May 2015 Clade 2.3.2 H5N1 In Iraq Poultry

niman · July 8, 2015

Central Veterinary Laboratory in Kurdistan Region in Iraq has released N1 sequences from H5N1` poultry collections in May 2015 which match 2015 clade 2.3.2 sequences.

Edited July 8, 2015 by niman

niman · July 8, 2015

LOCUS       KT070699                 610 bp    cRNA    linear   VRL 01-JUL-2015
DEFINITION  Influenza A virus (A/turkey/Iraq/KCVL-III/2015(H5N1)) segment 6
            neuraminidase (NA) gene, partial cds.
ACCESSION   KT070699
VERSION     KT070699.1  GI:851895770
KEYWORDS    .
SOURCE      Influenza A virus (A/turkey/Iraq/KCVL-III/2015(H5N1))
  ORGANISM  Influenza A virus (A/turkey/Iraq/KCVL-III/2015(H5N1))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Dizayee,B.A., Khlef,E.L. and Sdeq,D.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2015) PCR Department, Central Veterinary
            Laboratory in Kurdistan Region, Nishtiman Qs., Erbil, Kurdistan
            00044, Iraq
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Influenza A virus
                     (A/turkey/Iraq/KCVL-III/2015(H5N1))"
                     /mol_type="viral cRNA"
                     /strain="A/turkey/Iraq/KCVL-III/2015"
                     /serotype="H5N1"
                     /host="turkey"
                     /db_xref="taxon:1665631"
                     /segment="6"
                     /country="Iraq"
                     /collection_date="06-May-2015"
     gene            <1..>610
                     /gene="NA"
     CDS             <1..>610
                     /gene="NA"
                     /codon_start=3
                     /product="neuraminidase"
                     /protein_id="AKN58568.1"
                     /db_xref="GI:851895771"
                     /translation="AWSASACHDGTSWLTIGISGPDNGAVAVLKYNGIITDTIKSWRN
                     NILRTQESECACVNGSCFTVMTDGPSNGQASYKIFKIEKGKVVKSVELNAPNYHYEEC
                     SCYPEAGEIICVCRDNWHGSNRPWVSFNQNLEYQIGYICSGVFGDNPRPNDGTGSCGP
                     VSSNGAYGVKGFSFKYGNGVWIGRTKSTHSRSGFEMIWDPNG"
ORIGIN      
        1 ttgcttggtc agcaagtgct tgccatgatg gcaccagttg gttgacaatt gggatttctg
       61 gtccagacaa tggggctgtg gcggtattga aatacaatgg cataataaca gacactatca
      121 agagttggag gaataacata ctgaggaccc aagagtctga atgtgcatgt gtgaatggct
      181 cttgctttac tgttatgaca gatggaccaa gtaatgggca ggcatcatat aagattttca
      241 aaatagaaaa agggaaagta gttaagtcag tcgaattgaa tgcccccaat tatcactatg
      301 aggaatgctc ctgttatcct gaggctggcg aaatcatatg tgtgtgcagg gataattggc
      361 atggctcaaa caggccatgg gtgtctttca atcagaattt ggagtatcaa ataggatata
      421 tttgcagtgg agttttcggt gacaatccac ggccgaatga cggtacaggg agttgtggac
      481 cagtgtcctc taacggggca tatggggtaa aagggttctc atttaaatat ggcaatggtg
      541 tctggatcgg gaggaccaaa agcactcatt ccaggagcgg ctttgaaatg atttgggatc
      601 caaatgggtg

