152 (97%)
EPI925976	A/pintail/Chany/198/2016 (A/H3N8) segment 3 (PA)	3674.1	0.000000e+00	2098/2152 (97%)
EPI925960	A/teal/Chany/135/2016 (A/H3N8) segment 3 (PA)	3674.1	0.000000e+00	2098/2152 (97%)
EPI476086	A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI476085	A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI475922	A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI538458	A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA)	3672.3	0.000000e+00	2080/2126 (97%)
EPI969334	A/wild bird/Korea/SK14/2014 (A/H1N1) segment 3 (PA)	3668.6	0.000000e+00	2098/2153 (97%)
EPI965516	A/duck/Bangladesh/26992/2015 (A/H7N9) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI942184	A/duck/Hubei/ZYSYG15/2015 (A/H6N2) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI942183	A/duck/Hubei/ZYSYG14/2015 (A/H6N2) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI942182	A/duck/Hubei/ZYSYG1/2015 (A/H6N2) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI925968	A/mallard/Chany/185/2016 (A/H3N8) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI692479	A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA)	3668.6	0.000000e+00	2096/2151 (97%)
EPI596393	A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI476087	A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA)	3668.6	0.000000e+00	2099/2154 (97%)
EPI475921	A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA)	3668.6	0.000000e+00	2099/2154 (97%)
EPI336009	A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA)	3668.6	0.000000e+00	2098/2153 (97%)
EPI1006604	A/Anseriformes/Anhui/S3/2014 (A/H1N1) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI895321	A/Anser fabalis/China/Anhui/L144/2014 (A/H6N1) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI895305	A/Anser fabalis/China/Anhui/L63/2014 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI895297	A/Anser fabalis/China/Anhui/L9/2014 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI895281	A/Anser fabalis/China/Anhui/S104/2014 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2098/2154 (97%)
EPI895265	A/Anser fabalis/China/Anhui/S45/2014 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2098/2154 (97%)
EPI441050	A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI418270	A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI222086	A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI222046	A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI1006661	A/Anseriformes/Anhui/L259/2014 (A/H1N1) segment 3 (PA)	3657.5	0.000000e+00	2097/2154 (97%)
EPI475919	A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA)	3657.5	0.000000e+00	2097/2154 (97%)
EPI387543	A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA)	3657.5	0.000000e+00	2077/2125 (97%)
EPI1014810	A/mallard duck/Netherlands/20/2012 (A/H1N1) segment 3 (PA)	3651.9	0.000000e+00	2095/2153 (97%)
EPI1006618	A/Anseriformes/Anhui/S107/2014 (A/H1N1) segment 3 (PA)	3651.9	0.000000e+00	2095/2153 (97%)
EPI890476	A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA)	3651.9	0.000000e+00	2095/2153 (97%)
EPI890244	A/mallard duck/Netherlands/37/2011 (A/H1N1) segment 3 (PA)	3651.9	0.000000e+00	2095/2153 (97%)
EPI889662	A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA)	3651.9	0.000000e+00	2095/2153 (97%)
EPI1006654	A/Anseriformes/Anhui/L167/2014 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI895289	A/Anser fabalis/China/Anhui/S148/2014 (A/H6N2) segment 3 (PA)	3646.4	0.000000e+00	2095/2154 (97%)
EPI890932	A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI598436	A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598434	A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598433	A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598431	A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598430	A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598428	A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598425	A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598424	A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598423	A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598364	A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598362	A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598361	A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI598358	A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA)	3646.4	0.000000e+00	2092/2151 (97%)
EPI1014040	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 3 (PA)	3640.9	0.000000e+00	2093/2153 (97%)
EPI884260	A/mallard/Chany/126K/2014 (A/H5N3) segment 3 (PA)	3640.9	0.000000e+00	2092/2152 (97%)
EPI704519	A/duck/Mongolia/518/2015 (A/H10N3) segment 3 (PA)	3640.9	0.000000e+00	2093/2153 (97%)
EPI598432	A/duck/Jiangxi/6634/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144351	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI1144343	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1144335	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1131097	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1123238	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1123254	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI1123230	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI1119871	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI1119863	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 5 (NP)	2754.5	0.000000e+00	1495/1497 (99%)
EPI1131089	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 5 (NP)	2737.9	0.000000e+00	1492/1497 (99%)
EPI961450	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI909453	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1117254	A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1044548	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019791	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019783	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019775	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019767	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019759	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019751	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019743	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019695	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019687	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019679	A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019663	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019655	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019647	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019479	A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019407	A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019383	A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019367	A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909461	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019839	A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019831	A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019799	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019735	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019719	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019703	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019623	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019615	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019607	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019599	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019559	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019543	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019527	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019511	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019503	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019487	A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019471	A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019375	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954870	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954854	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954776	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI942936	A/turkey/England/003778/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909421	A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909413	A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909405	A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909397	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909389	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909381	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI906264	A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI868849	A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI860394	A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI861394	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP)	2706.5	0.000000e+00	1486/1497 (99%)
EPI1040234	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019863	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1487/1498 (99%)
EPI1019855	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1487/1498 (99%)
EPI1019847	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019727	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019711	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019671	A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019639	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019631	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019575	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019567	A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019463	A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019455	A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019447	A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019439	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019431	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019423	A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019399	A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019391	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1019359	A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI990779	A/mute swan/Germany-NI/AR1529-L02145/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI990763	A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI988592	A/turkey/Germany-NI/R9807/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI959332	A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI954752	A/Peregrine_falcon/Hungary/4882/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI954600	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI954576	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI954568	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI942944	A/chicken/Wales/000023/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI909437	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI909365	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI906263	A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI888670	A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI860402	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI859656	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP)	2704.6	0.000000e+00	1486/1497 (99%)
EPI1127539	A/mute swan/Shimane/3211A001/2017 (A/H5N6) segment 5 (NP)	2699.1	0.000000e+00	1485/1497 (99%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144354	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 8 (NS)	1496.9	0.000000e+00	812/812 (100%)
EPI1144346	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 8 (NS)	1491.4	0.000000e+00	810/812 (99%)
EPI1131100	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 8 (NS)	1491.4	0.000000e+00	810/812 (99%)
EPI1123231	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 8 (NS)	1491.4	0.000000e+00	810/812 (99%)
EPI1119874	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 8 (NS)	1491.4	0.000000e+00	810/812 (99%)
EPI1119866	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 8 (NS)	1491.4	0.000000e+00	810/812 (99%)
EPI1144338	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 8 (NS)	1485.8	0.000000e+00	809/812 (99%)
EPI1123255	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 8 (NS)	1485.8	0.000000e+00	809/812 (99%)
EPI1123239	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 8 (NS)	1485.8	0.000000e+00	809/812 (99%)
EPI1131092	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 8 (NS)	1469.2	0.000000e+00	806/812 (99%)
EPI866979	A/duck/Hungary/60441/2016 (A/H5N8) segment 8 (NS)	1402.7	0.000000e+00	794/812 (97%)
EPI1081973	A/goose/Italy/17VIR6358-3/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1081921	A/swan/Italy/17VIR7064-1/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032556	A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032542	A/Goose/Hungary/64909/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032534	A/Goose/Hungary/63743/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032526	A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032518	A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032510	A/Goose/Hungary/59763/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032502	A/Goose/Hungary/17985/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032494	A/Goose/Hungary/17580/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032486	A/Goose/Hungary/17051/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1032470	A/Goose/Hungary/17261/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI962038	A/Duck/Hungary/54738/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI961494	A/shelduck/Italy/17VIR1572-24/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI959557	A/Rook/Hungary/4975/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI959533	A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI956131	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954863	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954831	A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954815	A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954729	A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954721	A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954673	A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954633	A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954601	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI954577	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI909464	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI909456	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI888092	A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI866975	A/chicken/Hungary/59048/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI860533	A/duck/Hungary/55191/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI860520	A/goose/Hungary/55128/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI860517	A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 8 (NS)	1397.2	0.000000e+00	793/812 (97%)
EPI1126358	A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1119075	A/spoonbill/Taiwan/DB645/2017 (A/H5N6) segment 8 (NS)	1391.6	0.000000e+00	793/813 (97%)
EPI1093385	A/mute swan/Czech Republic/1058-17/2017 (H5N8) (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1085346	A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1081898	A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1081886	A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1045979	A/unknown/Tatarstan/94/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1045621	A/chicken/Tatarstan/88/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1045599	A/chicken/Shchyolkovo/47/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1040235	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1040230	A/turkey/Italy/17VIR5878-3/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1032478	A/Goose/Hungary/15729/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019848	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019824	A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019816	A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019808	A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019760	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019720	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019712	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019704	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019696	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019632	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019624	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019616	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019600	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019576	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019544	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019528	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019512	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019504	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019440	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019432	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1019376	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI1007679	A/peacock/Belgium/1017/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI969258	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI962059	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI962048	A/Duck/Hungary/55764/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI961471	A/chicken/Sergiyev Posad/39/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI961463	A/chicken/Sergiyev Posad/38/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI961453	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI956122	A/Goose/Hungary/59712/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954839	A/Mallard/Hungary/5821/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954823	A/Chicken/Hungary/1751/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954745	A/Chicken/Hungary/2496/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954713	A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954705	A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954649	A/Duck/Hungary/984/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954585	A/turkey/Italy/17VIR973-2/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI954569	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI953757	A/mallard/Hungary/57857/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI942947	A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI916717	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI909470	A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI909448	A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI909440	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)
EPI909424	A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS)	1391.6	0.000000e+00	792/812 (97%)

niman · January 25, 2018

Isolate detail

Isolate name:

A/pochard_duck/England/AVP_18_003254/2018

Isolate ID:

EPI_ISL_292224

Passage details/history:

Egg Passage 1

Type:

A / H5N6

Lineage:

Sample information

Collection date:

2018-01-10

Host	Aythya ferina

Additional host information:

Domestic status:

Wild

Is vaccinated:

N

Location:

United Kingdom / Dorset

Additional location information:

Abbotsbury

Health status:

Dead

Specimen source:

Cloacal swab

Strain or commercial product name used for vaccination:

Institute information

Originating lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the sample provider:

AVP-18-003254

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Submitting lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the submitting laboratory:

AVP-18-003254

Authors:

Seekings, James;
Ellis, Richard;
Brookes, Sharon M;
Reid, Scott;
Essen, Stephen;
Lewis, Nicola;
Brown, Ian H

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Publication

In vivo antiviral resistance

Antiviral resistance tested by experimental procedures

Adamantanes:

Unknown

Oseltamivir:

Unknown

Zanamivir:

Unknown

Peramivir:

Unknown

Other:

Unknown

Additional information

Antigenic characterization:

Note:

Sequence

segment	identifier	length	accession #
PB2	A/pochard_duck/England/AVP_18_003254/2018	2341	EPI1144339
PB1	A/pochard_duck/England/AVP_18_003254/2018	2341	EPI1144340
PA	A/pochard_duck/England/AVP_18_003254/2018	2233	EPI1144341
HA	A/pochard_duck/England/AVP_18_003254/2018	1776	EPI1144342
NP	A/pochard_duck/England/AVP_18_003254/2018	1565	EPI1144343
NA	A/pochard_duck/England/AVP_18_003254/2018	1465	EPI1144344
MP	A/pochard_duck/England/AVP_18_003254/2018	1027	EPI1144345
NS	A/pochard_duck/England/AVP_18_003254/2018	890	EPI1144346

Submitter information

Submitter:

Seekings, James

Submission Date:

2018-01-19

Last modifier:

Seekings, James

Last modified:

2018-01-19

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144342	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 4 (HA)	3147.8	0.000000e+00	1704/1704 (100%)
EPI1144350	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1144334	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 4 (HA)	3125.7	0.000000e+00	1700/1704 (99%)
EPI1123261	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 4 (HA)	3120.1	0.000000e+00	1699/1704 (99%)
EPI1119870	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 4 (HA)	3114.6	0.000000e+00	1698/1704 (99%)
EPI1119862	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 4 (HA)	3114.6	0.000000e+00	1698/1704 (99%)
EPI1131096	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 4 (HA)	3109.0	0.000000e+00	1697/1704 (99%)
EPI1123245	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 4 (HA)	3109.0	0.000000e+00	1697/1704 (99%)
EPI1123237	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 4 (HA)	3109.0	0.000000e+00	1697/1704 (99%)
EPI1131088	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019638	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019590	A/Eur_Wig/NL-Reeuwijk/16015903-003/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019582	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019550	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019518	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019510	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI943320	A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019734	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019678	A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019646	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019622	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019606	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019430	A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019406	A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI959413	A/Eurasian Wigeon/Netherlands/4/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI942943	A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019478	A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019438	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI954583	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI868848	A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019630	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019614	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1007675	A/peacock/Belgium/1017/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI990770	A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954877	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954861	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954607	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954575	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954559	A/swan/Italy/17VIR537-2/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI869687	A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA)	3033.3	0.000000e+00	1683/1704 (98%)
EPI1045611	A/chicken/Rostov/44/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019534	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI1019526	A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI990794	A/greylag goose/Germany-NI/AR1395-L02144/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI969347	A/turkey/Germany-BB/R377ff/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI961449	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI954813	A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI942935	A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI909452	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI909444	A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI869931	A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA)	3031.5	0.000000e+00	1683/1704 (98%)
EPI869930	A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA)	3027.8	0.000000e+00	1682/1704 (98%)
EPI1019718	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI1019558	A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI1019494	A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI1019398	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI1007667	A/chicken/Belgium/807/2017 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI990802	A/greylag goose/Germany-NI/AR703-L02138/2017 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI931145	A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI916604	A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI909436	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI859650	A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA)	3025.9	0.000000e+00	1682/1704 (98%)
EPI907346	A/domestic duck/Germany-BB/R681ff/2017 (A/H5N8) segment 4 (HA)	3022.2	0.000000e+00	1680/1702 (98%)
EPI1021106	A/mute swan/Czech Republic/1296-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI1019766	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI969254	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI931207	A/turkey/Germany-BB/R234ff/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI909428	A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI909404	A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI909396	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI909388	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI909380	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI888088	A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI869940	A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI869936	A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI861011	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI860401	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI859653	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI859212	A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA)	3020.4	0.000000e+00	1681/1704 (98%)
EPI1040223	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 4 (HA)	3016.7	0.000000e+00	1680/1704 (98%)
EPI909364	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA)	3016.7	0.000000e+00	1680/1704 (98%)
EPI1061371	A/chicken/Belgium/5990/2017 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019878	A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019870	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019862	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019790	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019782	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019774	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019758	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019750	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019726	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019710	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019702	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019670	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019542	A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019446	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI1019382	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI954783	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI954671	A/Duck/Hungary/1588/2017 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)
EPI922508	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 4 (HA)	3014.9	0.000000e+00	1680/1704 (98%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144344	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 6 (NA)	2603.0	0.000000e+00	1409/1409 (100%)
EPI1144352	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1123260	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1123244	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1123236	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1119872	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1119864	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1144336	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 6 (NA)	2580.9	0.000000e+00	1405/1409 (99%)
EPI1131098	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2560.6	0.000000e+00	1390/1392 (99%)
EPI1131090	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2551.3	0.000000e+00	1395/1402 (99%)
EPI1129918	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2462.7	0.000000e+00	1337/1339 (99%)
EPI1122895	A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 6 (NA)	2442.4	0.000000e+00	1380/1409 (97%)
EPI1122887	A/chicken/Greece/39_2017a/2017 (A/H5N6) segment 6 (NA)	2438.7	0.000000e+00	1379/1409 (97%)
EPI1122879	A/chicken/Greece/39_2017/2017 (A/H5N6) segment 6 (NA)	2438.7	0.000000e+00	1379/1409 (97%)
EPI1129917	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2403.6	0.000000e+00	1315/1322 (99%)
EPI1119073	A/spoonbill/Taiwan/DB645/2017 (A/H5N6) segment 6 (NA)	2398.1	0.000000e+00	1370/1406 (97%)
EPI1127540	A/mute swan/Shimane/3211A001/2017 (A/H5N6) segment 6 (NA)	2392.5	0.000000e+00	1371/1409 (97%)
EPI1011098	A/barnacle goose/Netherlands/2/2014 (A/H3N6) segment 6 (NA)	2381.5	0.000000e+00	1371/1411 (97%)
EPI1036189	A/duck/Moscow/4652/2011 (A/H4N6) segment 6 (NA)	2300.2	0.000000e+00	1356/1411 (96%)
EPI890326	A/mallard duck/Netherlands/19/2012 (A/H4N6) segment 6 (NA)	2281.7	0.000000e+00	1353/1411 (95%)
EPI1036196	A/duck/Moscow/4781/2012 (A/H4N6) segment 6 (NA)	2276.2	0.000000e+00	1352/1411 (95%)
EPI1145199	A/teal/Croatia/86-25/2012 (A/H4N6) segment 6 (NA)	2270.7	0.000000e+00	1351/1411 (95%)
EPI891032	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI1133993	A/duck/Mongolia/262/2011 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823917	A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823909	A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823901	A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823790	A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI470232	A/duck/Yunnan/87/2007 (A/H7N6) segment 6 (NA)	2215.3	0.000000e+00	1342/1412 (95%)
EPI692466	A/duck/Henan/S1091/2010 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI533781	A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI533775	A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI485322	A/eurasian wigeon/Mongolia/340V/2009 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI692506	A/duck/Hunan/S1012/2009 (A/H4N6) segment 6 (NA)	2198.6	0.000000e+00	1340/1413 (94%)
EPI1014700	A/mallard duck/Netherlands/7/2006 (A/H10N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI692346	A/chicken/Hunan/S1267/2010 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI692338	A/chicken/Hunan/S1248/2010 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI414148	A/duck/Jiangsu/4/2010 (A/H3N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI407862	A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 6 (NA)	2189.4	0.000000e+00	1337/1412 (94%)
EPI372354	A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 6 (NA)	2189.4	0.000000e+00	1338/1412 (94%)
EPI1013418	A/mallard duck/Netherlands/8/2006 (A/H10N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI395392	A/chicken/India/WB-NIV101006/2009 (A/H4N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI296530	A/mallard/Netherlands/4/2006 (A/H10N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI890683	A/mallard duck/Netherlands/6/2006 (A/H4N6) segment 6 (NA)	2182.0	0.000000e+00	1336/1412 (94%)
EPI243479	A/duck/Vietnam/OIE-2454/2009 (A/H4N6) segment 6 (NA)	2182.0	0.000000e+00	1337/1413 (94%)
EPI401303	A/duck/Korea/DY104/2007 (A/H4N6) segment 6 (NA)	2176.5	0.000000e+00	1335/1412 (94%)
EPI168523	A/common pochard/Aktau/1455/2006 (A/H4N6) segment 6 (NA)	2170.9	0.000000e+00	1335/1413 (94%)
EPI168522	A/coot/Aktau/1454/2006 (A/H4N6) segment 6 (NA)	2165.4	0.000000e+00	1335/1414 (94%)
EPI513237	A/mallard/Sweden/104925/2009 (A/H4N6) segment 6 (NA)	2159.9	0.000000e+00	1333/1413 (94%)
EPI704432	A/duck/Mongolia/769/2015 (A/H4N6) segment 6 (NA)	2154.3	0.000000e+00	1334/1415 (94%)
EPI540366	A/duck/Bangladesh/1521/2009 (A/H4N6) segment 6 (NA)	2154.3	0.000000e+00	1332/1413 (94%)
EPI513749	A/mallard/Sweden/79978/2008 (A/H4N6) segment 6 (NA)	2148.8	0.000000e+00	1330/1412 (94%)
EPI395393	A/chicken/India/WB-NIV101018/2009 (A/H4N6) segment 6 (NA)	2143.2	0.000000e+00	1330/1413 (94%)
EPI513568	A/mallard/Sweden/80348/2008 (A/H0) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI485357	A/ruddy shelduck/Mongolia/592/2010 (A/H8N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI284397	A/mallard/Czech Republic/12652/2007 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1326/1409 (94%)
EPI1013677	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI704293	A/duck/Mongolia/127/2015 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1330/1415 (93%)
EPI704269	A/duck/Mongolia/101/2015 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1330/1415 (93%)
EPI540374	A/duck/Bangladesh/1283/2008 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1329/1414 (93%)
EPI1011235	A/mallard duck/Netherlands/22/2011 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI889824	A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI540358	A/duck/Bangladesh/1766/2010 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1326/1412 (93%)
EPI513170	A/mallard/Sweden/105012/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI965451	A/duck/Bangladesh/26974/2015 (A/H3N6) segment 6 (NA)	2121.1	0.000000e+00	1329/1416 (93%)
EPI618783	A/mallard/Sweden/93475/2009 (A/H10N6) segment 6 (NA)	2121.1	0.000000e+00	1327/1414 (93%)
EPI513546	A/mallard/Sweden/101010/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513461	A/mallard/Sweden/101632/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513454	A/mallard/Sweden/101603/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513433	A/mallard/Sweden/101564/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513431	A/mallard/Sweden/101785/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513415	A/mallard/Sweden/101733/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513408	A/mallard/Sweden/101663/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513394	A/mallard/Sweden/101654/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513358	A/mallard/Sweden/101831/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513341	A/mallard/Sweden/104681/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513230	A/mallard/Sweden/104839/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI513163	A/mallard/Sweden/105011/2009 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI470233	A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 6 (NA)	2121.1	0.000000e+00	1325/1412 (93%)
EPI461617	A/duck/Hunan/S11893/2012 (A/H4N6) segment 6 (NA)	2121.1	0.000000e+00	1326/1413 (93%)
EPI965498	A/duck/Bangladesh/26920/2015 (A/H3N6) segment 6 (NA)	2115.5	0.000000e+00	1328/1416 (93%)
EPI965369	A/duck/Bangladesh/26948/2015 (A/H3N6) segment 6 (NA)	2115.5	0.000000e+00	1328/1416 (93%)
EPI965295	A/duck/Bangladesh/26918/2015 (A/H3N6) segment 6 (NA)	2115.5	0.000000e+00	1328/1416 (93%)
EPI692554	A/duck/Jiangxi/S2443/2012 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI540382	A/duck/Bangladesh/1784/2010 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1324/1412 (93%)
EPI540350	A/duck/Bangladesh/1783/2010 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1324/1412 (93%)
EPI514901	A/mallard/Sweden/105093/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513514	A/mallard/Sweden/101524/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1326/1414 (93%)
EPI513507	A/mallard/Sweden/101504/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513493	A/mallard/Sweden/101329/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513475	A/mallard/Sweden/101642/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513468	A/mallard/Sweden/101640/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1326/1414 (93%)
EPI513424	A/mallard/Sweden/101782/2009 (A/H0) segment 6 (NA)	2115.5	0.000000e+00	1326/1414 (93%)
EPI513386	A/mallard/Sweden/102029/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513379	A/mallard/Sweden/102024/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513334	A/mallard/Sweden/102157/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513327	A/mallard/Sweden/102124/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1326/1414 (93%)
EPI513320	A/mallard/Sweden/102114/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513306	A/mallard/Sweden/102045/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)
EPI513244	A/mallard/Sweden/104931/2009 (A/H4N6) segment 6 (NA)	2115.5	0.000000e+00	1325/1413 (93%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144353	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1144345	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1144337	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1139717	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1123256	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1123240	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1123232	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1119865	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 7 (MP)	1794.2	0.000000e+00	971/971 (100%)
EPI1119873	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 7 (MP)	1788.7	0.000000e+00	970/971 (99%)
EPI1131091	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 7 (MP)	1777.6	0.000000e+00	968/971 (99%)
EPI1131099	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 7 (MP)	1740.7	0.000000e+00	946/948 (99%)
EPI1085345	A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032553	A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032527	A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032519	A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032511	A/Goose/Hungary/59763/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032503	A/Goose/Hungary/17985/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032495	A/Goose/Hungary/17580/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032487	A/Goose/Hungary/17051/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1032479	A/Goose/Hungary/15729/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI975869	A/tawny owl/Germany-SN/R1186/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI969267	A/chicken/Czech Republic/2644-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI962050	A/Duck/Hungary/55764/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI962039	A/Duck/Hungary/54738/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI961503	A/turkey/Italy/17VIR1574-1/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI959534	A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI959427	A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI956123	A/Goose/Hungary/59712/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954832	A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954730	A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954722	A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954714	A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954682	A/Mute swan/Hungary/1955/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954650	A/Duck/Hungary/984/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954634	A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI954594	A/turkey/Italy/17VIR1338-3/2017 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI953518	A/mallard/Hungary/57857/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI931199	A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI931112	A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI930844	A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI930839	A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI866980	A/duck/Hungary/60441/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI860521	A/goose/Hungary/55128/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI860516	A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI859202	A/mute_swan/Hungary/51049/2016 (A/H5N8) segment 7 (MP)	1738.8	0.000000e+00	962/972 (98%)
EPI1126346	A/mallard/Czech Republic/136-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1735.1	0.000000e+00	961/972 (98%)
EPI1116593	A/mute swan/Czech Republic/54-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1735.1	0.000000e+00	961/972 (98%)
EPI1087641	A/chicken/Czech Republic/988-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1735.1	0.000000e+00	961/972 (98%)
EPI1127018	A/mallard/Czech Republic/1226-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126383	A/mallard/Czech Republic/1219-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126370	A/mute swan/Czech Republic/987-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126361	A/mute swan/Czech Republic/1156-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126360	A/mute swan/Czech Republic/1155-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126357	A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126351	A/mute swan/Czech Republic/967-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1126349	A/mute swan/Czech Republic/572-17_3/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1117249	A/mute swan/Czech Republic/964-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1081897	A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1032471	A/Goose/Hungary/17261/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI1002886	A/black swan/Germany-BW/R1364/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI987885	A/chicken/Republic of Macedonia/AR1167-L02131/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI975870	A/white stork/Germany-TH/R1149/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI972359	A/turkey/Germany-BB/R377ff/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI969264	A/chicken/Czech Republic/2643-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI969261	A/mute swan/Czech Republic/1813-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI962060	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961996	A/turkey/Germany-BB/R234ff/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961530	A/goose/Czech Republic/821-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961520	A/chicken/Italy/17VIR1751-3/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961512	A/chicken/Italy/17VIR1684-2/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961487	A/mute swan/Czech Republic/581-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI961481	A/mute swan/Czech Republic/499-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI959558	A/Rook/Hungary/4975/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI959526	A/Mute swan/Hungary/6092/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI959518	A/Cormorant/Hungary/6102/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI959421	A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954864	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954840	A/Mallard/Hungary/5821/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954824	A/Chicken/Hungary/1751/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954746	A/Chicken/Hungary/2496/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954738	A/Mute swan/Hungary/3542/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954706	A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954698	A/Mute swan/Hungary/2193/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954658	A/Goose/Hungary/1030/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954626	A/Mute swan/Hungary/119/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954586	A/turkey/Italy/17VIR973-2/2017 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI954534	A/Goose/Hungary/65817/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI931196	A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI930842	A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI919638	A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI917482	A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI916524	A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI916387	A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI869812	A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI861570	A/mute swan/Croatia/70/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI859210	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 7 (MP)	1733.3	0.000000e+00	961/972 (98%)
EPI888279	A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP)	1731.4	0.000000e+00	960/972 (98%)
EPI1126347	A/goose/Czech Republic/197-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1727.7	0.000000e+00	960/972 (98%)
EPI1032543	A/Goose/Hungary/64909/2016 (A/H5N8) segment 7 (MP)	1727.7	0.000000e+00	960/972 (98%)
EPI1032535	A/Goose/Hungary/63743/2016 (A/H5N8) segment 7 (MP)	1727.7	0.000000e+00	960/972 (98%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144339	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 1 (PB2)	4211.5	0.000000e+00	2280/2280 (100%)
EPI1123242	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 1 (PB2)	4194.9	0.000000e+00	2277/2280 (99%)
EPI1119867	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 1 (PB2)	4194.9	0.000000e+00	2277/2280 (99%)
EPI1119859	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 1 (PB2)	4194.9	0.000000e+00	2277/2280 (99%)
EPI1144347	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1144331	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI1139711	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI1131093	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI1123258	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI1123234	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI889820	A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 1 (PB2)	3917.9	0.000000e+00	2227/2280 (97%)
EPI889410	A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 1 (PB2)	3917.9	0.000000e+00	2227/2280 (97%)
EPI889594	A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 1 (PB2)	3906.8	0.000000e+00	2225/2280 (97%)
EPI890266	A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 1 (PB2)	3895.7	0.000000e+00	2223/2280 (97%)
EPI1010712	A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 1 (PB2)	3884.6	0.000000e+00	2221/2280 (97%)
EPI1014087	A/mallard duck/Georgia/11/2011 (A/H1N1) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI1013538	A/mallard duck/Netherlands/18/2012 (A/H4N2) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI1011210	A/mallard duck/Netherlands/16/2012 (A/H3N2) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI618045	A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI889776	A/mallard duck/Netherlands/32/2011 (A/H5N2) segment 1 (PB2)	3868.0	0.000000e+00	2219/2281 (97%)
EPI677988	A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 1 (PB2)	3862.5	0.000000e+00	2217/2280 (97%)
EPI560338	A/Italy/3/2013 (A/H7N7) segment 1 (PB2)	3862.5	0.000000e+00	2217/2280 (97%)
EPI678028	A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI678004	A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI677996	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI678076	A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678060	A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678052	A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678036	A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI341793	A/mallard/France/090360/2009 (A/H9N2) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678012	A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 1 (PB2)	3855.1	0.000000e+00	2215/2280 (97%)
EPI678068	A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 1 (PB2)	3853.2	0.000000e+00	2215/2280 (97%)
EPI891105	A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI816828	A/turkey/Poland/14/2013 (A/H9N2) segment 1 (PB2)	3851.4	0.000000e+00	2216/2281 (97%)
EPI678084	A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678044	A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678020	A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678092	A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 1 (PB2)	3849.5	0.000000e+00	2214/2280 (97%)
EPI1013811	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 1 (PB2)	3845.8	0.000000e+00	2215/2281 (97%)
EPI773762	A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 1 (PB2)	3840.3	0.000000e+00	2213/2280 (97%)
EPI617974	A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 1 (PB2)	3834.8	0.000000e+00	2213/2281 (97%)
EPI774511	A/chicken/Netherlands/15007212/15 (A/H10N7) segment 1 (PB2)	3823.7	0.000000e+00	2210/2280 (96%)
EPI718523	A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 1 (PB2)	3818.1	0.000000e+00	2209/2280 (96%)
EPI617882	A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 1 (PB2)	3818.1	0.000000e+00	2209/2280 (96%)
EPI1036183	A/duck/Moscow/4652/2011 (A/H4N6) segment 1 (PB2)	3814.5	0.000000e+00	2208/2280 (96%)
EPI890191	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 1 (PB2)	3812.6	0.000000e+00	2208/2280 (96%)
EPI816836	A/turkey/Poland/08/2014 (A/H9N2) segment 1 (PB2)	3812.6	0.000000e+00	2208/2280 (96%)
EPI816844	A/turkey/Poland/09/2014 (A/H9N2) segment 1 (PB2)	3808.9	0.000000e+00	2207/2280 (96%)
EPI687184	A/chicken/Scotland/532/2016 (A/H5N1) segment 1 (PB2)	3807.1	0.000000e+00	2200/2270 (96%)
EPI1133958	A/duck/Mongolia/27/2011 (A/H3N8) segment 1 (PB2)	3790.4	0.000000e+00	2204/2280 (96%)
EPI890883	A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 1 (PB2)	3779.4	0.000000e+00	2202/2280 (96%)
EPI839725	A/chicken/France/150169a/2015 (A/H5N1) segment 1 (PB2)	3773.8	0.000000e+00	2202/2281 (96%)
