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Full Zika Sequence Shenzhen ex-American Samoa - Mosquito Culture


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Posted (edited)

Wuhan Institute released full Zika sequence of Shenzhen ex-American Samoa, SZ-WIV01, grown in mosquito cell line.

Edited by niman
Posted
LOCUS       KU963796               10709 bp    RNA     linear   VRL 05-APR-2016
DEFINITION  Zika virus isolate SZ-WIV01 polyprotein gene, complete cds.
ACCESSION   KU963796
VERSION     KU963796.1  GI:1009327546
KEYWORDS    .
SOURCE      Zika virus
  ORGANISM  Zika virus
            Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA
            stage; Flaviviridae; Flavivirus.
REFERENCE   1  (bases 1 to 10709)
  AUTHORS   Deng,C.-L., Liu,S.-Q., Zhang,Q.-Y., Xu,M.-Y., Zhang,H.-L.,
            Gu,D.-Y., Shi,L., He,J.-A., Xiao,G.-F. and Zhang,B.
  TITLE     Isolation and characterization of Zika virus imported to China in
            C6/36 mosquito cells
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10709)
  AUTHORS   Deng,C.-L., Liu,S.-Q., Zhang,Q.-Y., Xu,M.-Y., Zhang,H.-L.,
            Gu,D.-Y., Shi,L., He,J.-A., Xiao,G.-F. and Zhang,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAR-2016) Key Laboratory of Special Pathogens and
            Biosafety, Center for Emerging Infectious Diseases, Wuhan Institute
            of Virology, Chinese Academy of Sciences, Xiao Hong Shan Zhong Qu
            44, Wuhan, Hubei 430071, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: DNAStar v. 7.0
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..10709
                     /organism="Zika virus"
                     /mol_type="genomic RNA"
                     /isolate="SZ-WIV01"
                     /isolation_source="serum"
                     /host="Homo sapiens"
                     /culture_collection="CCGVCC:IVCAS 6.6110"
                     /db_xref="taxon:64320"
                     /country="China: Shenzhen"
                     /collection_date="2016"
                     /note="imported from American Samoa;
                     genotype: Asian"
     CDS             59..10330
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="AMR68932.1"
                     /db_xref="GI:1009327547"
                     /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPI
                     RMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKK
                     RRGADTNVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQI
                     MDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVT
                     LPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKV
                     IYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIE
                     LVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWG
                     NGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
                     DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWF
                     HDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAE
                     MDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAG
                     TDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVG
                     EKKITHHWHRSGSTIGKAFEATVRGARRMAVLGDTAWDFGSVGGALNSLGKGIHQIFG
                     AAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGC
                     SVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSR
                     MENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK
                     SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLE
                     CDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGI
                     EESDLIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTR
                     GPSLRSTTASGRVIEEWCCRECTMPPLSFQAKDGCWYGMEIRPRKEPESNLVRSMVTA