niman · July 8, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI621545	A/turkey/Iraq/KCVL-III/2015 (A/H5N1) segment 6 (NA)	1127.6	0.000000e+00	610/610 (100%)
EPI621544	A/chicken/Iraq/KCVL-II/2015 (A/H5N1) segment 6 (NA)	1105.4	0.000000e+00	603/605 (99%)
EPI621543	A/chicken/Iraq/KCVL-I/2015 (A/H5N1) segment 6 (NA)	1101.7	0.000000e+00	604/608 (99%)
EPI621174	A/chicken/Jiangsu/2477/2014 (A/H5N1) segment 6 (NA)	1099.9	0.000000e+00	605/610 (99%)
EPI567305	A/chicken/Nigeria/15VIR339-2/2015 (A/H5N1) segment 6 (NA)	1094.3	0.000000e+00	604/610 (99%)
EPI500773	A/Alberta/01/2014 (A/H5N1) segment 6 (NA)	1074.0	0.000000e+00	600/610 (98%)
EPI559154	A/chicken/Vietnam/NCVD-KA435/2013 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI559149	A/muscovy duck/Vietnam/NCVD-KA395/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI559141	A/duck/Vietnam/NCVD-KA300/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI545491	A/duck/Khanhhoa/CVVI-19/2013 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI503722	A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI438144	A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425687	A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425655	A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425631	A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425623	A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425311	A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI425159	A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424983	A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424743	A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424735	A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424198	A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424190	A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424182	A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI424174	A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI417809	A/duck/Vietnam/OIE-2212/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI417798	A/duck/Vietnam/OIE-2236/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI417780	A/duck/Vietnam/OIE-2211/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI408417	A/duck/Vietnam/OIE-2202/2012 (A/H5N1) segment 6 (NA)	1061.1	0.000000e+00	598/610 (98%)
EPI559153	A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI559147	A/chicken/Vietnam/NCVD-KA365/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI559144	A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI559139	A/muscovy duck/Vietnam/NCVD-KA286/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI559138	A/chicken/Vietnam/NCVD-KA275/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI559137	A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545517	A/duck/Khanhhoa/CVVI-45/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545516	A/chicken/Khanhhoa/CVVI-44/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545514	A/chicken/Khanhhoa/CVVI-42/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545512	A/chicken/Khanhhoa/CVVI-40/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545511	A/chicken/Khanhhoa/CVVI-39/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545498	A/duck/Khanhhoa/CVVI-26/2014 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545492	A/duck/Khanhhoa/CVVI-20/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545482	A/duck/Khanhhoa/CVVI-10/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545479	A/duck/Khanhhoa/CVVI-07/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545475	A/duck/Khanhhoa/CVVI-03/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI545474	A/chicken/Khanhhoa/CVVI-02/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI531374	A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI461024	A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI460950	A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI460942	A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425930	A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425922	A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425679	A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425647	A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425639	A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425271	A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425183	A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425143	A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI425015	A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI424991	A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI424703	A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 6 (NA)	1055.6	0.000000e+00	597/610 (97%)
EPI589837	A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 6 (NA)	1051.9	0.000000e+00	595/608 (97%)
EPI589831	A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 6 (NA)	1051.9	0.000000e+00	595/608 (97%)
EPI459249	A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 6 (NA)	1051.9	0.000000e+00	595/608 (97%)
EPI459241	A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 6 (NA)	1051.9	0.000000e+00	595/608 (97%)
EPI559146	A/duck/Vietnam/NCVD-KA345/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI559145	A/duck/Vietnam/NCVD-KA324/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545513	A/chicken/Khanhhoa/CVVI-41/2014 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545501	A/duck/Khanhhoa/CVVI-29/2014 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545495	A/duck/Khanhhoa/CVVI-23/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545494	A/duck/Khanhhoa/CVVI-22/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545493	A/duck/Khanhhoa/CVVI-21/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545486	A/duck/Khanhhoa/CVVI-14/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545485	A/chicken/Khanhhoa/CVVI-13/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545484	A/chicken/Khanhhoa/CVVI-12/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545483	A/chicken/Khanhhoa/CVVI-11/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI545480	A/duck/Khanhhoa/CVVI-08/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI462794	A/mynah/Austria-quarantine/13064792-010/13 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI461538	A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI438152	A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425938	A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425671	A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425303	A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425175	A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425151	A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425135	A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425111	A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425023	A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI424727	A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI424719	A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI424711	A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI424687	A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 6 (NA)	1050.0	0.000000e+00	596/610 (97%)
EPI425103	A/duck/Vietnam/NCVD-1497/2012 (A/H5N1) segment 6 (NA)	1046.3	0.000000e+00	594/608 (97%)
EPI545518	A/duck/Khanhhoa/CVVI-46/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545515	A/chicken/Khanhhoa/CVVI-43/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545510	A/duck/Khanhhoa/CVVI-38/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545509	A/duck/Khanhhoa/CVVI-37/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545507	A/duck/Khanhhoa/CVVI-35/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545506	A/duck/Khanhhoa/CVVI-34/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)
EPI545502	A/duck/Khanhhoa/CVVI-30/2014 (A/H5N1) segment 6 (NA)	1044.5	0.000000e+00	595/610 (97%)

