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Wuhan Coronavirus 2019-nCoV Sequences


niman

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The first novel coronavirus has been released (WH-Human_1`|China|2019-Dec).  This thread will analyze additional sequences.

 

 
 
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10th January 2020
This posting is communicated by Edward C. Holmes, University of Sydney on behalf of the consortium led by Professor Yong-Zhen Zhang, Fudan University, Shanghai

The Shanghai Public Health Clinical Center & School of Public Health, in collaboration with the Central Hospital of Wuhan, Huazhong University of Science and Technology, the Wuhan Center for Disease Control and Prevention, the National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control, and the University of Sydney, Sydney, Australia is releasing a coronavirus genome from a case of a respiratory disease from the Wuhan outbreak. The sequence has also been deposited on GenBank (accession MN908947) and will be released as soon as possible.

The sequence can be downloaded here:

WH-Human_1.fasta.gz (8.9 KB – this is a fasta file compressed using gzip. Uncompress using gzip -d WH-Human_1.fasta.gz)

Disclaimer:
Please feel free to download, share, use, and analyze this data. We ask that you communicate with us if you wish to publish results that use these data in a journal. If you have any other questions –then please also contact us directly.

Professor Yong-Zhen Zhang,
Shanghai Public Health Clinical Center & School of Public Health,
Fudan University,
Shanghai, China.

email: [email protected]

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Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
26936 35297 93% 0.0 89.12% MG772933.1
22223 35237 92% 0.0 88.65% MG772934.1
15213 22494 86% 0.0 82.34% AY395003.1
15213 22529 86% 0.0 82.34% AY394996.1
15202 22524 86% 0.0 82.33% AY304488.1
15202 22509 87% 0.0 82.33% AY304486.1
15191 22507 86% 0.0 82.32% AY390556.1
15186 22443 86% 0.0 82.32% EU371564.1
15186 22206 86% 0.0 82.31% AY394985.1
15186 22507 86% 0.0 82.32% AY278554.2
15180 22507 86% 0.0 82.31% EU371559.1
15180 22480 86% 0.0 82.31% AY559093.1
15180 22496 86% 0.0 82.31% AY394994.1
15180 22456 86% 0.0 82.31% AY394986.1
15176 22605 89% 0.0 82.32% MK211376.1
15176 22473 89% 0.0 82.30% KY417146.1
15175 22411 86% 0.0 82.30% JX163927.1
15175 22419 86% 0.0 82.30% JX163926.1
15175 22411 86% 0.0 82.30% JX163923.1
15175 22496 86% 0.0 82.30% JQ316196.1
15175 22444 86% 0.0 82.30% FJ882963.1
15175 22496 86% 0.0 82.30% DQ898174.1
15175 22502 86% 0.0 82.30% AY864806.1
15175 22496 86% 0.0 82.30% AY714217.1
15175 22489 86% 0.0 82.30% AY559096.1
15175 22474 86% 0.0 82.30% AY559095.1
15175 22478 86% 0.0 82.30% AY559086.1
15175 22474 86% 0.0 82.30% AY559085.1
15175 22480 86% 0.0 82.30% AY559084.1
15175 22476 86% 0.0 82.30% AY559083.1
15175 22474 86% 0.0 82.30% AY559082.1
15175 22491 86% 0.0 82.30% AY274119.3
15175 22502 86% 0.0 82.30% AY323977.2
15175 22502 86% 0.0 82.30% AY291451.1
15175 22496 86% 0.0 82.30% AY502928.1
15175 22489 86% 0.0 82.30% AY502926.1
15175 22502 86% 0.0 82.30% AY502923.1
15175 22441 86% 0.0 82.30% AY394999.1
15175 22491 86% 0.0 82.30% AY394998.1
15175 22485 86% 0.0 82.30% AY394995.1
15175 22491 86% 0.0 82.31% AY394993.1
15175 22496 86% 0.0 82.31% AY394992.1
15175 22496 86% 0.0 82.30% AY394991.1
15175 22478 86% 0.0 82.30% AY394987.1
15175 22465 86% 0.0 82.30% AY394983.1
15175 22391 86% 0.0 82.30% AY394978.1
15175 22487 86% 0.0 82.30% AY357075.1
15175 22491 86% 0.0 82.30% AY282752.2
15175 22496 86% 0.0 82.30% AY427439.1
15175 22502 86% 0.0 82.30% AY283796.1
15175 22502 86% 0.0 82.30% AP006561.1
15173 22409 86% 0.0 82.30% JX163925.1
15171 22419 86% 0.0 82.30% JX163928.1
15169 22415 86% 0.0 82.30% JX163924.1
15169 22409 86% 0.0 82.30% GU553363.1
15169 22463 86% 0.0 82.30% EU371563.1
15169 22468 86% 0.0 82.30% EU371561.1
15169 22468 86% 0.0 82.30% EU371560.1
15169 22496 86% 0.0 82.30% AY864805.1
15169 22502 86% 0.0 82.30% AY278741.1
15169 22483 86% 0.0 82.29% AY559087.1
15169 22491 86% 0.0 82.30% AY394989.1
15169 22485 86% 0.0 82.30% AY485278.1
15167 22489 86% 0.0 82.29% AY502927.1
15165 22400 86% 0.0 82.29% GU553365.1
15163 21667 83% 0.0 82.29% KJ473816.1
15158 22457 86% 0.0 82.29% EU371562.1
15149 22390 87% 0.0 82.29% MK211377.1
15134 22310 85% 0.0 82.26% KY417145.1
15117 22358 87% 0.0 82.26% MK211375.1
15084 16324 63% 0.0 82.35% KF294455.1
15043 21828 85% 0.0 82.18% JX993988.1
14970 22299 85% 0.0 82.20% KJ473814.1
14916 22120 85% 0.0 82.16% DQ648857.1
14892 21814 86% 0.0 82.00% JX993987.1
14759 23734 90% 0.0 81.89% KF294457.1
14731 21823 85% 0.0 82.02% MK211374.1
14722 21320 85% 0.0 81.82% KJ473813.1
14683 21222 85% 0.0 81.79% KJ473812.1
14683 21061 85% 0.0 81.79% KJ473811.1
14683 21924 87% 0.0 81.82% GQ153542.1
14678 21962 86% 0.0 81.82% GQ153543.1
14628 21379 85% 0.0 81.74% KY770860.1
14556 21331 86% 0.0 81.66% DQ648856.1
14556 21327 86% 0.0 81.66% DQ412042.1
14550 21797 87% 0.0 81.68% GQ153547.1
14539 15829 64% 0.0 81.66% KF294456.1
14517 21803 87% 0.0 81.65% FJ211859.1
14512 21784 87% 0.0 81.64% DQ084199.1
14506 21758 87% 0.0 81.63% GQ153540.1
14506 21764 87% 0.0 81.63% GQ153539.1
14501 21747 87% 0.0 81.63% GQ153546.1
14501 21786 87% 0.0 81.63% DQ022305.2
14501 21779 87% 0.0 81.63% DQ084200.1
14495 21736 87% 0.0 81.63% GQ153548.1
14495 21764 87% 0.0 81.62% GQ153541.1
14484 21725 87% 0.0 81.61% GQ153545.1
14484 21725 87% 0.0 81.61% GQ153544.1
13501 20234 77% 0.0 82.94% KU182964.1
13452 20134 77% 0.0 82.88% KY938558.1
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Top match at Genbank

Bat SARS-like coronavirus isolate bat-SL-CoVZC45, complete genome

GenBank: MG772933.1

FASTA Graphics

LOCUS       MG772933               29802 bp    RNA     linear   VRL 28-MAR-2018
DEFINITION  Bat SARS-like coronavirus isolate bat-SL-CoVZC45, complete genome.
ACCESSION   MG772933
VERSION     MG772933.1
KEYWORDS    .
SOURCE      Bat SARS-like coronavirus
  ORGANISM  Bat SARS-like coronavirus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus.
REFERENCE   1  (bases 1 to 29802)
  AUTHORS   Hu,D.
  TITLE     Genomic Characterization and Infectivity of A Novel SARS-like
            coronavirus in Chinese Bats
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 29802)
  AUTHORS   Hu,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2018) Institute of Military Medicine Nanjing
            Command, Nanjing, Institute of Military Medicine Nanjing Command,
            Nanjing, NO. 293 East Zhongshan Road, Nanjing, JangSu 210002, China
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
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Bat SARS-like coronavirus isolate bat-SL-CoVZXC21, complete genome

GenBank: MG772934.1

FASTA Graphics

LOCUS       MG772934               29732 bp    RNA     linear   VRL 28-MAR-2018
DEFINITION  Bat SARS-like coronavirus isolate bat-SL-CoVZXC21, complete genome.
ACCESSION   MG772934
VERSION     MG772934.1
KEYWORDS    .
SOURCE      Bat SARS-like coronavirus
  ORGANISM  Bat SARS-like coronavirus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus.
REFERENCE   1  (bases 1 to 29732)
  AUTHORS   Hu,D.
  TITLE     Genomic Characterization and Infectivity of A Novel SARS-like
            coronavirus in Chinese Bats
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 29732)
  AUTHORS   Hu,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2018) Institute of Military Medicine Nanjing
            Command, Nanjing, Institute of Military Medicine Nanjing Command,
            Nanjing, NO. 293 East Zhongshan Road, Nanjing, JangSu 210002, China
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
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SARS coronavirus ZS-C, complete genome

GenBank: AY395003.1

FASTA Graphics

LOCUS       AY395003               29647 bp    RNA     linear   VRL 29-JAN-2004
DEFINITION  SARS coronavirus ZS-C, complete genome.
ACCESSION   AY395003
VERSION     AY395003.1
KEYWORDS    .
SOURCE      SARS coronavirus ZS-C
  ORGANISM  SARS coronavirus ZS-C
            Viruses; Riboviria; Nidovirales; Cornidovirineae; Coronaviridae;
            Orthocoronavirinae; Betacoronavirus; Sarbecovirus.
REFERENCE   1  (bases 1 to 29647)
  CONSRTM   The SARS epidemiology consortium of Guangdong
  TITLE     From independent foci of epidemic outbreak to large genomic
            alteration in late phase viruses: evolution of the SARS-coronavirus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 29647)
  CONSRTM   The SARS epidemiology consortium of Guangdong
  TITLE     Direct Submission
  JOURNAL   Submitted (19-SEP-2003) Guangdong, China
FEATURES             Location/Qualifiers
     source          1..29647
                     /organism="SARS coronavirus ZS-C"
                     /mol_type="genomic RNA"
                     /isolate="ZS-C"
                     /db_xref="taxon:249088"
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LOCUS       AY304488               29731 bp    RNA     linear   VRL 05-NOV-2003
DEFINITION  SARS coronavirus SZ16, complete genome.
ACCESSION   AY304488
VERSION     AY304488.1
KEYWORDS    .
SOURCE      Civet SARS CoV SZ16/2003
  ORGANISM  Civet SARS CoV SZ16/2003
            Viruses; Riboviria; Nidovirales; Cornidovirineae; Coronaviridae;
            Orthocoronavirinae; Betacoronavirus; Sarbecovirus.
REFERENCE   1  (bases 1 to 29731)
  AUTHORS   Guan,Y., Zheng,B.J., He,Y.Q., Liu,X.L., Zhuang,Z.X., Cheung,C.L.,
            Luo,S.W., Li,P.H., Zhang,L.J., Guan,Y.J., Butt,K.M., Wong,K.L.,
            Chan,K.W., Lim,W., Shortridge,K.F., Yuen,K.Y., Peiris,J.S. and
            Poon,L.L.
  TITLE     Isolation and characterization of viruses related to the SARS
            coronavirus from animals in southern China
  JOURNAL   Science 302 (5643), 276-278 (2003)
   PUBMED   12958366
REFERENCE   2  (bases 1 to 29731)
  AUTHORS   Guan,Y. and Zheng,B.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2003) Microbiology, The University of Hong Kong,
            University Pathology Building, Queen Mary Hospital, Pokfulam Road,
            Hong Kong, China
FEATURES             Location/Qualifiers
     source          1..29731
                     /organism="Civet SARS CoV SZ16/2003"
                     /mol_type="genomic RNA"
                     /isolate="SZ16"
                     /db_xref="taxon:231515"
                     /country="Hong Kong"
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LOCUS       AY278554               29736 bp    RNA     linear   VRL 31-JUL-2003
DEFINITION  SARS coronavirus CUHK-W1, complete genome.
ACCESSION   AY278554
VERSION     AY278554.2
KEYWORDS    .
SOURCE      SARS coronavirus CUHK-W1
  ORGANISM  SARS coronavirus CUHK-W1
            Viruses; Riboviria; Nidovirales; Cornidovirineae; Coronaviridae;
            Orthocoronavirinae; Betacoronavirus; Sarbecovirus.
REFERENCE   1  (bases 1 to 29736)
  AUTHORS   Tsui,S.K., Chim,S.S. and Lo,Y.M.
  CONSRTM   Chinese University of Hong Kong Molecular SARS Research Group
  TITLE     Coronavirus genomic-sequence variations and the epidemiology of the
            severe acute respiratory syndrome
  JOURNAL   N. Engl. J. Med. 349 (2), 187-188 (2003)
   PUBMED   12853594
REFERENCE   2  (bases 1 to 29736)
  AUTHORS   Tsui,S.K.W., Lo,Y.M.D., Tam,J.S., Fung,K.P., Chim,S.S.C., Au,C.C.,
            Chan,A.H., Wan,A.W.K., Au,K.W., Chan,C.W., Kou,C.Y.C., Lam,H.M.,
            Lam,W.Y., Lau,S.K., Lau,Y.L., Lau,Y.M., Law,S.L., Law,T.W.,
            Li,M.L.Y., Tse,C.H., Wong,C.H., Yiu,W.H., Lee,C.Y., Chan,A.K.C.,
            Chiu,R.W.K., Ng,E.K.O., Tong,Y.K., Chan,P.K.S., Au-Yeung,C.,
            Cheung,J.K.L., Chu,I., Hung,E.C.W. and Waye,M.M.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2003) Department of Biochemistry, Chinese
            University of Hong Kong, MMW Bldg. Rm 608, Shatin, NT SAR, China
COMMENT     On Apr 21, 2003 this sequence version replaced AY278554.1.
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3 minutes ago, niman said:

Tonight at 11 PM ET

Dr. Henry Niman, PhD

China Confirms First Death
From SARS Like Virus,
6 In Critical
This Is Far Worse Than
The Beginning Of The SARS Outbreak


Wuhan Department of Health Reports 1st
Confirmed Death From Coronavirus


Wuhon Coronavirus Sequence At Genbank
WH-Human_1|China|2019-Dec

https://www.renseradio.com/listenlive.php

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2 hours ago, niman said:

Tonight at 11 PM ET

Dr. Henry Niman, PhD

China Confirms First Death
From SARS Like Virus,
6 In Critical
This Is Far Worse Than
The Beginning Of The SARS Outbreak


Wuhan Department of Health Reports 1st
Confirmed Death From Coronavirus


Wuhon Coronavirus Sequence At Genbank
WH-Human_1|China|2019-Dec

http://mediaarchives.gsradio.net/rense/special/rense_011020_hr3.mp3

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Wuhan pneumonia: new strain ‘bears close similarity to Sars’ as Hong Kong health minister assures public city is prepared

  • Secretary for Food and Health Sophia Chan says Hong Kong has plenty of beds and protective gear, but appeals to retailers not to jack up prices of masks
Victor Ting
 
Victor Ting

 

 
17
 
 
Sophia Chan, secretary for food and health in Hong Kong. Photo: May TseSophia Chan, secretary for food and health in Hong Kong. Photo: May Tse
Sophia Chan, secretary for food and health in Hong Kong. Photo: May Tse
 

A new strain of pneumonia that claimed its first fatality in mainland China on Saturday has been revealed as a Sars-like coronavirus, with close to 80 per cent similarity to the widespread global epidemic that broke out in 2003, according to an unofficial international analysis.

