nCoV Sequences of First Two Cases In Paris 32M & 31F Match

[niman]

Media reports indicated that the first two nCoV cases in Paris were related.  The Pasteur Institute released full sequences from two patients (32M and 31F) at Bichat Claude Bernard Hospital,  which were identical.

[niman]

ame:	BetaCoV/France/IDF0372/2020
Accession ID:	EPI_ISL_406596
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-01-23
Location:	France / Ile-de-France / Paris
Host:	Human
Additional location information:
Gender:	female
Patient age:	31
Patient status:	unknown
Specimen source:	Oro-Pharyngeal swab
Additional host information:
Outbreak:
Last vaccinated:
Treatment:
Sequencing technology:	Illumina NextSeq 500
Assembly method:	CLC Genomics Workbench 20
Coverage:	500x
Institute information
Originating lab:	Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
Address:	46, rue Henri Huchard 75018 Paris France
Sample ID given by the sample provider:	8014056458
Submitting lab:	National Reference Center for Viruses of Respiratory Infections, Institut Pasteur, Paris
Address:	28, rue du Docteur Roux 75015 Paris France
Sample ID given by the submitting laboratory:	20200372
Authors:	Mélanie Albert, Marion Barbet, Sylvie Behillil, Méline Bizard, Angela Brisebarre, Flora Donati, Vincent Enouf, Maud Vanpeene, Sylvie van der Werf
Submitter information
Submitter:	Vincent Enouf
Submission Date:	2020-01-29
Address:	28, rue du Docteur Roux 75015 Paris France

FASTA

>BetaCoV/France/IDF0372/2020|EPI_ISL_406596

[niman]

Virus detail
Virus name:	BetaCoV/France/IDF0373/2020
Accession ID:	EPI_ISL_406597
Type:	betacoronavirus
Passage details/history:	Original
Sample information
Collection date:	2020-01-23
Location:	France / Ile-de-France / Paris
Host:	Human
Additional location information:
Gender:	male
Patient age:	32
Patient status:	unknown
Specimen source:	Orao-pharungeal swab
Additional host information:	Patient infected in Wuhan, China
Outbreak:
Last vaccinated:
Treatment:
Sequencing technology:	Illumina NextSeq 500
Assembly method:	CLC Genomics Workbench 20
Coverage:	500x
Institute information
Originating lab:	Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
Address:	46, rue Henri Huchard 75018 Paris France
Sample ID given by the sample provider:	8014056484
Submitting lab:	National Reference Center for Viruses of Respiratory Infections, Institut Pasteur, Paris
Address:	28 rue du Docteur Roux 75015 Paris France
Sample ID given by the submitting laboratory:	20200373
Authors:	Mélanie Albert, Marion Barbet, Sylvie Behillil, Méline Bizard, Angela Brisebarre, Flora Donati, Vincent Enouf, Maud Vanpeene, Sylvie van der Werf, Yazdan Yazdanpanah,
Submitter information
Submitter:	Vincent Enouf
Submission Date:	2020-01-29
Address:	rue du Docteur Roux 75015 Paris France

FASTA

>BetaCoV/France/IDF0373/2020|EPI_ISL_406597

[niman]

France was the first European country to report imported cases of the new coronavirus. The first three were people who had recently been to China.

https://www.lemonde.fr/planete/article/2020/01/29/coronavirus-en-chine-plusieurs-centaines-de-rapatriements-premiers-cas-au-proche-orient_6027700_3244.html