Alignments

niman · July 8, 2015

LOCUS       KT070697                 775 bp    cRNA    linear   VRL 01-JUL-2015
DEFINITION  Influenza A virus (A/chicken/Iraq/KCVL-I/2015(H5N1)) segment 6
            neuraminidase (NA) gene, partial cds.
ACCESSION   KT070697
VERSION     KT070697.1  GI:851895716
KEYWORDS    .
SOURCE      Influenza A virus (A/chicken/Iraq/KCVL-I/2015(H5N1))
  ORGANISM  Influenza A virus (A/chicken/Iraq/KCVL-I/2015(H5N1))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Dizayee,B.A., Khlef,E.L. and Sdeq,D.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUN-2015) PCR Department, Central Veterinary
            Laboratory in Kurdistan Region, Nishtiman Qs., Erbil, Kurdistan
            00044, Iraq
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Influenza A virus
                     (A/chicken/Iraq/KCVL-I/2015(H5N1))"
                     /mol_type="viral cRNA"
                     /strain="A/chicken/Iraq/KCVL-I/2015"
                     /serotype="H5N1"
                     /host="chicken"
                     /db_xref="taxon:1665629"
                     /segment="6"
                     /country="Iraq"
                     /collection_date="07-May-2015"
     gene            <1..>775
                     /gene="NA"
     CDS             <1..>775
                     /gene="NA"
                     /codon_start=3
                     /product="neuraminidase"
                     /protein_id="AKN58566.1"
                     /db_xref="GI:851895717"
                     /translation="AWSASACHDGTSWLKIEIPGPDNGAVAVLKYNGIITDTIKSWRN
                     NILRTQESECACVNGSCFTVMTDGPSNGQASYKIFKIEKGKVVKSVELNAPNYHYEEC
                     SCYPEAGEIICVCRDNWHGSNRPWVSFNQNLEYQIGYICSGVFGDNPRPNDGTGSCGP
                     VSSNGAYGVKGFSFKYGNGVWIGRTKSTHSRSGFEMIWDPNGGNLTDSEFSMKQDIVA
                     ITDWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKEST"
ORIGIN      
        1 ttgcttggtc agcaagtgct tgccatgatg gcaccagttg gttgaaaatt gaaattcctg
       61 gtccagacaa tggggctgtg gcggtattga aatacaatgg cataataaca gacactatca
      121 agagttggag gaataacata ctgaggaccc aagagtctga atgtgcatgt gtgaatggct
      181 cttgctttac tgttatgaca gatggaccaa gtaatgggca ggcatcatat aagattttca
      241 aaatagaaaa agggaaagta gttaagtcag tcgaattgaa tgcccccaat tatcactatg
      301 aggaatgctc ctgttatcct gaggctggcg aaatcatatg tgtgtgcagg gataattggc
      361 atggctcaaa caggccatgg gtgtctttca atcagaattt ggagtatcaa ataggatata
      421 tttgcagtgg agttttcggt gacaatccac ggccgaatga cggtacaggg agttgtggac
      481 cagtgtcctc taacggggca tatggggtaa aagggttctc atttaaatat ggcaatggtg
      541 tctggatcgg gaggaccaaa agcactcatt ccaggagcgg ctttgaaatg atttgggatc
      601 caaatggggg gaacttgacg gacagtgaat tttcgatgaa acaagatata gtagcaataa
      661 ctgattggtc aggatatagc gggagttttg tccagcatcc agaactgaca ggattagatt
      721 gcataagacc ttgcttctgg gttgagttaa tcagagggcg gcccaaagag agcac