                     GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLA
                     ILMGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQT
                     AISALEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGL
                     ATCGGFMLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSE
                     VLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKD
                     AEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGAWY
                     VYVKTGKRSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMW
                     HVTKGSALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARN
                     IQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAIT
                     QGRREEETPVECFEPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAP
                     TRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLY
                     IMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
                     PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKT
                     KHQEWDFVVTTDISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQR
                     RGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEARMLLDNIYLQDGLIASLYRPEADK
                     VAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIM
                     EDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKRGAAFGVMEALGTL
                     PGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGLLGTVSLGIFFV
                     LMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLIPEPEKQRSP
                     QDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPA
                     SAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPL
                     LMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIV
                     VTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEAGALITAATSTLWEGSP
                     NKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGGTGETLGEKWKARLNQ
                     MSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKLRWLVERGYLQPYGK
                     VIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGWNIVRLKSGVDVFH
                     MAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFCIKVLCPYTSTMM
                     ETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLLLGRMDGPRRP
                     VKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHPYRTWAYHG
                     SYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKVDTRVPD
                     PQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEWKTAV
                     EAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWLGA
                     RFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD
                     TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQ
                     DQRGSGQVVTYALNTFTNLVVQLIRSMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDR
                     LKRMAVSGDDCVVRPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHH
                     FNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRR
                     DLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKT
                     PVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST
                     QVRYLGEEGSTPGVL"
ORIGIN      
        1 aagctagcaa cagtatcaac aggttttatt ttggatttgg aaacgagagt ttctggtcat
       61 gaaaaaccca aaaaagaaat ccggaggatt ccggattgtc aatatgctaa aacgcggagt
      121 agcccgtgtg agcccctttg ggggcttgaa gaggctgcca gccggacttc tgctgggtca
      181 tgggcccatc aggatggtct tggcgattct agccttcttg agattcacgg caatcaagcc
      241 atcactgggt ctcatcaata gatggggttc agtggggaaa aaagaggcta tggaaataat
      301 aaagaagttc aagaaagatc tggctgccat gctgagaata atcaatgcta ggaaggagaa
      361 gaagagacga ggcgcagata ctaatgtcgg aattgttggc ctcctgctga ccacagctat