Hong Kong officials confirmed the findings meant all people tested for infection locally so far did not carry the virus.

A group of international experts from institutions including the Shanghai Public Health Clinical Centre and Centre of Public Health, Central Hospital of Wuhan, and the University of Sydney analysed the coronavirus genome from a respiratory disease case from the Wuhan outbreak and released the results on Friday.

They showed a group-2B coronavirus, with close to 80 per cent similarity to the severe acute respiratory syndrome genome. Its primary source was likely to be bats, like Sars, and it attacked humans through a cell receptor known as ACE2.

Patients at the accident and emergency unit of Queen Elizabeth Hospital in Yau Ma Tei. Photo: Edmond So
Patients at the accident and emergency unit of Queen Elizabeth Hospital in Yau Ma Tei. Photo: Edmond So

In a joint press conference with health officials, University of Hong Kong professor and microbiologist Yuen Kwok-yung said diagnosis tests of suspected cases in the city had covered the new coronavirus genome and no patients had tested positive for the disease.

 
 

He said more clinical research by mainland medical professionals was needed to determine the coronavirus’s potency, as the genome sequence could change rapidly after transmission.

Dr Wong Ka-hing, controller at the government’s Centre for Health Protection, said: “The prevention strategy of the past 10 days is in the right direction. It will continue ... medical professionals and residents should stay vigilant and we will monitor the situation.”

https://www.scmp.com/news/hong-kong/health-environment/article/3045659/wuhan-pneumonia-hong-kong-health-minister-assures

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Five human Wuhan sequences have been released at GISAID

Newly discovered betacoronavirus, Wuhan 2019-2020

A previously unknown betacoronavirus was detected in patients during an outbreak of respiratory illnesses, including atypical pneumonia, that started mid-December 2019 in the city of Wuhan, the capital of Central China’s Hubei Province.

The newly discovered coronavirus is similar to some of the betacoronaviruses detected in bats, but it is distinct from SARS-CoV and MERS-CoV.

The genome of the newly discovered CoV consists of a single, positive-stranded RNA that is approximately 30k nucleotides long. The overall genome organization of the newly discovered CoV is similar to that of other coronaviruses. The newly sequenced virus genome encodes the open reading frames (ORFs) common to all betacoronaviruses, including ORF1ab that encodes many enzymatic proteins, the spike-surface glycoprotein (S), the small envelope protein (E), the matrix protein (M), and the nucleocapsid protein (N), as well as several nonstructural proteins.

Virus name
 
Accession ID
 
Passage details/history
 
Collection date
 
Host
 
Originating lab
 
Submitting lab
 
Virus name Accession ID Passage details/history Collection date Host Originating lab Submitting lab
BetaCoV/Wuhan/IVDC-HB-01/2019
EPI_ISL_402119
Virus Isolate, Passage 1
2019-12-30
Human
National Institute for Viral Disease Control and Prevention, China CDC
National Institute for Viral Disease Control and Prevention, China CDC
BetaCoV/Wuhan/IVDC-HB-04/2020
EPI_ISL_402120
Original
2020-01-01
Human
National Institute for Viral Disease Control and Prevention, China CDC
National Institute for Viral Disease Control and Prevention, China CDC
BetaCoV/Wuhan/IVDC-HB-05/2019
EPI_ISL_402121
Original
2019-12-30
Human
National Institute for Viral Disease Control and Prevention, China CDC
National Institute for Viral Disease Control and Prevention, China CDC
BetaCoV/Wuhan/IPBCAMS-WH-01/2019
EPI_ISL_402123
Original
2019-12-24
Human
Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
BetaCoV/Wuhan/WIV04/2019
EPI_ISL_402124
Original
2019-12-30
Human
Wuhan Jinyintan Hospital
Wuhan 
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BetaCoV/Wuhan/IVDC-HB-01/2019|EPI_ISL_402119

Top 100 matches at Genbank

Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
26943 35321 95% 0.0 89.12% MG772933.1
22223 35261 94% 0.0 88.65% MG772934.1
15213 22559 88% 0.0 82.34% AY395003.1
15213 22594 88% 0.0 82.34% AY394996.1
15202 22531 88% 0.0 82.33% AY304488.1
15202 22529 88% 0.0 82.33% AY304486.1
15191 22548 88% 0.0 82.32% AY390556.1
15186 22483 88% 0.0 82.32% EU371564.1
15186 22271 87% 0.0 82.31% AY394985.1
15186 22572 88% 0.0 82.32% AY278554.2
15180 22548 88% 0.0 82.31% EU371559.1
15180 22507 88% 0.0 82.31% AY559093.1
15180 22561 88% 0.0 82.31% AY394994.1
15180 22520 88% 0.0 82.31% AY394986.1
15176 22618 91% 0.0 82.32% MK211376.1
15176 22534 91% 0.0 82.30% KY417146.1
15175 22417 88% 0.0 82.30% JX163927.1
15175 22424 88% 0.0 82.30% JX163926.1
15175 22417 88% 0.0 82.30% JX163923.1
15175 22529 88% 0.0 82.30% JQ316196.1
15175 22450 88% 0.0 82.30% FJ882963.1
15175 22568 88% 0.0 82.30% DQ898174.1
15175 22574 88% 0.0 82.30% AY864806.1
15175 22529 88% 0.0 82.30% AY714217.1
15175 22516 88% 0.0 82.30% AY559096.1
15175 22504 88% 0.0 82.30% AY559095.1
15175 22502 88% 0.0 82.30% AY559086.1
15175 22504 88% 0.0 82.30% AY559085.1
15175 22526 88% 0.0 82.30% AY559084.1
15175 22513 88% 0.0 82.30% AY559083.1
15175 22502 88% 0.0 82.30% AY559082.1
15175 22563 88% 0.0 82.30% AY274119.3
15175 22574 88% 0.0 82.30% AY323977.2
15175 22539 88% 0.0 82.30% AY291451.1
15175 22533 88% 0.0 82.30% AY502928.1
15175 22526 88% 0.0 82.30% AY502926.1
15175 22539 88% 0.0 82.30% AY502923.1
15175 22505 88% 0.0 82.30% AY394999.1
15175 22555 88% 0.0 82.30% AY394998.1
15175 22550 88% 0.0 82.30% AY394995.1
15175 22555 88% 0.0 82.31% AY394993.1
15175 22561 88% 0.0 82.31% AY394992.1
15175 22561 88% 0.0 82.30% AY394991.1
15175 22542 88% 0.0 82.30% AY394987.1
15175 22529 88% 0.0 82.30% AY394983.1
15175 22456 88% 0.0 82.30% AY394978.1
15175 22552 88% 0.0 82.30% AY357075.1
15175 22555 88% 0.0 82.30% AY282752.2
15175 22522 88% 0.0 82.30% AY427439.1
15175 22528 88% 0.0 82.30% AY283796.1
15175 22535 88% 0.0 82.30% AP006561.1
15173 22415 88% 0.0 82.30% JX163925.1
15171 22424 88% 0.0 82.30% JX163928.1
15169 22420 88% 0.0 82.30% JX163924.1
15169 22415 88% 0.0 82.30% GU553363.1
15169 22504 88% 0.0 82.30% EU371563.1
15169 22509 88% 0.0 82.30% EU371561.1
15169 22509 88% 0.0 82.30% EU371560.1
15169 22568 88% 0.0 82.30% AY864805.1
15169 22535 88% 0.0 82.30% AY278741.1
15169 22518 88% 0.0 82.29% AY559087.1
15169 22555 88% 0.0 82.30% AY394989.1
15169 22546 88% 0.0 82.30% AY485278.1
15167 22526 88% 0.0 82.29% AY502927.1
15165 22406 88% 0.0 82.29% GU553365.1
15163 21673 85% 0.0 82.29% KJ473816.1
15158 22498 88% 0.0 82.29% EU371562.1
15149 22403 88% 0.0 82.29% MK211377.1
15134 22372 87% 0.0 82.26% KY417145.1
15117 22368 89% 0.0 82.26% MK211375.1
15084 16332 64% 0.0 82.35% KF294455.1
15043 21834 86% 0.0 82.18% JX993988.1
14970 22339 87% 0.0 82.20% KJ473814.1
14916 22163 87% 0.0 82.16% DQ648857.1
14892 21819 88% 0.0 82.00% JX993987.1
14759 23767 91% 0.0 81.89% KF294457.1
14731 21836 87% 0.0 82.02% MK211374.1
14722 21360 87% 0.0 81.82% KJ473813.1
14683 21261 87% 0.0 81.79% KJ473812.1
14683 21067 86% 0.0 81.79% KJ473811.1
14683 21958 89% 0.0 81.82% GQ153542.1
14678 21996 88% 0.0 81.82% GQ153543.1
14628 21416 87% 0.0 81.74% KY770860.1
14556 21386 87% 0.0 81.66% DQ648856.1
14556 21394 87% 0.0 81.66% DQ412042.1
14550 21830 89% 0.0 81.68% GQ153547.1
14539 15829 66% 0.0 81.66% KF294456.1
14517 21875 89% 0.0 81.65% FJ211859.1
14512 21810 88% 0.0 81.64% DQ084199.1
14506 21791 89% 0.0 81.63% GQ153540.1
14506 21797 89% 0.0 81.63% GQ153539.1
14501 21780 89% 0.0 81.63% GQ153546.1
14501 21858 89% 0.0 81.63% DQ022305.2
14501 21843 89% 0.0 81.63% DQ084200.1
14495 21769 89% 0.0 81.63% GQ153548.1
14495 21797 89% 0.0 81.62% GQ153541.1
14484 21758 89% 0.0 81.61% GQ153545.1
14484 21758 89% 0.0 81.61% GQ153544.1
13501 20280 79% 0.0 82.94% KU182964.1
13452 20206 79% 0.0 82.88% KY938558.1

 

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BetaCoV/Wuhan/IVDC-HB-04/2020|EPI_ISL_402120

Top 100 matches at Genbank

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
23767 35111 95% 0.0 89.90% MG772933.1
19149 35057 94% 0.0 89.42% MG772934.1
12373 22342 88% 0.0 82.10% AY395003.1
12373 22374 88% 0.0 82.10% AY394996.1
12362 22368 88% 0.0 82.08% AY304488.1
12362 22348 88% 0.0 82.08% AY304486.1
12357 22346 88% 0.0 82.08% AY390556.1
12357 22054 88% 0.0 82.08% AY394985.1
12357 22351 88% 0.0 82.08% AY278554.2
12351 22340 88% 0.0 82.07% AY394994.1
12351 22303 88% 0.0 82.07% AY394986.1
12345 22481 91% 0.0 82.06% MK211376.1
12345 22281 88% 0.0 82.06% EU371564.1
12345 22346 88% 0.0 82.06% EU371559.1
12345 22340 88% 0.0 82.06% AY864806.1
12345 22335 88% 0.0 82.06% AY864805.1
12345 22324 88% 0.0 82.06% AY559093.1
12345 22324 88% 0.0 82.06% AY559084.1
12345 22322 88% 0.0 82.06% AY559082.1
12345 22329 88% 0.0 82.06% AY394995.1
12340 22077 88% 0.0 82.06% MK062183.1
12340 22180 88% 0.0 82.06% MK062181.1
12340 22324 88% 0.0 82.06% MK062179.1
12340 22314 88% 0.0 82.06% JX163927.1
12340 22322 88% 0.0 82.06% JX163926.1
12340 22314 88% 0.0 82.06% JX163923.1
12340 22335 88% 0.0 82.06% JQ316196.1
12340 22318 88% 0.0 82.06% FJ882963.1
12340 22335 88% 0.0 82.06% DQ898174.1
12340 22340 88% 0.0 82.06% AY278741.1
12340 22335 88% 0.0 82.06% AY714217.1
12340 22335 88% 0.0 82.06% AY559096.1
12340 22318 88% 0.0 82.06% AY559095.1
12340 22322 88% 0.0 82.06% AY559086.1
12340 22318 88% 0.0 82.06% AY559085.1
12340 22320 88% 0.0 82.06% AY559083.1
12340 22340 88% 0.0 82.06% AY394991.1
12340 22326 88% 0.0 82.06% AY394987.1
12338 22313 88% 0.0 82.05% JX163925.1
12338 22327 88% 0.0 82.05% AY559087.1
12336 22322 88% 0.0 82.05% JX163928.1
12336 22305 88% 0.0 82.05% AY559092.1
12336 22309 88% 0.0 82.05% AY559088.1
12334 22318 88% 0.0 82.05% JX163924.1
12331 22292 88% 0.0 82.05% FJ882938.1
12329 19557 81% 0.0 82.05% KY417152.1
12329 22302 88% 0.0 82.05% EU371563.1
12329 22296 88% 0.0 82.05% EU371562.1
12329 22307 88% 0.0 82.05% EU371561.1
12329 22307 88% 0.0 82.05% EU371560.1
12323 22263 89% 0.0 82.04% KY417148.1
12323 22302 91% 0.0 82.04% KY417146.1
12323 22276 88% 0.0 82.04% FJ882949.1
12323 22274 88% 0.0 82.04% FJ882947.1
12323 22274 88% 0.0 82.04% FJ882936.1
12323 22276 88% 0.0 82.04% FJ882935.1
12323 22274 88% 0.0 82.04% FJ882934.1
12323 22276 88% 0.0 82.04% FJ882933.1
12323 22268 88% 0.0 82.04% FJ882932.1
12323 22285 88% 0.0 82.04% FJ882927.1
12321 22283 88% 0.0 82.02% AY595412.1
12320 19474 78% 0.0 82.03% KY417142.1
12318 22270 88% 0.0 82.03% FJ882937.1
12314 19573 80% 0.0 82.02% KY417151.1
12307 19474 79% 0.0 82.02% MK211377.1
12307 22141 87% 0.0 82.02% KY417145.1
12290 22355 90% 0.0 82.00% KT444582.1
12285 21363 86% 0.0 81.99% KJ473815.1
12273 21602 85% 0.0 81.98% KJ473816.1
12272 16252 64% 0.0 82.12% KF294455.1
12246 19355 76% 0.0 81.94% KY770859.1
12224 21759 87% 0.0 81.91% JX993988.1
12205 21957 87% 0.0 82.03% DQ648857.1
12170 22141 87% 0.0 81.98% KJ473814.1
12096 21748 88% 0.0 81.75% JX993987.1
12091 18581 77% 0.0 81.72% KJ473813.1
12063 18494 77% 0.0 81.69% KJ473812.1
12046 20989 87% 0.0 81.67% KJ473811.1
12030 21763 89% 0.0 81.68% GQ153542.1
12024 21801 88% 0.0 81.68% GQ153543.1
12002 21693 87% 0.0 81.84% MK211374.1
11996 21164 87% 0.0 81.61% DQ648856.1
11991 18646 77% 0.0 81.61% KY770860.1
11984 21171 87% 0.0 81.60% DQ412042.1
11978 23562 91% 0.0 81.61% KF294457.1
11912 13189 56% 0.0 81.51% KF294456.1
11891 21630 89% 0.0 81.51% GQ153547.1
11847 21591 89% 0.0 81.45% GQ153540.1
11847 21625 89% 0.0 81.45% DQ084199.1
11841 21569 89% 0.0 81.45% GQ153548.1
11841 21597 89% 0.0 81.44% GQ153539.1
11836 21580 89% 0.0 81.44% GQ153546.1
11830 21597 89% 0.0 81.43% GQ153541.1
11830 21636 89% 0.0 81.43% FJ211859.1
11825 21619 89% 0.0 81.42% DQ022305.2
11825 21619 89% 0.0 81.42% DQ084200.1
11819 21558 89% 0.0 81.42% GQ153545.1
11819 21558 89% 0.0 81.42% GQ153544.1
10866 20060 79% 0.0 83.10% KU182964.1
10811 19960 79% 0.0 83.02% KY938558.1

