niman Posted December 9, 2016 Report Posted December 9, 2016 Five sets of 2015 human Yunnan sequences are public at GISAID.
niman Posted December 9, 2016 Author Report Posted December 9, 2016 A/Yunnan/DQ002/2015(H5N6) EPI_ISL_200838 H5N6 2280 2274 2151 1701 1497 1380 982 890 --- --- 2015-07-10 A/Yunnan/DQ001/2015(H5N6) EPI_ISL_200837 H5N6 2280 2274 2151 1701 1497 1380 982 890 --- --- 2015-02-10 A/Yunnan/0127/2015 EPI_ISL_195294 H5N6 passage details: E1 2280 2274 2151 1701 1497 1380 982 849 --- --- 2015-02-06 A/Yunnan/14563/2015 EPI_ISL_178261 H5N6 E2 2280 2274 2151 1701 1497 1380 982 838 --- --- 2015-02-06 A/Yunnan/14564/2015 EPI_ISL_178262 H5N6 E1 2280 2274 2151 1701 1497 1380 982 838 --- --- 2015-02-05
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Isolate name: A/Yunnan/DQ002/2015(H5N6) Isolate ID: EPI_ISL_200838 Passage details/history: Type: A / H5N6 Lineage: Sample information Collection date: 2015-07-10 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China / Yunnan Province Additional location information: Patient age: 37 Year(s) Gender: Female Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Institute of Microbiology, Chinese Academy of Sciences Sample ID given by the submitting laboratory: Authors: Address: Institute of Microbiology, Chinese Academy of Sciences No.1 West Beichen Road, Chaoyang District, Beijing 100105 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Yunnan/DQ002/2015(H5N6)|PB2 2280 EPI668891 PB1 A/Yunnan/DQ002/2015(H5N6)|PB1 2274 EPI668892 PA A/Yunnan/DQ002/2015(H5N6)|PA 2151 EPI668893 HA A/Yunnan/DQ002/2015(H5N6)|HA 1701 EPI668895 NP A/Yunnan/DQ002/2015(H5N6)|NP 1497 EPI668888 NA A/Yunnan/DQ002/2015(H5N6)|NA 1380 EPI668894 MP A/Yunnan/DQ002/2015(H5N6)|MP 982 EPI668890 NS A/Yunnan/DQ002/2015(H5N6)|NS 890 EPI668889 Submitter information Submitter: Bi, Yuhai Submission Date: 2015-10-27 Last modifier: Bi, Yuhai Last modified: 2016-08-07 Address: Institute of Microbiology, Chinese Academy of Sciences No.1 West Beichen Road, Chaoyang District, Beijing 100105 China
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668895 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI668815 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI668807 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI668799 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI668847 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%) EPI658695 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI658687 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI658031 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI657666 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI657650 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI657642 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI664605 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI658007 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI657834 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI657706 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI657698 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI656874 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI657690 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 4 (HA) 3118.3 0.000000e+00 1696/1700 (99%) EPI658871 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3116.4 0.000000e+00 1695/1699 (99%) EPI664565 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 4 (HA) 3105.3 0.000000e+00 1697/1704 (99%) EPI668743 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI659159 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1695/1702 (99%) EPI658711 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1695/1702 (99%) EPI587558 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI668887 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI668863 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI658743 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI657658 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI656778 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1683/1686 (99%) EPI587629 A/Yunnan/14564/2015 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI587534 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI657634 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 4 (HA) 3096.1 0.000000e+00 1692/1699 (99%) EPI641398 A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI587621 A/Yunnan/14563/2015 (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI587542 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 4 (HA) 3090.6 0.000000e+00 1691/1701 (99%) EPI668855 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 4 (HA) 3088.7 0.000000e+00 1691/1701 (99%) EPI659103 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3088.7 0.000000e+00 1695/1705 (99%) EPI668879 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI668871 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI587574 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI587550 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI664541 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3083.2 0.000000e+00 1693/1704 (99%) EPI657802 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3083.2 0.000000e+00 1693/1704 (99%) EPI657514 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3083.2 0.000000e+00 1693/1704 (99%) EPI691535 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI641396 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA) 3075.8 0.000000e+00 1689/1701 (99%) EPI550768 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI550763 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI550759 A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI550757 A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI550752 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI691534 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%) EPI641394 A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%) EPI691533 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 4 (HA) 2981.6 0.000000e+00 1673/1702 (98%) EPI641392 A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA) 2981.6 0.000000e+00 1673/1702 (98%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1674/1705 (98%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2966.8 0.000000e+00 1672/1704 (98%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1672/1705 (98%) EPI599292 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA) 2961.3 0.000000e+00 1671/1704 (98%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2959.5 0.000000e+00 1668/1701 (98%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2957.6 0.000000e+00 1670/1704 (98%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1671/1705 (98%) EPI656650 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI599320 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI599313 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2955.8 0.000000e+00 1670/1704 (98%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1670/1705 (97%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1670/1705 (97%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2950.2 0.000000e+00 1670/1705 (97%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2950.2 0.000000e+00 1670/1705 (97%) EPI656658 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI656642 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI656634 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1670/1705 (97%) EPI601941 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2950.2 0.000000e+00 1669/1704 (97%) EPI839147 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1669/1705 (97%) EPI668839 A/environment/Yunnan/07.11 DQXY011/2015(H5N6) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI661807 A/environment/Guangdong/02.11 DGCPSJ050/2015(Mixed) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI661799 A/environment/Guangdong/02.11 DGQTSJ046E/2015(Mixed) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI661663 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1669/1705 (97%) EPI657498 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1669/1705 (97%) EPI656722 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2944.7 0.000000e+00 1668/1704 (97%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2942.8 0.000000e+00 1667/1703 (97%) EPI768621 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 4 (HA) 2939.1 0.000000e+00 1668/1705 (97%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668894 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI668846 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI668806 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI668814 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668797 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 6 (NA) 2527.3 0.000000e+00 1376/1380 (99%) EPI658030 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657641 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657833 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2520.0 0.000000e+00 1374/1379 (99%) EPI657665 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 6 (NA) 2520.0 0.000000e+00 1374/1379 (99%) EPI657649 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 6 (NA) 2520.0 0.000000e+00 1374/1379 (99%) EPI656777 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2520.0 0.000000e+00 1374/1379 (99%) EPI691537 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI668878 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI668742 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI664604 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI658694 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI657705 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI657697 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI657689 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI657633 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI587557 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1374/1380 (99%) EPI664564 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 6 (NA) 2514.4 0.000000e+00 1373/1379 (99%) EPI658686 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2514.4 0.000000e+00 1373/1379 (99%) EPI658006 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 6 (NA) 2514.4 0.000000e+00 1373/1379 (99%) EPI691543 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668886 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668862 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668853 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI658710 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI656873 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI641400 A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI587628 A/Yunnan/14564/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI587620 A/Yunnan/14563/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI587533 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI659158 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2508.9 0.000000e+00 1372/1379 (99%) EPI659102 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2507.0 0.000000e+00 1371/1378 (99%) EPI691550 