      421 ggcagcggag gtcactagac gtgggagtgc atactatatg tacttggaca gaaacgatgc
      481 tggggaggcc atatcttttc caaccacatt ggggatgaat aagtgttata tacagatcat
      541 ggatcttgga cacatgtgtg atgccaccat gagctatgaa tgccctatgc tggatgaggg
      601 ggtggaacca gatgacgtcg attgttggtg caacacgacg tcaacttggg ttgtgtacgg
      661 aacctgccat cacaaaaaag gtgaagcacg gagatctaga agagctgtga cgctcccctc
      721 ccattccact aggaagctgc aaacgcggtc gcaaacttgg ttggaatcaa gagaatacac
      781 aaagcacttg attagagtcg aaaattggat attcaggaac cctggcttcg cgttagcagc
      841 agctgccatc gcttggcttt tgggaagctc aacgagccaa aaagtcatat acttggtcat
      901 gatactgctg attgccccgg catacagcat caggtgcata ggagtcagca atagggactt
      961 tgtggaaggt atgtcaggtg ggacttgggt tgatgttgtc ttggaacatg gaggttgtgt
     1021 caccgtaatg gcacaggaca aaccgactgt cgacatagag ctggttacaa caacagtcag
     1081 caacatggcg gaggtaagat cctactgcta tgaggcatca atatcggaca tggcttcgga
     1141 cagccgctgc ccaacacaag gtgaagccta ccttgacaag caatcagaca ctcaatatgt
     1201 ctgcaaaaga acgttagtgg acagaggctg gggaaatgga tgtggacttt ttggcaaagg
     1261 gagcctggtg acatgcgcta agtttgcatg ctccaagaaa atgaccggga agagcatcca
     1321 gccagagaat ctggagtacc ggataatgct gtcagttcat ggctcccagc acagtgggat
     1381 gatcgttaat gacacaggac atgaaactga tgagaataga gcgaaggttg agataacgcc
     1441 caattcacca agagccgaag ccaccctggg gggttttgga agcctaggac ttgattgtga
     1501 accgaggaca ggccttgact tttcagattt gtattacttg actatgaata acaagcactg
     1561 gttggttcac aaggagtggt tccacgacat tccattacct tggcacgctg gggcagacac
     1621 cggaactcca cactggaaca acaaagaagc actggtagag ttcaaggacg cacatgccaa
     1681 aaggcaaact gtcgtggttc tagggagtca agaaggagca gttcacacgg cccttgctgg
     1741 agctctggag gctgagatgg atggtgcaaa gggaaggctg tcctctggcc acttgaaatg
     1801 tcgcctgaaa atggataaac ttagattgaa gggcgtgtca tactccttgt gtaccgcagc
     1861 gttcacattc accaagatcc cggctgaaac actgcacggg acagtcacag tggaggtaca
     1921 gtacgcaggg acagatggac cttgcaaggt tccagctcag atggcggtgg acatgcaaac
     1981 tctgacccca gttgggaggc tgataaccgc taaccccgta atcactgaaa gcactgagaa
     2041 ctccaagatg atgctggaac ttgatccacc atttggggac tcttacattg tcataggagt
     2101 cggggagaag aagatcaccc accactggca caggagtggc agcaccattg gaaaagcatt
     2161 tgaagccact gtgagaggtg ccaggagaat ggcagtcttg ggagacacag cctgggactt
     2221 tggatcagtt ggaggcgctc tcaactcatt gggcaagggc atccatcaaa tttttggagc
     2281 agctttcaaa tcattgtttg gaggaatgtc ctggttctca caaattctca ttggaacgtt
     2341 gctgatgtgg ttgggtctga acacaaagaa tggatctatt tcccttatgt gcttggcctt
     2401 agggggagtg ttgatcttct tatccacagc cgtctctgct gatgtggggt gctcggtgga
     2461 cttctcaaag aaggagacga gatgcggtac aggggtgttc gtctataacg acgttgaagc
     2521 ctggagggac aggtacaagt accatcctga ctccccccgt agattggcag cagcagtcaa
     2581 gcaagcctgg gaagatggta tctgtgggat ctcctctgtt tcaagaatgg aaaacatcat
     2641 gtggagatca gtagaagggg agctcaacgc aatcctggaa gagaatggag ttcaactgac
     2701 ggtcgttgtg ggatctgtaa aaaaccccat gtggagaggt ccacagagat tgcccgtgcc
     2761 tgtgaacgag ctgccccacg gctggaaggc ttgggggaaa tcgtacttcg tcagagcagc
     2821 aaagacaaat aacagctttg tcgtggatgg tgacacactg aaggaatgcc cactcaaaca
     2881 tagagcatgg aacagctttc ttgtggagga tcatgggttc ggggtatttc acactagtgt
     2941 ctggctcaag gttagagaag attattcatt agagtgtgat ccagccgtta ttggaacagc
     3001 tgttaaggga aaggaggctg tacacagtga tctaggctac tggattgaga gtgagaagaa
     3061 tgacacatgg aggctgaaga gggcccatct gatcgagatg aaaacatgtg aatggccaaa
     3121 gtcccacaca ttgtggacag atggaataga agagagtgat ctgatcatac ccaagtcttt
     3181 agctgggcca ctcagccatc acaataccag agagggctac aggacccaaa tgaaagggcc
     3241 atggcacagt gaagagcttg aaattcggtt tgaggaatgc ccaggcacca aggtccacgt
     3301 ggaggaaaca tgtggaacaa gaggaccatc tctgagatca accactgcaa gcggaagggt
     3361 gatcgaggaa tggtgctgca gggagtgcac aatgccccca ctgtcgttcc aggctaaaga
     3421 tggctgttgg tatggaatgg agataaggcc caggaaagaa ccagaaagta acttagtaag
