niman Posted September 26, 2023 Report Share Posted September 26, 2023 NY-CDC-QDX84783166/2023 New York 9/5/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C Link to comment Share on other sites More sharing options...
niman Posted September 26, 2023 Author Report Share Posted September 26, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.6471479232209%2C-74.91860012382351&z=8 Link to comment Share on other sites More sharing options...
niman Posted September 28, 2023 Author Report Share Posted September 28, 2023 isolate SARS-CoV-2/Human/USA/NY-CDC-QDX84783166/2023 collected by Quest Diagnostics Incorporated collection date 2023-09-05 isolation source Nasal Swabs geographic location USA: New York host Homo sapiens host disease COVID-19 host sex male host age 40 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.2.86 https://www.ncbi.nlm.nih.gov/biosample/SAMN37536552 Link to comment Share on other sites More sharing options...
niman Posted September 28, 2023 Author Report Share Posted September 28, 2023 NY-CDC-QDX84783166/2023 New York 9/5/23 collection 40M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C Link to comment Share on other sites More sharing options...
niman Posted September 28, 2023 Author Report Share Posted September 28, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.6471479232209%2C-74.91860012382351&z=8 Link to comment Share on other sites More sharing options...
niman Posted October 1, 2023 Author Report Share Posted October 1, 2023 NY-CDC-QDX84783166/2023 New York 9/5/23 collection 40M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C NSP14 S221A Link to comment Share on other sites More sharing options...
niman Posted October 1, 2023 Author Report Share Posted October 1, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.668168043518904%2C-74.33518879842407&z=9 Link to comment Share on other sites More sharing options...
niman Posted October 1, 2023 Author Report Share Posted October 1, 2023 NY-CDC-QDX84783166/2023 New York 9/5/23 collection 40M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C NSP1 H110Q NSP8 S8F NSP14 S221A NSP14 N408K C25549T (ORF3a) T27134C ( M) Link to comment Share on other sites More sharing options...
niman Posted October 1, 2023 Author Report Share Posted October 1, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.751839246789814%2C-74.36265461873657&z=9 Link to comment Share on other sites More sharing options...
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