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI668870 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI641397 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI587549 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI587541 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1371/1380 (99%) EPI657657 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 6 (NA) 2497.8 0.000000e+00 1370/1379 (99%) EPI587573 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 6 (NA) 2495.9 0.000000e+00 1371/1380 (99%) EPI664540 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI657801 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI657513 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI641395 A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI641393 A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI658742 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1367/1377 (99%) EPI602493 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA) 2483.0 0.000000e+00 1368/1380 (99%) EPI602414 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA) 2477.5 0.000000e+00 1367/1380 (99%) EPI601944 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2477.5 0.000000e+00 1367/1380 (99%) EPI599294 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA) 2477.5 0.000000e+00 1367/1380 (99%) EPI530056 A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA) 2477.5 0.000000e+00 1367/1380 (99%) EPI658870 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2475.6 0.000000e+00 1352/1358 (99%) EPI839149 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI687500 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI656721 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI599322 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI550765 A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI550754 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA) 2471.9 0.000000e+00 1366/1380 (98%) EPI656601 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2470.1 0.000000e+00 1365/1379 (98%) EPI656657 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2466.4 0.000000e+00 1365/1380 (98%) EPI656641 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2466.4 0.000000e+00 1365/1380 (98%) EPI601070 A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA) 2466.4 0.000000e+00 1366/1381 (98%) EPI599315 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA) 2466.4 0.000000e+00 1365/1380 (98%) EPI775285 A/duck/Guangzhou/018/2014 (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI656649 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI656633 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI656625 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI602319 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602312 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602305 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602298 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602274 A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602267 A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602260 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602253 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602236 A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602229 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602222 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602208 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602201 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602155 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI602048 A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1364/1380 (98%) EPI601464 A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601453 A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601443 A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601406 A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601394 A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601342 A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601197 A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601190 A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601180 A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601171 A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601162 A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601152 A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601126 A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601117 A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%) EPI601099 A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1365/1381 (98%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668890 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668841 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668813 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668881 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668865 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668857 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668849 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668804 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668798 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668738 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI664560 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI664536 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658738 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658690 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658682 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658002 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657797 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657701 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657685 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657653 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657645 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657637 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657629 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657509 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587624 A/Yunnan/14564/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587616 A/Yunnan/14563/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587553 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587545 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587537 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587529 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658866 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1805.3 0.000000e+00 979/980 (99%) EPI668873 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI664600 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI659154 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI659098 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI658706 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI658026 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI657693 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI657661 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI587569 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI657829 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%) EPI641399 A/Yunnan/0127/2015 (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI656773 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1785.0 0.000000e+00 968/969 (99%) EPI656869 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1783.1 0.000000e+00 967/968 (99%) EPI838142 A/chicken/Guangdong/SIC17/2014 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI596715 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI583836 A/chicken/Suzhou/4957/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI497543 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI497530 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI838124 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI591974 A/chicken/Suzhou/4833/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI583829 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI568615 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI515841 A/Chicken/Nantong/031-2/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI515833 A/Chicken/Nanjing/023/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470069 A/chicken/Rizhao/1313/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470066 A/chicken/Rizhao/723/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470064 A/chicken/Rizhao/437/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470063 A/chicken/Rizhao/249/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470062 A/chicken/Rizhao/85/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI470060 A/chicken/Rizhao/15/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI599766 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI599702 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI599561 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%) EPI599547 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668891 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI668800 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%) EPI668795 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%) EPI668808 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%) EPI668885 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2273/2280 (99%) EPI587626 A/Yunnan/14564/2015 (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2273/2280 (99%) EPI668867 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI668851 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI668739 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI587618 A/Yunnan/14563/2015 (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI587555 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI587547 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%) EPI587539 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI668877 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI668861 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI587571 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI587531 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI657799 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2271/2279 (99%) EPI657511 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2271/2279 (99%) EPI658740 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4163.5 0.000000e+00 2270/2278 (99%) EPI641404 A/Yunnan/0127/2015 (A/H5N6) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI659156 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4161.6 0.000000e+00 2271/2280 (99%) EPI658708 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 1 (PB2) 4159.8 0.000000e+00 2270/2279 (99%) EPI657655 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 1 (PB2) 4152.4 0.000000e+00 2268/2278 (99%) EPI664538 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4150.5 0.000000e+00 2267/2277 (99%) EPI664602 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI664562 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI658028 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI657703 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI657695 