2015 Chicken H5N1 In Indonesia Is Clade 2.3.2

niman · August 4, 2015

PT Sanbio Laboratories release partial 2015 chicken sequence from Tangerang - clade 2.3.2.

Edited August 4, 2015 by niman

niman · August 4, 2015

LOCUS       KT245169                 642 bp    cRNA    linear   VRL 02-AUG-2015
DEFINITION  Influenza A virus (A/chicken/Tangerang/SBO-0069-04/2015(H5N1))
            segment 4 hemagglutinin (HA) gene, partial cds.
ACCESSION   KT245169
VERSION     KT245169.1  GI:906489067
KEYWORDS    .
SOURCE      Influenza A virus (A/chicken/Tangerang/SBO-0069-04/2015(H5N1))
  ORGANISM  Influenza A virus (A/chicken/Tangerang/SBO-0069-04/2015(H5N1))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Syamsidar,S., Nurhandayani,A., Kusumastuti,A. and Ong,S.
  TITLE     Avian influenza identification
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Syamsidar,S., Nurhandayani,A., Kusumastuti,A. and Ong,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUL-2015) Research and Development, PT Sanbio
            Laboratories, Jl. Melati, Kampung Wanaherang, RT2/RW9, Bogor, Jawa
            Barat 16965, Indonesia
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Influenza A virus
                     (A/chicken/Tangerang/SBO-0069-04/2015(H5N1))"
                     /mol_type="viral cRNA"
                     /strain="A/chicken/Tangerang/SBO-0069-04/2015"
                     /serotype="H5N1"
                     /isolation_source="cloacal swab"
                     /host="chicken"
                     /db_xref="taxon:1678785"
                     /segment="4"
                     /country="Indonesia"
                     /collection_date="17-Apr-2015"
     gene            <1..>642
                     /gene="HA"
     CDS             <1..>642
                     /gene="HA"
                     /codon_start=1
                     /product="hemagglutinin"
                     /protein_id="AKS48058.1"
                     /db_xref="GI:906489068"
                     /translation="QSGRIDFFWTILKPNDAIHFESNGNFIAPEYAYKIVKKGDSTIM
                     RSEVEYGNCNTRCQTPIGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPQR
                     ERRRKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKV
                     NSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAGLLVLLENKR"
ORIGIN      
        1 caaagtggca ggatagattt cttctggaca attttaaaac cgaatgacgc aatccacttc
       61 gagagtaatg gaaatttcat tgctccagaa tatgcataca aaattgtcaa gaaaggagac
      121 tccacaatca tgagaagtga agtggaatat ggtaactgca ataccaggtg tcagactcca
      181 ataggggcga taaactctag tatgccattc cacaacatac accccctcac catcggagaa
      241 tgtcccaaat atgtgaaatc aaacaaatta gtccttgcaa ctgggctcag aaatagtcct
      301 caaagagaga gaagaagaaa aagaggactg tttggagcta tagcaggttt tatagaggga
      361 ggatggcagg gaatggtaga tggttggtat gggtaccacc acagcaatga gcaggggagt
      421 ggttatgctg cagacaaaga atctactcaa aaggcgatag acggagtcac taataaggtc
      481 aattcgatca ttgacaaaat gaacactcag tttgaagctg taggaaggga gtttaataac
      541 ttagagagga gaatagaaaa tttaaacaag aagatggaag acggattcct agatgtctgg
      601 acttataatg ctggactcct agttctattg gaaaataaaa ga