 

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BetaCoV/Wuhan/IVDC-HB-05/2019|EPI_ISL_402121

Top 100 matches at Genbank

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
26897 35062 95% 0.0 89.09% MG772933.1
22207 34997 94% 0.0 88.64% MG772934.1
15175 22256 88% 0.0 82.31% AY395003.1
15175 22288 88% 0.0 82.31% AY394996.1
15163 22282 88% 0.0 82.29% AY304488.1
15163 22267 88% 0.0 82.29% AY304486.1
15152 22260 88% 0.0 82.28% AY390556.1
15147 22195 88% 0.0 82.28% EU371564.1
15147 21968 88% 0.0 82.28% AY394985.1
15147 22265 88% 0.0 82.28% AY278554.2
15141 22260 88% 0.0 82.27% EU371559.1
15141 22238 88% 0.0 82.27% AY559093.1
15141 22254 88% 0.0 82.27% AY394994.1
15141 22217 88% 0.0 82.27% AY394986.1
15136 22228 88% 0.0 82.27% JX163927.1
15136 22236 88% 0.0 82.27% JX163926.1
15136 22228 88% 0.0 82.27% JX163923.1
15136 22249 88% 0.0 82.27% JQ316196.1
15136 22232 88% 0.0 82.27% FJ882963.1
15136 22249 88% 0.0 82.27% DQ898174.1
15136 22254 88% 0.0 82.27% AY864806.1
15136 22249 88% 0.0 82.27% AY714217.1
15136 22249 88% 0.0 82.27% AY559096.1
15136 22232 88% 0.0 82.27% AY559095.1
15136 22236 88% 0.0 82.27% AY559086.1
15136 22232 88% 0.0 82.27% AY559085.1
15136 22238 88% 0.0 82.27% AY559084.1
15136 22234 88% 0.0 82.27% AY559083.1
15136 22236 88% 0.0 82.27% AY559082.1
15136 22243 88% 0.0 82.27% AY274119.3
15136 22254 88% 0.0 82.27% AY323977.2
15136 22254 88% 0.0 82.27% AY291451.1
15136 22249 88% 0.0 82.27% AY502928.1
15136 22241 88% 0.0 82.27% AY502926.1
15136 22254 88% 0.0 82.27% AY502923.1
15136 22199 88% 0.0 82.27% AY394999.1
15136 22249 88% 0.0 82.27% AY394998.1
15136 22243 88% 0.0 82.26% AY394995.1
15136 22249 88% 0.0 82.27% AY394993.1
15136 22254 88% 0.0 82.27% AY394992.1
15136 22254 88% 0.0 82.27% AY394991.1
15136 22239 88% 0.0 82.27% AY394987.1
15136 22227 88% 0.0 82.27% AY394983.1
15136 22153 88% 0.0 82.27% AY394978.1
15136 22243 88% 0.0 82.27% AY357075.1
15136 22249 88% 0.0 82.27% AY282752.2
15136 22254 88% 0.0 82.27% AY427439.1
15136 22260 88% 0.0 82.27% AY283796.1
15136 22254 88% 0.0 82.27% AP006561.1
15134 22227 88% 0.0 82.26% JX163925.1
15132 22203 91% 0.0 82.26% KY417146.1
15132 22236 88% 0.0 82.26% JX163928.1
15130 22232 88% 0.0 82.26% JX163924.1
15130 22227 88% 0.0 82.26% GU553363.1
15130 22215 88% 0.0 82.26% EU371563.1
15130 22221 88% 0.0 82.26% EU371561.1
15130 22221 88% 0.0 82.26% EU371560.1
15130 22249 88% 0.0 82.26% AY864805.1
15130 22254 88% 0.0 82.26% AY278741.1
15130 22241 88% 0.0 82.26% AY559087.1
15130 22249 88% 0.0 82.26% AY394989.1
15130 22238 88% 0.0 82.26% AY485278.1
15128 22241 88% 0.0 82.26% AY502927.1
15127 22217 88% 0.0 82.26% GU553365.1
15121 22367 91% 0.0 82.26% MK211376.1
15119 21517 85% 0.0 82.25% KJ473816.1
15119 22210 88% 0.0 82.25% EU371562.1
15095 22046 86% 0.0 82.22% KY417145.1
15093 22137 89% 0.0 82.24% MK211377.1
15062 22102 89% 0.0 82.20% MK211375.1
15062 16287 64% 0.0 82.33% KF294455.1
15016 21695 87% 0.0 82.15% JX993988.1
14931 22051 87% 0.0 82.16% KJ473814.1
14877 21860 87% 0.0 82.12% DQ648857.1
14864 21666 88% 0.0 81.98% JX993987.1
14731 23490 91% 0.0 81.86% KF294457.1
14698 21609 87% 0.0 81.98% MK211374.1
14689 21708 89% 0.0 81.83% GQ153542.1
14683 21072 87% 0.0 81.79% KJ473813.1
14683 21756 88% 0.0 81.82% GQ153543.1
14645 20975 87% 0.0 81.75% KJ473812.1
14633 20891 87% 0.0 81.74% KJ473811.1
14595 21148 87% 0.0 81.71% KY770860.1
14534 21553 89% 0.0 81.67% GQ153547.1
14517 21067 87% 0.0 81.63% DQ648856.1
14517 21063 87% 0.0 81.63% DQ412042.1
14501 15785 66% 0.0 81.62% KF294456.1
14501 21559 89% 0.0 81.63% FJ211859.1
14495 21548 89% 0.0 81.62% DQ084199.1
14489 21514 89% 0.0 81.62% GQ153540.1
14489 21520 89% 0.0 81.62% GQ153539.1
14484 21503 89% 0.0 81.62% GQ153546.1
14484 21542 89% 0.0 81.61% DQ022305.2
14484 21542 89% 0.0 81.61% DQ084200.1
14478 21492 89% 0.0 81.61% GQ153548.1
14478 21520 89% 0.0 81.61% GQ153541.1
14467 21481 89% 0.0 81.60% GQ153545.1
14467 21481 89% 0.0 81.60% GQ153544.1
13468 19977 79% 0.0 82.91% KU182964.1
13418 19878 79% 0.0 82.85% KY938558.1
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BetaCoV/Wuhan/IPBCAMS-WH-01/2019|EPI_ISL_402123

Top 100 matches at Genbank

Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
26927 35319 95% 0.0 89.10% MG772933.1
22207 35259 94% 0.0 88.64% MG772934.1
15202 22553 88% 0.0 82.33% AY395003.1
15202 22589 88% 0.0 82.33% AY394996.1
15191 22520 88% 0.0 82.32% AY304488.1
15191 22518 88% 0.0 82.32% AY304486.1
15180 22537 88% 0.0 82.31% AY390556.1
15175 22472 88% 0.0 82.30% EU371564.1
15175 22265 87% 0.0 82.30% AY394985.1
15175 22566 88% 0.0 82.30% AY278554.2
15169 22537 88% 0.0 82.30% EU371559.1
15169 22496 88% 0.0 82.30% AY559093.1
15169 22555 88% 0.0 82.30% AY394994.1
15169 22515 88% 0.0 82.30% AY394986.1
15165 22607 91% 0.0 82.31% MK211376.1
15165 22523 91% 0.0 82.29% KY417146.1
15163 22406 88% 0.0 82.29% JX163927.1
15163 22413 88% 0.0 82.29% JX163926.1
15163 22406 88% 0.0 82.29% JX163923.1
15163 22518 88% 0.0 82.29% JQ316196.1
15163 22439 88% 0.0 82.29% FJ882963.1
15163 22563 88% 0.0 82.29% DQ898174.1
15163 22568 88% 0.0 82.29% AY864806.1
15163 22518 88% 0.0 82.29% AY714217.1
15163 22505 88% 0.0 82.29% AY559096.1
15163 22492 88% 0.0 82.29% AY559095.1
15163 22491 88% 0.0 82.29% AY559086.1
15163 22492 88% 0.0 82.29% AY559085.1
15163 22515 88% 0.0 82.29% AY559084.1
15163 22502 88% 0.0 82.29% AY559083.1
15163 22491 88% 0.0 82.29% AY559082.1
15163 22557 88% 0.0 82.29% AY274119.3
15163 22568 88% 0.0 82.29% AY323977.2
15163 22528 88% 0.0 82.29% AY291451.1
15163 22522 88% 0.0 82.29% AY502928.1
15163 22515 88% 0.0 82.29% AY502926.1
15163 22528 88% 0.0 82.29% AY502923.1
15163 22500 88% 0.0 82.29% AY394999.1
15163 22550 88% 0.0 82.29% AY394998.1
15163 22544 88% 0.0 82.29% AY394995.1
15163 22550 88% 0.0 82.29% AY394993.1
15163 22555 88% 0.0 82.29% AY394992.1
15163 22555 88% 0.0 82.29% AY394991.1
15163 22537 88% 0.0 82.29% AY394987.1
15163 22524 88% 0.0 82.29% AY394983.1
15163 22450 88% 0.0 82.29% AY394978.1
15163 22552 88% 0.0 82.29% AY357075.1
15163 22550 88% 0.0 82.29% AY282752.2
15163 22511 88% 0.0 82.29% AY427439.1
15163 22516 88% 0.0 82.29% AY283796.1
15163 22524 88% 0.0 82.29% AP006561.1
15162 22404 88% 0.0 82.29% JX163925.1
15160 22413 88% 0.0 82.29% JX163928.1
15158 22409 88% 0.0 82.29% JX163924.1
15158 22404 88% 0.0 82.29% GU553363.1
15158 22492 88% 0.0 82.29% EU371563.1
15158 22498 88% 0.0 82.29% EU371561.1
15158 22498 88% 0.0 82.29% EU371560.1
15158 22563 88% 0.0 82.29% AY864805.1
15158 22524 88% 0.0 82.29% AY278741.1
15158 22507 88% 0.0 82.28% AY559087.1
15158 22550 88% 0.0 82.29% AY394989.1
15158 22535 88% 0.0 82.29% AY485278.1
15156 22515 88% 0.0 82.28% AY502927.1
15154 22395 88% 0.0 82.28% GU553365.1
15152 21661 85% 0.0 82.28% KJ473816.1
15147 22487 88% 0.0 82.28% EU371562.1
15138 22392 88% 0.0 82.28% MK211377.1
15123 22361 86% 0.0 82.25% KY417145.1
15106 22357 88% 0.0 82.25% MK211375.1
15073 16321 64% 0.0 82.34% KF294455.1
15032 21823 86% 0.0 82.17% JX993988.1
14958 22328 87% 0.0 82.19% KJ473814.1
14905 22152 87% 0.0 82.15% DQ648857.1
14881 21808 88% 0.0 81.99% JX993987.1
14748 23756 91% 0.0 81.88% KF294457.1
14720 21825 87% 0.0 82.00% MK211374.1
14711 21349 87% 0.0 81.81% KJ473813.1
14672 21250 86% 0.0 81.78% KJ473812.1
14672 21056 86% 0.0 81.78% KJ473811.1
14672 21947 88% 0.0 81.81% GQ153542.1
14667 21985 88% 0.0 81.80% GQ153543.1
14617 21405 87% 0.0 81.73% KY770860.1
14545 21375 87% 0.0 81.65% DQ648856.1
14545 21383 87% 0.0 81.65% DQ412042.1
14539 21819 88% 0.0 81.67% GQ153547.1
14528 15818 66% 0.0 81.65% KF294456.1
14506 21867 89% 0.0 81.63% FJ211859.1
14501 21799 88% 0.0 81.63% DQ084199.1
14495 21780 88% 0.0 81.62% GQ153540.1
14495 21786 88% 0.0 81.62% GQ153539.1
14489 21769 88% 0.0 81.62% GQ153546.1
14489 21852 89% 0.0 81.62% DQ022305.2
14489 21838 89% 0.0 81.62% DQ084200.1
14484 21758 88% 0.0 81.61% GQ153548.1
14484 21786 88% 0.0 81.61% GQ153541.1
14473 21747 88% 0.0 81.60% GQ153545.1
14473 21747 88% 0.0 81.60% GQ153544.1
13490 20269 79% 0.0 82.93% KU182964.1
13441 20195 79% 0.0 82.87% KY938558.1