EPI1014358	A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 1 (PB2)	3762.7	0.000000e+00	2199/2280 (96%)
EPI174657	A/duck/Hunan/689/2006 (A/H5N1) segment 1 (PB2)	3757.2	0.000000e+00	2198/2280 (96%)
EPI221999	A/environment/Hunan/1-8/2007 (A/H5N1) segment 1 (PB2)	3751.7	0.000000e+00	2197/2280 (96%)
EPI174670	A/chicken/Hunan/3157/2006 (A/H5N1) segment 1 (PB2)	3746.1	0.000000e+00	2197/2281 (96%)
EPI174669	A/chicken/Hubei/3002/2007 (A/H5N1) segment 1 (PB2)	3740.6	0.000000e+00	2195/2280 (96%)
EPI174668	A/duck/Hubei/2911/2007 (A/H5N1) segment 1 (PB2)	3740.6	0.000000e+00	2195/2280 (96%)
EPI174667	A/chicken/Hubei/2856/2007 (A/H5N1) segment 1 (PB2)	3740.6	0.000000e+00	2195/2280 (96%)
EPI174665	A/duck/Hunan/1964/2007 (A/H5N1) segment 1 (PB2)	3740.6	0.000000e+00	2195/2280 (96%)
EPI222147	A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 1 (PB2)	3735.0	0.000000e+00	2194/2280 (96%)
EPI484292	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3731.4	0.000000e+00	2149/2214 (97%)
EPI823778	A/environment/Kamchatka/24/2016 (A/H13N8) segment 1 (PB2)	3729.5	0.000000e+00	2193/2280 (96%)
EPI823762	A/environment/Kamchatka/23/2016 (A/H13N8) segment 1 (PB2)	3725.8	0.000000e+00	2192/2280 (96%)
EPI262682	A/aquatic bird/Korea/w120/2006 (A/H5N2) segment 1 (PB2)	3724.0	0.000000e+00	2193/2281 (96%)
EPI262680	A/aquatic bird/Korea/w113/2006 (A/H5N2) segment 1 (PB2)	3724.0	0.000000e+00	2193/2281 (96%)
EPI173585	A/swine/Korea/C12/2008 (A/H5N2) segment 1 (PB2)	3724.0	0.000000e+00	2193/2281 (96%)
EPI1013684	A/mallard duck/Netherlands/40/2011 (A/H7N1) segment 1 (PB2)	3718.4	0.000000e+00	2192/2281 (96%)
EPI1013496	A/mallard duck/Netherlands/48/2011 (A/H7N1) segment 1 (PB2)	3718.4	0.000000e+00	2192/2281 (96%)
EPI889596	A/mallard duck/Netherlands/8/2012 (A/H1N1) segment 1 (PB2)	3718.4	0.000000e+00	2191/2280 (96%)
EPI839733	A/duck/France/150233/2015 (A/H5N2) segment 1 (PB2)	3718.4	0.000000e+00	2191/2280 (96%)
EPI809271	A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 1 (PB2)	3718.4	0.000000e+00	2193/2282 (96%)
EPI262683	A/aquatic bird/Korea/w121/2006 (A/H5N2) segment 1 (PB2)	3718.4	0.000000e+00	2192/2281 (96%)
EPI1011215	A/mallard duck/Netherlands/45/2011 (A/H8N1) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI890747	A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI889269	A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI889248	A/mallard duck/Netherlands/43/2011 (A/H7N1) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI839741	A/duck/France/150236/2015 (A/H5N9) segment 1 (PB2)	3712.9	0.000000e+00	2190/2280 (96%)
EPI262681	A/aquatic bird/Korea/w114/2006 (A/H5N2) segment 1 (PB2)	3712.9	0.000000e+00	2192/2282 (96%)
EPI174662	A/duck/Henan/1652/2006 (A/H5N1) segment 1 (PB2)	3707.3	0.000000e+00	2189/2280 (96%)
EPI174660	A/duck/Henan/1647/2006 (A/H5N1) segment 1 (PB2)	3707.3	0.000000e+00	2190/2281 (96%)
EPI961485	A/environment/Kamchatka/117/2016 (A/H13N8) segment 1 (PB2)	3701.8	0.000000e+00	2188/2280 (95%)
EPI940605	A/guinea fowl/France/150207n/2015 (A/H5N9) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI167950	A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 1 (PB2)	3698.1	0.000000e+00	2173/2258 (96%)
EPI222581	A/scaly-breasted munia/Hong Kong/45/2007 (A/H5N1) segment 1 (PB2)	3696.3	0.000000e+00	2178/2266 (96%)
EPI220527	A/environment/Hunan/6-69/2008 (A/H5N1) segment 1 (PB2)	3696.3	0.000000e+00	2187/2280 (95%)
EPI809383	A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 1 (PB2)	3679.6	0.000000e+00	2187/2283 (95%)
EPI1087898	A/ Quail /Egypt/1253V/2016 (A/H9N2) segment 1 (PB2)	3646.4	0.000000e+00	2179/2281 (95%)
EPI1086370	A/Chicken/Egypt/374V/2016 (A/H9N2) segment 1 (PB2)	3646.4	0.000000e+00	2181/2283 (95%)
EPI1006524	A/duck/Guangxi/015D2/2009 (A/H3N2) segment 1 (PB2)	3646.4	0.000000e+00	2178/2280 (95%)
EPI167855	A/crested goshawk/Hong Kong/458/2007 (A/H5N1) segment 1 (PB2)	3640.9	0.000000e+00	2141/2226 (96%)
EPI316548	A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 1 (PB2)	3591.0	0.000000e+00	2168/2280 (95%)
EPI401812	A/green-winged teal/Xianghai/430/2011 (A/H5N2) segment 1 (PB2)	3585.5	0.000000e+00	2167/2280 (95%)
EPI534805	A/duck/Zhejiang/D18/2013 (A/H3N3) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI534804	A/duck/Zhejiang/D17/2013 (A/H3N3) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI534803	A/duck/Zhejiang/D16/2013 (A/H3N3) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI534800	A/duck/Zhejiang/D13/2013 (A/H3N2) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI534799	A/duck/Zhejiang/D11/2013 (A/H3N2) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI469171	A/wild duck/Guangdong/520/2001 (A/H1N9) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI99874	A/duck/Denmark/65047/04 (A/H5N2) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144340	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 2 (PB1)	4193.0	0.000000e+00	2270/2270 (100%)
EPI1144332	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 2 (PB1)	4176.4	0.000000e+00	2267/2270 (99%)
EPI1123259	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 2 (PB1)	4176.4	0.000000e+00	2267/2270 (99%)
EPI1119860	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 2 (PB1)	4176.4	0.000000e+00	2267/2270 (99%)
EPI1123235	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 2 (PB1)	4170.9	0.000000e+00	2266/2270 (99%)
EPI1119868	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 2 (PB1)	4170.9	0.000000e+00	2266/2270 (99%)
EPI1144348	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 2 (PB1)	4167.2	0.000000e+00	2266/2271 (99%)
EPI1131094	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 2 (PB1)	4165.3	0.000000e+00	2265/2270 (99%)
EPI1123243	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 2 (PB1)	4165.3	0.000000e+00	2265/2270 (99%)
EPI1139712	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 2 (PB1)	4154.2	0.000000e+00	2263/2270 (99%)
EPI1131086	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 2 (PB1)	4115.5	0.000000e+00	2256/2270 (99%)
EPI909458	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 2 (PB1)	4060.1	0.000000e+00	2246/2270 (98%)
EPI909450	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 2 (PB1)	4060.1	0.000000e+00	2246/2270 (98%)
EPI1019772	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 2 (PB1)	4054.5	0.000000e+00	2245/2270 (98%)
EPI961447	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 2 (PB1)	4054.5	0.000000e+00	2245/2270 (98%)
EPI1117251	A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019844	A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019836	A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019788	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019780	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019724	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019716	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019708	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019692	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019684	A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019652	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019628	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019596	A/Eur_Wig/NL-Terschelling/16015692-010/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019532	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019460	A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019396	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019388	A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019380	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019372	A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI1019364	A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI956130	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI954581	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI922322	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI860495	A/tufted duck/Germany-SH/R8444/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI860390	A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI860234	A/wild duck/Poland/82A/2016 (A/H5N8) segment 2 (PB1)	4049.0	0.000000e+00	2244/2270 (98%)
EPI967462	A/domestic duck/Germany-MV/R9764/2016 (A/H5N8) segment 2 (PB1)	4045.3	0.000000e+00	2243/2270 (98%)
EPI1044546	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019876	A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019868	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019860	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019852	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019828	A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019820	A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019812	A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019804	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019796	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019756	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019668	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019660	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019612	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019572	A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019564	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019540	A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019500	A/Eur_Wig/NL-Akkrum/16015817-003/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019484	A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019468	A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019452	A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019420	A/Ch/NL-Hiaure/16016112-001-005/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019412	A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI969252	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI959329	A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI954781	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI909362	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI885204	A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI881281	A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI881276	A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI863863	A/Common Goldeneye/Sweden/SVA161117KU0322/SZ0002165/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI860398	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI859659	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 2 (PB1)	4043.4	0.000000e+00	2243/2270 (98%)
EPI1019764	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI1019748	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI1019700	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI1019556	A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI1019524	A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI962063	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI954811	A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI954661	A/Goose/Hungary/1030/2017 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI931205	A/chicken/Germany-MV/R10048/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI909426	A/turkey/Rostov/11/2017 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI859205	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 2 (PB1)	4037.9	0.000000e+00	2242/2270 (98%)
EPI869685	A/decoy_duck/France/161104e/2016 (A/H5N8) segment 2 (PB1)	4034.2	0.000000e+00	2241/2270 (98%)
EPI1122891	A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1122875	A/chicken/Greece/39_2017/2017 (A/H5N6) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1032482	A/Goose/Hungary/15729/2017 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019740	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019732	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019644	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019548	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019516	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1019444	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1007673	A/peacock/Belgium/1017/2017 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI1007665	A/chicken/Belgium/807/2017 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI954875	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)
EPI954867	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 2 (PB1)	4032.4	0.000000e+00	2241/2270 (98%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144341	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 3 (PA)	3973.3	0.000000e+00	2151/2151 (100%)
EPI1123257	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 3 (PA)	3962.2	0.000000e+00	2149/2151 (99%)
EPI1123241	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 3 (PA)	3962.2	0.000000e+00	2149/2151 (99%)
EPI1119869	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 3 (PA)	3962.2	0.000000e+00	2149/2151 (99%)
EPI1144349	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1123233	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1119861	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 3 (PA)	3956.6	0.000000e+00	2148/2151 (99%)
EPI1144333	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 3 (PA)	3951.1	0.000000e+00	2147/2151 (99%)
EPI1139713	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 3 (PA)	3951.1	0.000000e+00	2147/2151 (99%)
EPI1131095	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 3 (PA)	3951.1	0.000000e+00	2147/2151 (99%)
EPI1019770	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019722	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019706	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019650	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019562	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019442	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019378	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 3 (PA)	3901.2	0.000000e+00	2138/2151 (99%)
EPI1019746	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019690	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019666	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1019658	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 3 (PA)	3895.7	0.000000e+00	2137/2151 (99%)
EPI1044547	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 3 (PA)	3890.2	0.000000e+00	2136/2151 (99%)
EPI1019802	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 3 (PA)	3890.2	0.000000e+00	2136/2151 (99%)
EPI1019794	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 3 (PA)	3890.2	0.000000e+00	2136/2151 (99%)
EPI1019738	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 3 (PA)	3890.2	0.000000e+00	2136/2151 (99%)
EPI965226	A/black-tailed godwit/Bangladesh/24734/2015 (A/H7N5) segment 3 (PA)	3733.2	0.000000e+00	2108/2152 (97%)
EPI926008	A/domestic_duck/Siberia/49_feather/2016 (A/H6N8) segment 3 (PA)	3724.0	0.000000e+00	2107/2152 (97%)
EPI926000	A/mallard/Chany/355/2016 (A/H1N1) segment 3 (PA)	3718.4	0.000000e+00	2106/2152 (97%)
EPI925992	A/gadwall/Chany/315/2016 (A/H1N1) segment 3 (PA)	3718.4	0.000000e+00	2106/2152 (97%)
EPI925984	A/mallard/Chany/313/2016 (A/H1N1) segment 3 (PA)	3718.4	0.000000e+00	2106/2152 (97%)
EPI965379	A/duck/Bangladesh/24697/2015 (A/H15N9) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI965278	A/duck/Bangladesh/24704/2015 (A/H15N9) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI965237	A/duck/Bangladesh/25891/2015 (A/H4N6) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI963325	A/duck/Bangladesh/24035/2014 (A/H10N1) segment 3 (PA)	3707.3	0.000000e+00	2104/2152 (97%)
EPI614265	A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 3 (PA)	3707.3	0.000000e+00	2105/2153 (97%)
EPI965322	A/duck/Bangladesh/26918/2015 (A/H3N6) segment 3 (PA)	3701.8	0.000000e+00	2103/2152 (97%)
EPI446529	A/wild goose/Dongting/C1037/2011 (A/H12N8) segment 3 (PA)	3690.7	0.000000e+00	2100/2151 (97%)
EPI884265	A/mallard/Chany/126K-2/2014 (A/H8N4) segment 3 (PA)	3685.2	0.000000e+00	2100/2152 (97%)
EPI476088	A/pink-footed goose/Iceland/0987/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI476065	A/greylag goose/Iceland/0926/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI475923	A/greylag goose/Iceland/0921/2011 (A/H6N8) segment 3 (PA)	3674.1	0.000000e+00	2100/2154 (97%)
EPI538458	A/common teal/Mongolia/1920/2011 (A/H4N6) segment 3 (PA)	3672.3	0.000000e+00	2080/2126 (97%)
EPI1006647	A/Anseriformes/Anhui/L25/2014 (A/H1N1) segment 3 (PA)	3668.6	0.000000e+00	2098/2153 (97%)
EPI965541	A/duck/Bangladesh/27042/2015 (A/H7N9) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI965406	A/duck/Bangladesh/26980/2015 (A/H7N9) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI925976	A/pintail/Chany/198/2016 (A/H3N8) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI925960	A/teal/Chany/135/2016 (A/H3N8) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI704339	A/duck/Mongolia/179/2015 (A/H3N8) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI704322	A/duck/Mongolia/173/2015 (A/H3N8) segment 3 (PA)	3668.6	0.000000e+00	2097/2152 (97%)
EPI476086	A/greylag goose/Iceland/0976/2011 (A/H6N8) segment 3 (PA)	3668.6	0.000000e+00	2099/2154 (97%)
EPI476085	A/greylag goose/Iceland/0961/2011 (A/H6N8) segment 3 (PA)	3668.6	0.000000e+00	2099/2154 (97%)
EPI475922	A/greylag goose/Iceland/0911/2011 (A/H6N8) segment 3 (PA)	3668.6	0.000000e+00	2099/2154 (97%)
EPI969334	A/wild bird/Korea/SK14/2014 (A/H1N1) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI965516	A/duck/Bangladesh/26992/2015 (A/H7N9) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI942184	A/duck/Hubei/ZYSYG15/2015 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI942183	A/duck/Hubei/ZYSYG14/2015 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI942182	A/duck/Hubei/ZYSYG1/2015 (A/H6N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI925968	A/mallard/Chany/185/2016 (A/H3N8) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI692479	A/duck/Hubei/S2114/2012 (A/H4N8) segment 3 (PA)	3663.0	0.000000e+00	2095/2151 (97%)
EPI596393	A/muscovy duck/Vietnam/LBM201/2012 (A/H3N2) segment 3 (PA)	3663.0	0.000000e+00	2096/2152 (97%)
EPI476087	A/greylag goose/Iceland/0980/2011 (A/H6N8) segment 3 (PA)	3663.0	0.000000e+00	2098/2154 (97%)
EPI475921	A/greylag goose/Iceland/1482/2011 (A/H6N8) segment 3 (PA)	3663.0	0.000000e+00	2098/2154 (97%)
EPI336009	A/teal/Chany/444/2009 (A/H8N8) segment 3 (PA)	3663.0	0.000000e+00	2097/2153 (97%)
EPI1006604	A/Anseriformes/Anhui/S3/2014 (A/H1N1) segment 3 (PA)	3657.5	0.000000e+00	2096/2153 (97%)
EPI895321	A/Anser fabalis/China/Anhui/L144/2014 (A/H6N1) segment 3 (PA)	3657.5	0.000000e+00	2096/2153 (97%)
EPI895305	A/Anser fabalis/China/Anhui/L63/2014 (A/H6N2) segment 3 (PA)	3657.5	0.000000e+00	2096/2153 (97%)
EPI895297	A/Anser fabalis/China/Anhui/L9/2014 (A/H6N2) segment 3 (PA)	3657.5	0.000000e+00	2096/2153 (97%)
EPI895281	A/Anser fabalis/China/Anhui/S104/2014 (A/H6N2) segment 3 (PA)	3657.5	0.000000e+00	2097/2154 (97%)
EPI895265	A/Anser fabalis/China/Anhui/S45/2014 (A/H6N2) segment 3 (PA)	3657.5	0.000000e+00	2097/2154 (97%)
EPI441050	A/muscovy duck/Vietnam/LBM198/2012 (A/H6N2) segment 3 (PA)	3657.5	0.000000e+00	2095/2152 (97%)
EPI418270	A/muscovy duck/Vietnam/LBM189/2012 (A/H3N2) segment 3 (PA)	3657.5	0.000000e+00	2095/2152 (97%)
EPI387543	A/white-fronted goose/Mongolia/1-125/2008 (A/H3N8) segment 3 (PA)	3657.5	0.000000e+00	2077/2125 (97%)
EPI222086	A/garganey/Altai/1213/2007 (A/H5N2) segment 3 (PA)	3657.5	0.000000e+00	2095/2152 (97%)
EPI222046	A/gadwall/Altai/1202/2007 (A/H5N2) segment 3 (PA)	3657.5	0.000000e+00	2095/2152 (97%)
EPI1006661	A/Anseriformes/Anhui/L259/2014 (A/H1N1) segment 3 (PA)	3651.9	0.000000e+00	2096/2154 (97%)
EPI475919	A/greylag goose/Iceland/1474/2011 (A/H6N8) segment 3 (PA)	3651.9	0.000000e+00	2096/2154 (97%)
EPI1014810	A/mallard duck/Netherlands/20/2012 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI1006618	A/Anseriformes/Anhui/S107/2014 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI890476	A/mallard duck/Netherlands/10/2012 (A/H6N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI890244	A/mallard duck/Netherlands/37/2011 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI889662	A/mallard duck/Netherlands/7/2012 (A/H1N1) segment 3 (PA)	3646.4	0.000000e+00	2094/2153 (97%)
EPI1006654	A/Anseriformes/Anhui/L167/2014 (A/H1N1) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI895289	A/Anser fabalis/China/Anhui/S148/2014 (A/H6N2) segment 3 (PA)	3640.9	0.000000e+00	2094/2154 (97%)
EPI890932	A/mallard duck/Netherlands/5/2013 (A/H1N1) segment 3 (PA)	3640.9	0.000000e+00	2093/2153 (97%)
EPI598436	A/duck/Jiangxi/6535/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598434	A/duck/Jiangxi/6648/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598433	A/duck/Jiangxi/6645/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598431	A/duck/Jiangxi/6624/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598430	A/duck/Jiangxi/6602/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598428	A/duck/Jiangxi/6568/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598425	A/duck/Jiangxi/6544/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598424	A/duck/Jiangxi/6526/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598423	A/duck/Jiangxi/6515/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598364	A/duck/Jiangxi/6496/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598362	A/duck/Jiangxi/6474/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598361	A/duck/Jiangxi/6460/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI598358	A/duck/Jiangxi/6450/2013 (A/H10N8) segment 3 (PA)	3640.9	0.000000e+00	2091/2151 (97%)
EPI538449	A/ruddy shelduck/Mongolia/686C2/2008 (A/H2N3) segment 3 (PA)	3639.0	0.000000e+00	2075/2127 (97%)
EPI1014040	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 3 (PA)	3635.3	0.000000e+00	2092/2153 (97%)
EPI884260	A/mallard/Chany/126K/2014 (A/H5N3) segment 3 (PA)	3635.3	0.000000e+00	2091/2152 (97%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144343	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI1144335	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI1131097	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI1123238	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 5 (NP)	2765.6	0.000000e+00	1497/1497 (100%)
EPI1144351	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1139715	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1123254	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1123230	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1119871	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1119863	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 5 (NP)	2760.0	0.000000e+00	1496/1497 (99%)
EPI1131089	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 5 (NP)	2743.4	0.000000e+00	1493/1497 (99%)
EPI961450	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 5 (NP)	2726.8	0.000000e+00	1490/1497 (99%)
EPI909453	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 5 (NP)	2726.8	0.000000e+00	1490/1497 (99%)
EPI1117254	A/T_Dk/NL-Werkendam/16014159-001/2016 (A/H5N5) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1044548	A/mute swan/Kaliningrad/132/2017 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019791	A/T_Dk/NL-Werkendam/16014159-002/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019783	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019775	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019767	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019759	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019751	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019743	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019695	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019687	A/Gull1/NL-Marker Wadden/16014466-011/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019679	A/Gull/NL-Marker Wadden/16014466-020/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019663	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019655	A/Go/NL-Roggebotsluis/16014462-010/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019647	A/G_c_grebe/NL-Monnickendam/16013865-009-010/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019479	A/Dk/NL-Rotterdam/16014008-001-005/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019407	A/Ch/NL-Den Oever/16014231-001/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019383	A/C_Gull/NL-Slootdorp/16014102-003/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019367	A/Bl_H_gull/NL-Slootdorp/16014102-002/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI909461	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 5 (NP)	2721.2	0.000000e+00	1489/1497 (99%)
EPI1019839	A/T_Dk/NL-Zeewolde/16013976-005/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019831	A/T_Dk/NL-Zeewolde/16013976-004-006/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019799	A/T_Dk/NL-Werkendam/16014159-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019735	A/Mal/NL-Mastenbroek/16015378-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019719	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019703	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019623	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019615	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019607	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019599	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019559	A/Eur_Wig/NL-Groningen/16015376-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019543	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019527	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019511	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019503	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019487	A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019471	A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI1019375	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI954870	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI954854	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI954776	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI942936	A/turkey/England/003778/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909421	A/chicken/Voronezh/20/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909413	A/chicken/Voronezh/19/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909405	A/chicken/Voronezh/18/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909397	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909389	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI909381	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI906264	A/chicken/Germany-MV/R8790/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI868849	A/turkey/England/052131/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI860394	A/tufted_duck/Germany/AR8444-L01987/2016 (A/H5N8) segment 5 (NP)	2715.7	0.000000e+00	1488/1497 (99%)
EPI861394	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 5 (NP)	2712.0	0.000000e+00	1487/1497 (99%)
EPI1040234	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019863	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1488/1498 (99%)
EPI1019855	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1488/1498 (99%)
EPI1019847	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019727	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019711	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019671	A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019639	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019631	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019575	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019567	A/Eur_Wig/NL-Leeuwarden/16015699-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019463	A/Dk/NL-Biddinghuizen/16015145-021-025/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019455	A/Dk/NL-Biddinghuizen/16015083-016-020/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019447	A/Dk/NL-Biddinghuizen/16014829-011-015/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019439	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019431	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019423	A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019399	A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019391	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI1019359	A/Bk_swan/NL-Den Oever/16013973-002/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI990779	A/mute swan/Germany-NI/AR1529-L02145/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI990763	A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI988592	A/turkey/Germany-NI/R9807/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI959332	A/Mew Gull/Netherlands/1/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954752	A/Peregrine_falcon/Hungary/4882/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954600	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954576	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI954568	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI942944	A/chicken/Wales/000023/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909437	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI909365	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI906263	A/chicken/Germany-SH/R8758/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI888670	A/domestic duck/Germany-MV/R9869/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI860402	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)
EPI859656	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 5 (NP)	2710.2	0.000000e+00	1487/1497 (99%)