niman · August 4, 2015

Segment-ID	Name	Score	E-Value	Identity
EPI537680	A/Environment/East Java/LBM-LM13/2012 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI462795	A/mynah/Austria-quarantine/13064792-010/13 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI462793	A/mynah/Austria-quarantine/13063485-026/13 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI462791	A/mynah/Austria-quarantine/13063485-025/13 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI416768	A/duck/Blitar/BBVW-1731-11/2012 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI416766	A/duck/Tegal/BBVW-1727-11/2012 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI416763	A/duck/Sukoharjo/BBVW-1428-9/2012 (A/H5N1) segment 4 (HA)	1109.1	0.000000e+00	625/637 (98%)
EPI416767	A/duck/Wonogiri/BBVW-1730-11/2012 (A/H5N1) segment 4 (HA)	1103.6	0.000000e+00	624/637 (97%)
EPI416765	A/duck/Sleman/BBVW-1463-10/2012 (A/H5N1) segment 4 (HA)	1103.6	0.000000e+00	624/637 (97%)
EPI559089	A/duck/Vietnam/NCVD-KA324/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI559087	A/duck/Vietnam/NCVD-KA311/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI559084	A/duck/Vietnam/NCVD-KA300/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI559081	A/duck/Vietnam/NCVD-KA262/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI545430	A/duck/Khanhhoa/CVVI-05/2013 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI545429	A/duck/Khanhhoa/CVVI-04/2013 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI545426	A/duck/Khanhhoa/CVVI-01/2013 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI531373	A/hill myna/Heilongjiang/0704/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI461536	A/muscovy duck/Vietnam/LBM344/2013 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI461022	A/duck/Vietnam/QB1207/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425939	A/duck/Vietnam/NCVD-1875/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425931	A/duck/Vietnam/NCVD-1544/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425680	A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425672	A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425624	A/duck/Vietnam/NCVD-1930/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425304	A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425272	A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425176	A/chicken/Vietnam/NCVD-1942/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425160	A/duck/Vietnam/NCVD-1937/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425152	A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425136	A/duck/Vietnam/NCVD-1899/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425128	A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI424744	A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI424728	A/duck/Vietnam/NCVD-1898/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI424720	A/duck/Vietnam/NCVD-1897/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI424712	A/duck/Vietnam/NCVD-1896/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI424704	A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI416780	A/muscovy duck/Tegal/BBVW-1732-11/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI416764	A/duck/Bantul/BBVW-1443-9/2012 (A/H5N1) segment 4 (HA)	1098.0	0.000000e+00	623/637 (97%)
EPI425640	A/duck/Vietnam/NCVD-1931/2012 (A/H5N1) segment 4 (HA)	1094.3	0.000000e+00	622/637 (97%)
EPI567003	A/duck/Vietnam/LBM360c1-4-1/2013 (A/H5N6) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI559108	A/muscovy duck/Vietnam/NCVD-KA395/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI559091	A/chicken/Vietnam/NCVD-KA365/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI559088	A/muscovy duck/Vietnam/NCVD-KA286/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI559082	A/chicken/Vietnam/NCVD-KA275/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545446	A/duck/Khanhhoa/CVVI-21/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545445	A/duck/Khanhhoa/CVVI-20/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545442	A/duck/Khanhhoa/CVVI-17/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545441	A/duck/Khanhhoa/CVVI-16/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545439	A/duck/Khanhhoa/CVVI-14/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545438	A/chicken/Khanhhoa/CVVI-13/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545437	A/chicken/Khanhhoa/CVVI-12/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545436	A/chicken/Khanhhoa/CVVI-11/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545435	A/duck/Khanhhoa/CVVI-10/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545433	A/duck/Khanhhoa/CVVI-08/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545428	A/duck/Khanhhoa/CVVI-03/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI545427	A/chicken/Khanhhoa/CVVI-02/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI503718	A/Japanese white-eye/Taoyuan/Q454/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI460948	A/muscovy duck/Vietnam/LBM399/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI460940	A/muscovy duck/Vietnam/LBM398/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI460730	A/muscovy duck/Vietnam/LBM335/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI459864	A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425923	A/duck/Vietnam/NCVD-1547/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425688	A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425648	A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425632	A/duck/Vietnam/NCVD-1928/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425312	A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425184	A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425112	A/duck/Vietnam/NCVD-1943/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425024	A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI425016	A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI424992	A/duck/Vietnam/NCVD-1607/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI424984	A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI417807	A/duck/Vietnam/OIE-2212/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI408415	A/duck/Vietnam/OIE-2202/2012 (A/H5N1) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI405753	A/chicken/Vietnam/OIE-2215/2012 (A/H5N2) segment 4 (HA)	1092.5	0.000000e+00	622/637 (97%)
EPI424736	A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 4 (HA)	1088.8	0.000000e+00	621/637 (97%)
EPI567037	A/muscovy duck/Quang Ninh/48c1-4-1/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI559095	A/chicken/Vietnam/NCVD-KA432/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI559090	A/duck/Vietnam/NCVD-KA345/2012 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545469	A/chicken/Khanhhoa/CVVI-44/2014 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545467	A/chicken/Khanhhoa/CVVI-42/2014 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545451	A/duck/Khanhhoa/CVVI-26/2014 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545434	A/chicken/Khanhhoa/CVVI-09/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545432	A/duck/Khanhhoa/CVVI-07/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545431	A/duck/Khanhhoa/CVVI-06/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI461488	A/duck/Quanh Ninh/53/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI460932	A/muscovy duck/Quanh Ninh/49/2013 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI425656	A/duck/Vietnam/NCVD-1968/2012 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI425144	A/duck/Vietnam/NCVD-1933/2012 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI417778	A/duck/Vietnam/OIE-2211/2012 (A/H5N1) segment 4 (HA)	1087.0	0.000000e+00	621/637 (97%)