 

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BetaCoV/Wuhan/WIV04/2019|EPI_ISL_402124

Top 100 matches

Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
26943 35321 95% 0.0 89.12% MG772933.1
22223 35261 94% 0.0 88.65% MG772934.1
15213 22559 88% 0.0 82.34% AY395003.1
15213 22594 88% 0.0 82.34% AY394996.1
15202 22531 88% 0.0 82.33% AY304488.1
15202 22529 88% 0.0 82.33% AY304486.1
15191 22548 88% 0.0 82.32% AY390556.1
15186 22483 88% 0.0 82.32% EU371564.1
15186 22271 87% 0.0 82.31% AY394985.1
15186 22572 88% 0.0 82.32% AY278554.2
15180 22548 88% 0.0 82.31% EU371559.1
15180 22507 88% 0.0 82.31% AY559093.1
15180 22561 88% 0.0 82.31% AY394994.1
15180 22520 88% 0.0 82.31% AY394986.1
15176 22618 91% 0.0 82.32% MK211376.1
15176 22534 91% 0.0 82.30% KY417146.1
15175 22417 88% 0.0 82.30% JX163927.1
15175 22424 88% 0.0 82.30% JX163926.1
15175 22417 88% 0.0 82.30% JX163923.1
15175 22529 88% 0.0 82.30% JQ316196.1
15175 22450 88% 0.0 82.30% FJ882963.1
15175 22568 88% 0.0 82.30% DQ898174.1
15175 22574 88% 0.0 82.30% AY864806.1
15175 22529 88% 0.0 82.30% AY714217.1
15175 22516 88% 0.0 82.30% AY559096.1
15175 22504 88% 0.0 82.30% AY559095.1
15175 22502 88% 0.0 82.30% AY559086.1
15175 22504 88% 0.0 82.30% AY559085.1
15175 22526 88% 0.0 82.30% AY559084.1
15175 22513 88% 0.0 82.30% AY559083.1
15175 22502 88% 0.0 82.30% AY559082.1
15175 22563 88% 0.0 82.30% AY274119.3
15175 22574 88% 0.0 82.30% AY323977.2
15175 22539 88% 0.0 82.30% AY291451.1
15175 22533 88% 0.0 82.30% AY502928.1
15175 22526 88% 0.0 82.30% AY502926.1
15175 22539 88% 0.0 82.30% AY502923.1
15175 22505 88% 0.0 82.30% AY394999.1
15175 22555 88% 0.0 82.30% AY394998.1
15175 22550 88% 0.0 82.30% AY394995.1
15175 22555 88% 0.0 82.31% AY394993.1
15175 22561 88% 0.0 82.31% AY394992.1
15175 22561 88% 0.0 82.30% AY394991.1
15175 22542 88% 0.0 82.30% AY394987.1
15175 22529 88% 0.0 82.30% AY394983.1
15175 22456 88% 0.0 82.30% AY394978.1
15175 22552 88% 0.0 82.30% AY357075.1
15175 22555 88% 0.0 82.30% AY282752.2
15175 22522 88% 0.0 82.30% AY427439.1
15175 22528 88% 0.0 82.30% AY283796.1
15175 22535 88% 0.0 82.30% AP006561.1
15173 22415 88% 0.0 82.30% JX163925.1
15171 22424 88% 0.0 82.30% JX163928.1
15169 22420 88% 0.0 82.30% JX163924.1
15169 22415 88% 0.0 82.30% GU553363.1
15169 22504 88% 0.0 82.30% EU371563.1
15169 22509 88% 0.0 82.30% EU371561.1
15169 22509 88% 0.0 82.30% EU371560.1
15169 22568 88% 0.0 82.30% AY864805.1
15169 22535 88% 0.0 82.30% AY278741.1
15169 22518 88% 0.0 82.29% AY559087.1
15169 22555 88% 0.0 82.30% AY394989.1
15169 22546 88% 0.0 82.30% AY485278.1
15167 22526 88% 0.0 82.29% AY502927.1
15165 22406 88% 0.0 82.29% GU553365.1
15163 21673 85% 0.0 82.29% KJ473816.1
15158 22498 88% 0.0 82.29% EU371562.1
15149 22403 88% 0.0 82.29% MK211377.1
15134 22372 87% 0.0 82.26% KY417145.1
15117 22368 89% 0.0 82.26% MK211375.1
15084 16332 64% 0.0 82.35% KF294455.1
15043 21834 86% 0.0 82.18% JX993988.1
14970 22339 87% 0.0 82.20% KJ473814.1
14916 22163 87% 0.0 82.16% DQ648857.1
14892 21819 88% 0.0 82.00% JX993987.1
14759 23767 91% 0.0 81.89% KF294457.1
14731 21836 87% 0.0 82.02% MK211374.1
14722 21360 87% 0.0 81.82% KJ473813.1
14683 21261 87% 0.0 81.79% KJ473812.1
14683 21067 86% 0.0 81.79% KJ473811.1
14683 21958 89% 0.0 81.82% GQ153542.1
14678 21996 88% 0.0 81.82% GQ153543.1
14628 21416 87% 0.0 81.74% KY770860.1
14556 21386 87% 0.0 81.66% DQ648856.1
14556 21394 87% 0.0 81.66% DQ412042.1
14550 21830 89% 0.0 81.68% GQ153547.1
14539 15829 66% 0.0 81.66% KF294456.1
14517 21875 89% 0.0 81.65% FJ211859.1
14512 21810 88% 0.0 81.64% DQ084199.1
14506 21791 89% 0.0 81.63% GQ153540.1
14506 21797 89% 0.0 81.63% GQ153539.1
14501 21780 89% 0.0 81.63% GQ153546.1
14501 21858 89% 0.0 81.63% DQ022305.2
14501 21843 89% 0.0 81.63% DQ084200.1
14495 21769 89% 0.0 81.63% GQ153548.1
14495 21797 89% 0.0 81.62% GQ153541.1
14484 21758 89% 0.0 81.61% GQ153545.1
14484 21758 89% 0.0 81.61% GQ153544.1
13501 20280 79% 0.0 82.94% KU182964.1
13452 20206 79% 0.0 82.88% KY938558.1
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Wuhan seafood market pneumonia virus isolate Wuhan-Hu-1, complete genome

