Everything posted by niman
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Second BA.2.86 Sequence from Hospital Universitario Central De Asturias Spain
Spain/AS-HUCA-56982/2023 Asturias Hospital Universitario Central De Asturias 9/26/23 collection Spike ins16MPLF NSP3 K1155R BA.2.86.1
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Sixth BA.2.86 Sequence from Bizkaia Spain
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=43.35330671346295%2C-2.955658988281238&z=11
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Sixth BA.2.86 Sequence from Bizkaia Spain
Spain/PV-HUB-50500265/2023 Bizkaia 9/16/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I
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Eighty First BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.7982804453989%2C0.00745538383576605&z=13
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Eighty First BA.2.86 Sequence from England
England/CLIMB-CM7YRZ8W/2023 England 9/23/23 collection Spike V483del NSP3 K1155R BA.2.86.1 NSP2 Y441C T1030C (NSP2)
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Ninety Fifth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.55983264195733%2C-0.6740667025277003&z=13
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Ninety Fifth BA.2.86 Sequence from England
England/CLIMB-CM7Y8AHJ/2023 England 9/28/2023 NSP3 K1155R BA.2.86.1 NSP2 Y441C T1030C (NSP2)
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Seventy Seventh BA.2.86 Sequence from England
collection date 2023-09-25 geographic location United Kingdom host common name not provided host health state not provided host Homo sapiens host sex not provided host subject id not provided isolate not provided sample capture status active surveillance in response to outbreak sample name COG-UK/CLIMB-CM7YKF4X ENA-CHECKLIST ERC000033 INSDC center name Respiratory Virus Unit, Microbiology Services Colindale, Public Health England Submitter Id COG-UK/CLIMB-CM7YKF4X broker name COVID-19 Genomics UK Consortium collecting institution Respiratory Virus Unit, Microbiology Services Colindale, Public Health England collector name not provided definition for seropositive sample not provided geographic location (region and locality) England receipt date 2023-09-25 scientific_name Severe acute respiratory syndrome coronavirus 2 serotype (required for a seropositive sample) not provided virus identifier not provided Submission EBI; 2023-10-03 Accession: SAMEA114462397 ID: 37655664 https://www.ncbi.nlm.nih.gov/biosample/SAMEA114462397
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Seventy Sixth BA.2.86 Sequence from England
collection date 2023-09-22 geographic location United Kingdom host common name not provided host health state not provided host Homo sapiens host sex not provided host subject id not provided isolate not provided sample capture status active surveillance in response to outbreak sample name COG-UK/CLIMB-CM7YFSRA ENA-CHECKLIST ERC000033 INSDC center name Respiratory Virus Unit, Microbiology Services Colindale, Public Health England Submitter Id COG-UK/CLIMB-CM7YFSRA broker name COVID-19 Genomics UK Consortium collecting institution Respiratory Virus Unit, Microbiology Services Colindale, Public Health England collector name not provided definition for seropositive sample not provided geographic location (region and locality) England receipt date 2023-09-26 scientific_name Severe acute respiratory syndrome coronavirus 2 serotype (required for a seropositive sample) not provided virus identifier not provided Submission EBI; 2023-10-03 Accession: SAMEA114462492 ID: 37655326
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Seventy Seventh BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.444357533429255%2C-0.03348049449034218&z=13
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Seventy Seventh BA.2.86 Sequence from England
England/CLIMB-CM7YKF4X/2023 England 9/25/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3) C19524T (NSP14) Spike T572I N T391I
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Seventy Sixth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.393079254075616%2C-0.16930748588867894&z=13
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Seventy Sixth BA.2.86 Sequence from England
England/CLIMB-CM7YFSRA/2023 England 9/22/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3) C19524T (NSP14) Spike T572I N T391I
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Ninety Fourth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.5810493675061%2C-0.6856501784180864&z=14
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Ninety Fourth BA.2.86 Sequence from England
England/CLIMB-CM7YEZQY/2023 England 9/28/23 collection NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3) C19524T (NSP14) Spike T572I N T391I
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Sixty Sixth BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.7645911848783%2C-0.2826077064502215&z=13
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Sixty Sixth BA.2.86 Sequence from England
England/CLIMB-CM7YF6QJ/2023 England 9/18/23 collection date Spike V483del NSP3 K1155R BA.2.86.1 Spike V193L NSP2 R463G
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Ninety Third BA.2.86 Sequence from England
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.618943100593725%2C-0.7118990983271942&z=13
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Ninety Third BA.2.86 Sequence from England
England/CLIMB-CM7YGWSG/2023 England 9/26/23 collection NSP3 K1155R BA.2.86.1 NSP2 R463G Spike V193L
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Seventh BA.2.86 Sequence from South Korea
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=36.64974619088439%2C127.30430537895862&z=13
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Seventh BA.2.86 Sequence from South Korea
South Korea/KDCA265758/2023 South Korea 9/11/23 collection V483del NSP3 K1155R BA.2.86.1
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Sixth BA.2.86 Sequence from South Korea
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=36.63462007283364%2C127.26980144219104&z=13
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Sixth BA.2.86 Sequence from South Korea
South Korea/KDCA265723/2023 South Korea 9/11/23 collection Spike V483del NSP3 K1155R BA.2.86.1
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Fifth BA.2.86 Sequence from South Korea
map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=36.602630295226874%2C127.2836435668457&z=13
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Fifth BA.2.86 Sequence from South Korea
South Korea/KDCA265467/2023 South Korea 9/9/23 collection V483del NSP3 K1155R BA.2.86.1