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI657687 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI657663 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI657639 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2268/2279 (99%) EPI658004 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4146.8 0.000000e+00 2267/2278 (99%) EPI657647 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 1 (PB2) 4146.8 0.000000e+00 2267/2278 (99%) EPI658692 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4145.0 0.000000e+00 2268/2280 (99%) EPI658684 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4143.2 0.000000e+00 2267/2279 (99%) EPI659100 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4137.6 0.000000e+00 2263/2274 (99%) EPI657631 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 1 (PB2) 4137.6 0.000000e+00 2266/2279 (99%) EPI656775 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4137.6 0.000000e+00 2267/2280 (99%) EPI657831 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4132.1 0.000000e+00 2265/2279 (99%) EPI658868 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4124.7 0.000000e+00 2260/2273 (99%) EPI668844 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 1 (PB2) 4122.8 0.000000e+00 2265/2281 (99%) EPI656871 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4108.1 0.000000e+00 2260/2277 (99%) EPI654178 A/Environment/GD-ZS_44/H9N2/2013-4 (A/H9N2) segment 1 (PB2) 3984.3 0.000000e+00 2237/2277 (98%) EPI583591 A/chicken/Dongguan/2827/2013 (A/H9N2) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%) EPI837954 A/chicken/Guangdong/SIC14/2013 (A/H9N2) segment 1 (PB2) 3953.0 0.000000e+00 2233/2280 (97%) EPI583661 A/chicken/Dongguan/3550/2013 (A/H9N2) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI583619 A/chicken/Dongguan/3056/2013 (A/H9N2) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI583500 A/chicken/Shenzhen/1799/2013 (A/H9N2) segment 1 (PB2) 3951.1 0.000000e+00 2233/2280 (97%) EPI654167 A/Environment/GD-YJ_25005/H9N2/2013 (A/H9N2) segment 1 (PB2) 3945.6 0.000000e+00 2230/2277 (97%) EPI628533 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI583723 A/chicken/Dongguan/4254/2013 (A/H0) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI583549 A/chicken/Shenzhen/2403/2013 (A/H9N2) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%) EPI837990 A/chicken/Guangdong/SIC23/2014 (A/H9N2) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI583675 A/chicken/Shenzhen/3745/2013 (A/H9N2) segment 1 (PB2) 3940.0 0.000000e+00 2231/2280 (97%) EPI583703 A/silkie chicken/Dongguan/4184/2013 (A/H9N2) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI583444 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%) EPI628493 A/Guangdong/02124/2014 (A/H7N9) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI628093 A/Guangdong/0012/2014 (A/H7N9) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI503496 A/Huizhou/01/2013 (A/H7N9) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI476698 A/Guangdong/1/2013 (A/H7N9) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%) EPI655883 A/GD-13/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2222/2277 (97%) EPI655875 A/GD-12/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2222/2277 (97%) EPI628509 A/Guangdong/24999/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI628485 A/Guangdong/02125/2014 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI628421 A/Guangdong/037/2014 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI627981 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI627973 A/Guangdong/0081/2014 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI627742 A/Guangdong/0010/2014 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI602023 A/chicken/Dongguan/4190/2013 (A/H0) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI597437 A/chicken/Dongguan/1009/2014 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI597143 A/chicken/Dongguan/1670/2014 (A/H0) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI597129 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI596868 A/silkie chicken/Dongguan/952/2014 (A/H0) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581995 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581920 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581877 A/chicken/Dongguan/3894/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581760 A/silkie chicken/Dongguan/3528/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581754 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581748 A/silkie chicken/Dongguan/3525/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581729 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581722 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581690 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581641 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581634 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581620 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI581613 A/chicken/Dongguan/3112/2013 (A/H7N9) segment 1 (PB2) 3901.2 0.000000e+00 2224/2280 (97%) EPI837953 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI656027 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2221/2277 (97%) EPI655891 A/GD-18/2014/H7N9/2014-01-07 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2221/2277 (97%) EPI655867 A/GD-10/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2221/2277 (97%) EPI628525 A/environment/Guangdong/25003/2013 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI628501 A/Guangdong/02620/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI628453 A/Guangdong/034/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI628445 A/environment/Guangdong/02622/2013 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI628109 A/Guangdong/0026/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI628101 A/Guangdong/0019/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI627997 A/Guangdong/0065/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%) EPI627949 A/Guangdong/0069/2014 (A/H7N9) segment 1 (PB2) 3895.7 0.000000e+00 2223/2280 (97%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668892 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI668842 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI668801 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI668809 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI668792 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI668852 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI668741 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI664603 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658029 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658005 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657696 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657664 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657640 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI587556 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI664563 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 2 (PB1) 4170.9 0.000000e+00 2268/2273 (99%) EPI657704 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI656776 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI668860 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658741 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658693 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657800 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657512 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI587572 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI587548 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI587532 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658685 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4165.3 0.000000e+00 2267/2273 (99%) EPI587540 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 2 (PB1) 4165.3 0.000000e+00 2267/2274 (99%) EPI668869 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4163.5 0.000000e+00 2267/2274 (99%) EPI657648 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 2 (PB1) 4163.5 0.000000e+00 2266/2272 (99%) EPI668875 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI657832 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI657688 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI668884 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI587627 A/Yunnan/14564/2015 (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI587619 A/Yunnan/14563/2015 (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI658869 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4154.2 0.000000e+00 2265/2273 (99%) EPI664539 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI659157 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI657656 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2259/2265 (99%) EPI656872 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2257/2262 (99%) EPI658709 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 2 (PB1) 4143.2 0.000000e+00 2263/2273 (99%) EPI659101 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4128.4 0.000000e+00 2255/2265 (99%) EPI641403 A/Yunnan/0127/2015 (A/H5N6) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI683148 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI846037 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI838018 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI683160 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI838012 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628718 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI628630 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627383 A/Guangdong/02497/2014 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627119 A/Guangdong/15SF030/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI583739 A/chicken/Yantai/2468/2013 (A/H9N2) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI656352 A/GD-30/2015/H7N9/2015-01-22 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI628702 A/Environment/Hunan/07626/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI627471 A/Fujian/1/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI627231 A/Fujian/23/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI627047 A/Guangdong/15SF081/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI627023 A/Guangdong/15SF027/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI583783 A/chicken/Yantai/2469/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI627455 A/Fujian/3/2015 (A/H7N9) segment 2 (PB1) 4054.5 0.000000e+00 2247/2274 (98%) EPI628694 A/Guangdong/15SF055/2015 (A/H7N9) segment 2 (PB1) 4052.7 0.000000e+00 2247/2274 (98%) EPI846029 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI683158 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI656456 A/GD-81/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2245/2271 (98%) EPI656336 A/GD-27/2015/H7N9/2015-01-21 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2245/2271 (98%) EPI628622 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI627239 A/Fujian/21/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI627199 