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Pandemic Potentials Blog

niman

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Everything posted by niman

  1. Virus name: hCoV-19/USA/NY-NYUMC13/2020 Accession ID: EPI_ISL_418198 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-17 Location: North America / USA / New York / Manhattan Host: Human
  2. Virus detail Virus name: hCoV-19/USA/NY-NYUMC12/2020 Accession ID: EPI_ISL_418197 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-15 Location: North America / USA / New York / Manhattan Host: Human
  3. Virus name: hCoV-19/USA/NY-NYUMC11/2020 Accession ID: EPI_ISL_418196 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-14 Location: North America / USA / New York / Manhattan Host: Human
  4. Virus name: hCoV-19/USA/NY-NYUMC10/2020 Accession ID: EPI_ISL_418195 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-17 Location: North America / USA / New York / Manhattan Host: Human
  5. Virus name: hCoV-19/USA/NY-NYUMC9/2020 Accession ID: EPI_ISL_418194 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-17 Location: North America / USA / New York / Manhattan Host: Human
  6. Virus detail Virus name: hCoV-19/USA/NY-NYUMC8/2020 Accession ID: EPI_ISL_418193 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-17 Location: North America / USA / New York / Manhattan Host: Human
  7. Virus name: hCoV-19/USA/NY-NYUMC7/2020 Accession ID: EPI_ISL_418192 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-16 Location: North America / USA / New York / Manhattan Host: Human
  8. Virus name: hCoV-19/USA/NY-NYUMC6/2020 Accession ID: EPI_ISL_418191 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-16 Location: North America / USA / New York / Nassau County Host: Human
  9. Virus name: hCoV-19/USA/NY-NYUMC5/2020 Accession ID: EPI_ISL_418190 Type: betacoronavirus Passage details/history: Original Sample information Collection date: 2020-03-16 Location: North America / USA / New York / Nassau County Host: Human
  10. NYU has release (at GISAID) a set of 16 sequences from Manhattan and Nassau New York COVID patients. All 16 sequences are closely related to each other and sequences from patients in Italy.
  11. Same comments were made for SARS. Coronaviruses recombine frequently and will quickly evolve away from a vaccine.
  12. New York New York City 32,308 Albany County 195 Allegany County 2 Broome County 23 Cattaraugus County 1 Cayuga County 2 Chautauqua County 5 Chemung County 12 Chenango County 8 Clinton County 12 Columbia County 22 Cortland County 5 Delaware County 8 Dutchess County 262 Erie County 318 Essex County 4 Franklin County 4 Fulton County 1 Genesee County 7 Greene County 7 Hamilton County 2 Herkimer County 9 Jefferson County 6 Livingston County 5 Madison County 19 Monroe County 192 Montgomery County 5 Nassau County 5,537 Niagara County 33 Oneida County 23 Onondaga County 129 Ontario County 16 Orange County 1,101 Orleans County 3 Oswego County 7 Otsego County 7 Putnam County 131 Rensselaer County 38 Rockland County 1,896 Saratoga County 96 Schenectady County 72 Schoharie County 5 St. Lawrence County 8 Steuben County 13 Suffolk County 4,138 Sullivan County 72 Tioga County 4 Tompkins County 45 Ulster County 128 Warren County 13 Washington County 6 Wayne County 12 Westchester County 7,875 Wyoming County 7 New York State Total 59,513 New York State Deaths 965 https://www.nbcnewyork.com/news/local/how-many-in-tri-state-have-tested-positive-for-coronavirus-here-are-latest-cases-by-the-numbers/2317721/?_osource=SocialFlowTwt_NYBrand&__twitter_impression=true
  13. COVID-19 Cases in Pennsylvania* Negative Positive Deaths 30,061 3,394 38 * Map, tables and case counts last updated at 12:00 p.m. on 3/29/2020 Positive Cases by Age Range to Date Age Range Percent of Cases 0-4 < 1% 5-12 < 1% 13-18 1% 19-24 10% 25-49 41% 50-64 27% 65+ 19% * Percentages may not total 100% due to rounding Hospitalizations by Age Range to Date Total number of hospitalizations since 3/6/2020: 353 Age Range Percent of Cases 0-4 1% 5-12 0% 13-18 1% 19-24 2% 25-49 21% 50-64 27% 65+ 49% * Percentages may not total 100% due to rounding County Case Counts to Date County Number of Cases Deaths Adams 8 Allegheny 265 2 Armstrong 3 Beaver 28 Berks 68 Blair 3 Bradford 3 Bucks 203 1 Butler 