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Pandemic Potentials Blog

niman

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Everything posted by niman

  1. USA/MD-MDH-0894/2021 2/6 Maryland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  2. USA/MD-MDH-0896/2021 2/6 Maryland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  3. USA/MD-MDH-0890/2021 2/5 Maryland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  4. USA/MD-MDH-0891/2021 2/5 Maryland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  5. USA/MD-MDH-0892/2021 2/5 Marylandmatched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  6. USA/MD-MDH-0897/2021 2/3 Maryland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.121241817138866%2C-77.11930791532552&z=10
  7. MD PHL has released (at GISAID) 19 UK variant (B.1.1.7) sequences collected Jan 19 - Feb 9 USA/MD-MDH-0897/2021 2/3 USA/MD-MDH-0892/2021 2/5 USA/MD-MDH-0891/2021 2/5 USA/MD-MDH-0890/2021 2/5 USA/MD-MDH-0896/2021 2/6 USA/MD-MDH-0894/2021 2/6 USA/MD-MDH-0898/2021 2/9 USA/MD-MDH-0846/2021 2/4 USA/MD-MDH-0848/2021 1/20 USA/MD-MDH-0839/2021 1/28 USA/MD-MDH-0845/2021 2/4 USA/MD-MDH-0838/2021 2/1 USA/MD-MDH-0844/2021 2/4 USA/MD-MDH-0829/2021 1/19 USA/MD-MDH-0815/2021 1/21 USA/MD-MDH-0814/2021 1/21 USA/MD-MDH-0817/2021 1/28 USA/MD-MDH-0794/2021 1/28 USA/MD-MDH-0792/2021 1/27
  8. USA/IN-CDC-STM-000004224/2021 41-50M Indiana map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.67611112350106%2C-86.54335802698543&z=9
  9. USA/IN-CDC-STM-000003503/2021 11-20M Indiana map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.67611112350106%2C-86.54335802698543&z=9
  10. Helix B.1.1.7 sequences from Indiana in progress https://www.helix.com/pages/helix-covid-19-surveillance-dashboard USA/IN-CDC-STM-000003503/2021 11-20M Indiana USA/IN-CDC-STM-000004224/2021 41-50M Indiana
  11. USA/IN-CDC-STM-000005909/2021 1/28 16F Indiana matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.67611112350106%2C-86.54335802698543&z=9
  12. CDC has released (at GISAID) a UK variant (B.1.1.7) sequence collected Jan 28 USA/IN-CDC-STM-000005909/2021 1/28 16F Indiana
  13. USA/IN-PU-LH000145185/2021 1/26 Tippecanoe matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.40086955938274%2C-87.04390998836301&z=11
  14. USA/IN-PU-LH000145107/2021 1/28 Tippecanoe matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.40086955938274%2C-87.04390998836301&z=11
  15. USA/IN-PU-LH000115045/2021 1/22 Tippecanoe matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.40086955938274%2C-87.04390998836301&z=11
  16. Carpi Lab has released (at GISAID) Three UK variant (B.1.1.7) sequences collected in Tippecanoe County Jan 22-28 USA/IN-PU-LH000115045/2021 1/22 Tippecanoe County Indiana USA/IN-PU-LH000145107/2021 1/28 Tippecanoe County Indiana USA/IN-PU-LH000145185/2021 1/26 Tippecanoe County Indiana
  17. Scotland/QEUH-10673CF/2021 1/17 Glasgow Scotland matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=55.947883515082566%2C-4.85987033203312&z=8
  18. COG-UK has released (at GISAID) a UK variant (B.1.1.7) sequence collected in Glasgow on Jan 17 Scotland/QEUH-10673CF/2021 1/17 Glasgow Scotland
  19. England/ALDP-1279207/2021 2/9 Alderley Park England matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=53.16156903277907%2C-2.9515164500212565&z=8
  20. COG-UK has released (at GISAID) a UK variant (B.1.1.7) sequence collected in Alderley Park on Feb 9 England/ALDP-1279207/2021 2/9 Alderley Park England
  21. USA/LA-CDC-STM-000005831/2021 11-20M Louisiana map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=30.664431791935016%2C-90.79628523769532&z=8
  22. Below is Helix in progress B.1.1.7 cases in Louisiana https://www.helix.com/pages/helix-covid-19-surveillance-dashboard USA/LA-CDC-STM-000005831/2021 11-20M Louisiana
  23. USA/LA-CDC-STM-000004235/2021 1/22 39F Louisiana matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.850497314372483%2C-91.71400242353593&z=8
  24. USA/LA-CDC-STM-000005393/2021 1/25 48F Louisiana matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.850497314372483%2C-91.71400242353593&z=8
  25. USA/LA-CDC-STM-000001606/2021 1/11 52M Louisiana matched B.1.1.7 variant with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=29.850497314372483%2C-91.71400242353593&z=8

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