A/Guangdong/15SF017/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI627191 A/Guangdong/15SF020/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI626983 A/Jiangsu/22184/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI594396 A/chicken/Yantai/2529/2013 (A/H0) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI627215 A/Fujian/25/2015 (A/H7N9) segment 2 (PB1) 4047.1 0.000000e+00 2246/2274 (98%) EPI656472 A/GD-92/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2242/2268 (98%) EPI656432 A/GD-72/2015/H7N9/2015-02-07 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2244/2271 (98%) EPI656312 A/GD-20/2015/H7N9/2015-01-15 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2244/2271 (98%) EPI656304 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2244/2271 (98%) EPI628766 A/Zhejiang/8/2015 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI628638 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI626999 A/Guangdong/15SF080/2015 (A/H7N9) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI599780 A/chicken/Jiangxi/34682/2013 (A/H9N2) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI594380 A/chicken/Yantai/2303/2013 (A/H9N2) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI594373 A/chicken/Yantai/2243/2013 (A/H9N2) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI838004 A/chicken/Shandong/SIC21/2014 (A/H9N2) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI683150 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI656464 A/GD-76/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2241/2268 (98%) EPI628790 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628782 A/Shandong-Taian/01/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628734 A/Anhui/33223/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628726 A/Anhui/33228/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628686 A/Guangdong/15SF054/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2244/2274 (98%) EPI628678 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628670 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628662 A/Anhui/33227/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI628606 A/Environment/Anhui/39280/2015 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI576593 A/chicken/Guangdong/SD1/2013 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI576592 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI576591 A/chicken/Guangdong/G2/2013 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI568751 A/goose/Jiangsu/1027/2013 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI545787 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668893 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668843 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668810 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668802 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668793 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI668854 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI668740 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI659155 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI658707 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI657638 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI657630 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI587554 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI657646 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 3 (PA) 3916.0 0.000000e+00 2138/2147 (99%) EPI587538 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 3 (PA) 3914.2 0.000000e+00 2140/2151 (99%) EPI668883 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668876 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668868 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668859 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI659099 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI658683 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI658027 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI657830 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI657662 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI587625 A/Yunnan/14564/2015 (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI587570 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI587530 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI658739 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI658691 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI658003 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657798 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657702 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657694 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657686 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657510 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI587617 A/Yunnan/14563/2015 (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI587546 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI657654 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 3 (PA) 3904.9 0.000000e+00 2138/2150 (99%) EPI664601 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI656774 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 3 (PA) 3901.2 0.000000e+00 2139/2152 (99%) EPI664537 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3897.6 0.000000e+00 2132/2143 (99%) EPI627213 A/Fujian/25/2015 (A/H7N9) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI627117 A/Guangdong/15SF030/2015 (A/H7N9) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI628684 A/Guangdong/15SF054/2015 (A/H7N9) segment 3 (PA) 3869.9 0.000000e+00 2132/2151 (99%) EPI628620 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI627469 A/Fujian/1/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI627309 A/Fujian/8/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI627045 A/Guangdong/15SF081/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI566127 A/Fujian/09273/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI541773 A/Taiwan/3/2013 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI769574 A/Fujian/16/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI628628 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627493 A/Fujian/20/2014 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627461 A/Fujian/2/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627381 A/Guangdong/02497/2014 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627293 A/Fujian/19/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627229 A/Fujian/23/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI627101 A/Fujian/17/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI626997 A/Guangdong/15SF080/2015 (A/H7N9) segment 3 (PA) 3862.5 0.000000e+00 2131/2151 (99%) EPI641342 A/Yunnan/0127/2015 (A/H5N6) segment 3 (PA) 3860.6 0.000000e+00 2130/2151 (99%) EPI769566 A/Fujian/10/2015 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI656374 A/GD-54/2015/H7N9/2015-01-27 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2128/2148 (99%) EPI627221 A/Fujian/24/2015 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI627133 A/Zhejiang/1/2015 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI621113 A/Quzhou/1/2015 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI566080 A/Guizhou/03240/2015 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI628692 A/Guangdong/15SF055/2015 (A/H7N9) segment 3 (PA) 3853.2 0.000000e+00 2129/2151 (98%) EPI692637 A/chicken/Henan/F246/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI692635 A/chicken/Henan/117/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI692633 A/chicken/Henan/114/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI680771 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI680758 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI680733 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI663521 A/duck/Sunan/040802/2013 (A/H0) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI628636 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI628180 A/Hunan/09193/2014 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI627253 A/Fujian/7/2015 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI627157 A/Zhejiang/3/2015 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI621114 A/Quzhou/2/2015 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI596649 A/Shanghai/02/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI576875 A/chicken/Jiangxi/12544/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI576873 A/chicken/Jiangxi/12492/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI576562 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI545207 A/duck/Sunan/040802G/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI542255 A/Shanghai/MH01/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI532269 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI532268 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI509114 A/Fujian/05/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI509065 A/Hunan/0070/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI503521 A/environment/Guangdong/25/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI497934 A/Nanjing/6/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI497890 A/Wuxi/4/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI497844 A/environment/Suzhou/8/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI490975 A/Environment/Guangdong/C13281030/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI490967 A/Environment/Guangdong/C13281025/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI468345 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI467323 A/Wuxi/2/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI457873 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI457721 A/environment/Fujian/SC337/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI457713 A/environment/Henan/SC232/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%) EPI457689 A/environment/Shandong/SD039/2013 (A/H7N9) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%)