niman · January 25, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144346	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 8 (NS)	1554.2	0.000000e+00	841/841 (100%)
EPI1131100	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 8 (NS)	1550.5	0.000000e+00	839/839 (100%)
EPI1123231	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 8 (NS)	1550.5	0.000000e+00	839/839 (100%)
EPI1119874	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 8 (NS)	1550.5	0.000000e+00	839/839 (100%)
EPI1119866	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 8 (NS)	1550.5	0.000000e+00	839/839 (100%)
EPI1144338	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 8 (NS)	1548.6	0.000000e+00	840/841 (99%)
EPI1144354	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 8 (NS)	1544.9	0.000000e+00	839/841 (99%)
EPI1123255	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 8 (NS)	1544.9	0.000000e+00	838/839 (99%)
EPI1123239	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 8 (NS)	1544.9	0.000000e+00	838/839 (99%)
EPI1139718	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 8 (NS)	1533.8	0.000000e+00	836/839 (99%)
EPI1131092	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 8 (NS)	1522.8	0.000000e+00	834/839 (99%)
EPI866979	A/duck/Hungary/60441/2016 (A/H5N8) segment 8 (NS)	1461.8	0.000000e+00	823/839 (98%)
EPI1081973	A/goose/Italy/17VIR6358-3/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1081921	A/swan/Italy/17VIR7064-1/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032556	A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032542	A/Goose/Hungary/64909/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032534	A/Goose/Hungary/63743/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032526	A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032518	A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032510	A/Goose/Hungary/59763/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032502	A/Goose/Hungary/17985/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032494	A/Goose/Hungary/17580/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032486	A/Goose/Hungary/17051/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1032470	A/Goose/Hungary/17261/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI962038	A/Duck/Hungary/54738/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI959557	A/Rook/Hungary/4975/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI959533	A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI956131	A/chicken/Germany-NI/R11406/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954863	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954831	A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954815	A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954729	A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954721	A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954673	A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI954633	A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI909464	A/chicken/Kalmykia/2643/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI909456	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI866975	A/chicken/Hungary/59048/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI860533	A/duck/Hungary/55191/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI860520	A/goose/Hungary/55128/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI860517	A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 8 (NS)	1456.3	0.000000e+00	822/839 (97%)
EPI1019848	A/T_Dk/NL-Zeewolde/16013976-006/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019824	A/T_Dk/NL-Zeewolde/16013976-004/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019816	A/T_Dk/NL-Zeewolde/16013976-001-003/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019808	A/T_Dk/NL-Zeewolde/16013976-001/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019760	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019720	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019712	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019704	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019696	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019624	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019528	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019440	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI1019376	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI969258	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	823/841 (97%)
EPI961494	A/shelduck/Italy/17VIR1572-24/2017 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	821/838 (97%)
EPI954601	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	821/838 (97%)
EPI954577	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	821/838 (97%)
EPI888092	A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 8 (NS)	1454.4	0.000000e+00	821/838 (97%)
EPI1126358	A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1093385	A/mute swan/Czech Republic/1058-17/2017 (H5N8) (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1085346	A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1081898	A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1081886	A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1045979	A/unknown/Tatarstan/94/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1045621	A/chicken/Tatarstan/88/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1045599	A/chicken/Shchyolkovo/47/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1032478	A/Goose/Hungary/15729/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019616	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019600	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019576	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019544	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019512	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019504	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1019432	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI1007679	A/peacock/Belgium/1017/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI962059	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI962048	A/Duck/Hungary/55764/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI961471	A/chicken/Sergiyev Posad/39/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI961463	A/chicken/Sergiyev Posad/38/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI961453	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI956122	A/Goose/Hungary/59712/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI954839	A/Mallard/Hungary/5821/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI954823	A/Chicken/Hungary/1751/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI954745	A/Chicken/Hungary/2496/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI954713	A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI954705	A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI953757	A/mallard/Hungary/57857/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI942947	A/chicken/Wales/000023/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909470	A/chicken/Astrakhan/3131/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909448	A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909440	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909424	A/chicken/Voronezh/20/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909416	A/chicken/Voronezh/19/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909408	A/chicken/Voronezh/18/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909400	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909392	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI909384	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI868852	A/turkey/England/052131/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)
EPI859211	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 8 (NS)	1450.7	0.000000e+00	821/839 (97%)