GenBank: MN908947.1

FASTA Graphics

LOCUS       MN908947               30473 bp ss-RNA     linear   VRL 12-JAN-2020
DEFINITION  Wuhan seafood market pneumonia virus isolate Wuhan-Hu-1, complete
            genome.
ACCESSION   MN908947
VERSION     MN908947.1
KEYWORDS    .
SOURCE      Wuhan seafood market pneumonia virus
  ORGANISM  Wuhan seafood market pneumonia virus
            Viruses; Riboviria; Nidovirales; Cornidovirineae; Coronaviridae;
            Orthocoronavirinae; Betacoronavirus; unclassified Betacoronavirus.
REFERENCE   1  (bases 1 to 30473)
  AUTHORS   Zhang,Y.-Z., Wu,F., Chen,Y.-M., Pei,Y.-Y., Xu,L., Wang,W., Zhao,S.,
            Yu,B., Hu,Y., Tao,Z.-W., Song,Z.-G., Tian,J.-H., Zhang,Y.-L.,
            Liu,Y., Zheng,J.-J., Dai,F.-H., Wang,Q.-M., She,J.-L. and Zhu,T.-Y.
  TITLE     A novel coronavirus associated with a respiratory disease in Wuhan
            of Hubei province, China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 30473)
  AUTHORS   Zhang,Y.-Z., Wu,F., Chen,Y.-M., Pei,Y.-Y., Xu,L., Wang,W., Zhao,S.,
            Yu,B., Hu,Y., Tao,Z.-W., Song,Z.-G., Tian,J.-H., Zhang,Y.-L.,
            Liu,Y., Zheng,J.-J., Dai,F.-H., Wang,Q.-M., She,J.-L. and Zhu,T.-Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2020) Department of Zoonoses, National Institute
            of Communicable Disease Control and Prevention, Chinese Center for
            Disease Control and Prevention, Changping Liuzi 5, Beijing 102206,
            China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: Megahit v. V1.1.3
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..30473
                     /organism="Wuhan seafood market pneumonia virus"
                     /mol_type="genomic RNA"
                     /isolate="Wuhan-Hu-1"
                     /host="Homo sapiens"
                     /db_xref="taxon:2697049"
                     /country="China"
                     /collection_date="Dec-2019"
     5'UTR           1..281
     gene            282..21571
                     /gene="orf1ab"
     CDS             join(282..13484,13484..21571)
                     /gene="orf1ab"
                     /ribosomal_slippage
                     /note="pp1ab; translated by -1 ribosomal frameshift"
                     /codon_start=1
                     /product="ORF1ab polyprotein"
                     /protein_id="QHD43415.1"
                     /translation="MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQ
                     HLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGE
                     TLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQEN
                     WNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQ
                     LDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFP
                     LNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTG
                     DFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHSLAEYHNESG
                     LKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNL
                     LEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGN
                     FKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAA
                     ITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKL
                     KPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLV
                     NKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEII
                     FLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEK
                     YCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEK
                     CSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEF
                     KLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPE
                     EEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSG
                     YLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESD
                     DYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLA
                     PLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIA
                     EIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGN
                     LHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKAGGTTEMLAKALRKV
                     PTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREM
                     LAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLIN
                     TLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSS
                     KTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVIT
                     FDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPH
                     NSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIK
                     WADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELG
                     DVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQ
                     IPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSK
                     ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYY
                     KKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVT
                     FFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWST
                     KPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGD
                     IILKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNS
                     VPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRI
                     KASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTA
                     ALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLET
                     IQITISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWL
                     MWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVE
                     CTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRP
                     INPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPI
                     NVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVN
                     TFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVEC
                     LKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALI
                     WNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWL
                     KQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFA
                     NKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLP
                     RVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVA
                     YESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSG
                     RWVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCL
                     AYYFMRFRRAFGEYSHVVAFNTLLFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTN
                     DVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFE
                     EAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHL
                     AKALNDFSNSGSDVLYQPPQTSITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNG
                     LWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVL
                     KLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSC
                     GSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVN
                     VLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAV
                     LDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTIKGTHHW
                     LLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFL
                     LPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLSGFKLKDCVMYASAVVLLILMTAR
                     TVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLAR
                     GIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDYL
                     VSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVL
                     LSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKL
                     CEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAK
                     SEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALN
                     NIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDA
                     DSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTA
                     CTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
                     KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAK
                     AYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDH
                     PNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSA
                     DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKD
                     EDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQR
                     LTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYA
                     NLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVV
                     DSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQ
                     TYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRE
                     LGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQ
                     TVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDI
                     RQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQ
                     DALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAAT
                     RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
                     KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQ
                     AVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMM
                     ILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCS
                     QHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH
                     PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTV
                     LQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCD
                     VTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDW
                     TNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKP
                     RPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSH
                     TVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGK
                     SHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKF
                     KVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQ
                     LPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLK
                     AHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNA
                     VASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSD
                     RDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKT
                     EGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEG
                     CHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIP
                     LMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCL
                     CDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNA
                     HVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADK
                     FPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCL
                     FWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQ
                     LPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYN
                     MMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNT
                     VYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDY
                     KRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEG
                     SVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFK
                     PRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESP
                     FELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKV
                     TIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGD
                     SATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLP
                     TGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEG
                     FFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFL
                     IGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKE
                     GQINDMILSLLSKGRLIIRENNRVVISSDVLVNN"
     gene            21579..25400
                     /gene="S"
     CDS             21579..25400
                     /gene="S"
                     /note="structural protein"
                     /codon_start=1
                     /product="surface glycoprotein"
                     /protein_id="QHD43416.1"
                     /translation="MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFR
                     SSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIR
                     GWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY
                     SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQ
                     GFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFL
                     LKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITN
                     LCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCF
                     TNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYN
                     YLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPY
                     RVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFG
                     RDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAI
                     HADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPR
                     RARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTM
                     YICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFG
                     GFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFN
                     GLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQN
                     VLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGA
                     ISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMS
                     ECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAH
                     FPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD
                     SFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELG
                     KYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSE
                     PVLKGVKLHYT"
     gene            25409..26236
                     /gene="ORF3"
     CDS             25409..26236
                     /gene="ORF3"
                     /codon_start=1