     3481 gtcaatggtg actgcaggat caactgatca catggatcac ttctcccttg gagtgcttgt
     3541 gattctgctc atggtgcagg aagggctgaa gaagagaatg accacaaaga tcatcataag
     3601 cacatcaatg gcagtgctgg tagctatgat cctgggagga ttttcaatga gtgacctggc
     3661 taagcttgca attttgatgg gtgccacctt cgcggaaatg aacactggag gagatgtagc
     3721 tcatctggcg ctgatagcgg cattcaaagt cagaccagcg ttgctggtat ctttcatctt
     3781 cagagctaat tggacacccc gtgaaagcat gctgctggcc ttggcctcgt gtcttttgca
     3841 aactgcgatc tccgccttgg aaggcgacct gatggttctc atcaatggtt ttgctttggc
     3901 ctggttggca atacgagcga tggttgttcc acgcactgat aacatcacct tggcaatcct
     3961 ggctgctctg acaccactgg cccggggcac actgcttgtg gcgtggagag caggccttgc
     4021 tacttgcggg gggtttatgc tcctctctct gaagggaaaa ggcagtgtga agaagaactt
     4081 accatttgtc atggccctgg gactaaccgc tgtgaggctg gtcgacccca tcaacgtggt
     4141 gggactgctg ttgctcacaa ggagtgggaa gcggagctgg ccccctagcg aagtactcac
     4201 agctgttggc ctgatatgcg cattggctgg agggttcgcc aaggcagata tagagatggc
     4261 tgggcccatg gccgcggtcg gtctgctaat tgtcagttac gtggtctcag gaaagagtgt
     4321 ggacatgtac attgaaagag caggtgacat cacatgggaa aaagatgcgg aagtcactgg
     4381 aaacagtccc cggcttgatg tggcgctaga tgagagtggt gatttctccc tggtggagga
     4441 tgacggtccc cccatgagag agatcatact caaggtggtc ctgatgacca tctgtggcat
     4501 gaacccaata gccataccct ttgcagctgg agcgtggtac gtatacgtga agactggaaa
     4561 aaggagtgga gctctatggg atgtgcctgc tcccaaggaa gtaaaaaagg gggagaccac
     4621 agatggagtg tacagagtga tgactcgtag actgctaggt tcaacacaag ttggagtggg
     4681 agttatgcaa gagggggtct ttcacaccat gtggcacgtc acaaaaggat ccgcgctgag
     4741 aagcggtgaa gggagacttg atccatactg gggagatgtc aagcaggatc tggtgtcata
     4801 ctgtggtcca tggaagctag atgccgcctg ggacgggcac agcgaggtgc agctcttggc
     4861 cgtgcccccc ggagagagag cgaggaacat ccagactctg cccggaatat ttaagacaaa
     4921 ggatggggac attggagcgg ttgcgctgga ttacccagca ggaacttcag gatctccaat
     4981 cctagacaag tgtgggagag tgataggact ttatggcaat ggggtcgtga tcaaaaatgg
     5041 gagttatgtt agtgccatca cccaagggag gagggaggaa gagactcctg ttgagtgctt
     5101 cgagccttcg atgctgaaga agaagcagct aactgtctta gacttgcatc ctggagctgg
     5161 gaaaaccagg agagttcttc ctgaaatagt ccgtgaagcc ataaaaacaa gactccgtac
     5221 tgtgatctta gctccaacca gggttgtcgc tgccgaaatg gaggaagccc ttagagggct
     5281 tccagtgcgt tatatgacaa cagcagtcaa tgtcacccac tctggaacag aaatcgtcga
     5341 cttaatgtgc catgccacct tcacttcacg tctactacag ccaatcagag tccccaacta
     5401 taatctgtat attatggatg aggcccactt cacagatccc tcaagtatag cagcaagagg
     5461 atacatttca acaagggttg agatgggcga ggcggctgcc atcttcatga ccgccacgcc
     5521 accaggaacc cgtgacgcat ttccggactc caactcacca attatggaca ccgaagtgga
     5581 agtcccagag agagcctgga gctcaggctt tgattgggtg acggatcatt ctggaaaaac
     5641 agtctggttt gttccaagcg tgaggaacgg caatgagatc gcagcttgtc tgacaaaggc
     5701 tggaaaacgg gtcatacagc tcagcagaaa gacttttgag acagagttcc agaaaacaaa
     5761 acatcaagag tgggactttg tcgtgacaac tgacatttca gagatgggcg ccaactttaa
     5821 agctgaccgt gtcatagatt ccaggagatg cctaaagccg gtcatacttg atggcgagag
     5881 agtcattctg gctggaccca tgcctgtcac acatgccagc gctgcccaga ggagggggcg
     5941 cataggcagg aatcccaaca aacctggaga tgagtatctg tatggaggtg ggtgcgcaga
     6001 gactgacgaa gaccatgcac actggcttga agcaagaatg ctccttgaca atatttacct
     6061 ccaagatggc ctcatagcct cgctctatcg acctgaggcc gacaaagtag cagccattga
     6121 gggagagttc aagcttagga cggagcaaag gaagaccttt gtggaactca tgaaaagagg
     6181 agatcttcct gtttggctgg cctatcaggt tgcatctgcc ggaataacct acacagatag
     6241 aagatggtgc tttgatggca cgaccaacaa caccataatg gaagacagtg tgccggcaga
     6301 ggtgtggacc agacacggag agaaaagagt gctcaaaccg aggtggatgg acgccagagt
     6361 ttgttcagat cacgcggccc tgaagtcatt caaggagttt gccgctggga aaagaggagc
     6421 ggcttttgga gtgatggaag ccttgggaac actgccagga cacatgacag agagattcca
     6481 ggaagccatt gacaacctcg ctgtgctcat gcgggcagag actggaagca ggccttacaa