47 2 Cambria 1 Cameron 1 Carbon 9 Centre 22 Chester 137 Clarion 1 Clearfield 2 Columbia 6 Crawford 3 Cumberland 22 1 Dauphin 35 Delaware 276 4 Erie 7 Fayette 10 Franklin 11 Greene 6 Huntingdon 1 Indiana 2 Juniata 1 Lackawanna 56 2 Lancaster 67 2 Lawrence 8 1 Lebanon 19 Lehigh 151 3 Luzerne 94 2 Lycoming 3 Mckean 1 Mercer 7 Mifflin 2 Monroe 135 3 Montgomery 488 5 Montour 4 Northampton 126 4 Northumberland 1 Perry 1 Philadelphia 865 5 Pike 33 1 Potter 2 Schuylkill 21 Snyder 2 Somerset 2 Susquehanna 1 Tioga 1 Venango 1 Warren 1 Washington 24 Wayne 7 Westmoreland 47 York 43 https://www.health.pa.gov/topics/disease/coronavirus/Pages/Cases.aspx
  14. Autauga (6) Baldwin (14) Blount (5) Bullock (3) Butler (1) Calhoun (3) Chambers (24) Cherokee (2) Chilton (7) Choctaw (1) Clay (2) Cleburne (4) Colbert (2) Coosa (2) Covington (2) Crenshaw (1) Cullman (7) Dallas (2) DeKalb (4) Elmore (13) Escambia (1) Etowah (6) Franklin (3) Greene (3) Houston (5) Jackson (5) Jefferson (214) Lamar (1) Lauderdale (12) Lawrence (3) Lee (59) Limestone (16) Lowndes (1) Madison (73) Marengo (4) Marion (9) Marshall (4) Mobile (39) Monroe (1) Montgomery (20) Morgan (17) Pickens (2) Pike (4) Randolph (2) Russell (1) St. Clair (12) Shelby (73) Talladega (4) Tallapoosa (8) Tuscaloosa (23) Walker (29) Washington (3) Wilcox (2) Winston (2) https://alpublichealth.maps.arcgis.com/apps/opsdashboard/index.html#/6d2771faa9da4a2786a509d82c8cf0f7
  15. Number of Positive Results by County Wisconsin County Total Cases as of 3/28/2020 Total Deaths as of 3/28/2020 Bayfield 2 0 Brown 6 0 Calumet 1 0 Chippewa 4 0 Clark 3 0 Columbia 7 0 Dane 158 1 Dodge 6 0 Douglas 6 0 Dunn 2 0 Eau Claire 7 0 Fond du Lac 20 1 Grant 1 0 Green 4 0 Iowa 3 0 Iron 1 1 Jefferson 8 0 Juneau 2 0 Kenosha 24 0 La Crosse 15 0 Marathon 1 0 Marinette 1 0 Milwaukee 489 5 Monroe 1 0 Oneida 1 0 Outagamie 4 0 Ozaukee 33 3 Pierce 4 0 Portage 1 0 Racine 16 0 Richland 2 0 Rock 12 0 Sauk 11 1 Sheboygan 8 0 St. Croix 4 0 Vilas 2 0 Walworth 6 0 Washington 31 0 Waukesha 72 0 Waupaca 1 1 Winnebago 7 0 Wood 2 0 Total 989 13 https://www.dhs.wisconsin.gov/covid-19/data.htm Last Revised: March 27, 2020
  16. https://app.powerbigov.us/view?r=eyJrIjoiMjA2ZThiOWUtM2FlNS00MGY5LWFmYjUtNmQwNTQ3Nzg5N2I2IiwidCI6ImU0YTM0MGU2LWI4OWUtNGU2OC04ZWFhLTE1NDRkMjcwMzk4MCJ9
  17. 2,329 confirmed coronavirus cases, 30 deaths in Texas. We are tracking cases of coronavirus disease using data collected from the Centers for Disease Control and Prevention and state and local public health departments and our own reporting. https://www.houstonchronicle.com/coronavirus/article/texas-coronavirus-map-cases-houston-covid-19-15137466.php
  18. Confirmed Cases / Deaths by County County Positive/Confirmed Cases Deaths Adams 5 0 Benton 56 5 Chelan 13 1 Clallam 5 0 Clark 82 6 Columbia 1 0 Cowlitz 10 0 Douglas 5 0 Ferry 1 0 Franklin 16 0 Grant 44 1 Grays Harbor 1 0 Island 92 1 Jefferson 13 0 King 2077 136 Kitsap 49 0 Kittitas 8 0 Klickitat 7 0 Lewis 7 0 Lincoln 1 0 Mason 2 0 Okanogan 3 0 Pierce 282 5 San Juan 4 0 Skagit 97 3 Skamania 1 0 Snohomish 912 23 Spokane 108 2 Stevens 3 0 Thurston 33 0 Walla Walla 4 0 Whatcom 102 4 Whitman 6 0 Yakima 100 2 Unassigned 160 Total 4300 189 Number of Individuals Tested Result Number of Individuals Tested Percent of Tests Negative 54,896 93% Positive 4,300 7% Confirmed Cases / Deaths by Age Age Group Percent of Cases Percent of Deaths <19 2% 0% 20-29 10% 0% 30-39 15% 0% 40-49 14% 1% 50-59 18% 6% 60-69 16% 12% 70-79 12% 27% 80+ 12% 55% Confirmed Cases / Deaths by Gender Sex at Birth Percent of Cases Percent of Deaths Female 51% 51% Male 46% 48% Unknown 3% 1% Note on the county and unassigned data: This data changes rapidly as labs conduct tests and discover new cases. Labs assign those cases to a county. Counties or the Department of Health then determine the appropriate county of jurisdiction. Those don’t always match initially. We’re working to reduce the “unassigned” number to 0. Contact the local health department for county specific information. Note on the deaths: Some deaths may be reported by health care providers, medical examiners/coroners, local health departments, or others before they are included in the statewide count. It takes longer for the state to announce deaths because they are often reported first to the local health department and then to us. Note on the number of infections: Public health experts agree that the true number of people who have been infected with COVID-19 in Washington greatly exceeds the number of COVID-19 infections that have been laboratory-confirmed. It is very difficult to know exactly how many people in Washington have been infected to date since most people with COVID-19 experience mild illness and the ability to get tested is still not widely available. https://www.doh.wa.gov/Emergencies/Coronavirus