niman · January 25, 2018

Isolate detail

Isolate name:

A/mute_swan/England/AVP_18_001986/2017

Isolate ID:

EPI_ISL_292223

Passage details/history:

Egg Passage 1

Type:

A / H5N6

Lineage:

Sample information

Collection date:

2017-12-31

Host	Cygnus olor

Additional host information:

Domestic status:

Wild

Is vaccinated:

N

Location:

United Kingdom / Dorset

Additional location information:

Abbotsbury

Health status:

Dead

Specimen source:

Oro-pharyngeal swab

Strain or commercial product name used for vaccination:

Institute information

Originating lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the sample provider:

AVP-18-001986

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Submitting lab:

Animal and Plant Health Agency (APHA)

Sample ID given by the submitting laboratory:

AVP-18-001986

Authors:

Seekings, James;
Ellis, Richard;
Brookes, Sharon M;
Reid, Scott;
Essen, Stephen;
Lewis, Nicola;
Brown, Ian H

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

Publication

In vivo antiviral resistance

Antiviral resistance tested by experimental procedures

Adamantanes:

Unknown

Oseltamivir:

Unknown

Zanamivir:

Unknown

Peramivir:

Unknown

Other:

Unknown

Additional information

Antigenic characterization:

Note:

Sequence

segment	identifier	length	accession #
PB2	A/mute_swan/England/AVP_18_001986/2017	2341	EPI1144331
PB1	A/mute_swan/England/AVP_18_001986/2017	2341	EPI1144332
PA	A/mute_swan/England/AVP_18_001986/2017	2233	EPI1144333
HA	A/mute_swan/England/AVP_18_001986/2017	1776	EPI1144334
NP	A/mute_swan/England/AVP_18_001986/2017	1565	EPI1144335
NA	A/mute_swan/England/AVP_18_001986/2017	1465	EPI1144336
MP	A/mute_swan/England/AVP_18_001986/2017	1027	EPI1144337
NS	A/mute_swan/England/AVP_18_001986/2017	890	EPI1144338

Submitter information

Submitter:

Seekings, James

Submission Date:

2018-01-19

Last modifier:

Seekings, James

Last modified:

2018-01-23

Address:

Animal and Plant Health Agency (APHA) 
Virology Department
 Woodham Lane
New Haw, Addlestone, Surrey KT15 3NB
United Kingdom

niman · January 26, 2018

Segment-ID	Name	Score	E-Value	Identity
EPI1144334	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 4 (HA)	3147.8	0.000000e+00	1704/1704 (100%)
EPI1144350	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 4 (HA)	3142.3	0.000000e+00	1703/1704 (99%)
EPI1123261	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 4 (HA)	3142.3	0.000000e+00	1703/1704 (99%)
EPI1119870	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 4 (HA)	3136.7	0.000000e+00	1702/1704 (99%)
EPI1119862	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 4 (HA)	3136.7	0.000000e+00	1702/1704 (99%)
EPI1131096	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1123245	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1123237	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 4 (HA)	3131.2	0.000000e+00	1701/1704 (99%)
EPI1144342	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 4 (HA)	3125.7	0.000000e+00	1700/1704 (99%)
EPI1139714	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 4 (HA)	3120.1	0.000000e+00	1698/1704 (99%)
EPI1131088	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 4 (HA)	3092.4	0.000000e+00	1694/1704 (99%)
EPI1019638	A/Eur_Wig/NL-Zoeterwoude/16015702-010/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019590	A/Eur_Wig/NL-Reeuwijk/16015903-003/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019582	A/Eur_Wig/NL-Leidschendam/16015697-007/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019550	A/Eur_Wig/NL-Gouda/16015824-001/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019518	A/Eur_Wig/NL-De Waal (Texel)/16014891-004/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019510	A/Eur_Wig/NL-De Waal (Texel)/16014891-003/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI943320	A/pochard_duck/England/SA12_157809/2016 (A/H5N8) segment 4 (HA)	3075.8	0.000000e+00	1691/1704 (99%)
EPI1019734	A/Mal/NL-IJsselmuiden/16015448-002/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019678	A/Grey_Go/NL-Groot-Ammers/16015901-012/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019646	A/Eur_Wig/NL-Zwolle/16015820-002/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019622	A/Eur_Wig/NL-West Graftdijk/16015746-003/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019606	A/Eur_Wig/NL-Vianen/16015917-006/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019430	A/Ch/NL-Rhenen/16016141-006/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019406	A/Ch/NL-Boven Leeuwen/16016151-006-010/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI959413	A/Eurasian Wigeon/Netherlands/4/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI942943	A/chicken/Wales/000023/2016 (A/H5N8) segment 4 (HA)	3070.3	0.000000e+00	1690/1704 (99%)
EPI1019478	A/Dk/NL-Kamperveen/16016104-001-005/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019438	A/Ch/NL-Zoeterwoude/16016484-021-025/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI954583	A/chicken/Italy/17VIR653-12/2017 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI868848	A/turkey/England/052131/2016 (A/H5N8) segment 4 (HA)	3064.7	0.000000e+00	1689/1704 (99%)
EPI1019630	A/Eur_Wig/NL-Wormer/16016143-002/2016 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI1019614	A/Eur_Wig/NL-Walterswald/16015923-003/2016 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI1007675	A/peacock/Belgium/1017/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI990770	A/eurasian wigeon/Germany-NI/AR249-L02143/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954877	A/Mallard/Hungary/1574a/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954861	A/Mallard/Hungary/1574b/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954607	A/turkey/Italy/17VIR1452-22/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954575	A/turkey/Italy/17VIR576-11/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI954559	A/swan/Italy/17VIR537-2/2017 (A/H5N8) segment 4 (HA)	3059.2	0.000000e+00	1688/1704 (99%)
EPI869687	A/decoy_duck/France/161104e/2016 (A/H5N8) segment 4 (HA)	3055.5	0.000000e+00	1687/1704 (99%)
EPI1045611	A/chicken/Rostov/44/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019534	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI1019526	A/Eur_Wig/NL-Drieborg (Dollard)/16015513-001/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI990794	A/greylag goose/Germany-NI/AR1395-L02144/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI969347	A/turkey/Germany-BB/R377ff/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI961449	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI954813	A/Greylag_goose/Hungary/320/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI942935	A/turkey/England/003778/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI909452	A/wild duck/Tatarstan/3059/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI909444	A/mute swan/Krasnodar/25/2017 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI869931	A/turkey/Poland/83/2016 (A/H5N8) segment 4 (HA)	3053.6	0.000000e+00	1687/1704 (99%)
EPI869930	A/turkey/Poland/78/2016 (A/H5N8) segment 4 (HA)	3049.9	0.000000e+00	1686/1704 (98%)
EPI1019718	A/M_Swan/NL-Roggebotsluis/16014462-019/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019558	A/Eur_Wig/NL-Greonterp/16015653-001/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019494	A/Dk/NL-Stolwijk/16016291-016-020/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1019398	A/Ch/NL-Abbega/X16015736/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI1007667	A/chicken/Belgium/807/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI990802	A/greylag goose/Germany-NI/AR703-L02138/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI931145	A/duck/Czech Republic/1467-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI916604	A/bronze turkey/Czech Republic/1414-17/2017 (H5N8) (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI909436	A/goose/Krasnodar/3144/2017 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI859650	A/wild duck/Germany-BW/R8455/2016 (A/H5N8) segment 4 (HA)	3048.1	0.000000e+00	1686/1704 (98%)
EPI907346	A/domestic duck/Germany-BB/R681ff/2017 (A/H5N8) segment 4 (HA)	3044.4	0.000000e+00	1684/1702 (98%)
EPI1021106	A/mute swan/Czech Republic/1296-17_1/2017 (H5N8) (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1019766	A/T_Dk/NL-Almeerder Zand/16014341-003/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI969254	A/Tufted Duck/Switzerland/V237/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI931207	A/turkey/Germany-BB/R234ff/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909428	A/turkey/Rostov/11/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909404	A/chicken/Voronezh/18/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909396	A/long-eared owl/Voronezh/16/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909388	A/Ural owl/Voronezh/14/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI909380	A/long-eared owl/Voronezh/15/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI888088	A/wigeon/Italy/17VIR57-3/2017 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI869940	A/herring gull/Poland/84/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI869936	A/chicken/Kalmykia/2661/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI861011	A/turkey/Germany-SH/R8595/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI860401	A/tufted_duck/Germany/AR8459-L01988/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI859653	A/tufted_duck/Germany/AR8444-L01986/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI859212	A/tufted_duck/Germany-SH/R8446/2016 (A/H5N8) segment 4 (HA)	3042.6	0.000000e+00	1685/1704 (98%)
EPI1040223	A/chicken/Italy/17VIR3078/2017 (A/H5N8) segment 4 (HA)	3038.9	0.000000e+00	1684/1704 (98%)
EPI909364	A/tufted duck/Denmark/17740-1/2016 (A/H5N8) segment 4 (HA)	3038.9	0.000000e+00	1684/1704 (98%)
EPI1061371	A/chicken/Belgium/5990/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019878	A/Teal/NL-Ferwert/16015273-013/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019870	A/T_Dk/NL-Zuidoost Beemster/16014148-009/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019862	A/T_Dk/NL-Zuidoost Beemster/16014148-002/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019790	A/T_Dk/NL-Rotterdam/16014155-001/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019782	A/T_Dk/NL-Roggebotsluis/16014462-015/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019774	A/T_Dk/NL-Monnickendam/16013865-006-008/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019758	A/Sea_eagle/NL-Assen/16015398-002/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019750	A/P_falcon/NL-Vrouwenpolder (Zeeland)/16015510-001/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019726	A/Magpie/NL-Volendam/16014331-002/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019710	A/L-bl-ba-gull/NL-Sovon/16014324-014/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019702	A/Gull10/NL-Marker Wadden/16014466-014/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019670	A/Gr_bk_bd_gull/NL-Slootdorp/16014102-005/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019542	A/Eur_Wig/NL-Ferwert/16015273-002/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019446	A/Crow/NL-Oostwoud/16015372-004/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI1019382	A/Buzzard/NL-Durgerdam/16015100-004/2016 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954783	A/Common_tern/Hungary/8187/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)
EPI954671	A/Duck/Hungary/1588/2017 (A/H5N8) segment 4 (HA)	3037.0	0.000000e+00	1684/1704 (98%)