niman Posted December 9, 2016 Author Report Posted December 9, 2016 Align Segment-ID Name Score E-Value Identity EPI668888 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI668866 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI668805 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI668796 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI658736 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657827 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657683 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657651 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657643 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657635 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI657507 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI587543 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI664598 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 5 (NP) 2763.7 0.000000e+00 1496/1496 (100%) EPI658000 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 5 (NP) 2763.7 0.000000e+00 1496/1496 (100%) EPI657795 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2763.7 0.000000e+00 1496/1496 (100%) EPI657699 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 5 (NP) 2763.7 0.000000e+00 1496/1496 (100%) EPI657691 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 5 (NP) 2763.7 0.000000e+00 1496/1496 (100%) EPI664558 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 5 (NP) 2761.9 0.000000e+00 1495/1495 (100%) EPI658024 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 5 (NP) 2761.9 0.000000e+00 1495/1495 (100%) EPI587535 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 5 (NP) 2761.9 0.000000e+00 1496/1497 (99%) EPI668882 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668874 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668858 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668850 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668812 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668736 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657659 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI656867 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1494/1494 (100%) EPI587622 A/Yunnan/14564/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587614 A/Yunnan/14563/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587567 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587551 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587527 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI659152 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI659096 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI658704 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI656771 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1492/1492 (100%) EPI658680 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI657627 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI658688 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI691544 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 5 (NP) 2745.2 0.000000e+00 1492/1495 (99%) EPI691538 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 5 (NP) 2745.2 0.000000e+00 1492/1495 (99%) EPI658864 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2737.9 0.000000e+00 1486/1488 (99%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI641401 A/Yunnan/0127/2015 (A/H5N6) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
niman Posted December 10, 2016 Author Report Posted December 10, 2016 Align Segment-ID Name Score E-Value Identity EPI668889 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668880 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668848 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668840 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668811 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668803 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668794 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668737 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI659153 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658737 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658705 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658689 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658681 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657796 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657652 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657644 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657508 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587623 A/Yunnan/14564/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587615 A/Yunnan/14563/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587552 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668864 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI668856 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI658025 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657828 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657660 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657636 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657628 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587544 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587528 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587536 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 8 (NS) 1541.2 0.000000e+00 836/838 (99%) EPI664599 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664559 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664535 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI658001 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657700 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657692 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657684 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI659097 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI641402 A/Yunnan/0127/2015 (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI668872 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI656772 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 828/829 (99%) EPI587568 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI658865 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1513.5 0.000000e+00 823/825 (99%) EPI838166 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI497500 A/environment/Chongqing/00516/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI692043 A/pigeon/Hubei/269/2012 (A/H9N2) segment 8 (NS) 1489.5 0.000000e+00 827/838 (98%) EPI838176 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI656868 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1484.0 0.000000e+00 807/809 (99%) EPI838188 A/chicken/Guangdong/SIC27/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838185 A/chicken/Guangdong/SIC18/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838182 A/chicken/Guangxi/SIC19/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI736589 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI692041 A/pigeon/Hubei/228/2012 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI690482 A/Zhongshan/201501/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI683109 A/chicken/Wuhan/JXQL01/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI664567 A/environment/Yunnan/03.17 DQJT0015-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658457 A/environment/Jiangxi/05.07 NCJD0095C/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658225 A/chicken/Jiangxi/05.06 NCDZT0043B-P/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI654120 A/Chicken/GD-ZS_720/H7N9/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 824/835 (98%) EPI628714 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI628418 A/Guangdong/037/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627994 A/Guangdong/0065/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627970 A/Guangdong/0081/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627946 A/Guangdong/0069/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627938 A/Guangdong/0066/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627771 A/Guangdong-Guangzhou/XN05586/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627723 A/Guangdong/0024/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627667 A/Guangdong-Guangzhou/XN02778/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627651 A/Guangdong-Guangzhou/XN00588/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602474 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602142 A/chicken/Jiangxi/18955/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602124 A/chicken/Jiangxi/18474/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602090 A/chicken/Jiangxi/20471/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601956 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601928 A/chicken/Jiangxi/23786/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601919 A/chicken/Jiangxi/23241/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601891 A/chicken/Jiangxi/1271/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601880 A/chicken/Jiangxi/36242/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601813 A/chicken/Jiangxi/36266/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601580 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601552 A/chicken/Jiangxi/36240/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601526 A/chicken/Jiangxi/20420/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601506 A/chicken/Jiangxi/36278/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601310 A/chicken/Jiangxi/1247/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601235 A/duck/Jiangxi/36477/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600086 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600079 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600072 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599820 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599760 A/chicken/Jiangxi/31872/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 827/839 (98%) EPI599746 A/chicken/Jiangxi/30772/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599739 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599583 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599562 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599555 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599548 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599527 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599520 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599513 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599506 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)
niman Posted December 10, 2016 Author Report Posted December 10, 2016 Isolate name: A/Yunnan/DQ001/2015(H5N6) Isolate ID: EPI_ISL_200837 Passage details/history: Type: A / H5N6 Lineage: Sample information Collection date: 2015-02-10 Host Human Additional host information: Zip code: Patient status: Deceased Last vaccinated: In-vivo pathogenicity test: Location: China / Yunnan Province Additional location information: Patient age: 44 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Institute of Microbiology, Chinese Academy of Sciences Sample ID given by the submitting laboratory: Authors: Address: Institute of Microbiology, Chinese Academy of Sciences No.1 West Beichen Road, Chaoyang District, Beijing 100105 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Yunnan/DQ001/2015(H5N6)|PB2 2280 EPI668885 PB1 A/Yunnan/DQ001/2015(H5N6)|PB1 2274 EPI668884 PA A/Yunnan/DQ001/2015(H5N6)|PA 2151 EPI668883 HA A/Yunnan/DQ001/2015(H5N6)|HA 1701 EPI668887 NP A/Yunnan/DQ001/2015(H5N6)|NP 1497 EPI668882 NA A/Yunnan/DQ001/2015(H5N6)|NA 1380 EPI668886 MP A/Yunnan/DQ001/2015(H5N6)|MP 982 EPI668881 NS A/Yunnan/DQ001/2015(H5N6)|NS 890 EPI668880 Submitter information Submitter: Bi, Yuhai Submission Date: 2015-10-27 Last modifier: Bi, Yuhai Last modified: 2016-08-07 Address: Institute of Microbiology, Chinese Academy of Sciences No.1 West Beichen Road, Chaoyang District, Beijing 100105 China