  19. As of March 28, 2020 Confirmed Cases Reported =4257 CATEGORY NUMBER OF CONFIRMED CASES County Barnstable 133 Berkshire 119 Bristol 179 Dukes and Nantucket 8 Essex 472 Franklin 39 Hampden 183 Hampshire 30 Middlesex 842 Norfolk 490 Plymouth 272 Suffolk 843 Worcester 291 Unknown 356 Sex Female 2157 Male 2067 Unknown 33 Age Group ≤19 years of age 83 20-29 years of age 723 30-39 years of age 752 40-49 years of age 690 50-59 years of age 812 60-69 years of age 588 ≥ 70 years of age 602 Unknown 7 Deaths Attributed to COVID-19 44 Key Updates  More than 35,000 individuals have been tested, up from 29371.  There are 1017 new cases for a total of 4257.  9 new deaths were reported for a total of 44. include:  Female, 60s, Essex county, preexisting conditions, hospitalized  Female, 80s, Suffolk county, preexisting conditions, hospitalized  Male, 80s, Worcester county, preexisting conditions, hospitalized  Female, 80s, Norfolk county, unknown preexisting conditions, hospitalization unknown  Male, 70s, Hampden county, preexisting conditions, hospitalized  Male, 80s, Hampden county, preexisting conditions, not hospitalized  Male, 80s, Norfolk county, unknown preexisting conditions, hospitalization unknown  Female, 50s, Worcester county, unknown preexisting condition, hospitalized  Female, 90s, Hampden county, unknown preexisting condition, hospitalization unknown MASSACHUSETTS DEPARTMENT OF PUBLIC HEALTH These data are cumulative and current as of March 28, 2020 at 12:30PM. PLEASE NOTE: Now that COVID-19 cases have been seen in all 14 counties in Mass, and the great majority of new cases have unknown exposure, we are no longer reporting daily on Exposures. Data are cumulative and current as of March 28, 2020 at 12:30PM. *Other commercial and clinical laboratories continue to come on line. As laboratory testing results are processed and the source verified, they will be integrated into this daily report Hospitalization Patient was hospitalized 350 Patient was not hospitalized 1226 Under Investigation 2681 https://www.mass.gov/doc/covid-19-cases-in-massachusetts-as-of-march-28-2020/download
  20. COVID-19 Confirmed Cases:No. Cases (%)Total2366 (100%)Hospitalized617(26.08%)Deaths69 (2.92%) https://dph.georgia.gov/covid-19-daily-status-report
  21. https://www.latimes.com/projects/california-coronavirus-cases-tracking-outbreak/
  22. Updated as of 3/28/2020 4:33 p.m. Confirmed Cases of COVID-19 in Arkansas 409 Arkansas Department of Health Lab positive test results 95 Commercial Lab positive test results 141 These data are updated four times a day: Once in the morning, once at mid-day, once in the afternoon, and once in the evening. Click the Status Update Button Below for More Detailed Information Updated as of 3/28/2020, 4:05pm Currently Hospitalized 48 Currently on Ventilator 17 Total Nursing Home Residents 42 Gender Male = 39.1% Female = 60.9% Age 0-18: 15 19-64: 259 65+: 130 Positive Cases of COVID-19 in Arkansas ADH has activated a call center to answer questions from health care providers and the public about the novel coronavirus. During normal business hours (8:00am – 4:30pm), urgent and non-urgent calls, please call 1-800-803-7847 or email [email protected]. After normal business hours and weekend calls, needing immediate response, please call 1-800-554-5738. Arkansas Totals Cumulative Cases 409 Last update: a few seconds ago Recoveries 26 Last update: a few seconds ago Deaths 5 Last update: a few seconds ago United States Totals Cumulative Cases 119,748 Last update: a few seconds ago Recoveries 921 Last update: a few seconds ago Deaths 1,991 https://adem.maps.arcgis.com/apps/opsdashboard/index.html#/f533ac8a8b6040e5896b05b47b17a647

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