                     /product="ORF3 protein"
                     /protein_id="QHD43417.1"
                     /translation="MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFG
                     WLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLE
                     APFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPY
                     NSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQ
                     LSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
     gene            26261..26488
                     /gene="E"
     CDS             26261..26488
                     /gene="E"
                     /note="structural protein; E protein"
                     /codon_start=1
                     /product="envelope protein"
                     /protein_id="QHD43418.1"
                     /translation="MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCC
                     NIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV"
     gene            26539..27207
                     /gene="M"
     CDS             26539..27207
                     /gene="M"
                     /note="structural protein"
                     /codon_start=1
                     /product="membrane glycoprotein"
                     /protein_id="QHD43419.1"
                     /translation="MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNR
                     FLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRL
                     FARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCD
                     IKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIA
                     LLVQ"
     gene            27218..27403
                     /gene="ORF6"
     CDS             27218..27403
                     /gene="ORF6"
                     /codon_start=1
                     /product="ORF6 protein"
                     /protein_id="QHD43420.1"
                     /translation="MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSL
                     TENKYSQLDEEQPMEID"
     gene            27410..27775
                     /gene="ORF7"
     CDS             27410..27775
                     /gene="ORF7"
                     /codon_start=1
                     /product="ORF7 protein"
                     /protein_id="QHD43421.1"
                     /translation="MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNS
                     PFHPLADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFL
                     IVAAIVFITLCFTLKRKTE"
     gene            27910..28275
                     /gene="ORF8"
     CDS             27910..28275
                     /gene="ORF8"
                     /codon_start=1
                     /product="ORF8 protein"
                     /protein_id="QHD43422.1"
                     /translation="MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSK
                     WYIRVGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRC
                     SFYEDFLEYHDVRVVLDFI"
     gene            28290..29549
                     /gene="N"
     CDS             28290..29549
                     /gene="N"
                     /note="structural protein"
                     /codon_start=1
                     /product="nucleocapsid phosphoprotein"
                     /protein_id="QHD43423.1"
                     /translation="MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQG
                     LPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK
                     DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQ
                     LPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAA
                     LALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGR
                     RGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYT
                     AAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEPKKDKKKKADETQALPQRQKKQQTV
                     TLLPAADLDDFSKQLQQSMSSADSTQA"
     3'UTR           29550..30473
ORIGIN      
        1 cggtgacgca tacaaaacat tcccaccata ccttcccagg taacaaacca accaactttc
       61 gatctcttgt agatctgttc tctaaacgaa ctttaaaatc tgtgtggctg tcactcggct
      121 gcatgcttag tgcactcacg cagtataatt aataactaat tactgtcgtt gacaggacac
      181 gagtaactcg tctatcttct gcaggctgct tacggtttcg tccgtgttgc agccgatcat
      241 cagcacatct aggtttcgtc cgggtgtgac cgaaaggtaa gatggagagc cttgtccctg
      301 gtttcaacga gaaaacacac gtccaactca gtttgcctgt tttacaggtt cgcgacgtgc
      361 tcgtacgtgg ctttggagac tccgtggagg aggtcttatc agaggcacgt caacatctta
      421 aagatggcac ttgtggctta gtagaagttg aaaaaggcgt tttgcctcaa cttgaacagc
      481 cctatgtgtt catcaaacgt tcggatgctc gaactgcacc tcatggtcat gttatggttg
      541 agctggtagc agaactcgaa ggcattcagt acggtcgtag tggtgagaca cttggtgtcc
      601 ttgtccctca tgtgggcgaa ataccagtgg cttaccgcaa ggttcttctt cgtaagaacg
      661 gtaataaagg agctggtggc catagttacg gcgccgatct aaagtcattt gacttaggcg
      721 acgagcttgg cactgatcct tatgaagatt ttcaagaaaa ctggaacact aaacatagca
      781 gtggtgttac ccgtgaactc atgcgtgagc ttaacggagg ggcatacact cgctatgtcg
      841 ataacaactt ctgtggccct gatggctacc ctcttgagtg cattaaagac cttctagcac
      901 gtgctggtaa agcttcatgc actttgtccg aacaactgga ctttattgac actaagaggg
      961 gtgtatactg ctgccgtgaa catgagcatg aaattgcttg gtacacggaa cgttctgaaa
     1021 agagctatga attgcagaca ccttttgaaa ttaaattggc aaagaaattt gacaccttca
     1081 atggggaatg tccaaatttt gtatttccct taaattccat aatcaagact attcaaccaa
     1141 gggttgaaaa gaaaaagctt gatggcttta tgggtagaat tcgatctgtc tatccagttg
     1201 cgtcaccaaa tgaatgcaac caaatgtgcc tttcaactct catgaagtgt gatcattgtg
     1261 gtgaaacttc atggcagacg ggcgattttg ttaaagccac ttgcgaattt tgtggcactg
     1321 agaatttgac taaagaaggt gccactactt gtggttactt accccaaaat gctgttgtta
     1381 aaatttattg tccagcatgt cacaattcag aagtaggacc tgagcatagt cttgccgaat
     1441 accataatga atctggcttg aaaaccattc ttcgtaaggg tggtcgcact attgcctttg
     1501 gaggctgtgt gttctcttat gttggttgcc ataacaagtg tgcctattgg gttccacgtg
     1561 ctagcgctaa cataggttgt aaccatacag gtgttgttgg agaaggttcc gaaggtctta
     1621 atgacaacct tcttgaaata ctccaaaaag agaaagtcaa catcaatatt gttggtgact
     1681 ttaaacttaa tgaagagatc gccattattt tggcatcttt ttctgcttcc acaagtgctt
     1741 ttgtggaaac tgtgaaaggt ttggattata aagcattcaa acaaattgtt gaatcctgtg
     1801 gtaattttaa agttacaaaa ggaaaagcta aaaaaggtgc ctggaatatt ggtgaacaga
     1861 aatcaatact gagtcctctt tatgcatttg catcagaggc tgctcgtgtt gtacgatcaa
     1921 ttttctcccg cactcttgaa actgctcaaa attctgtgcg tgttttacag aaggccgcta
     1981 taacaatact agatggaatt tcacagtatt cactgagact cattgatgct atgatgttca
     2041 catctgattt ggctactaac aatctagttg taatggccta cattacaggt ggtgttgttc
     2101 agttgacttc gcagtggcta actaacatct ttggcactgt ttatgaaaaa ctcaaacccg
     2161 tccttgattg gcttgaagag aagtttaagg aaggtgtaga gtttcttaga gacggttggg
     2221 aaattgttaa atttatctca acctgtgctt gtgaaattgt cggtggacaa attgtcacct
     2281 gtgcaaagga aattaaggag agtgttcaga cattctttaa gcttgtaaat aaatttttgg
     2341 ctttgtgtgc tgactctatc attattggtg gagctaaact taaagccttg aatttaggtg
     2401 aaacatttgt cacgcactca aagggattgt acagaaagtg tgttaaatcc agagaagaaa
     2461 ctggcctact catgcctcta aaagccccaa aagaaattat cttcttagag ggagaaacac
     2521 ttcccacaga agtgttaaca gaggaagttg tcttgaaaac tggtgattta caaccattag
     2581 aacaacctac tagtgaagct gttgaagctc cattggttgg tacaccagtt tgtattaacg
     2641 ggcttatgtt gctcgaaatc aaagacacag aaaagtactg tgcccttgca cctaatatga
     2701 tggtaacaaa caataccttc acactcaaag gcggtgcacc aacaaaggtt acttttggtg
     2761 atgacactgt gatagaagtg caaggttaca agagtgtgaa tatcactttt gaacttgatg
     2821 aaaggattga taaagtactt aatgagaagt gctctgccta tacagttgaa ctcggtacag
     2881 aagtaaatga gttcgcctgt gttgtggcag atgctgtcat aaaaactttg caaccagtat
     2941 ctgaattact tacaccactg ggcattgatt tagatgagtg gagtatggct acatactact
     3001 tatttgatga gtctggtgag tttaaattgg cttcacatat gtattgttct ttctaccctc
     3061 cagatgagga tgaagaagaa ggtgattgtg aagaagaaga gtttgagcca tcaactcaat
     3121 atgagtatgg tactgaagat gattaccaag gtaaaccttt ggaatttggt gccacttctg
     3181 ctgctcttca acctgaagaa gagcaagaag aagattggtt agatgatgat agtcaacaaa
     3241 ctgttggtca acaagacggc agtgaggaca atcagacaac tactattcaa acaattgttg
     3301 aggttcaacc tcaattagag atggaactta caccagttgt tcagactatt gaagtgaata
     3361 gttttagtgg ttatttaaaa cttactgaca atgtatacat taaaaatgca gacattgtgg
     3421 aagaagctaa aaaggtaaaa ccaacagtgg ttgttaatgc agccaatgtt taccttaaac
     3481 atggaggagg tgttgcagga gccttaaata aggctactaa caatgccatg caagttgaat
     3541 ctgatgatta catagctact aatggaccac ttaaagtggg tggtagttgt gttttaagcg
     3601 gacacaatct tgctaaacac tgtcttcatg ttgtcggccc aaatgttaac aaaggtgaag
     3661 acattcaact tcttaagagt gcttatgaaa attttaatca gcacgaagtt ctacttgcac
     3721 cattattatc agctggtatt tttggtgctg accctataca ttctttaaga gtttgtgtag
     3781 atactgttcg cacaaatgtc tacttagctg tctttgataa aaatctctat gacaaacttg
     3841 tttcaagctt tttggaaatg aagagtgaaa agcaagttga acaaaagatc gctgagattc
     3901 ctaaagagga agttaagcca tttataactg aaagtaaacc ttcagttgaa cagagaaaac
     3961 aagatgataa gaaaatcaaa gcttgtgttg aagaagttac aacaactctg gaagaaacta
     4021 agttcctcac agaaaacttg ttactttata ttgacattaa tggcaatctt catccagatt
     4081 ctgccactct tgttagtgac attgacatca ctttcttaaa gaaagatgct ccatatatag
     4141 tgggtgatgt tgttcaagag ggtgttttaa ctgctgtggt tatacctact aaaaaggctg
     4201 gtggcactac tgaaatgcta gcgaaagctt tgagaaaagt gccaacagac aattatataa
     4261 ccacttaccc gggtcagggt ttaaatggtt acactgtaga ggaggcaaag acagtgctta
     4321 aaaagtgtaa aagtgccttt tacattctac catctattat ctctaatgag aagcaagaaa
     4381 ttcttggaac tgtttcttgg aatttgcgag aaatgcttgc acatgcagaa gaaacacgca
     4441 aattaatgcc tgtctgtgtg gaaactaaag ccatagtttc aactatacag cgtaaatata
     4501 agggtattaa aatacaagag ggtgtggttg attatggtgc tagattttac ttttacacca
     4561 gtaaaacaac tgtagcgtca cttatcaaca cacttaacga tctaaatgaa actcttgtta
     4621 caatgccact tggctatgta acacatggct taaatttgga agaagctgct cggtatatga
     4681 gatctctcaa agtgccagct acagtttctg tttcttcacc tgatgctgtt acagcgtata
     4741 atggttatct tacttcttct tctaaaacac ctgaagaaca ttttattgaa accatctcac
     4801 ttgctggttc ctataaagat tggtcctatt ctggacaatc tacacaacta ggtatagaat
     4861 ttcttaagag aggtgataaa agtgtatatt acactagtaa tcctaccaca ttccacctag
     4921 atggtgaagt tatcaccttt gacaatctta agacacttct ttctttgaga gaagtgagga
     4981 ctattaaggt gtttacaaca gtagacaaca ttaacctcca cacgcaagtt gtggacatgt
     5041 caatgacata tggacaacag tttggtccaa cttatttgga tggagctgat gttactaaaa
     5101 taaaacctca taattcacat gaaggtaaaa cattttatgt tttacctaat gatgacactc
     5161 tacgtgttga ggcttttgag tactaccaca caactgatcc tagttttctg ggtaggtaca
     5221 tgtcagcatt aaatcacact aaaaagtgga aatacccaca agttaatggt ttaacttcta
     5281 ttaaatgggc agataacaac tgttatcttg ccactgcatt gttaacactc caacaaatag
     5341 agttgaagtt taatccacct gctctacaag atgcttatta cagagcaagg gctggtgaag
     5401 ctgctaactt ttgtgcactt atcttagcct actgtaataa gacagtaggt gagttaggtg
     5461 atgttagaga aacaatgagt tacttgtttc aacatgccaa tttagattct tgcaaaagag
     5521 tcttgaacgt ggtgtgtaaa acttgtggac aacagcagac aacccttaag ggtgtagaag
     5581 ctgttatgta catgggcaca ctttcttatg aacaatttaa gaaaggtgtt cagatacctt
     5641 gtacgtgtgg taaacaagct acaaaatatc tagtacaaca ggagtcacct tttgttatga
     5701 tgtcagcacc acctgctcag tatgaactta agcatggtac atttacttgt gctagtgagt
     5761 acactggtaa ttaccagtgt ggtcactata aacatataac ttctaaagaa actttgtatt
     5821 gcatagacgg tgctttactt acaaagtcct cagaatacaa aggtcctatt acggatgttt
     5881 tctacaaaga aaacagttac acaacaacca taaaaccagt tacttataaa ttggatggtg
     5941 ttgtttgtac agaaattgac cctaagttgg acaattatta taagaaagac aattcttatt
     6001 tcacagagca accaattgat cttgtaccaa accaaccata tccaaacgca agcttcgata
     6061 attttaagtt tgtatgtgat aatatcaaat ttgctgatga tttaaaccag ttaactggtt
     6121 ataagaaacc tgcttcaaga gagcttaaag ttacattttt ccctgactta aatggtgatg
     6181 tggtggctat tgattataaa cactacacac cctcttttaa gaaaggagct aaattgttac
     6241 ataaacctat tgtttggcat gttaacaatg caactaataa agccacgtat aaaccaaata
     6301 cctggtgtat acgttgtctt tggagcacaa aaccagttga aacatcaaat tcgtttgatg
     6361 tactgaagtc agaggacgcg cagggaatgg ataatcttgc ctgcgaagat ctaaaaccag
     6421 tctctgaaga agtagtggaa aatcctacca tacagaaaga cgttcttgag tgtaatgtga
     6481 aaactaccga agttgtagga gacattatac ttaaaccagc aaataatagt ttaaaaatta
     6541 cagaagaggt tggccacaca gatctaatgg ctgcttatgt agacaattct agtcttacta
     6601 ttaagaaacc taatgaatta tctagagtat taggtttgaa aacccttgct actcatggtt
     6661 tagctgctgt taatagtgtc ccttgggata ctatagctaa ttatgctaag ccttttctta
     6721 acaaagttgt tagtacaact actaacatag ttacacggtg tttaaaccgt gtttgtacta
     6781 attatatgcc ttatttcttt actttattgc tacaattgtg tacttttact agaagtacaa
     6841 attctagaat taaagcatct atgccgacta ctatagcaaa gaatactgtt aagagtgtcg
     6901 gtaaattttg tctagaggct tcatttaatt atttgaagtc acctaatttt tctaaactga
     6961 taaatattat aatttggttt ttactattaa gtgtttgcct aggttcttta atctactcaa
     7021 ccgctgcttt aggtgtttta atgtctaatt taggcatgcc ttcttactgt actggttaca
     7081 gagaaggcta tttgaactct actaatgtca ctattgcaac ctactgtact ggttctatac
     7141 cttgtagtgt ttgtcttagt ggtttagatt ctttagacac ctatccttct ttagaaacta
     7201 tacaaattac catttcatct tttaaatggg atttaactgc ttttggctta gttgcagagt
     7261 ggtttttggc atatattctt ttcactaggt ttttctatgt acttggattg gctgcaatca
     7321 tgcaattgtt tttcagctat tttgcagtac attttattag taattcttgg cttatgtggt
     7381 taataattaa tcttgtacaa atggccccga tttcagctat ggttagaatg tacatcttct
     7441 ttgcatcatt ttattatgta tggaaaagtt atgtgcatgt tgtagacggt tgtaattcat
     7501 caacttgtat gatgtgttac aaacgtaata gagcaacaag agtcgaatgt acaactattg
     7561 ttaatggtgt tagaaggtcc ttttatgtct atgctaatgg aggtaaaggc ttttgcaaac
     7621 tacacaattg gaattgtgtt aattgtgata cattctgtgc tggtagtaca tttattagtg
     7681 atgaagttgc gagagacttg tcactacagt ttaaaagacc aataaatcct actgaccagt
     7741 cttcttacat cgttgatagt gttacagtga agaatggttc catccatctt tactttgata
     7801 aagctggtca aaagacttat gaaagacatt ctctctctca ttttgttaac ttagacaacc
     7861 tgagagctaa taacactaaa ggttcattgc ctattaatgt tatagttttt gatggtaaat
     7921 caaaatgtga agaatcatct gcaaaatcag cgtctgttta ctacagtcag cttatgtgtc
     7981 aacctatact gttactagat caggcattag tgtctgatgt tggtgatagt gcggaagttg
     8041 cagttaaaat gtttgatgct tacgttaata cgttttcatc aacttttaac gtaccaatgg
     8101 aaaaactcaa aacactagtt gcaactgcag aagctgaact tgcaaagaat gtgtccttag
     8161 acaatgtctt atctactttt atttcagcag ctcggcaagg gtttgttgat tcagatgtag