niman · January 26, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144336	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 6 (NA)	2603.0	0.000000e+00	1409/1409 (100%)
EPI1144352	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1123260	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 6 (NA)	2592.0	0.000000e+00	1407/1409 (99%)
EPI1123244	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1123236	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1119872	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1119864	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 6 (NA)	2586.4	0.000000e+00	1406/1409 (99%)
EPI1144344	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 6 (NA)	2580.9	0.000000e+00	1405/1409 (99%)
EPI1139716	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 6 (NA)	2564.3	0.000000e+00	1402/1409 (99%)
EPI1131098	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2560.6	0.000000e+00	1390/1392 (99%)
EPI1131090	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2551.3	0.000000e+00	1395/1402 (99%)
EPI1129918	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 6 (NA)	2462.7	0.000000e+00	1337/1339 (99%)
EPI1122895	A/chicken/Greece/39_2017b/2017 (A/H5N6) segment 6 (NA)	2442.4	0.000000e+00	1380/1409 (97%)
EPI1122887	A/chicken/Greece/39_2017a/2017 (A/H5N6) segment 6 (NA)	2438.7	0.000000e+00	1379/1409 (97%)
EPI1122879	A/chicken/Greece/39_2017/2017 (A/H5N6) segment 6 (NA)	2438.7	0.000000e+00	1379/1409 (97%)
EPI1129917	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 6 (NA)	2403.6	0.000000e+00	1315/1322 (99%)
EPI1127540	A/mute swan/Shimane/3211A001/2017 (A/H5N6) segment 6 (NA)	2403.6	0.000000e+00	1373/1409 (97%)
EPI1119073	A/spoonbill/Taiwan/DB645/2017 (A/H5N6) segment 6 (NA)	2398.1	0.000000e+00	1370/1406 (97%)
EPI1011098	A/barnacle goose/Netherlands/2/2014 (A/H3N6) segment 6 (NA)	2381.5	0.000000e+00	1371/1411 (97%)
EPI1036189	A/duck/Moscow/4652/2011 (A/H4N6) segment 6 (NA)	2300.2	0.000000e+00	1356/1411 (96%)
EPI890326	A/mallard duck/Netherlands/19/2012 (A/H4N6) segment 6 (NA)	2281.7	0.000000e+00	1353/1411 (95%)
EPI1036196	A/duck/Moscow/4781/2012 (A/H4N6) segment 6 (NA)	2276.2	0.000000e+00	1352/1411 (95%)
EPI1145199	A/teal/Croatia/86-25/2012 (A/H4N6) segment 6 (NA)	2270.7	0.000000e+00	1351/1411 (95%)
EPI891032	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 6 (NA)	2220.8	0.000000e+00	1343/1412 (95%)
EPI1133993	A/duck/Mongolia/262/2011 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823917	A/teal/Chany Lake/106_ cloaca/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823909	A/teal/Chany Lake/104_ feather/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823901	A/teal/Chany Lake/104_cloaca/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI823790	A/shoveller/Chany Lake/101/2012 (A/H4N6) segment 6 (NA)	2215.3	0.000000e+00	1343/1413 (95%)
EPI470232	A/duck/Yunnan/87/2007 (A/H7N6) segment 6 (NA)	2215.3	0.000000e+00	1342/1412 (95%)
EPI692466	A/duck/Henan/S1091/2010 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI533781	A/Caspian seal/Russia/T1/2012 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI533775	A/Caspian seal/Russia/1884/2002 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI485322	A/eurasian wigeon/Mongolia/340V/2009 (A/H4N6) segment 6 (NA)	2209.7	0.000000e+00	1341/1412 (94%)
EPI692506	A/duck/Hunan/S1012/2009 (A/H4N6) segment 6 (NA)	2198.6	0.000000e+00	1339/1412 (94%)
EPI1014700	A/mallard duck/Netherlands/7/2006 (A/H10N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI692346	A/chicken/Hunan/S1267/2010 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI692338	A/chicken/Hunan/S1248/2010 (A/H4N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI414148	A/duck/Jiangsu/4/2010 (A/H3N6) segment 6 (NA)	2193.1	0.000000e+00	1338/1412 (94%)
EPI407862	A/Khaki Campbell duck/Karachi/NARC-23963/2010 (A/H4N6) segment 6 (NA)	2189.4	0.000000e+00	1337/1412 (94%)
EPI372354	A/teal/Egypt/09888-NAMRU3/2005 (A/H4N6) segment 6 (NA)	2189.4	0.000000e+00	1338/1412 (94%)
EPI1013418	A/mallard duck/Netherlands/8/2006 (A/H10N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI395392	A/chicken/India/WB-NIV101006/2009 (A/H4N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI296530	A/mallard/Netherlands/4/2006 (A/H10N6) segment 6 (NA)	2187.6	0.000000e+00	1337/1412 (94%)
EPI890683	A/mallard duck/Netherlands/6/2006 (A/H4N6) segment 6 (NA)	2182.0	0.000000e+00	1336/1412 (94%)
EPI243479	A/duck/Vietnam/OIE-2454/2009 (A/H4N6) segment 6 (NA)	2182.0	0.000000e+00	1337/1413 (94%)
EPI401303	A/duck/Korea/DY104/2007 (A/H4N6) segment 6 (NA)	2176.5	0.000000e+00	1335/1412 (94%)
EPI168523	A/common pochard/Aktau/1455/2006 (A/H4N6) segment 6 (NA)	2170.9	0.000000e+00	1335/1413 (94%)
EPI168522	A/coot/Aktau/1454/2006 (A/H4N6) segment 6 (NA)	2165.4	0.000000e+00	1335/1414 (94%)
EPI513237	A/mallard/Sweden/104925/2009 (A/H4N6) segment 6 (NA)	2159.9	0.000000e+00	1333/1413 (94%)
EPI704432	A/duck/Mongolia/769/2015 (A/H4N6) segment 6 (NA)	2154.3	0.000000e+00	1334/1415 (94%)
EPI540366	A/duck/Bangladesh/1521/2009 (A/H4N6) segment 6 (NA)	2154.3	0.000000e+00	1332/1413 (94%)
EPI513749	A/mallard/Sweden/79978/2008 (A/H4N6) segment 6 (NA)	2148.8	0.000000e+00	1330/1412 (94%)
EPI485357	A/ruddy shelduck/Mongolia/592/2010 (A/H8N6) segment 6 (NA)	2148.8	0.000000e+00	1331/1413 (94%)
EPI395393	A/chicken/India/WB-NIV101018/2009 (A/H4N6) segment 6 (NA)	2143.2	0.000000e+00	1330/1413 (94%)
EPI889824	A/mallard duck/Netherlands/27/2009 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI513568	A/mallard/Sweden/80348/2008 (A/H0) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI513170	A/mallard/Sweden/105012/2009 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1329/1413 (94%)
EPI284397	A/mallard/Czech Republic/12652/2007 (A/H4N6) segment 6 (NA)	2137.7	0.000000e+00	1326/1409 (94%)
EPI704293	A/duck/Mongolia/127/2015 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1330/1415 (93%)
EPI704269	A/duck/Mongolia/101/2015 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1330/1415 (93%)
EPI618783	A/mallard/Sweden/93475/2009 (A/H10N6) segment 6 (NA)	2132.2	0.000000e+00	1329/1414 (93%)
EPI540374	A/duck/Bangladesh/1283/2008 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1329/1414 (93%)
EPI513546	A/mallard/Sweden/101010/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513461	A/mallard/Sweden/101632/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513454	A/mallard/Sweden/101603/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513433	A/mallard/Sweden/101564/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513431	A/mallard/Sweden/101785/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513415	A/mallard/Sweden/101733/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513408	A/mallard/Sweden/101663/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513394	A/mallard/Sweden/101654/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513358	A/mallard/Sweden/101831/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513341	A/mallard/Sweden/104681/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513230	A/mallard/Sweden/104839/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI513163	A/mallard/Sweden/105011/2009 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI470233	A/wild waterfowl/Hong Kong/MPM3375/2011 (A/H7N6) segment 6 (NA)	2132.2	0.000000e+00	1327/1412 (93%)
EPI461617	A/duck/Hunan/S11893/2012 (A/H4N6) segment 6 (NA)	2132.2	0.000000e+00	1328/1413 (93%)
EPI1013677	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI1011235	A/mallard duck/Netherlands/22/2011 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI692554	A/duck/Jiangxi/S2443/2012 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI540358	A/duck/Bangladesh/1766/2010 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1326/1412 (93%)
EPI514901	A/mallard/Sweden/105093/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513514	A/mallard/Sweden/101524/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513507	A/mallard/Sweden/101504/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513493	A/mallard/Sweden/101329/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513475	A/mallard/Sweden/101642/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513468	A/mallard/Sweden/101640/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513424	A/mallard/Sweden/101782/2009 (A/H0) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513386	A/mallard/Sweden/102029/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513379	A/mallard/Sweden/102024/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513334	A/mallard/Sweden/102157/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513327	A/mallard/Sweden/102124/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513320	A/mallard/Sweden/102114/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513306	A/mallard/Sweden/102045/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513244	A/mallard/Sweden/104931/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513216	A/mallard/Sweden/104793/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513209	A/mallard/Sweden/104690/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513205	A/mallard/Sweden/102250/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1328/1414 (93%)
EPI513184	A/mallard/Sweden/105516/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)
EPI513177	A/mallard/Sweden/105137/2009 (A/H4N6) segment 6 (NA)	2126.6	0.000000e+00	1327/1413 (93%)

niman · January 26, 2018

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI1144353	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1144345	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1144337	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1139717	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123256	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123240	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1123232	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1119865	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 7 (MP)	1814.5	0.000000e+00	982/982 (100%)
EPI1119873	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 7 (MP)	1809.0	0.000000e+00	981/982 (99%)
EPI1131091	A/Great Black-backed Gull/Netherlands/1/2017 (A/H5N6) segment 7 (MP)	1797.9	0.000000e+00	979/982 (99%)
EPI1032553	A/Mulard_duck/Hungary/59163/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032527	A/Mulard_duck/Hungary/62902/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032519	A/Mulard_duck/Hungary/60369/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032511	A/Goose/Hungary/59763/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032503	A/Goose/Hungary/17985/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032495	A/Goose/Hungary/17580/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032487	A/Goose/Hungary/17051/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1032479	A/Goose/Hungary/15729/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI962050	A/Duck/Hungary/55764/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI962039	A/Duck/Hungary/54738/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI961503	A/turkey/Italy/17VIR1574-1/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI959534	A/Mute swan/Hungary/6276/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI959427	A/chicken/Poland/79A/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI956123	A/Goose/Hungary/59712/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954832	A/Mute swan/Hungary/3137/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954730	A/Mute swan/Hungary/3513/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954722	A/Mute swan/Hungary/3139/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954714	A/Mute swan/Hungary/2825/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954682	A/Mute swan/Hungary/1955/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954650	A/Duck/Hungary/984/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954634	A/Harris Hawk/Hungary/120/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI954594	A/turkey/Italy/17VIR1338-3/2017 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI953518	A/mallard/Hungary/57857/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI866980	A/duck/Hungary/60441/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI860521	A/goose/Hungary/55128/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI860516	A/Mulard_duck/Hungary/54494/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI859202	A/mute_swan/Hungary/51049/2016 (A/H5N8) segment 7 (MP)	1759.1	0.000000e+00	973/983 (98%)
EPI1085345	A/goose/Czech Republic/136-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI969267	A/chicken/Czech Republic/2644-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI931199	A/chicken/Czech Republic/1896-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI931112	A/mute swan/Czech Republic/879-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI930844	A/chicken/Czech Republic/55-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI930839	A/mute swan/Czech Republic/54-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1757.3	0.000000e+00	972/982 (98%)
EPI1126346	A/mallard/Czech Republic/136-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1116593	A/mute swan/Czech Republic/54-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1087641	A/chicken/Czech Republic/988-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	971/982 (98%)
EPI1032471	A/Goose/Hungary/17261/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI1002886	A/black swan/Germany-BW/R1364/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI975870	A/white stork/Germany-TH/R1149/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI975869	A/tawny owl/Germany-SN/R1186/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	970/980 (98%)
EPI962060	A/Turkey/Hungary/53136/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI961520	A/chicken/Italy/17VIR1751-3/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI961512	A/chicken/Italy/17VIR1684-2/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959558	A/Rook/Hungary/4975/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959526	A/Mute swan/Hungary/6092/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959518	A/Cormorant/Hungary/6102/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI959421	A/domestic goose/Poland/33/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954864	A/White_fronted_goose/Hungary/801/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954840	A/Mallard/Hungary/5821/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954824	A/Chicken/Hungary/1751/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954746	A/Chicken/Hungary/2496/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954738	A/Mute swan/Hungary/3542/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954706	A/Mute swan/Hungary/2508/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954698	A/Mute swan/Hungary/2193/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954658	A/Goose/Hungary/1030/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954626	A/Mute swan/Hungary/119/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954586	A/turkey/Italy/17VIR973-2/2017 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI954534	A/Goose/Hungary/65817/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI869812	A/duck/France/161108h/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI859210	A/domestic_turkey/Hungary/53433/2016 (A/H5N8) segment 7 (MP)	1753.6	0.000000e+00	972/983 (98%)
EPI1127018	A/mallard/Czech Republic/1226-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126383	A/mallard/Czech Republic/1219-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126370	A/mute swan/Czech Republic/987-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126361	A/mute swan/Czech Republic/1156-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126360	A/mute swan/Czech Republic/1155-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126357	A/mute swan/Czech Republic/1060-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126351	A/mute swan/Czech Republic/967-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1126349	A/mute swan/Czech Republic/572-17_3/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1117249	A/mute swan/Czech Republic/964-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI1081897	A/turkey/Czech Republic/38-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI987885	A/chicken/Republic of Macedonia/AR1167-L02131/2017 (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI969264	A/chicken/Czech Republic/2643-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI969261	A/mute swan/Czech Republic/1813-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961530	A/goose/Czech Republic/821-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961487	A/mute swan/Czech Republic/581-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI961481	A/mute swan/Czech Republic/499-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI931196	A/chicken/Czech Republic/1863-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI930842	A/Indian Runner Duck/Czech Republic/749-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI919638	A/chicken/Czech Republic/585-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI917482	A/mute swan/Czech Republic/722-17_1/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI916524	A/mallard/Czech Republic/722-17_2/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI916387	A/mute swan/Czech Republic/653-17/2017 (H5N8) (A/H5N8) segment 7 (MP)	1751.7	0.000000e+00	971/982 (98%)
EPI888279	A/turkey/Czech Republic/38-17_5/2017 (H5N8) (A/H5N8) segment 7 (MP)	1749.9	0.000000e+00	970/982 (98%)
EPI1032543	A/Goose/Hungary/64909/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI1032535	A/Goose/Hungary/63743/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI1019529	A/Eur_Wig/NL-Enumatil-Groningen/16015704-001/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI961452	A/gadwall/Kurgan/2442/2016 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954816	A/GuineaFowl/Hungary/596/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954690	A/Turkey/Hungary/2030/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)
EPI954674	A/Greylag_goose/Hungary/1941/2017 (A/H5N8) segment 7 (MP)	1748.1	0.000000e+00	971/983 (98%)