niman Posted December 10, 2016 Author Report Posted December 10, 2016 Align Segment-ID Name Score E-Value Identity EPI668887 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI587629 A/Yunnan/14564/2015 (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI641398 A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%) EPI587621 A/Yunnan/14563/2015 (A/H5N6) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%) EPI668863 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%) EPI587534 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%) EPI668743 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI587558 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI587542 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 4 (HA) 3123.8 0.000000e+00 1697/1701 (99%) EPI668879 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI668871 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI658743 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI657658 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI587574 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI587550 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI659159 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI658711 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI658695 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI658687 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI658031 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI657666 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI657650 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI657642 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI668855 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 4 (HA) 3110.9 0.000000e+00 1695/1701 (99%) EPI664605 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI658007 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657834 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657706 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657698 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI656874 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657690 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 4 (HA) 3107.2 0.000000e+00 1694/1700 (99%) EPI658871 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3105.3 0.000000e+00 1693/1699 (99%) EPI657802 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3105.3 0.000000e+00 1697/1704 (99%) EPI657514 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3105.3 0.000000e+00 1697/1704 (99%) EPI659103 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3099.8 0.000000e+00 1696/1704 (99%) EPI691535 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI668895 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI668815 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI668807 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI668799 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI641396 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%) EPI664565 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 4 (HA) 3094.3 0.000000e+00 1695/1704 (99%) EPI664541 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3094.3 0.000000e+00 1695/1704 (99%) EPI668847 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%) EPI656778 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3086.9 0.000000e+00 1681/1686 (99%) EPI657634 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 4 (HA) 3085.0 0.000000e+00 1690/1699 (99%) EPI550768 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3049.9 0.000000e+00 1687/1704 (99%) EPI550763 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3049.9 0.000000e+00 1687/1704 (99%) EPI550759 A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA) 3049.9 0.000000e+00 1687/1704 (99%) EPI550757 A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA) 3049.9 0.000000e+00 1687/1704 (99%) EPI550752 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA) 3044.4 0.000000e+00 1686/1704 (98%) EPI691534 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 4 (HA) 3031.5 0.000000e+00 1682/1702 (98%) EPI641394 A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA) 3031.5 0.000000e+00 1682/1702 (98%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1680/1705 (98%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI691533 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 4 (HA) 3003.8 0.000000e+00 1677/1702 (98%) EPI641392 A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA) 3003.8 0.000000e+00 1677/1702 (98%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599292 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2990.8 0.000000e+00 1676/1704 (98%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI656650 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599320 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599313 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI656658 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI656642 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI656634 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI601941 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI839147 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI661663 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI656722 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2976.1 0.000000e+00 1673/1703 (98%) EPI768621 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1674/1705 (98%) EPI657498 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1674/1705 (98%) EPI645982 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2972.4 0.000000e+00 1673/1704 (98%)
niman Posted December 10, 2016 Author Report Posted December 10, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI668886 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI641400 A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587628 A/Yunnan/14564/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587620 A/Yunnan/14563/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI691537 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668878 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668742 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI587557 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI691543 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668862 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668853 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658710 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658030 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI657641 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI587533 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI659158 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657833 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657665 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657649 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI656777 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI659102 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2534.7 0.000000e+00 1376/1378 (99%) EPI691550 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI668870 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI664604 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI658694 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657705 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657697 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657689 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657633 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI641397 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587549 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587541 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1376/1380 (99%) EPI664564 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658686 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658006 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI656873 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2527.3 0.000000e+00 1376/1380 (99%) EPI657657 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 6 (NA) 2525.5 0.000000e+00 1375/1379 (99%) EPI587573 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 6 (NA) 2523.6 0.000000e+00 1376/1380 (99%) EPI668814 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI664540 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657801 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657513 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641395 A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641393 A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI658742 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1372/1377 (99%) EPI668894 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668846 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668806 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI602414 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI601944 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI599294 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI530056 A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI839149 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI687500 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI668797 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656721 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI602493 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI599322 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550765 A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550754 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656601 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2497.8 0.000000e+00 1370/1379 (99%) EPI656657 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI656641 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI601070 A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1371/1381 (99%) EPI599315 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI658870 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2492.3 0.000000e+00 1355/1358 (99%) EPI656649 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI656633 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI656625 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI602319 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602312 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602305 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602298 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602274 A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602267 A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602260 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602253 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602236 A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602229 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602222 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602208 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602201 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602155 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602048 A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI601464 A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601453 A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601443 A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601406 A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601394 A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601342 A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601197 A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601190 A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601180 A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601171 A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601162 A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601152 A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601126 A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601117 A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601099 A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601080 A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) Alignments