     8221 aaactaaaga tgttgttgaa tgtcttaaat tgtcacatca atctgacata gaagttactg
     8281 gcgatagttg taataactat atgctcacct ataacaaagt tgaaaacatg acaccccgtg
     8341 accttggtgc ttgtattgac tgtagtgcgc gtcatattaa tgcgcaggta gcaaaaagtc
     8401 acaacattgc tttgatatgg aacgttaaag atttcatgtc attgtctgaa caactacgaa
     8461 aacaaatacg tagtgctgct aaaaagaata acttaccttt taagttgaca tgtgcaacta
     8521 ctagacaagt tgttaatgtt gtaacaacaa agatagcact taagggtggt aaaattgtta
     8581 ataattggtt gaagcagtta attaaagtta cacttgtgtt cctttttgtt gctgctattt
     8641 tctatttaat aacacctgtt catgtcatgt ctaaacatac tgacttttca agtgaaatca
     8701 taggatacaa ggctattgat ggtggtgtca ctcgtgacat agcatctaca gatacttgtt
     8761 ttgctaacaa acatgctgat tttgacacat ggtttagcca gcgtggtggt agttatacta
     8821 atgacaaagc ttgcccattg attgctgcag tcataacaag agaagtgggt tttgtcgtgc
     8881 ctggtttgcc tggcacgata ttacgcacaa ctaatggtga ctttttgcat ttcttaccta
     8941 gagtttttag tgcagttggt aacatctgtt acacaccatc aaaacttata gagtacactg
     9001 actttgcaac atcagcttgt gttttggctg ctgaatgtac aatttttaaa gatgcttctg
     9061 gtaagccagt accatattgt tatgatacca atgtactaga aggttctgtt gcttatgaaa
     9121 gtttacgccc tgacacacgt tatgtgctca tggatggctc tattattcaa tttcctaaca
     9181 cctaccttga aggttctgtt agagtggtaa caacttttga ttctgagtac tgtaggcacg
     9241 gcacttgtga aagatcagaa gctggtgttt gtgtatctac tagtggtaga tgggtactta
     9301 acaatgatta ttacagatct ttaccaggag ttttctgtgg tgtagatgct gtaaatttac
     9361 ttactaatat gtttacacca ctaattcaac ctattggtgc tttggacata tcagcatcta
     9421 tagtagctgg tggtattgta gctatcgtag taacatgcct tgcctactat tttatgaggt
     9481 ttagaagagc ttttggtgaa tacagtcatg tagttgcctt taatacttta ctattcctta
     9541 tgtcattcac tgtactctgt ttaacaccag tttactcatt cttacctggt gtttattctg
     9601 ttatttactt gtacttgaca ttttatctta ctaatgatgt ttctttttta gcacatattc
     9661 agtggatggt tatgttcaca cctttagtac ctttctggat aacaattgct tatatcattt
     9721 gtatttccac aaagcatttc tattggttct ttagtaatta cctaaagaga cgtgtagtct
     9781 ttaatggtgt ttcctttagt acttttgaag aagctgcgct gtgcaccttt ttgttaaata
     9841 aagaaatgta tctaaagttg cgtagtgatg tgctattacc tcttacgcaa tataatagat
     9901 acttagctct ttataataag tacaagtatt ttagtggagc aatggataca actagctaca
     9961 gagaagctgc ttgttgtcat ctcgcaaagg ctctcaatga cttcagtaac tcaggttctg
    10021 atgttcttta ccaaccacca caaacctcta tcacctcagc tgttttgcag agtggtttta
    10081 gaaaaatggc attcccatct ggtaaagttg agggttgtat ggtacaagta acttgtggta
    10141 caactacact taacggtctt tggcttgatg acgtagttta ctgtccaaga catgtgatct
    10201 gcacctctga agacatgctt aaccctaatt atgaagattt actcattcgt aagtctaatc
    10261 ataatttctt ggtacaggct ggtaatgttc aactcagggt tattggacat tctatgcaaa
    10321 attgtgtact taagcttaag gttgatacag ccaatcctaa gacacctaag tataagtttg
    10381 ttcgcattca accaggacag actttttcag tgttagcttg ttacaatggt tcaccatctg
    10441 gtgtttacca atgtgctatg aggcccaatt tcactattaa gggttcattc cttaatggtt
    10501 catgtggtag tgttggtttt aacatagatt atgactgtgt ctctttttgt tacatgcacc
    10561 atatggaatt accaactgga gttcatgctg gcacagactt agaaggtaac ttttatggac
    10621 cttttgttga caggcaaaca gcacaagcag ctggtacgga cacaactatt acagttaatg
    10681 ttttagcttg gttgtacgct gctgttataa atggagacag gtggtttctc aatcgattta
    10741 ccacaactct taatgacttt aaccttgtgg ctatgaagta caattatgaa cctctaacac
    10801 aagaccatgt tgacatacta ggacctcttt ctgctcaaac tggaattgcc gttttagata
    10861 tgtgtgcttc attaaaagaa ttactgcaaa atggtatgaa tggacgtacc atattgggta
    10921 gtgctttatt agaagatgaa tttacacctt ttgatgttgt tagacaatgc tcaggtgtta
    10981 ctttccaaag tgcagtgaaa agaacaatca agggtacaca ccactggttg ttactcacaa
    11041 ttttgacttc acttttagtt ttagtccaga gtactcaatg gtctttgttc ttttttttgt
    11101 atgaaaatgc ctttttacct tttgctatgg gtattattgc tatgtctgct tttgcaatga
    11161 tgtttgtcaa acataagcat gcatttctct gtttgttttt gttaccttct cttgccactg
    11221 tagcttattt taatatggtc tatatgcctg ctagttgggt gatgcgtatt atgacatggt
    11281 tggatatggt tgatactagt ttgtctggtt ttaagctaaa agactgtgtt atgtatgcat
    11341 cagctgtagt gttactaatc cttatgacag caagaactgt gtatgatgat ggtgctagga
    11401 gagtgtggac acttatgaat gtcttgacac tcgtttataa agtttattat ggtaatgctt
    11461 tagatcaagc catttccatg tgggctctta taatctctgt tacttctaac tactcaggtg
    11521 tagttacaac tgtcatgttt ttggccagag gtattgtttt tatgtgtgtt gagtattgcc
    11581 ctattttctt cataactggt aatacacttc agtgtataat gctagtttat tgtttcttag
    11641 gctatttttg tacttgttac tttggcctct tttgtttact caaccgctac tttagactga
    11701 ctcttggtgt ttatgattac ttagtttcta cacaggagtt tagatatatg aattcacagg
    11761 gactactccc acccaagaat agcatagatg ccttcaaact caacattaaa ttgttgggtg
    11821 ttggtggcaa accttgtatc aaagtagcca ctgtacagtc taaaatgtca gatgtaaagt
    11881 gcacatcagt agtcttactc tcagttttgc aacaactcag agtagaatca tcatctaaat
    11941 tgtgggctca atgtgtccag ttacacaatg acattctctt agctaaagat actactgaag
    12001 cctttgaaaa aatggtttca ctactttctg ttttgctttc catgcagggt gctgtagaca
    12061 taaacaagct ttgtgaagaa atgctggaca acagggcaac cttacaagct atagcctcag
    12121 agtttagttc ccttccatca tatgcagctt ttgctactgc tcaagaagct tatgagcagg
    12181 ctgttgctaa tggtgattct gaagttgttc ttaaaaagtt gaagaagtct ttgaatgtgg
    12241 ctaaatctga atttgaccgt gatgcagcca tgcaacgtaa gttggaaaag atggctgatc
    12301 aagctatgac ccaaatgtat aaacaggcta gatctgagga caagagggca aaagttacta
    12361 gtgctatgca gacaatgctt ttcactatgc ttagaaagtt ggataatgat gcactcaaca
    12421 acattatcaa caatgcaaga gatggttgtg ttcccttgaa cataatacct cttacaacag
    12481 cagccaaact aatggttgtc ataccagact ataacacata taaaaatacg tgtgatggta
    12541 caacatttac ttatgcatca gcattgtggg aaatccaaca ggttgtagat gcagatagta
    12601 aaattgttca acttagtgaa attagtatgg acaattcacc taatttagca tggcctctta
    12661 ttgtaacagc tttaagggcc aattctgctg tcaaattaca gaataatgag cttagtcctg
    12721 ttgcactacg acagatgtct tgtgctgccg gtactacaca aactgcttgc actgatgaca
    12781 atgcgttagc ttactacaac acaacaaagg gaggtaggtt tgtacttgca ctgttatccg
    12841 atttacagga tttgaaatgg gctagattcc ctaagagtga tggaactggt actatctata
    12901 cagaactgga accaccttgt aggtttgtta cagacacacc taaaggtcct aaagtgaagt
    12961 atttatactt tattaaagga ttaaacaacc taaatagagg tatggtactt ggtagtttag
    13021 ctgccacagt acgtctacaa gctggtaatg caacagaagt gcctgccaat tcaactgtat
    13081 tatctttctg tgcttttgct gtagatgctg ctaaagctta caaagattat ctagctagtg
    13141 ggggacaacc aatcactaat tgtgttaaga tgttgtgtac acacactggt actggtcagg
    13201 caataacagt tacaccggaa gccaatatgg atcaagaatc ctttggtggt gcatcgtgtt
    13261 gtctgtactg ccgttgccac atagatcatc caaatcctaa aggattttgt gacttaaaag
    13321 gtaagtatgt acaaatacct acaacttgtg ctaatgaccc tgtgggtttt acacttaaaa
    13381 acacagtctg taccgtctgc ggtatgtgga aaggttatgg ctgtagttgt gatcaactcc
    13441 gcgaacccat gcttcagtca gctgatgcac aatcgttttt aaacgggttt gcggtgtaag
    13501 tgcagcccgt cttacaccgt gcggcacagg cactagtact gatgtcgtat acagggcttt
    13561 tgacatctac aatgataaag tagctggttt tgctaaattc ctaaaaacta attgttgtcg
    13621 cttccaagaa aaggacgaag atgacaattt aattgattct tactttgtag ttaagagaca
    13681 cactttctct aactaccaac atgaagaaac aatttataat ttacttaagg attgtccagc
    13741 tgttgctaaa catgacttct ttaagtttag aatagacggt gacatggtac cacatatatc
    13801 acgtcaacgt cttactaaat acacaatggc agacctcgtc tatgctttaa ggcattttga
    13861 tgaaggtaat tgtgacacat taaaagaaat acttgtcaca tacaattgtt gtgatgatga
    13921 ttatttcaat aaaaaggact ggtatgattt tgtagaaaac ccagatatat tacgcgtata
    13981 cgccaactta ggtgaacgtg tacgccaagc tttgttaaaa acagtacaat tctgtgatgc
    14041 catgcgaaat gctggtattg ttggtgtact gacattagat aatcaagatc tcaatggtaa
    14101 ctggtatgat ttcggtgatt tcatacaaac cacgccaggt agtggagttc ctgttgtaga
    14161 ttcttattat tcattgttaa tgcctatatt aaccttgacc agggctttaa ctgcagagtc
    14221 acatgttgac actgacttaa caaagcctta cattaagtgg gatttgttaa aatatgactt
    14281 cacggaagag aggttaaaac tctttgaccg ttattttaaa tattgggatc agacatacca
    14341 cccaaattgt gttaactgtt tggatgacag atgcattctg cattgtgcaa actttaatgt
    14401 tttattctct acagtgttcc cacctacaag ttttggacca ctagtgagaa aaatatttgt
    14461 tgatggtgtt ccatttgtag tttcaactgg ataccacttc agagagctag gtgttgtaca
    14521 taatcaggat gtaaacttac atagctctag acttagtttt aaggaattac ttgtgtatgc
    14581 tgctgaccct gctatgcacg ctgcttctgg taatctatta ctagataaac gcactacgtg
    14641 cttttcagta gctgcactta ctaacaatgt tgcttttcaa actgtcaaac ccggtaattt
    14701 taacaaagac ttctatgact ttgctgtgtc taagggtttc tttaaggaag gaagttctgt
    14761 tgaattaaaa cacttcttct ttgctcagga tggtaatgct gctatcagcg attatgacta
    14821 ctatcgttat aatctaccaa caatgtgtga tatcagacaa ctactatttg tagttgaagt
    14881 tgttgataag tactttgatt gttacgatgg tggctgtatt aatgctaacc aagtcatcgt
    14941 caacaaccta gacaaatcag ctggttttcc atttaataaa tggggtaagg ctagacttta
    15001 ttatgattca atgagttatg aggatcaaga tgcacttttc gcatatacaa aacgtaatgt
    15061 catccctact ataactcaaa tgaatcttaa gtatgccatt agtgcaaaga atagagctcg
    15121 caccgtagct ggtgtctcta tctgtagtac tatgaccaat agacagtttc atcaaaaatt
    15181 attgaaatca atagccgcca ctagaggagc tactgtagta attggaacaa gcaaattcta
    15241 tggtggttgg cacaacatgt taaaaactgt ttatagtgat gtagaaaacc ctcaccttat
    15301 gggttgggat tatcctaaat gtgatagagc catgcctaac atgcttagaa ttatggcctc
    15361 acttgttctt gctcgcaaac atacaacgtg ttgtagcttg tcacaccgtt tctatagatt
    15421 agctaatgag tgtgctcaag tattgagtga aatggtcatg tgtggcggtt cactatatgt
    15481 taaaccaggt ggaacctcat caggagatgc cacaactgct tatgctaata gtgtttttaa
    15541 catttgtcaa gctgtcacgg ccaatgttaa tgcactttta tctactgatg gtaacaaaat
    15601 tgccgataag tatgtccgca atttacaaca cagactttat gagtgtctct atagaaatag
    15661 agatgttgac acagactttg tgaatgagtt ttacgcatat ttgcgtaaac atttctcaat
    15721 gatgatactc tctgacgatg ctgttgtgtg tttcaatagc acttatgcat ctcaaggtct
    15781 agtggctagc ataaagaact ttaagtcagt tctttattat caaaacaatg tttttatgtc
    15841 tgaagcaaaa tgttggactg agactgacct tactaaagga cctcatgaat tttgctctca
    15901 acatacaatg ctagttaaac agggtgatga ttatgtgtac cttccttacc cagatccatc
    15961 aagaatccta ggggccggct gttttgtaga tgatatcgta aaaacagatg gtacacttat
    16021 gattgaacgg ttcgtgtctt tagctataga tgcttaccca cttactaaac atcctaatca
    16081 ggagtatgct gatgtctttc atttgtactt acaatacata agaaagctac atgatgagtt
    16141 aacaggacac atgttagaca tgtattctgt tatgcttact aatgataaca cttcaaggta
    16201 ttgggaacct gagttttatg aggctatgta cacaccgcat acagtcttac aggctgttgg
    16261 ggcttgtgtt ctttgcaatt cacagacttc attaagatgt ggtgcttgca tacgtagacc
    16321 attcttatgt tgtaaatgct gttacgacca tgtcatatca acatcacata aattagtctt
    16381 gtctgttaat ccgtatgttt gcaatgctcc aggttgtgat gtcacagatg tgactcaact
    16441 ttacttagga ggtatgagct attattgtaa atcacataaa ccacccatta gttttccatt
    16501 gtgtgctaat ggacaagttt ttggtttata taaaaataca tgtgttggta gcgataatgt
    16561 tactgacttt aatgcaattg caacatgtga ctggacaaat gctggtgatt acattttagc
    16621 taacacctgt actgaaagac tcaagctttt tgcagcagaa acgctcaaag ctactgagga
    16681 gacatttaaa ctgtcttatg gtattgctac tgtacgtgaa gtgctgtctg acagagaatt
    16741 acatctttca tgggaagttg gtaaacctag accaccactt aaccgaaatt atgtctttac
    16801 tggttatcgt gtaactaaaa acagtaaagt acaaatagga gagtacacct ttgaaaaagg
    16861 tgactatggt gatgctgttg tttaccgagg tacaacaact tacaaattaa atgttggtga
    16921 ttattttgtg ctgacatcac atacagtaat gccattaagt gcacctacac tagtgccaca
    16981 agagcactat gttagaatta ctggcttata cccaacactc aatatctcag atgagttttc
    17041 tagcaatgtt gcaaattatc aaaaggttgg tatgcaaaag tattctacac tccagggacc
    17101 acctggtact ggtaagagtc attttgctat tggcctagct ctctactacc cttctgctcg
    17161 catagtgtat acagcttgct ctcatgccgc tgttgatgca ctatgtgaga aggcattaaa
    17221 atatttgcct atagataaat gtagtagaat tatacctgca cgtgctcgtg tagagtgttt
    17281 tgataaattc aaagtgaatt caacattaga acagtatgtc ttttgtactg taaatgcatt
    17341 gcctgagacg acagcagata tagttgtctt tgatgaaatt tcaatggcca caaattatga
    17401 tttgagtgtt gtcaatgcca gattacgtgc taagcactat gtgtacattg gcgaccctgc
    17461 tcaattacct gcaccacgca cattgctaac taagggcaca ctagaaccag aatatttcaa
    17521 ttcagtgtgt agacttatga aaactatagg tccagacatg ttcctcggaa cttgtcggcg
    17581 ttgtcctgct gaaattgttg acactgtgag tgctttggtt tatgataata agcttaaagc
    17641 acataaagac aaatcagctc aatgctttaa aatgttttat aagggtgtta tcacgcatga
    17701 tgtttcatct gcaattaaca ggccacaaat aggcgtggta agagaattcc ttacacgtaa
    17761 ccctgcttgg agaaaagctg tctttatttc accttataat tcacagaatg ctgtagcctc
    17821 aaagattttg ggactaccaa ctcaaactgt tgattcatca cagggctcag aatatgacta
    17881 tgtcatattc actcaaacca ctgaaacagc tcactcttgt aatgtaaaca gatttaatgt
    17941 tgctattacc agagcaaaag taggcatact ttgcataatg tctgatagag acctttatga
    18001 caagttgcaa tttacaagtc ttgaaattcc acgtaggaat gtggcaactt tacaagctga
    18061 aaatgtaaca ggactcttta aagattgtag taaggtaatc actgggttac atcctacaca
    18121 ggcacctaca cacctcagtg ttgacactaa attcaaaact gaaggtttat gtgttgacat
    18181 acctggcata cctaaggaca tgacctatag aagactcatc tctatgatgg gttttaaaat
    18241 gaattatcaa gttaatggtt accctaacat gtttatcacc cgcgaagaag ctataagaca
    18301 tgtacgtgca tggattggct tcgatgtcga ggggtgtcat gctactagag aagctgttgg
    18361 taccaattta cctttacagc taggtttttc tacaggtgtt aacctagttg ctgtacctac
    18421 aggttatgtt gatacaccta ataatacaga tttttccaga gttagtgcta aaccaccgcc
    18481 tggagatcaa tttaaacacc tcataccact tatgtacaaa ggacttcctt ggaatgtagt
    18541 gcgtataaag attgtacaaa tgttaagtga cacacttaaa aatctctctg acagagtcgt
    18601 atttgtctta tgggcacatg gctttgagtt gacatctatg aagtattttg tgaaaatagg
    18661 acctgagcgc acctgttgtc tatgtgatag acgtgccaca tgcttttcca ctgcttcaga
    18721 cacttatgcc tgttggcatc attctattgg atttgattac gtctataatc cgtttatgat
    18781 tgatgttcaa caatggggtt ttacaggtaa cctacaaagc aaccatgatc tgtattgtca
    18841 agtccatggt aatgcacatg tagctagttg tgatgcaatc atgactaggt gtctagctgt
    18901 ccacgagtgc tttgttaagc gtgttgactg gactattgaa tatcctataa ttggtgatga
    18961 actgaagatt aatgcggctt gtagaaaggt tcaacacatg gttgttaaag ctgcattatt
    19021 agcagacaaa ttcccagttc ttcacgacat tggtaaccct aaagctatta agtgtgtacc
    19081 tcaagctgat gtagaatgga agttctatga tgcacagcct tgtagtgaca aagcttataa
    19141 aatagaagaa ttattctatt cttatgccac acattctgac aaattcacag atggtgtatg
    19201 cctattttgg aattgcaatg tcgatagata tcctgctaat tccattgttt gtagatttga
    19261 cactagagtg ctatctaacc ttaacttgcc tggttgtgat ggtggcagtt tgtatgtaaa
    19321 taaacatgca ttccacacac cagcttttga taaaagtgct tttgttaatt taaaacaatt
    19381 accatttttc tattactctg acagtccatg tgagtctcat ggaaaacaag tagtgtcaga
    19441 tatagattat gtaccactaa agtctgctac gtgtataaca cgttgcaatt taggtggtgc
    19501 tgtctgtaga catcatgcta atgagtacag attgtatctc gatgcttata acatgatgat
    19561 ctcagctggc tttagcttgt gggtttacaa acaatttgat acttataacc tctggaacac
