niman Posted October 8, 2023 Report Share Posted October 8, 2023 (edited) USA/MN-CDC-VSX-A09453/2023 Minnesota 9/21/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 Edited October 8, 2023 by niman Link to comment Share on other sites More sharing options...
niman Posted October 8, 2023 Author Report Share Posted October 8, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=45.823000964564486%2C-93.62925802773437&z=8 Link to comment Share on other sites More sharing options...
niman Posted October 8, 2023 Author Report Share Posted October 8, 2023 isolate SARS-CoV-2/Human/USA/MN-CDC-VSX-A09453/2023 collected by Helix collection date 2023-09-21 isolation source swab geographic location USA: Minnesota host Homo sapiens host disease COVID-19 host sex male host age 68 collection device Swab collection method Swab purpose of sequencing baseline surveillance (random sampling) host_race White diagnostic_gene_name_1 N diagnostic_pcr_protocol_1 Helix COVID-19 and Flu Test diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 ORF1ab diagnostic_pcr_protocol_2 Helix COVID-19 and Flu Test diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 S diagnostic_pcr_protocol_3 Helix COVID-19 and Flu Test diagnostic_pcr_Ct_value_3 Unknown lineage/clade name BA.2.86 https://www.ncbi.nlm.nih.gov/biosample/37721361 Link to comment Share on other sites More sharing options...
niman Posted October 8, 2023 Author Report Share Posted October 8, 2023 USA/MN-CDC-VSX-A09453/2023 Minnesota 9/21/23 collection 68M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 T3565C (NSP3) NSP4 D217G Link to comment Share on other sites More sharing options...
niman Posted October 8, 2023 Author Report Share Posted October 8, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=45.21114476757108%2C-94.01927264218749&z=8 Link to comment Share on other sites More sharing options...
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