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Align Segment-ID Name Score E-Value Identity EPI668881 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668865 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668857 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668849 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668738 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664560 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI664536 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658738 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658690 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658682 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658002 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657797 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657701 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657685 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657653 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657645 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657637 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657629 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI657509 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587624 A/Yunnan/14564/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587616 A/Yunnan/14563/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587553 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587545 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587537 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI587529 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI658866 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1810.8 0.000000e+00 980/980 (100%) EPI668890 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668873 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668841 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668813 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI664600 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI659154 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI659098 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658706 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI658026 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657693 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI657661 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI587569 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 7 (MP) 1809.0 0.000000e+00 981/982 (99%) EPI668804 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI668798 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI657829 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1803.5 0.000000e+00 980/982 (99%) EPI641399 A/Yunnan/0127/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI656773 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1790.5 0.000000e+00 969/969 (100%) EPI656869 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1788.7 0.000000e+00 968/968 (100%) EPI838142 A/chicken/Guangdong/SIC17/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI596715 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI583836 A/chicken/Suzhou/4957/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI497543 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI497530 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI838124 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI591974 A/chicken/Suzhou/4833/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI583829 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI568615 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI515841 A/Chicken/Nantong/031-2/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI515833 A/Chicken/Nanjing/023/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470069 A/chicken/Rizhao/1313/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470066 A/chicken/Rizhao/723/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470064 A/chicken/Rizhao/437/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470063 A/chicken/Rizhao/249/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470062 A/chicken/Rizhao/85/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI470060 A/chicken/Rizhao/15/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599766 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599702 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599561 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI599547 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI668885 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI587626 A/Yunnan/14564/2015 (A/H5N6) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI668867 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI668851 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI668739 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI587618 A/Yunnan/14563/2015 (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI587555 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI587547 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 1 (PB2) 4202.2 0.000000e+00 2278/2280 (99%) EPI587539 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 1 (PB2) 4198.6 0.000000e+00 2277/2280 (99%) EPI668877 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI668861 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI587571 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI587531 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI657799 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2276/2279 (99%) EPI657511 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4194.9 0.000000e+00 2276/2279 (99%) EPI658740 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2275/2278 (99%) EPI641404 A/Yunnan/0127/2015 (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2276/2280 (99%) EPI659156 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI658708 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 1 (PB2) 4189.3 0.000000e+00 2275/2279 (99%) EPI657655 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 1 (PB2) 4181.9 0.000000e+00 2273/2278 (99%) EPI664538 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4180.1 0.000000e+00 2272/2277 (99%) EPI664602 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI664562 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI658028 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657703 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657695 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657687 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657663 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657639 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI658004 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2272/2278 (99%) EPI657647 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 1 (PB2) 4176.4 0.000000e+00 2272/2278 (99%) EPI668891 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2273/2280 (99%) EPI668795 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2273/2280 (99%) EPI658692 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4174.5 0.000000e+00 2273/2280 (99%) EPI658684 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4172.7 0.000000e+00 2272/2279 (99%) EPI668800 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 1 (PB2) 4169.0 0.000000e+00 2272/2280 (99%) EPI659100 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2268/2274 (99%) EPI657631 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI656775 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%) EPI657831 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4161.6 0.000000e+00 2270/2279 (99%) EPI668808 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4157.9 0.000000e+00 2270/2280 (99%) EPI658868 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4154.2 0.000000e+00 2265/2273 (99%) EPI656871 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4137.6 0.000000e+00 2265/2277 (99%) EPI668844 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 1 (PB2) 4097.0 0.000000e+00 2260/2281 (99%) EPI654178 A/Environment/GD-ZS_44/H9N2/2013-4 (A/H9N2) segment 1 (PB2) 4013.9 0.000000e+00 2242/2277 (98%) EPI583591 A/chicken/Dongguan/2827/2013 (A/H9N2) segment 1 (PB2) 3986.2 0.000000e+00 2239/2280 (98%) EPI583619 A/chicken/Dongguan/3056/2013 (A/H9N2) segment 1 (PB2) 3980.7 0.000000e+00 2238/2280 (98%) EPI654167 A/Environment/GD-YJ_25005/H9N2/2013 (A/H9N2) segment 1 (PB2) 3975.1 0.000000e+00 2235/2277 (98%) EPI628533 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 1 (PB2) 3975.1 0.000000e+00 2237/2280 (98%) EPI583723 A/chicken/Dongguan/4254/2013 (A/H0) segment 1 (PB2) 3975.1 0.000000e+00 2237/2280 (98%) EPI583549 A/chicken/Shenzhen/2403/2013 (A/H9N2) segment 1 (PB2) 3975.1 0.000000e+00 2237/2280 (98%) EPI837954 A/chicken/Guangdong/SIC14/2013 (A/H9N2) segment 1 (PB2) 3971.4 0.000000e+00 2236/2280 (98%) EPI837990 A/chicken/Guangdong/SIC23/2014 (A/H9N2) segment 1 (PB2) 3969.6 0.000000e+00 2236/2280 (98%) EPI583675 A/chicken/Shenzhen/3745/2013 (A/H9N2) segment 1 (PB2) 3969.6 0.000000e+00 2236/2280 (98%) EPI583661 A/chicken/Dongguan/3550/2013 (A/H9N2) segment 1 (PB2) 3969.6 0.000000e+00 2236/2280 (98%) EPI583500 A/chicken/Shenzhen/1799/2013 (A/H9N2) segment 1 (PB2) 3969.6 0.000000e+00 2236/2280 (98%) EPI583703 A/silkie chicken/Dongguan/4184/2013 (A/H9N2) segment 1 (PB2) 3953.0 0.000000e+00 2233/2280 (97%) EPI583444 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 1 (PB2) 3953.0 0.000000e+00 2233/2280 (97%) EPI628493 A/Guangdong/02124/2014 (A/H7N9) segment 1 (PB2) 3936.3 0.000000e+00 2230/2280 (97%) EPI628093 A/Guangdong/0012/2014 (A/H7N9) segment 1 (PB2) 3936.3 0.000000e+00 2230/2280 (97%) EPI503496 A/Huizhou/01/2013 (A/H7N9) segment 1 (PB2) 3936.3 0.000000e+00 2230/2280 (97%) EPI476698 A/Guangdong/1/2013 (A/H7N9) segment 1 (PB2) 3936.3 0.000000e+00 2230/2280 (97%) EPI655883 A/GD-13/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2227/2277 (97%) EPI655875 A/GD-12/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2227/2277 (97%) EPI628509 A/Guangdong/24999/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI628485 A/Guangdong/02125/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI628421 