EPI545461	A/duck/Khanhhoa/CVVI-36/2014 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI545459	A/duck/Khanhhoa/CVVI-34/2014 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI545453	A/chicken/Khanhhoa/CVVI-28/2014 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI545448	A/duck/Khanhhoa/CVVI-23/2013 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI545447	A/duck/Khanhhoa/CVVI-22/2013 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	621/638 (97%)
EPI545444	A/duck/Khanhhoa/CVVI-19/2013 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI545440	A/duck/Khanhhoa/CVVI-15/2013 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI438150	A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI438142	A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI424688	A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI424196	A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI424188	A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI424180	A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI424172	A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI417796	A/duck/Vietnam/OIE-2236/2012 (A/H5N1) segment 4 (HA)	1081.4	0.000000e+00	620/637 (97%)
EPI621173	A/chicken/Jiangsu/2477/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI590073	A/duck/Quang Ninh/19c511/2013 (A/H5N8) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI589835	A/duck/Quang Ninh/15c111/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI589829	A/muscovy duck/Quang Ninh/7c121/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI567070	A/muscovy duck/Vietnam/LBM670/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	620/638 (97%)
EPI567050	A/muscovy duck/Vietnam/LBM669/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	620/638 (97%)
EPI567044	A/muscovy duck/Vietnam/LBM668/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	620/638 (97%)
EPI567020	A/duck/Quang Ninh/13c1-2-1/2013 (A/H5N2) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI559205	A/duck/Vietnam/NCVD-KA415/2012 (A/H5N2) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI545471	A/duck/Khanhhoa/CVVI-46/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI545457	A/duck/Khanhhoa/CVVI-32/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI545450	A/duck/Khanhhoa/CVVI-25/2014 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI489677	A/tiger/Jiangsu/01/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI464565	A/Environment/Huzhou/C291-7/2013 (A/H5) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI464564	A/Environment/Huzhou/C291-6/2013 (A/H5) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI459257	A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI459247	A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI459239	A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 4 (HA)	1075.9	0.000000e+00	619/637 (97%)
EPI624914	A/Vietnam/14011801/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI615127	A/duck/TienGiang/16/2013 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI615126	A/duck/TienGiang/15/2013 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545468	A/chicken/Khanhhoa/CVVI-43/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545462	A/duck/Khanhhoa/CVVI-37/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545460	A/duck/Khanhhoa/CVVI-35/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545456	A/chicken/Khanhhoa/CVVI-31/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545455	A/duck/Khanhhoa/CVVI-30/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545454	A/duck/Khanhhoa/CVVI-29/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI545452	A/chicken/Khanhhoa/CVVI-27/2014 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI471173	A/muscovy duck/Vietnam/LBM436/2013 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI464558	A/Environment/Huzhou/C291-10/2013 (A/H5) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI335442	A/environment/Chang Sha/1/2009 (A/H5N1) segment 4 (HA)	1070.3	0.000000e+00	618/637 (97%)
EPI621165	A/chicken/Jiangsu/927/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI621163	A/chicken/Jiangsu/2540/2014 (A/H0) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI615130	A/environment/TienGiang/3/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI615125	A/duck/TienGiang/14/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI615124	A/duck/TienGiang/13/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI615121	A/duck/TienGiang/10/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI615116	A/duck/TienGiang/9/2013 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI567116	A/muscovy duck/Long An/90/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI567109	A/muscovy duck/Long An/89/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI567089	A/muscovy duck/Long An/88/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI567084	A/muscovy duck/Long An/87/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI567077	A/muscovy duck/Long An/86/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI545472	A/duck/Phuyen/CVVI-47/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI545466	A/chicken/Khanhhoa/CVVI-41/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI545465	A/chicken/Khanhhoa/CVVI-40/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI545464	A/chicken/Khanhhoa/CVVI-39/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI545463	A/duck/Khanhhoa/CVVI-38/2014 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI393413	A/environment/Chang Sha/4/2009 (A/H5N1) segment 4 (HA)	1064.8	0.000000e+00	617/637 (96%)
EPI620925	A/bar-headed goose/Mongolia/X53/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615189	A/duck/TienGiang/1/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615132	A/duck/TienGiang/4/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615131	A/environment/TienGiang/4/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615128	A/environment/TienGiang/1/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615123	A/duck/TienGiang/12/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615122	A/duck/TienGiang/11/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615120	A/duck/TienGiang/8/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615119	A/duck/TienGiang/7/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615118	A/duck/TienGiang/6/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615115	A/duck/TienGiang/3/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615114	A/duck/TienGiang/2/2013 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI594560	A/pelican/Romania/12449/2015 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI592605	A/dalmatian pelican/Bulgaria/4/2015 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI592416	A/dalmatian pelican/Bulgaria/3/2015 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI553316	A/Duck/Shandong/Y02/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI502782	A/brown-headed gull/Qinghai/19/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI502781	A/brown-headed gull/Qinghai/9/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI502780	A/great black-headed gull/Qinghai/8/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI475587	A/wild duck/Jilin/HF/2011 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI475571	A/wild duck/Shandong/2/2011 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI401562	A/black swan/Yamaguchi/1/2011 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI359869	A/chicken/Korea/Iksan/2010 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI354427	A/great black-headed gull/Qinghai/3/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI354425	A/great black-headed gull/1/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI354423	A/brown-headed gull/Qinghai/1/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI335440	A/environment/Chang Sha/3/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	620/643 (96%)
