Everything posted by niman
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20 UK Variant B.1.1.7 COVID Sequences From Reykjavik Iceland
Iceland/6293/2020 12/2 matched UK B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=64.60145972904576%2C-24.115525371184603&z=6
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20 UK Variant B.1.1.7 COVID Sequences From Reykjavik Iceland
Iceland/6449/2020 12/28 matched UK B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=64.60145972904576%2C-24.115525371184603&z=6
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20 UK Variant B.1.1.7 COVID Sequences From Reykjavik Iceland
Iceland/6447/2020 12/28 matched UK B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 and Q27 stop codon in NS8. map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=64.60145972904576%2C-24.115525371184603&z=6
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20 UK Variant B.1.1.7 COVID Sequences From Reykjavik Iceland
deCODE genetics has released (at GISAID) 20 UK Variant B.1.1.7 SARS CoV2 sequences (Iceland/6447/2020, Iceland/6449/2020, Iceland/6293/2020, Iceland/6023/2020, Iceland/5742/2020, Iceland/4965/2020, Iceland/4448/2020, Iceland/4325/2020, Iceland/4061/2021, Iceland/4257/2020, Iceland/4230/2021, Iceland/4229/2021, Iceland/4234/2020, Iceland/4395/2020, Iceland/3452/2020, Iceland/3024/2020, Iceland/3027/2020, Iceland/3705/2020, Iceland/3763/2020, Iceland/3993/2020) from Reykjavik collected Dec 2 - Jan 5.
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UK Variant B.1.1.7 SARS-CoV2 COVID In Multnomah Co Oregon
USA/OR-CDC-STM-UNK91/2021 Multnomah County USA/OR-UW-63893956/2021 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=45.50683915461052%2C-122.75451428226272&z=10
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UK Variant B.1.1.7 SARS-CoV2 COVID In Multnomah Co Oregon
The sequence for the Multnomah County case has not been released. it will be assigned an UNK number, which will be updated when released. USA/OR-CDC-STM-UNK91/2021 USA/OR-UW-63893956/2021 Oregon Health Authority has been notified today that a person in Oregon, identified as a Multnomah County resident, has tested positive with the variant COVID-19 virus strain originally detected in the United Kingdom. This is the first identification in Oregon of the United Kingdom variant strain, also called strain B.1.1.7 or SARS-CoV-2 VOC 202012/01. The individual has no known travel history. Health officials are still investigating the possible sources of infection. https://content.govdelivery.com/accounts/ORDHS/bulletins/2b9a655
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UK Variant B.1.1.7 SARS CoV2 COVID Sequence From Dallas Texas
USA/TX-CDC-STM-UNK90/2020 Dallas map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=32.58799236982688%2C-97.49851737823761&z=8
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UK Variant B.1.1.7 SARS CoV2 COVID Sequence From Dallas Texas
The sequence of the Dallas case below has not been released, so it will be assigned an UNK number, which will be updated upon release USA/TX-CDC-STM-UNK90/2020 Dallas
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012827/2021 1/5 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012837/2021 1/5 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012790/2020 12/29 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012848/2021 1/6 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012800/2021 1/6 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012824/2021 1/4 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012764/2020 12/24 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
Spain/IB-IBV-99012764/2020 12/24 matched B.1.1.7 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=39.494611298301656%2C2.4049083150609674&z=9
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23 UK Variant B.1.1.7 COVID Sequence From Palma de Mallorca Spain
CSIC has released (at GISAID) 7 UK Variant B.1.1.7 SARS CoV2 sequences, (Spain/IB-IBV-99012764/2020, Spain/IB-IBV-99012846/2020, Spain/IB-IBV-99012824/2021, Spain/IB-IBV-99012800/2021, Spain/IB-IBV-99012848/2021, Spain/IB-IBV-99012790/2020, Spain/IB-IBV-99012837/2021, Spain/IB-IBV-99012827/2021, Spain/IB-IBV-99012825/2021, Spain/IB-IBV-99012813/2021, Spain/IB-IBV-99012801/2021, Spain/IB-IBV-99012778/2020, Spain/IB-IBV-99012767/2020, Spain/IB-IBV-99012836/2021, Spain/IB-IBV-99012777/2021, Spain/IB-IBV-99012776/2021,Spain/IB-IBV-99012775/2021, Spain/IB-IBV-99012849/2021, Spain/IB-IBV-99012815/2021, Spain/IB-IBV-99012788/2021, Spain/IB-IBV-99012812/2021, Spain/IB-IBV-99012766/2021, Spain/IB-IBV-99012839/2021), from Madrid collected Dec 24-Jan 7.
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013442/2020 12/14 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013387/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013386/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013385/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013384/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013383/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
Spain/MD-IBV-99013370/2020 12/28 matched B.1.17 with 3 AAs deleted in Spike protein, 3 AAs deleted in NSP6 map update https://www.google.com/maps/d/u/1/edit?mid=1aQDSL2LwQFbuoCAg_nIOPK8D-LIJ5MYd&ll=40.41285185570294%2C-3.8461775483145466&z=9
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Seven UK Variant B.1.1.7 COVID Sequence From Madrid Spain
CSIC has released (at GISAID) 7 UK Variant B.1.1.7 SARS CoV2 sequences, (Spain/MD-IBV-99013370/2020, Spain/MD-IBV-99013383/2020, Spain/MD-IBV-99013384/2020, Spain/MD-IBV-99013385/2020, Spain/MD-IBV-99013386/2020, Spain/MD-IBV-99013387/2020, Spain/MD-IBV-99013442/2020), from Madrid collected Dec 14-28.