    19621 ttttacaaga cttcagagtt tagaaaatgt ggcttttaat gttgtaaata agggacactt
    19681 tgatggacaa cagggtgaag taccagtttc tatcattaat aacactgttt acacaaaagt
    19741 tgatggtgtt gatgtagaat tgtttgaaaa taaaacaaca ttacctgtta atgtagcatt
    19801 tgagctttgg gctaagcgca acattaaacc agtaccagag gtgaaaatac tcaataattt
    19861 gggtgtggac attgctgcta atactgtgat ctgggactac aaaagagatg ctccagcaca
    19921 tatatctact attggtgttt gttctatgac tgacatagcc aagaaaccaa ctgaaacgat
    19981 ttgtgcacca ctcactgtct tttttgatgg tagagttgat ggtcaagtag acttatttag
    20041 aaatgcccgt aatggtgttc ttattacaga aggtagtgtt aaaggtttac aaccatctgt
    20101 aggtcccaaa caagctagtc ttaatggagt cacattaatt ggagaagccg taaaaacaca
    20161 gttcaattat tataagaaag ttgatggtgt tgtccaacaa ttacctgaaa cttactttac
    20221 tcagagtaga aatttacaag aatttaaacc caggagtcaa atggaaattg atttcttaga
    20281 attagctatg gatgaattca ttgaacggta taaattagaa ggctatgcct tcgaacatat
    20341 cgtttatgga gattttagtc atagtcagtt aggtggttta catctactga ttggactagc
    20401 taaacgtttt aaggaatcac cttttgaatt agaagatttt attcctatgg acagtacagt
    20461 taaaaactat ttcataacag atgcgcaaac aggttcatct aagtgtgtgt gttctgttat
    20521 tgatttatta cttgatgatt ttgttgaaat aataaaatcc caagatttat ctgtagtttc
    20581 taaggttgtc aaagtgacta ttgactatac agaaatttca tttatgcttt ggtgtaaaga
    20641 tggccatgta gaaacatttt acccaaaatt acaatctagt caagcgtggc aaccgggtgt
    20701 tgctatgcct aatctttaca aaatgcaaag aatgctatta gaaaagtgtg accttcaaaa
    20761 ttatggtgat agtgcaacat tacctaaagg cataatgatg aatgtcgcaa aatatactca
    20821 actgtgtcaa tatttaaaca cattaacatt agctgtaccc tataatatga gagttataca
    20881 ttttggtgct ggttctgata aaggagttgc accaggtaca gctgttttaa gacagtggtt
    20941 gcctacgggt acgctgcttg tcgattcaga tcttaatgac tttgtctctg atgcagattc
    21001 aactttgatt ggtgattgtg caactgtaca tacagctaat aaatgggatc tcattattag
    21061 tgatatgtac gaccctaaga ctaaaaatgt tacaaaagaa aatgactcta aagagggttt
    21121 tttcacttac atttgtgggt ttatacaaca aaagctagct cttggaggtt ccgtggctat
    21181 aaagataaca gaacattctt ggaatgctga tctttataag ctcatgggac acttcgcatg
    21241 gtggacagcc tttgttacta atgtgaatgc gtcatcatct gaagcatttt taattggatg
    21301 taattatctt ggcaaaccac gcgaacaaat agatggttat gtcatgcatg caaattacat
    21361 attttggagg aatacaaatc caattcagtt gtcttcctat tctttatttg acatgagtaa
    21421 atttcccctt aaattaaggg gtactgctgt tatgtcttta aaagaaggtc aaatcaatga
    21481 tatgatttta tctcttctta gtaaaggtag acttataatt agagaaaaca acagagttgt
    21541 tatttctagt gatgttcttg ttaacaacta aacgaacaat gtttgttttt cttgttttat
    21601 tgccactagt ctctagtcag tgtgttaatc ttacaaccag aactcaatta ccccctgcat
    21661 acactaattc tttcacacgt ggtgtttatt accctgacaa agttttcaga tcctcagttt
    21721 tacattcaac tcaggacttg ttcttacctt tcttttccaa tgttacttgg ttccatgcta
    21781 tacatgtctc tgggaccaat ggtactaaga ggtttgataa ccctgtccta ccatttaatg
    21841 atggtgttta ttttgcttcc actgagaagt ctaacataat aagaggctgg atttttggta
    21901 ctactttaga ttcgaagacc cagtccctac ttattgttaa taacgctact aatgttgtta
    21961 ttaaagtctg tgaatttcaa ttttgtaatg atccattttt gggtgtttat taccacaaaa
    22021 acaacaaaag ttggatggaa agtgagttca gagtttattc tagtgcgaat aattgcactt
    22081 ttgaatatgt ctctcagcct tttcttatgg accttgaagg aaaacagggt aatttcaaaa
    22141 atcttaggga atttgtgttt aagaatattg atggttattt taaaatatat tctaagcaca
    22201 cgcctattaa tttagtgcgt gatctccctc agggtttttc ggctttagaa ccattggtag
    22261 atttgccaat aggtattaac atcactaggt ttcaaacttt acttgcttta catagaagtt
    22321 atttgactcc tggtgattct tcttcaggtt ggacagctgg tgctgcagct tattatgtgg
    22381 gttatcttca acctaggact tttctattaa aatataatga aaatggaacc attacagatg
    22441 ctgtagactg tgcacttgac cctctctcag aaacaaagtg tacgttgaaa tccttcactg
    22501 tagaaaaagg aatctatcaa acttctaact ttagagtcca accaacagaa tctattgtta
    22561 gatttcctaa tattacaaac ttgtgccctt ttggtgaagt ttttaacgcc accagatttg
    22621 catctgttta tgcttggaac aggaagagaa tcagcaactg tgttgctgat tattctgtcc
    22681 tatataattc cgcatcattt tccactttta agtgttatgg agtgtctcct actaaattaa
    22741 atgatctctg ctttactaat gtctatgcag attcatttgt aattagaggt gatgaagtca
    22801 gacaaatcgc tccagggcaa actggaaaga ttgctgatta taattataaa ttaccagatg
    22861 attttacagg ctgcgttata gcttggaatt ctaacaatct tgattctaag gttggtggta
    22921 attataatta cctgtataga ttgtttagga agtctaatct caaacctttt gagagagata
    22981 tttcaactga aatctatcag gccggtagca caccttgtaa tggtgttgaa ggttttaatt
    23041 gttactttcc tttacaatca tatggtttcc aacccactaa tggtgttggt taccaaccat
    23101 acagagtagt agtactttct tttgaacttc tacatgcacc agcaactgtt tgtggaccta
    23161 aaaagtctac taatttggtt aaaaacaaat gtgtcaattt caacttcaat ggtttaacag
    23221 gcacaggtgt tcttactgag tctaacaaaa agtttctgcc tttccaacaa tttggcagag
    23281 acattgctga cactactgat gctgtccgtg atccacagac acttgagatt cttgacatta
    23341 caccatgttc ttttggtggt gtcagtgtta taacaccagg aacaaatact tctaaccagg
    23401 ttgctgttct ttatcaggat gttaactgca cagaagtccc tgttgctatt catgcagatc
    23461 aacttactcc tacttggcgt gtttattcta caggttctaa tgtttttcaa acacgtgcag
    23521 gctgtttaat aggggctgaa catgtcaaca actcatatga gtgtgacata cccattggtg
    23581 caggtatatg cgctagttat cagactcaga ctaattctcc tcggcgggca cgtagtgtag
    23641 ctagtcaatc catcattgcc tacactatgt cacttggtgc agaaaattca gttgcttact
    23701 ctaataactc tattgccata cccacaaatt ttactattag tgttaccaca gaaattctac
    23761 cagtgtctat gaccaagaca tcagtagatt gtacaatgta catttgtggt gattcaactg
    23821 aatgcagcaa tcttttgttg caatatggca gtttttgtac acaattaaac cgtgctttaa
    23881 ctggaatagc tgttgaacaa gacaaaaaca cccaagaagt ttttgcacaa gtcaaacaaa
    23941 tttacaaaac accaccaatt aaagattttg gtggttttaa tttttcacaa atattaccag
    24001 atccatcaaa accaagcaag aggtcattta ttgaagatct acttttcaac aaagtgacac
    24061 ttgcagatgc tggcttcatc aaacaatatg gtgattgcct tggtgatatt gctgctagag
    24121 acctcatttg tgcacaaaag tttaacggcc ttactgtttt gccacctttg ctcacagatg
    24181 aaatgattgc tcaatacact tctgcactgt tagcgggtac aatcacttct ggttggacct
    24241 ttggtgcagg tgctgcatta caaataccat ttgctatgca aatggcttat aggtttaatg
    24301 gtattggagt tacacagaat gttctctatg agaaccaaaa attgattgcc aaccaattta
    24361 atagtgctat tggcaaaatt caagactcac tttcttccac agcaagtgca cttggaaaac
    24421 ttcaagatgt ggtcaaccaa aatgcacaag ctttaaacac gcttgttaaa caacttagct
    24481 ccaattttgg tgcaatttca agtgttttaa atgatatcct ttcacgtctt gacaaagttg
    24541 aggctgaagt gcaaattgat aggttgatca caggcagact tcaaagtttg cagacatatg
    24601 tgactcaaca attaattaga gctgcagaaa tcagagcttc tgctaatctt gctgctacta
    24661 aaatgtcaga gtgtgtactt ggacaatcaa aaagagttga tttttgtgga aagggctatc
    24721 atcttatgtc cttccctcag tcagcacctc atggtgtagt cttcttgcat gtgacttatg
    24781 tccctgcaca agaaaagaac ttcacaactg ctcctgccat ttgtcatgat ggaaaagcac
    24841 actttcctcg tgaaggtgtc tttgtttcaa atggcacaca ctggtttgta acacaaagga
    24901 atttttatga accacaaatc attactacag acaacacatt tgtgtctggt aactgtgatg
    24961 ttgtaatagg aattgtcaac aacacagttt atgatccttt gcaacctgaa ttagactcat
    25021 tcaaggagga gttagataaa tattttaaga atcatacatc accagatgtt gatttaggtg
    25081 acatctctgg cattaatgct tcagttgtaa acattcaaaa agaaattgac cgcctcaatg
    25141 aggttgccaa gaatttaaat gaatctctca tcgatctcca agaacttgga aagtatgagc
    25201 agtatataaa atggccatgg tacatttggc taggttttat agctggcttg attgccatag
    25261 taatggtgac aattatgctt tgctgtatga ccagttgctg tagttgtctc aagggctgtt
    25321 gttcttgtgg atcctgctgc aaatttgatg aagacgactc tgagccagtg ctcaaaggag
    25381 tcaaattaca ttacacataa acgaacttat ggatttgttt atgagaatct tcacaattgg
    25441 aactgtaact ttgaagcaag gtgaaatcaa ggatgctact ccttcagatt ttgttcgcgc
    25501 tactgcaacg ataccgatac aagcctcact ccctttcgga tggcttattg ttggcgttgc
    25561 acttcttgct gtttttcaga gcgcttccaa aatcataacc ctcaaaaaga gatggcaact
    25621 agcactctcc aagggtgttc actttgtttg caacttgctg ttgttgtttg taacagttta
    25681 ctcacacctt ttgctcgttg ctgctggcct tgaagcccct tttctctatc tttatgcttt
    25741 agtctacttc ttgcagagta taaactttgt aagaataata atgaggcttt ggctttgctg
    25801 gaaatgccgt tccaaaaacc cattacttta tgatgccaac tattttcttt gctggcatac
    25861 taattgttac gactattgta taccttacaa tagtgtaact tcttcaattg tcattacttc
    25921 aggtgatggc acaacaagtc ctatttctga acatgactac cagattggtg gttatactga
    25981 aaaatgggaa tctggagtaa aagactgtgt tgtattacac agttacttca cttcagacta
    26041 ttaccagctg tactcaactc aattgagtac agacactggt gttgaacatg ttaccttctt
    26101 catctacaat aaaattgttg atgagcctga agaacatgtc caaattcaca caatcgacgg
    26161 ttcatccgga gttgttaatc cagtaatgga accaatttat gatgaaccga cgacgactac
    26221 tagcgtgcct ttgtaagcac aagctgatga gtacgaactt atgtactcat tcgtttcgga
    26281 agagacaggt acgttaatag ttaatagcgt acttcttttt cttgctttcg tggtattctt
    26341 gctagttaca ctagccatcc ttactgcgct tcgattgtgt gcgtactgct gcaatattgt
    26401 taacgtgagt cttgtaaaac cttcttttta cgtttactct cgtgttaaaa atctgaattc
    26461 ttctagagtt cctgatcttc tggtctaaac gaactaaata ttatattagt ttttctgttt
    26521 ggaactttaa ttttagccat ggcagattcc aacggtacta ttaccgttga agagcttaaa
    26581 aagctccttg aacaatggaa cctagtaata ggtttcctat tccttacatg gatttgtctt
    26641 ctacaatttg cctatgccaa caggaatagg tttttgtata taattaagtt aattttcctc
    26701 tggctgttat ggccagtaac tttagcttgt tttgtgcttg ctgctgttta cagaataaat
    26761 tggatcaccg gtggaattgc tatcgcaatg gcttgtcttg taggcttgat gtggctcagc
    26821 tacttcattg cttctttcag actgtttgcg cgtacgcgtt ccatgtggtc attcaatcca
    26881 gaaactaaca ttcttctcaa cgtgccactc catggcacta ttctgaccag accgcttcta
    26941 gaaagtgaac tcgtaatcgg agctgtgatc cttcgtggac atcttcgtat tgctggacac
    27001 catctaggac gctgtgacat caaggacctg cctaaagaaa tcactgttgc tacatcacga
    27061 acgctttctt attacaaatt gggagcttcg cagcgtgtag caggtgactc aggttttgct
    27121 gcatacagtc gctacaggat tggcaactat aaattaaaca cagaccattc cagtagcagt
    27181 gacaatattg ctttgcttgt acagtaagtg acaacagatg tttcatctcg ttgactttca
    27241 ggttactata gcagagatat tactaattat tatgaggact tttaaagttt ccatttggaa
    27301 tcttgattac atcataaacc tcataattaa aaatttatct aagtcactaa ctgagaataa
    27361 atattctcaa ttagatgaag agcaaccaat ggagattgat taaacgaaca tgaaaattat
    27421 tcttttcttg gcactgataa cactcgctac ttgtgagctt tatcactacc aagagtgtgt
    27481 tagaggtaca acagtacttt taaaagaacc ttgctcttct ggaacatacg agggcaattc
    27541 accatttcat cctctagctg ataacaaatt tgcactgact tgctttagca ctcaatttgc
    27601 ttttgcttgt cctgacggcg taaaacacgt ctatcagtta cgtgccagat cagtttcacc
    27661 taaactgttc atcagacaag aggaagttca agaactttac tctccaattt ttcttattgt
    27721 tgcggcaata gtgtttataa cactttgctt cacactcaaa agaaagacag aatgattgaa
    27781 ctttcattaa ttgacttcta tttgtgcttt ttagcctttc tgctattcct tgttttaatt
    27841 atgcttatta tcttttggtt ctcacttgaa ctgcaagatc ataatgaaac ttgtcacgcc
    27901 taaacgaaca tgaaatttct tgttttctta ggaatcatca caactgtagc tgcatttcac
    27961 caagaatgta gtttacagtc atgtactcaa catcaaccat atgtagttga tgacccgtgt
    28021 cctattcact tctattctaa atggtatatt agagtaggag ctagaaaatc agcaccttta
    28081 attgaattgt gcgtggatga ggctggttct aaatcaccca ttcagtacat cgatatcggt
    28141 aattatacag tttcctgttt accttttaca attaattgcc aggaacctaa attgggtagt
    28201 cttgtagtgc gttgttcgtt ctatgaagac tttttagagt atcatgacgt tcgtgttgtt
    28261 ttagatttca tctaaacgaa caaactaaaa tgtctgataa tggaccccaa aatcagcgaa
    28321 atgcaccccg cattacgttt ggtggaccct cagattcaac tggcagtaac cagaatggag
    28381 aacgcagtgg ggcgcgatca aaacaacgtc ggccccaagg tttacccaat aatactgcgt
    28441 cttggttcac cgctctcact caacatggca aggaagacct taaattccct cgaggacaag
    28501 gcgttccaat taacaccaat agcagtccag atgaccaaat tggctactac cgaagagcta
    28561 ccagacgaat tcgtggtggt gacggtaaaa tgaaagatct cagtccaaga tggtatttct
    28621 actacctagg aactgggcca gaagctggac ttccctatgg tgctaacaaa gacggcatca
    28681 tatgggttgc aactgaggga gccttgaata caccaaaaga tcacattggc acccgcaatc
    28741 ctgctaacaa tgctgcaatc gtgctacaac ttcctcaagg aacaacattg ccaaaaggct
    28801 tctacgcaga agggagcaga ggcggcagtc aagcctcttc tcgttcctca tcacgtagtc
    28861 gcaacagttc aagaaattca actccaggca gcagtagggg aacttctcct gctagaatgg
    28921 ctggcaatgg cggtgatgct gctcttgctt tgctgctgct tgacagattg aaccagcttg
    28981 agagcaaaat gtctggtaaa ggccaacaac aacaaggcca aactgtcact aagaaatctg
    29041 ctgctgaggc ttctaagaag cctcggcaaa aacgtactgc cactaaagca tacaatgtaa
    29101 cacaagcttt cggcagacgt ggtccagaac aaacccaagg aaattttggg gaccaggaac
    29161 taatcagaca aggaactgat tacaaacatt ggccgcaaat tgcacaattt gcccccagcg
    29221 cttcagcgtt cttcggaatg tcgcgcattg gcatggaagt cacaccttcg ggaacgtggt
    29281 tgacctacac agctgccatc aaattggatg acaaagatcc aaatttcaaa gatcaagtca
    29341 ttttgctgaa taagcatatt gacgcataca aaacattccc accaacagag cctaaaaagg
    29401 acaaaaagaa gaaggctgat gaaactcaag ccttaccgca gagacagaag aaacagcaaa
    29461 ctgtgactct tcttcctgct gcagatttgg atgatttctc caaacaattg caacaatcca
    29521 tgagcagtgc tgactcaact caggcctaaa ctcatgcaga ccacacaagg cagatgggct
    29581 atataaacgt tttcgctttt ccgtttacga tatatagtct actcttgtgc agaatgaatt
    29641 ctcgtaacta catagcacaa gtagatgtag ttaactttaa tctcacatag caatctttaa
    29701 tcagtgtgta acattaggga ggacttgaaa gagccaccac attttcaccg aggccacgcg
    29761 gagtacgatc gagtgtacag tgaacaatgc tagggagagc tgcctatatg gaagagccct
    29821 aatgtgtaaa attaatttta gtagtgctat ccccatgtga ttttaatagc ttcttcctgg
    29881 gatcttgatt tcaacagcct cttcctcata ctattctcaa cactactgtc agtgaacttc
    29941 taaaaatgga ttctgtgttt gaccgtagga aacatttcag tattccttat ctttagaaac
    30001 ctctgcaact caagtgtctc tgccaaagag tcttcaaggt aatgtcaaat accataacat
    30061 attttttaag tttttgtata cttcctagga atatatgtca tagtatgtaa agaagatctg
    30121 attcatgtga tctgtactgt taagaaacac ttcaaaggaa aacaacctct catagatctt
    30181 caaatcctgt tgttcttgag ttggaatgta caatattcag gtagagatgc tggtacaaaa
    30241 aaagactgaa tcatcaggct attagaaaga taaactaggc ctctaacata gtaactttaa
    30301 cagtttgtac ttatacatat tttcacattg aaatatagtt ttattcatga ctttttttgt
    30361 tttagcttct ctgtcttcca ttatttcaag ctgctaaaaa ttaaaaatat cctatagcaa
    30421 agggctatgg catctttttg taaaaataag gaaagcaagg ttttttgata atc

https://www.ncbi.nlm.nih.gov/nuccore/mn908947

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Top 10 protein matches for ORF 8

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
242 242 100% 8e-81 94.21% AVP78037.1
168 168 100% 2e-51 57.85% AHX37565.1
164 164 100% 3e-50 58.68% ACU31043.1
164 164 100% 9e-50 58.68% AGZ48814.1
163 163 100% 1e-49 57.85% AGZ48826.1
162 162 100% 4e-49 57.85% ALK02466.1
161 161 100% 6e-49 57.85% ATO98239.1
160 160 100% 2e-48 57.02% ATO98189.1
160 160 100% 2e-48 57.02% Q3LZX5.1
160 160 100% 2e-48 57.02% ATO98227.1

 

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  • niman changed the title to Wuhan Coronavirus 2019-nCoV Sequences

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