     6541 agccgcggcg gcccaattgc cggagaccct agagaccatt atgcttttgg ggttgctggg
     6601 aacagtctcg ctgggaatct ttttcgtctt gatgaggaac aagggcatag ggaagatggg
     6661 ctttggaatg gtgactcttg gggccagcgc atggctcatg tggctctcgg aaattgagcc
     6721 agccagaatt gcatgtgtcc tcattgttgt gttcctattg ctggtggtgc tcatacctga
     6781 gccagaaaag caaagatctc cccaggacaa ccaaatggca atcatcatca tggtagcagt
     6841 aggtcttctg ggcttgatta ccgccaatga actcggatgg ttggagagaa caaagagtga
     6901 cctaagccat ctaatgggaa ggagagagga gggggcaacc ataggattct caatggacat
     6961 tgacctgcgg ccagcctcag cttgggccat ctacgctgcc ttgacaactt tcattacccc
     7021 agccgtccaa catgcagtga ccacttcata caacaactac tccttaatgg cgatggccac
     7081 gcaagctgga gtgttgtttg gtatgggcaa agggatgcca ttctacgcat gggactttgg
     7141 agtcccgctg ctaatgatag gttgctactc acaattaaca cccctgaccc taatagtagc
     7201 catcattttg ctcgtggcgc actacatgta cttgatccca gggctgcagg cagcagctgc
     7261 gcgtgctgcc cagaagagaa cggcagctgg catcatgaag aaccctgttg tggatggaat
     7321 agtggtgact gacattgaca caatgacaat tgacccccaa gtggagaaaa agatgggaca
     7381 ggtgctactc atagcagtag ccgtctccag cgccatactg tcgcggaccg cctgggggtg
     7441 gggggaggct ggggccctga tcacagctgc aacttccact ttgtgggaag gctctccgaa
     7501 caagtactgg aactcctcta cagccacttc actgtgtaac atttttaggg gaagttactt
     7561 ggctggagct tctctaatct acacagtaac aagaaacgct ggcttggtca agagacgtgg
     7621 gggtggaaca ggagagaccc tgggagagaa atggaaggcc cgcttgaacc agatgtcggc
     7681 cctggagttc tactcctaca aaaagtcagg catcaccgag gtgtgcagag aagaggcccg
     7741 ccgcgccctc aaggacggtg tggcaacggg aggccatgct gtgtcccgag gaagtgcaaa
     7801 gctgagatgg ttggtggagc ggggatacct gcagccctat ggaaaggtca ttgatcttgg
     7861 atgtggcaga gggggctgga gttactacgc cgccaccatc cgcaaagttc aagaagtgaa
     7921 aggatacaca aaaggaggcc ctggtcatga agaacccatg ttggtgcaaa gctatgggtg
     7981 gaacatagtc cgtcttaaga gtggggtgga cgtctttcat atggcggctg agccgtgtga
     8041 cacgttgctg tgtgacatag gtgagtcatc atctagtcct gaagtggaag aagcacggac
     8101 gctcagagtc ctttccatgg tgggggattg gcttgaaaaa agaccaggag ccttttgtat
     8161 aaaagtgttg tgcccataca ccagcactat gatggaaacc ctggagcgac tgcagcgtag
     8221 gtatggggga ggactggtca gagtgccact ctcccgcaac tctacacatg agatgtactg
     8281 ggtctctgga gcgaaaagca acaccataaa aagtgtgtcc accacgagcc agctcctctt
     8341 ggggcgcatg gacgggccca ggaggccagt gaaatatgag gaggatgtga atctcggctc
     8401 tggcacgcgg gctgtggtaa gctgcgctga agctcccaac atgaagatca ttggtaaccg
     8461 cattgaaagg atccgcagtg agcacgcgga aacgtggttc tttgacgaga accacccata
     8521 taggacatgg gcttaccatg gaagctatga ggcccccaca caagggtcag cgtcctctct
     8581 aataaacggg gttgtcaggc tcctgtcaaa accctgggat gtggtgactg gagtcacagg
     8641 aatagccatg accgacacca caccgtatgg tcagcaaaga gttttcaagg aaaaagtgga
     8701 cactagggtg ccagatcccc aagaaggcac tcgtcaggtt atgagcatgg tctcttcctg
     8761 gttgtggaaa gagctaggca aacacaaacg gccacgagtc tgtaccaaag aagagttcat
     8821 caacaaggtt cgtagcaatg cagcattagg ggcaatattt gaagaggaaa aagagtggaa
     8881 gactgcagtg gaagctgtga acgatccaag gttctgggct ctagtggaca aggaaagaga
     8941 gcaccacctg agaggagagt gccagagttg tgtgtacaac atgatgggaa aaagagaaaa
     9001 gaaacaaggg gaatttggaa aggccaaggg cagccgcgcc atctggtata tgtggctagg
     9061 ggctagattt ctagagttcg aagcccttgg attcttgaac gaggatcact ggatggggag
     9121 agagaactca ggaggtggtg ttgaagggct gggattacaa agactcggat atgtcctaga
     9181 agagatgagt cgcataccag gaggaaggat gtatgcagat gacactgctg gctgggacac
     9241 ccgcatcagc aggtttgatc tggagaatga agctctaatc accaaccaaa tggagaaagg
     9301 gcacagggcc ttggcattgg ccataatcaa gtacacatac caaaacaaag tggtaaaggt
     9361 ccttagacca gctgaaaaag ggaagacagt tatggacatt atttcgagac aagaccaaag
     9421 ggggagcgga caagttgtca cttacgctct taacacattt accaacctag tggtgcaact
     9481 cattcggagt atggaggctg aggaagttct agagatgcaa gacttgtggc tgctgcggag
     9541 gtcagagaaa gtgaccaact ggctgcagag caacggatgg gataggctca aacgaatggc