niman · July 8, 2015

Descriptions

Segment-ID	Name	Score	E-Value	Identity
EPI621543	A/chicken/Iraq/KCVL-I/2015 (A/H5N1) segment 6 (NA)	1432.3	0.000000e+00	775/775 (100%)
EPI621174	A/chicken/Jiangsu/2477/2014 (A/H5N1) segment 6 (NA)	1365.8	0.000000e+00	764/776 (98%)
EPI567305	A/chicken/Nigeria/15VIR339-2/2015 (A/H5N1) segment 6 (NA)	1349.2	0.000000e+00	761/776 (98%)
EPI500773	A/Alberta/01/2014 (A/H5N1) segment 6 (NA)	1339.9	0.000000e+00	759/776 (97%)
EPI559149	A/muscovy duck/Vietnam/NCVD-KA395/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI559141	A/duck/Vietnam/NCVD-KA300/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI503722	A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI425687	A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI425655	A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI425631	A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI425623	A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI425159	A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424983	A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424743	A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424735	A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424198	A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424190	A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424182	A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI424174	A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI417809	A/duck/Vietnam/OIE-2212/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI417798	A/duck/Vietnam/OIE-2236/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI417780	A/duck/Vietnam/OIE-2211/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI408417	A/duck/Vietnam/OIE-2202/2012 (A/H5N1) segment 6 (NA)	1332.6	0.000000e+00	758/776 (97%)
EPI559154	A/chicken/Vietnam/NCVD-KA435/2013 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI559138	A/chicken/Vietnam/NCVD-KA275/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI545514	A/chicken/Khanhhoa/CVVI-42/2014 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI545512	A/chicken/Khanhhoa/CVVI-40/2014 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI545511	A/chicken/Khanhhoa/CVVI-39/2014 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI545491	A/duck/Khanhhoa/CVVI-19/2013 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI531374	A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI462794	A/mynah/Austria-quarantine/13064792-010/13 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI461024	A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI460950	A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI460942	A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI438144	A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI425930	A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI425922	A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI425679	A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI425311	A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI425143	A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI424991	A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 6 (NA)	1327.0	0.000000e+00	757/776 (97%)
EPI559153	A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI559147	A/chicken/Vietnam/NCVD-KA365/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI559144	A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI559139	A/muscovy duck/Vietnam/NCVD-KA286/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI559137	A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI545517	A/duck/Khanhhoa/CVVI-45/2014 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI545516	A/chicken/Khanhhoa/CVVI-44/2014 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI545513	A/chicken/Khanhhoa/CVVI-41/2014 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI545501	A/duck/Khanhhoa/CVVI-29/2014 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI545498	A/duck/Khanhhoa/CVVI-26/2014 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI462790	A/mynah/Austria-quarantine/13063485-025/13 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI425647	A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI425639	A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI425183	A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI425111	A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI425015	A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI424703	A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI424687	A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 6 (NA)	1321.5	0.000000e+00	756/776 (97%)
EPI462792	A/mynah/Austria-quarantine/13063485-026/13 (A/H5N1) segment 6 (NA)	1317.8	0.000000e+00	755/776 (97%)
EPI559146	A/duck/Vietnam/NCVD-KA345/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI559145	A/duck/Vietnam/NCVD-KA324/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545515	A/chicken/Khanhhoa/CVVI-43/2014 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545510	A/duck/Khanhhoa/CVVI-38/2014 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545509	A/duck/Khanhhoa/CVVI-37/2014 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545507	A/duck/Khanhhoa/CVVI-35/2014 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545502	A/duck/Khanhhoa/CVVI-30/2014 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545493	A/duck/Khanhhoa/CVVI-21/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545492	A/duck/Khanhhoa/CVVI-20/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545482	A/duck/Khanhhoa/CVVI-10/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545479	A/duck/Khanhhoa/CVVI-07/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545478	A/duck/Khanhhoa/CVVI-06/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545475	A/duck/Khanhhoa/CVVI-03/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI545474	A/chicken/Khanhhoa/CVVI-02/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI489679	A/tiger/Jiangsu/01/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI461538	A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425938	A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425671	A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425303	A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425271	A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425175	A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425151	A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425135	A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI425023	A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI424727	A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI424719	A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI424711	A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 6 (NA)	1315.9	0.000000e+00	755/776 (97%)
EPI589837	A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 6 (NA)	1312.2	0.000000e+00	753/774 (97%)
EPI589831	A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 6 (NA)	1312.2	0.000000e+00	753/774 (97%)
EPI459249	A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 6 (NA)	1312.2	0.000000e+00	753/774 (97%)
EPI459241	A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 6 (NA)	1312.2	0.000000e+00	753/774 (97%)
EPI425487	A/duck/Vietnam/NCVD-927/2011 (A/H5N1) segment 6 (NA)	1312.2	0.000000e+00	754/776 (97%)
EPI567039	A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)
EPI559160	A/chicken/Vietnam/NCVD-A937/2011 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)
EPI545519	A/duck/Phuyen/CVVI-47/2014 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	755/777 (97%)
EPI545518	A/duck/Khanhhoa/CVVI-46/2014 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)
EPI545506	A/duck/Khanhhoa/CVVI-34/2014 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)
EPI545503	A/chicken/Khanhhoa/CVVI-31/2014 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	755/777 (97%)
EPI545495	A/duck/Khanhhoa/CVVI-23/2013 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)
EPI545494	A/duck/Khanhhoa/CVVI-22/2013 (A/H5N1) segment 6 (NA)	1310.4	0.000000e+00	754/776 (97%)

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May 2015 Clade 2.3.2 H5N1 In Iraq Poultry

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