niman Posted September 19, 2023 Report Share Posted September 19, 2023 PA-CDC-LC1057572/2023 Pennsylvania Collected 9/2/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I Link to comment Share on other sites More sharing options...
niman Posted September 19, 2023 Author Report Share Posted September 19, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.307740148079745%2C-76.65021318887914&z=8 Link to comment Share on other sites More sharing options...
niman Posted October 2, 2023 Author Report Share Posted October 2, 2023 isolate SARS-CoV-2/Human/USA/PA-CDC-LC1057572/2023 collected by Laboratory Corporation of America collection date 2023-09-02 isolation source Nasal Swabs geographic location USA: Pennsylvania host Homo sapiens host disease COVID-19 host sex female host age 75 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_gene_name_1 N1 gene diagnostic_pcr_protocol_1 Labcorp LDT diagnostic_pcr_Ct_value_1 19.788 diagnostic_gene_name_2 N2 gene diagnostic_pcr_protocol_2 Labcorp LDT diagnostic_pcr_Ct_value_2 17.483 diagnostic_gene_name_3 RP gene diagnostic_pcr_protocol_3 Labcorp LDT diagnostic_pcr_Ct_value_3 27.199 lineage/clade name BA.2.86 Submission CDC-OAMD; 2023-09-19 Accession: SAMN37447578 ID: 37447578 https://www.ncbi.nlm.nih.gov/biosample/SAMN37447578 Link to comment Share on other sites More sharing options...
niman Posted October 2, 2023 Author Report Share Posted October 2, 2023 PA-CDC-LC1057572/2023 Pennsylvania Collected 9/2/23 75F Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I Link to comment Share on other sites More sharing options...
niman Posted October 2, 2023 Author Report Share Posted October 2, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.20510675312596%2C-75.66401861284179&z=13 Link to comment Share on other sites More sharing options...
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