     9601 agtcagtgga gatgattgcg ttgtgaggcc aattgatgat aggtttgcac atgccctcag
     9661 gttcttgaat gatatgggga aagttaggaa ggacacacaa gagtggaaac cctcaactgg
     9721 atgggacaac tgggaggaag ttccgttttg ctcccaccac ttcaacaagc tccatctcaa
     9781 ggacgggagg tccattgtgg ttccctgccg ccaccaagat gaactgattg gccgggcccg
     9841 cgtctctcca ggggcgggat ggagcatccg ggagactgct tgcctagcaa aatcatatgc
     9901 gcaaatgtgg cagctccttt atttccacag aagggacctc cgactgatgg ccaatgccat
     9961 ttgttcatct gtgccagttg actgggttcc aactgggaga actacctggt caatccatgg
    10021 aaagggagaa tggatgacca ctgaagacat gcttgtggtg tggaacagag tgtggattga
    10081 ggagaacgac cacatggaag acaagacccc agttacgaaa tggacagaca ttccctattt
    10141 gggaaaaagg gaagacttgt ggtgtggatc tctcataggg cacagaccgc gcaccacctg
    10201 ggctgagaac attaaaaaca cagtcaacat ggtgcgcagg atcataggtg atgaagaaaa
    10261 gtacatggac tacctatcca cccaagttcg ctacttgggt gaagaagggt ctacacctgg
    10321 agtgctgtaa gcaccaactt tagtgttgtc aggcctgcta gtcagccaca gcttggggaa
    10381 agctgtgcag cctgtgaccc ccccaggaga agctgggaaa ccaagcctat agtcaggccg
    10441 agaacgccat ggcacggaag aagccatgct gcctgtgagc ccctcagagg acactgagtc
    10501 aaaaaacccc acgcgcttgg aggcgcagga tgggaaaaga aggtggcgac cttccccacc
    10561 cttcaatctg gggcctgaac tggagatcag ctgtggatct ccagaagagg gactagtggt
    10621 tagaggagac cccccggaaa acgcaaaaca gcatattgac gctgggaaag accagagact
    10681 ccatgagttt ccaccacgct ggccgccag
Posted
Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1852018520100%0.099%KU955589.1
1852018520100%0.099%KU820899.2
1839318393100%0.099%KU866423.1
1839318393100%0.099%KJ776791.1
1834818348100%0.099%KU509998.2
1832718327100%0.099%KU991811.1
1832718327100%0.099%KU321639.1
1831818318100%0.099%KU729218.1
1831818318100%0.099%KU707826.1
1831818318100%0.099%KU365779.1
1830318303100%0.099%KU926309.1
1830318303100%0.099%KU501217.1
1830318303100%0.099%KU365780.1
1830018300100%0.099%KU940228.1
1830018300100%0.099%KU647676.1
1830018300100%0.099%KU501216.1
1830018300100%0.099%KU365777.1
1829118291100%0.099%KU729217.2
182911829199%0.099%KU497555.1
1829118291100%0.099%KU527068.1
1828518285100%0.099%KU820897.1
1828518285100%0.099%KU365778.1
1828518285100%0.099%KU312312.1
1828218282100%0.099%KU922960.1
1827618276100%0.099%KU926310.1
1827618276100%0.099%KU922923.1
1827618276100%0.099%KU501215.1
1827318273100%0.099%KU870645.1
1826718267100%0.099%KU853013.1
1826718267100%0.099%KU853012.1
1825818258100%0.099%KU820898.1
1825818258100%0.099%KU740184.2
1825818258100%0.099%KU761564.1
1825418254100%0.099%KU955590.1
182041820499%0.099%KU940224.1
1811018110100%0.099%KU744693.1
1805618056100%0.099%KU681081.3
1775917759100%0.098%KU955593.1
177571775799%0.098%JN860885.1
176941769498%0.099%KF993678.1
1761217612100%0.098%EU545988.1
1744717447100%0.098%KU681082.3
164381643899%0.096%HQ234499.1
1328113281100%0.089%KU720415.1
1327513275100%0.089%KF383115.1
132751327599%0.089%HQ234498.1
1327013270100%0.089%KF268949.1
1327013270100%0.089%DQ859059.1
1326813268100%0.089%KU955595.1
1326313263100%0.089%KF383119.1
1325913259100%0.089%KU955592.1
1325913259100%0.089%LC002520.1
1325213252100%0.089%KF268948.1
1324513245100%0.089%KF268950.1
1324313243100%0.089%KU963573.1
1324313243100%0.089%KU955594.1
1324113241100%0.089%KU955591.1
132181321899%0.089%HQ234501.1
1321613216100%0.089%KF383116.1
1320013200100%0.089%AY632535.2
1314613146100%0.088%KF383117.1
1312613228100%0.088%KU963574.1
131261312699%0.088%HQ234500.1
1294513013100%0.088%KF383118.1
128611286197%0.089%KF383121.1
108621086297%0.084%KF383120.1
50341439987%0.095%KU940227.1
4962496227%0.099%KU312314.1
4935493527%0.099%KU312313.1
4637463725%0.099%KU646828.1
4628462825%0.099%KU646827.1
3431343118%0.099%KU312315.1
3202320217%0.099%KU740199.1
2850419195%0.071%DQ859064.1
2695269514%0.099%KJ634273.1
2042204211%0.099%KU686218.1
2008200811%0.099%KU179098.1
173717379%0.099%KM078936.1