EPI335245	A/ruddy shelduck/Mongolia/911T/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI300764	A/common goldeneye/Mongolia/X59/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI300763	A/common goldeneye/Mongolia/X60/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI300762	A/bar-headed goose/Mongolia/X54/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI300761	A/bar-headed goose/Mongolia/X53/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI300760	A/bar-headed goose/Mongolia/X25/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI296713	A/Hong Kong/6841/2010 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI289695	A/ruddy shelduck/Mongolia/X42/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI259006	A/great crested-grebe/Qinghai/1/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219355	A/rubby shelduck/Mongolia/X63/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219350	A/rubby shelduck/Mongolia/X42/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219326	A/common goldeneye/Mongolia/X60/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219321	A/common goldeneye/Mongolia/X59/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219313	A/bar-headed goose/Mongolia/X54/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219308	A/bar-headed goose/Mongolia/X53/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI219303	A/bar-headed goose/Mongolia/X25/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI186947	A/bean goose/Tyva/10/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI185237	A/black-headed gull/Tyva/115/2009 (A/H5N1) segment 4 (HA)	1059.3	0.000000e+00	616/637 (96%)
EPI615129	A/environment/TienGiang/2/2013 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	616/638 (96%)
EPI615117	A/duck/TienGiang/5/2013 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI594492	A/chicken/Bulgaria/5409/15 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI594491	A/chicken/Bulgaria/5408/15 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI594490	A/chicken/Bulgaria/5407/15 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI548439	A/herring gull/Mongolia/833T2/2009 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI545458	A/duck/Khanhhoa/CVVI-33/2014 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI510434	A/chicken/Bangladesh/15083/2012 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI510418	A/chicken/Bangladesh/15079/2012 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI500771	A/Alberta/01/2014 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI447463	A/mandarin duck/Korea/PSC24-24/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401571	A/mandarin duck/Miyazaki/22M-765/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401570	A/chicken/Chiba/2/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401569	A/chicken/Chiba/1/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401564	A/chicken/Wakayama/1/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401563	A/chicken/Aichi/2/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401522	A/chicken/Miyazaki/8/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401519	A/chicken/Miyazaki/TA3/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401518	A/chicken/Miyazaki/N7/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401517	A/chicken/Miyazaki/K3/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401515	A/chicken/Miyazaki/S4/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401514	A/mute swan/Toyama/1/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI401431	A/chicken/Kagoshima/I-2/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI398773	A/hooded crane/Kagoshima/4612J004/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI398766	A/hooded crane/Kagoshima/4612J003/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI398759	A/hooded crane/Kagoshima/4612J001/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI398744	A/hooded crane/Kagoshima/2/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI398737	A/hooded crane/Kagoshima/1/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395461	A/peregrine falcon/Nagasaki/4202A039/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395460	A/little grebe/Miyazaki/22M718/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395453	A/mandarin duck/Miyazaki/22M765/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395452	A/mandarin duck/Oita/4402F041/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395446	A/peregrine falcon/Miyazaki/22M684/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395444	A/mandarin duck/Nagasaki/4201A012/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395411	A/tufted duck/Shimane/5501A008/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395410	A/peregrine falcon/Miyazaki/22M771/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395408	A/mandarin duck/Miyazaki/22M686/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395407	A/little grebe/Hyogo/2801B015/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395406	A/common pochard/Hyogo/2801B004/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI395401	A/mute swan/Hyogo/2802F001/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359890	A/whooper swan/Korea/Q28/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359889	A/white fronted goose/Korea/Q27/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359887	A/turkey/Korea/DDC518/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359885	A/pheasant/Korea/PT411/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359884	A/mandarin duck/Korea/Q525/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359883	A/mandarin duck/Korea/Q2/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359881	A/eurasian eagle owl/Korea/Q196/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359876	A/duck/Korea/Cheonan/2010 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359874	A/duck/Korea/AS117/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359873	A/common Ketrel/Korea/Q197/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)
EPI359870	A/chicken/Korea/PT412/2011 (A/H5N1) segment 4 (HA)	1053.7	0.000000e+00	615/637 (96%)

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2015 Chicken H5N1 In Indonesia Is Clade 2.3.2

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