niman · January 26, 2018

EPI1144331	A/mute_swan/England/AVP_18_001986/2017 (A/H5N6) segment 1 (PB2)	4211.5	0.000000e+00	2280/2280 (100%)
EPI1123242	A/Mute Swan/Netherlands/17017377-001/2017 (A/H5N6) segment 1 (PB2)	4205.9	0.000000e+00	2279/2280 (99%)
EPI1119867	A/Duck/Netherlands/17017237-001-005/2017 (A/H5N6) segment 1 (PB2)	4205.9	0.000000e+00	2279/2280 (99%)
EPI1119859	A/Duck/Netherlands/17017236-001-005/2017 (A/H5N6) segment 1 (PB2)	4205.9	0.000000e+00	2279/2280 (99%)
EPI1139711	A/common_pochard/Germany-BY/AR09-L02421/2017 (A/H5N6) segment 1 (PB2)	4200.4	0.000000e+00	2278/2280 (99%)
EPI1131093	A/Black-headed Gull/Netherlands/29/2017 (A/H5N6) segment 1 (PB2)	4200.4	0.000000e+00	2278/2280 (99%)
EPI1123258	A/Tufted Duck/Netherlands/17017367-007/2017 (A/H5N6) segment 1 (PB2)	4200.4	0.000000e+00	2278/2280 (99%)
EPI1123234	A/Mute Swan/Netherlands/17017367-012/2017 (A/H5N6) segment 1 (PB2)	4200.4	0.000000e+00	2278/2280 (99%)
EPI1144347	A/canada_goose/England/AV58_18OPpoolEP1/2018 (A/H5N6) segment 1 (PB2)	4191.2	0.000000e+00	2276/2280 (99%)
EPI1144339	A/pochard_duck/England/AVP_18_003254/2018 (A/H5N6) segment 1 (PB2)	4189.3	0.000000e+00	2276/2280 (99%)
EPI889820	A/mallard duck/Netherlands/15/2011 (A/H6N8) segment 1 (PB2)	3917.9	0.000000e+00	2227/2280 (97%)
EPI889410	A/Eurasian teal/Netherlands/1/2011 (A/H3N8) segment 1 (PB2)	3917.9	0.000000e+00	2227/2280 (97%)
EPI889594	A/mallard duck/Netherlands/20/2011 (A/H6N8) segment 1 (PB2)	3906.8	0.000000e+00	2225/2280 (97%)
EPI890266	A/greater white-fronted goose/Netherlands/6/2011 (A/H6N8) segment 1 (PB2)	3895.7	0.000000e+00	2223/2280 (97%)
EPI1010712	A/white-fronted goose/Netherlands/5/2011 (A/H6N8) segment 1 (PB2)	3884.6	0.000000e+00	2221/2280 (97%)
EPI1014087	A/mallard duck/Georgia/11/2011 (A/H1N1) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI1013538	A/mallard duck/Netherlands/18/2012 (A/H4N2) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI1011210	A/mallard duck/Netherlands/16/2012 (A/H3N2) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI618045	A/mallard/Republic of Georgia/12/2011 (A/H10N4) segment 1 (PB2)	3873.5	0.000000e+00	2219/2280 (97%)
EPI889776	A/mallard duck/Netherlands/32/2011 (A/H5N2) segment 1 (PB2)	3868.0	0.000000e+00	2219/2281 (97%)
EPI677988	A/chicken/Italy/13VIR4527-12/2013 (A/H7N7) segment 1 (PB2)	3862.5	0.000000e+00	2217/2280 (97%)
EPI560338	A/Italy/3/2013 (A/H7N7) segment 1 (PB2)	3862.5	0.000000e+00	2217/2280 (97%)
EPI678028	A/chicken/Italy/13VIR4541-7/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI678004	A/chicken/Italy/13VIR4541-32/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI677996	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3858.8	0.000000e+00	2216/2280 (97%)
EPI678076	A/chicken/Italy/13VIR5051-3/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678060	A/chicken/Italy/13VIR4774/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678052	A/chicken/Italy/13VIR4603-1/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678036	A/chicken/Italy/13VIR4541-8/2013 (A/H7N7) segment 1 (PB2)	3856.9	0.000000e+00	2216/2280 (97%)
EPI678012	A/chicken/Italy/13VIR4541-33/2013 (A/H7N7) segment 1 (PB2)	3855.1	0.000000e+00	2215/2280 (97%)
EPI678068	A/chicken/Italy/13VIR5051-1/2013 (A/H7N7) segment 1 (PB2)	3853.2	0.000000e+00	2215/2280 (97%)
EPI891105	A/mallard duck/Netherlands/23/2012 (A/H11N9) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI816828	A/turkey/Poland/14/2013 (A/H9N2) segment 1 (PB2)	3851.4	0.000000e+00	2216/2281 (97%)
EPI678084	A/chicken/Italy/13VIR5091/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678044	A/chicken/Italy/13VIR4541-9/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678020	A/chicken/Italy/13VIR4541-34/2013 (A/H7N7) segment 1 (PB2)	3851.4	0.000000e+00	2215/2280 (97%)
EPI678092	A/turkey/Italy/13VIR4678-1/2013 (A/H7N7) segment 1 (PB2)	3849.5	0.000000e+00	2214/2280 (97%)
EPI1013811	A/mallard duck/Netherlands/10/2013 (A/H4N6) segment 1 (PB2)	3845.8	0.000000e+00	2215/2281 (97%)
EPI341793	A/mallard/France/090360/2009 (A/H9N2) segment 1 (PB2)	3845.8	0.000000e+00	2214/2280 (97%)
EPI773762	A/chicken/Netherlands/16007311-037041/2016 (A/H7N9) segment 1 (PB2)	3840.3	0.000000e+00	2213/2280 (97%)
EPI774511	A/chicken/Netherlands/15007212/15 (A/H10N7) segment 1 (PB2)	3823.7	0.000000e+00	2210/2280 (96%)
EPI617974	A/common Teal/Republic of Georgia/1/2011 (A/H3N8) segment 1 (PB2)	3823.7	0.000000e+00	2211/2281 (96%)
EPI718523	A/Anas platyrhynchos/Belgium/17330cls42/2013 (A/H5N2) segment 1 (PB2)	3818.1	0.000000e+00	2209/2280 (96%)
EPI890191	A/mallard duck/Netherlands/30/2014 (A/H4N6) segment 1 (PB2)	3812.6	0.000000e+00	2208/2280 (96%)
EPI816836	A/turkey/Poland/08/2014 (A/H9N2) segment 1 (PB2)	3812.6	0.000000e+00	2208/2280 (96%)
EPI816844	A/turkey/Poland/09/2014 (A/H9N2) segment 1 (PB2)	3808.9	0.000000e+00	2207/2280 (96%)
EPI617882	A/mallard/Republic of Georgia/13/2011 (A/H6N2) segment 1 (PB2)	3807.1	0.000000e+00	2207/2280 (96%)
EPI1036183	A/duck/Moscow/4652/2011 (A/H4N6) segment 1 (PB2)	3803.4	0.000000e+00	2206/2280 (96%)
EPI687184	A/chicken/Scotland/532/2016 (A/H5N1) segment 1 (PB2)	3796.0	0.000000e+00	2198/2270 (96%)
EPI1133958	A/duck/Mongolia/27/2011 (A/H3N8) segment 1 (PB2)	3790.4	0.000000e+00	2204/2280 (96%)
EPI839725	A/chicken/France/150169a/2015 (A/H5N1) segment 1 (PB2)	3773.8	0.000000e+00	2202/2281 (96%)
EPI890883	A/greater white-fronted goose/Netherlands/2/2007 (A/H6N8) segment 1 (PB2)	3768.3	0.000000e+00	2200/2280 (96%)
EPI1014358	A/mallard duck/Netherlands/18/2014 (A/H1N1) segment 1 (PB2)	3762.7	0.000000e+00	2199/2280 (96%)
EPI174657	A/duck/Hunan/689/2006 (A/H5N1) segment 1 (PB2)	3746.1	0.000000e+00	2196/2280 (96%)
EPI221999	A/environment/Hunan/1-8/2007 (A/H5N1) segment 1 (PB2)	3740.6	0.000000e+00	2195/2280 (96%)
EPI174670	A/chicken/Hunan/3157/2006 (A/H5N1) segment 1 (PB2)	3735.0	0.000000e+00	2195/2281 (96%)
EPI484292	A/chicken/Italy/13VIR4527-11/2013 (A/H7N7) segment 1 (PB2)	3731.4	0.000000e+00	2149/2214 (97%)
EPI174669	A/chicken/Hubei/3002/2007 (A/H5N1) segment 1 (PB2)	3729.5	0.000000e+00	2193/2280 (96%)
EPI174668	A/duck/Hubei/2911/2007 (A/H5N1) segment 1 (PB2)	3729.5	0.000000e+00	2193/2280 (96%)
EPI174667	A/chicken/Hubei/2856/2007 (A/H5N1) segment 1 (PB2)	3729.5	0.000000e+00	2193/2280 (96%)
EPI174665	A/duck/Hunan/1964/2007 (A/H5N1) segment 1 (PB2)	3729.5	0.000000e+00	2193/2280 (96%)
EPI222147	A/lesser kestrel/Heilongjiang/194/2007 (A/H5N1) segment 1 (PB2)	3724.0	0.000000e+00	2192/2280 (96%)
EPI839733	A/duck/France/150233/2015 (A/H5N2) segment 1 (PB2)	3718.4	0.000000e+00	2191/2280 (96%)
EPI823778	A/environment/Kamchatka/24/2016 (A/H13N8) segment 1 (PB2)	3718.4	0.000000e+00	2191/2280 (96%)
EPI823762	A/environment/Kamchatka/23/2016 (A/H13N8) segment 1 (PB2)	3714.7	0.000000e+00	2190/2280 (96%)
EPI839741	A/duck/France/150236/2015 (A/H5N9) segment 1 (PB2)	3712.9	0.000000e+00	2190/2280 (96%)
EPI262682	A/aquatic bird/Korea/w120/2006 (A/H5N2) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI262680	A/aquatic bird/Korea/w113/2006 (A/H5N2) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI173585	A/swine/Korea/C12/2008 (A/H5N2) segment 1 (PB2)	3712.9	0.000000e+00	2191/2281 (96%)
EPI1013684	A/mallard duck/Netherlands/40/2011 (A/H7N1) segment 1 (PB2)	3707.3	0.000000e+00	2190/2281 (96%)
EPI1013496	A/mallard duck/Netherlands/48/2011 (A/H7N1) segment 1 (PB2)	3707.3	0.000000e+00	2190/2281 (96%)
EPI889596	A/mallard duck/Netherlands/8/2012 (A/H1N1) segment 1 (PB2)	3707.3	0.000000e+00	2189/2280 (96%)
EPI809271	A/pigeon/Egypt/S10409A/2014 (A/H9N2) segment 1 (PB2)	3707.3	0.000000e+00	2190/2281 (96%)
EPI262683	A/aquatic bird/Korea/w121/2006 (A/H5N2) segment 1 (PB2)	3707.3	0.000000e+00	2190/2281 (96%)
EPI1011215	A/mallard duck/Netherlands/45/2011 (A/H8N1) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI940605	A/guinea fowl/France/150207n/2015 (A/H5N9) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI890747	A/mallard duck/Netherlands/44/2011 (A/H7N1) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI889269	A/mallard duck/Netherlands/31/2012 (A/H7N1) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI889248	A/mallard duck/Netherlands/43/2011 (A/H7N1) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI262681	A/aquatic bird/Korea/w114/2006 (A/H5N2) segment 1 (PB2)	3701.8	0.000000e+00	2189/2281 (95%)
EPI174662	A/duck/Henan/1652/2006 (A/H5N1) segment 1 (PB2)	3696.3	0.000000e+00	2187/2280 (95%)
EPI174660	A/duck/Henan/1647/2006 (A/H5N1) segment 1 (PB2)	3696.3	0.000000e+00	2188/2281 (95%)
EPI961485	A/environment/Kamchatka/117/2016 (A/H13N8) segment 1 (PB2)	3690.7	0.000000e+00	2186/2280 (95%)
EPI167950	A/long-tailed shrike/Hong Kong/2762/2007 (A/H5N1) segment 1 (PB2)	3687.0	0.000000e+00	2170/2257 (96%)
EPI222581	A/scaly-breasted munia/Hong Kong/45/2007 (A/H5N1) segment 1 (PB2)	3685.2	0.000000e+00	2175/2265 (96%)
EPI220527	A/environment/Hunan/6-69/2008 (A/H5N1) segment 1 (PB2)	3685.2	0.000000e+00	2185/2280 (95%)
EPI809383	A/pigeon/Egypt/S10408B/2014 (A/H9N2) segment 1 (PB2)	3668.6	0.000000e+00	2184/2282 (95%)
EPI1087898	A/ Quail /Egypt/1253V/2016 (A/H9N2) segment 1 (PB2)	3635.3	0.000000e+00	2176/2280 (95%)
EPI1086370	A/Chicken/Egypt/374V/2016 (A/H9N2) segment 1 (PB2)	3635.3	0.000000e+00	2178/2282 (95%)
EPI1006524	A/duck/Guangxi/015D2/2009 (A/H3N2) segment 1 (PB2)	3635.3	0.000000e+00	2176/2280 (95%)
EPI167855	A/crested goshawk/Hong Kong/458/2007 (A/H5N1) segment 1 (PB2)	3629.8	0.000000e+00	2139/2226 (96%)
EPI316548	A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 1 (PB2)	3579.9	0.000000e+00	2166/2280 (95%)
EPI401812	A/green-winged teal/Xianghai/430/2011 (A/H5N2) segment 1 (PB2)	3574.4	0.000000e+00	2165/2280 (94%)
EPI534805	A/duck/Zhejiang/D18/2013 (A/H3N3) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI534804	A/duck/Zhejiang/D17/2013 (A/H3N3) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI534803	A/duck/Zhejiang/D16/2013 (A/H3N3) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI534800	A/duck/Zhejiang/D13/2013 (A/H3N2) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI534799	A/duck/Zhejiang/D11/2013 (A/H3N2) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI469171	A/wild duck/Guangdong/520/2001 (A/H1N9) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)
EPI99874	A/duck/Denmark/65047/04 (A/H5N2) segment 1 (PB2)	3568.8	0.000000e+00	2164/2280 (94%)

2018 H5N6 Wild Bird Sequences In Dorset England

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