173617369%0.099%KM078961.1
173417349%0.099%KM078930.1
173017309%0.099%KM078971.1
173017309%0.099%KM078970.1
173017309%0.099%KM078933.1
172817289%0.099%KM078929.1
158815888%0.099%KJ873160.1
140614067%0.099%KJ873161.1
137013707%0.098%KM851039.1
133313337%0.097%KM851038.1
133013307%0.099%KU985087.1
132413247%0.099%KU556802.1
1283128310%0.088%AF013415.1
123612366%0.099%KT200609.1
121612166%0.099%KU232300.1
120712076%0.099%KU232290.1
120512056%0.099%KU232297.1
119811986%0.099%KU232294.1
119511956%0.099%KU232292.1
119111916%0.099%KU232298.1
118911896%0.099%KU232293.1
118711876%0.099%KU232296.1
Posted
Sequences producing significant alignments:

Select:AllNone Selected:0

Sequences producing significant alignments:
Select for downloading or viewing reportsDescriptionMax scoreTotal scoreQuery coverE valueIdentAccession
1852518525100%0.0100%KU963796.1
1852018520100%0.099%KU955589.1
1852018520100%0.099%KU820899.2
1839318393100%0.099%KU866423.1
1839318393100%0.099%KJ776791.1
1834818348100%0.099%KU509998.2
1832718327100%0.099%KU991811.1
1832718327100%0.099%KU321639.1
1831818318100%0.099%KU729218.1
1831818318100%0.099%KU707826.1
1831818318100%0.099%KU365779.1
1830318303100%0.099%KU926309.1
1830318303100%0.099%KU501217.1
1830318303100%0.099%KU365780.1
1830018300100%0.099%KU940228.1
1830018300100%0.099%KU647676.1
1830018300100%0.099%KU501216.1
1830018300100%0.099%KU365777.1
1829118291100%0.099%KU729217.2
182911829199%0.099%KU497555.1
1829118291100%0.099%KU527068.1
1828518285100%0.099%KU820897.1
1828518285100%0.099%KU365778.1
1828518285100%0.099%KU312312.1
1828218282100%0.099%KU922960.1
1827618276100%0.099%KU926310.1
1827618276100%0.099%KU922923.1
1827618276100%0.099%KU501215.1
1827318273100%0.099%KU870645.1
1826718267100%0.099%KU853013.1
1826718267100%0.099%KU853012.1
1825818258100%0.099%KU820898.1
1825818258100%0.099%KU740184.2
1825818258100%0.099%KU761564.1
1825418254100%0.099%KU955590.1
182041820499%0.099%KU940224.1
1811018110100%0.099%KU744693.1
1805618056100%0.099%KU681081.3
1775917759100%0.098%KU955593.1
177571775799%0.098%JN860885.1
176941769498%0.099%KF993678.1
1761217612100%0.098%EU545988.1
1744717447100%0.098%KU681082.3
164381643899%0.096%HQ234499.1
1328113281100%0.089%KU720415.1
1327513275100%0.089%KF383115.1
132751327599%0.089%HQ234498.1
1327013270100%0.089%KF268949.1
1327013270100%0.089%DQ859059.1
1326813268100%0.089%KU955595.1
1326313263100%0.089%KF383119.1
1325913259100%0.089%KU955592.1
1325913259100%0.089%LC002520.1
1325213252100%0.089%KF268948.1
1324513245100%0.089%KF268950.1
1324313243100%0.089%KU963573.1
1324313243100%0.089%KU955594.1
1324113241100%0.089%KU955591.1
132181321899%0.089%HQ234501.1
1321613216100%0.089%KF383116.1
1320013200100%0.089%AY632535.2
1314613146100%0.088%KF383117.1
1312613228100%0.088%KU963574.1
131261312699%0.088%HQ234500.1
1294513013100%0.088%KF383118.1
128611286197%0.089%KF383121.1
108621086297%0.084%KF383120.1
50341439987%0.095%KU940227.1
4962496227%0.099%KU312314.1
4935493527%0.099%KU312313.1
4637463725%0.099%KU646828.1
4628462825%0.099%KU646827.1
3431343118%0.099%KU312315.1
3202320217%0.099%KU740199.1
2850419195%0.071%DQ859064.1
2695269514%0.099%KJ634273.1
2042204211%0.099%KU686218.1
2008200811%0.099%KU179098.1
173717379%0.099%KM078936.1
173617369%0.099%KM078961.1
173417349%0.099%KM078930.1
173017309%0.099%KM078971.1
173017309%0.099%KM078970.1
173017309%0.099%KM078933.1
172817289%0.099%KM078929.1
158815888%0.099%KJ873160.1
140614067%0.099%KJ873161.1
137013707%0.098%KM851039.1
133313337%0.097%KM851038.1
133013307%0.099%KU985087.1
132413247%0.099%KU556802.1
1283128310%0.088%AF013415.1
123612366%0.099%KT200609.1
121612166%0.099%KU232300.1
120712076%0.099%KU232290.1
120512056%0.099%KU232297.1
119811986%0.099%KU232294.1
119511956%0.099%KU232292.1
119111916%0.099%KU232298.1
118911896%0.099%KU232293.1
118711876%0.099%KU232296.1
118411846%0.099%KU232295.1
117311736%0.099%KU232288.1
116911696%0.099%KU232289.1
116611666%0.099%KU232299.1
116211626%0.099%KU232291.1
113011306%0.098%KU758878.1
108110818%0.089%KF270886.1
102310238%0.087%AF372422.1
100010005%0.099%KU867812.1
9919917%0.088%KF270887.1
9849847%0.089%KF383022.1
9809807%0.089%KF383026.1
9719717%0.089%KF383032.1
9679677%0.088%EU303241.1
967197965%0.070%EF158064.1
9669667%0.089%KF383037.1
9669667%0.088%KF383034.1
9669667%0.088%KF383029.1
9629627%0.088%KF383033.1
9609607%0.088%KF383036.1
9449447%0.088%KF383028.1
9429427%0.088%KF383039.1
9399397%0.088%KF383031.1
9339337%0.088%KF383038.1
9249247%0.087%KF383046.1
919191265%0.069%KT823415.1
919193865%0.069%FJ753286.2
9119117%0.087%KF383045.1
910200257%0.069%EU566860.1
9069067%0.087%KF383043.1
9069067%0.086%KF383035.1
9029027%0.087%KF383041.1
899198467%0.069%EF158069.1
8978977%0.087%KF383042.1
886183463%0.069%FJ753287.2
883150266%0.069%AY632542.4
8748746%0.087%KF383103.1
8748746%0.087%KF383086.1
8728727%0.086%KF383040.1
8478476%0.087%KF383106.1
8438436%0.086%KF383107.1
8438436%0.086%KF383104.1
8438436%0.086%KF383085.1
8348346%0.086%KF383114.1
8348346%0.086%KF383088.1
8298296%0.086%KF383087.1
8298294%0.099%AB908162.1
8258256%0.086%KF383089.1
8208204%0.099%KU872850.1
8208206%0.086%KF383101.1
8208206%0.086%KF383097.1
820163059%0.068%KC754955.1
820161457%0.068%KC754954.1
8168166%0.086%KF383099.1
8108106%0.085%KF383098.1
791187654%0.068%KC754958.1
776170153%0.068%HM147824.1
7747746%0.084%KF383084.1
7717716%0.084%KF383113.1
760153450%0.068%DQ176636.2
756161557%0.068%EF429199.1
735166655%0.067%KM203863.1
720163755%0.067%KM203860.1
7137137%0.081%KF383017.1
7087087%0.081%KF383016.1
7087087%0.081%KF383015.1
7027027%0.081%KF383021.1
7027027%0.081%KF383020.1
6996993%0.099%KF258813.1
6866867%0.080%KF383019.1
666174150%0.069%JF262780.1
666174150%0.069%JF262779.1
663172150%0.069%EF457906.1
6596596%0.081%KF383092.1
6576576%0.081%KF383093.1
6546546%0.080%KF383095.1
6506503%0.0100%KU985088.1
6486486%0.080%KF383091.1
621157546%9e-17369%FJ410250.1
621158144%9e-17369%FJ410211.1
621157744%9e-17369%FJ410204.1
621157744%9e-17369%FJ410203.1
618147760%1e-17169%JQ686088.2
612159748%4e-17069%JQ048541.1
610145960%2e-16969%KP406804.1
594139659%1e-16469%FM210240.2
592162249%4e-16469%DQ181799.1
5875873%2e-16299%KR815989.1
587159052%2e-16269%AF100462.1
585163847%6e-16269%KJ918750.1
581168549%8e-16169%AY744150.1
581169049%8e-16169%AY744149.1
581169049%8e-16169%AY744148.1
580160043%3e-16068%EU056812.1
578138458%9e-16068%FJ639711.1
578138458%9e-16068%FJ639710.1
576143042%3e-15968%GU131894.1
576143542%3e-15968%GQ868633.1
576168549%3e-15969%AY744147.1
567153542%2e-15668%GU131887.1
565159745%6e-15668%HM582108.1
565160645%6e-15668%HM582100.1
563163648%2e-15568%EU529701.1
562155748%7e-15568%JN819408.1
560165449%2e-15468%HM582117.1
558159042%9e-15468%HM582109.1
558159345%9e-15468%HM582101.1
556158952%3e-15368%KF955369.1
556126842%3e-15368%KF955368.1
556164749%3e-15368%HM582116.1
554161848%1e-15268%EU482580.1
553155248%4e-15268%FJ898466.1
553157651%4e-15268%FJ850050.1
553159152%4e-15268%EU569702.1
547157346%2e-15068%JN819407.1
547160052%2e-15068%EU596483.1
547159150%2e-15068%EU482687.1
5455452%5e-15099%KR816334.1
5445442%2e-14999%KR816333.1
5405402%2e-14899%KR816335.1
5355352%1e-146100%KM212965.1
5295292%4e-14599%KM212966.1
5265262%5e-14499%KM212964.1
5265262%5e-14499%KM212963.1
526160346%5e-14468%JQ922552.1
5085082%1e-138100%KJ680134.1
5025022%6e-13799%KU844090.1
5025022%6e-13799%KJ579441.1
45282828%9e-12267%KF955392.1
45258922%9e-12267%KF955343.1
45264325%9e-12267%KF955341.1
4214212%2e-11299%KU954085.1
421142744%2e-11267%JQ922553.1
4164162%7e-11193%KF383083.1
4164162%7e-11193%KF383052.1
4164162%7e-11193%KF383049.1
4124122%8e-11099%KU926326.1
4124122%8e-11099%KU926325.1
4124122%8e-11099%KU926324.1
4124122%8e-11099%KU926323.1
4124122%8e-11098%KT381874.1
4084082%1e-108100%KM212961.1

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