A/Guangdong/037/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI627981 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI627973 A/Guangdong/0081/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI627742 A/Guangdong/0010/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI602023 A/chicken/Dongguan/4190/2013 (A/H0) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI597437 A/chicken/Dongguan/1009/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI597143 A/chicken/Dongguan/1670/2014 (A/H0) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI597129 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI596868 A/silkie chicken/Dongguan/952/2014 (A/H0) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581995 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581920 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581877 A/chicken/Dongguan/3894/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581760 A/silkie chicken/Dongguan/3528/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581754 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581748 A/silkie chicken/Dongguan/3525/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581729 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581722 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581690 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581641 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581634 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581620 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI581613 A/chicken/Dongguan/3112/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI837953 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI656027 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI655891 A/GD-18/2014/H7N9/2014-01-07 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI655867 A/GD-10/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI628525 A/environment/Guangdong/25003/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628501 A/Guangdong/02620/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628453 A/Guangdong/034/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628445 A/environment/Guangdong/02622/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628101 A/Guangdong/0019/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627997 A/Guangdong/0065/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627949 A/Guangdong/0069/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627941 A/Guangdong/0066/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Align Segment-ID Name Score E-Value Identity EPI668884 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI587627 A/Yunnan/14564/2015 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI587619 A/Yunnan/14563/2015 (A/H5N6) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI668875 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI668741 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 2 (PB1) 4183.8 0.000000e+00 2271/2274 (99%) EPI668860 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI668852 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587572 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587548 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587532 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 2 (PB1) 4178.2 0.000000e+00 2270/2274 (99%) EPI587540 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 2 (PB1) 4176.4 0.000000e+00 2269/2274 (99%) EPI668869 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 2 (PB1) 4174.5 0.000000e+00 2269/2274 (99%) EPI664603 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658029 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI658005 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657696 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657664 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI657640 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI587556 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 2 (PB1) 4172.7 0.000000e+00 2269/2274 (99%) EPI664563 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 2 (PB1) 4170.9 0.000000e+00 2268/2273 (99%) EPI657704 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI656776 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4169.0 0.000000e+00 2267/2272 (99%) EPI658741 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658693 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657800 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI657512 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%) EPI658685 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4165.3 0.000000e+00 2267/2273 (99%) EPI657648 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 2 (PB1) 4163.5 0.000000e+00 2266/2272 (99%) EPI659157 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%) EPI657832 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI657688 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 2 (PB1) 4161.6 0.000000e+00 2263/2268 (99%) EPI668892 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668842 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668809 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI668801 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%) EPI658869 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4154.2 0.000000e+00 2265/2273 (99%) EPI658709 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 2 (PB1) 4154.2 0.000000e+00 2265/2273 (99%) EPI664539 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2265/2274 (99%) EPI657656 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2259/2265 (99%) EPI656872 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 2 (PB1) 4150.5 0.000000e+00 2257/2262 (99%) EPI668792 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2263/2274 (99%) EPI659101 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 2 (PB1) 4139.5 0.000000e+00 2257/2265 (99%) EPI641403 A/Yunnan/0127/2015 (A/H5N6) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%) EPI683148 A/chicken/Wenzhou/YHQL04/2014 (A/H9N2) segment 2 (PB1) 4100.7 0.000000e+00 2256/2274 (99%) EPI846037 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 2 (PB1) 4089.6 0.000000e+00 2254/2274 (99%) EPI838018 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI683160 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI838012 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI628718 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI628630 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI627383 A/Guangdong/02497/2014 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI627119 A/Guangdong/15SF030/2015 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI583739 A/chicken/Yantai/2468/2013 (A/H9N2) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI656352 A/GD-30/2015/H7N9/2015-01-22 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2248/2271 (98%) EPI627471 A/Fujian/1/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627231 A/Fujian/23/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627047 A/Guangdong/15SF081/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627023 A/Guangdong/15SF027/2015 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI583783 A/chicken/Yantai/2469/2013 (A/H9N2) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI627455 A/Fujian/3/2015 (A/H7N9) segment 2 (PB1) 4065.6 0.000000e+00 2249/2274 (98%) EPI628694 A/Guangdong/15SF055/2015 (A/H7N9) segment 2 (PB1) 4063.7 0.000000e+00 2249/2274 (98%) EPI656456 A/GD-81/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2247/2271 (98%) EPI656336 A/GD-27/2015/H7N9/2015-01-21 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2247/2271 (98%) EPI628622 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627239 A/Fujian/21/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627199 A/Guangdong/15SF017/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627191 A/Guangdong/15SF020/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI626983 A/Jiangsu/22184/2015 (A/H7N9) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI594396 A/chicken/Yantai/2529/2013 (A/H0) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI627215 A/Fujian/25/2015 (A/H7N9) segment 2 (PB1) 4058.2 0.000000e+00 2248/2274 (98%) EPI656472 A/GD-92/2015/H7N9/2015-02-26 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2244/2268 (98%) EPI656432 A/GD-72/2015/H7N9/2015-02-07 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI656312 A/GD-20/2015/H7N9/2015-01-15 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI656304 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2246/2271 (98%) EPI628766 A/Zhejiang/8/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI628702 A/Environment/Hunan/07626/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI628638 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI626999 A/Guangdong/15SF080/2015 (A/H7N9) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI599780 A/chicken/Jiangxi/34682/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI594380 A/chicken/Yantai/2303/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI594373 A/chicken/Yantai/2243/2013 (A/H9N2) segment 2 (PB1) 4056.4 0.000000e+00 2248/2274 (98%) EPI838004 A/chicken/Shandong/SIC21/2014 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI683158 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI683150 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI656464 A/GD-76/2015/H7N9/2015-02-10 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2243/2268 (98%) EPI628790 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628782 A/Shandong-Taian/01/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628734 A/Anhui/33223/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628726 A/Anhui/33228/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628686 A/Guangdong/15SF054/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2246/2274 (98%) EPI628678 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628670 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628662 A/Anhui/33227/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI628606 A/Environment/Anhui/39280/2015 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576593 A/chicken/Guangdong/SD1/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576592 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI576591 A/chicken/Guangdong/G2/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI568751 A/goose/Jiangsu/1027/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI545787 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI542310 A/Shanghai/MH01/2013 (A/H7N9) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Align Segment-ID Name Score E-Value Identity EPI668883 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI587625 A/Yunnan/14564/2015 (A/H5N6) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI668854 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI668740 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI659155 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI658707 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI587617 A/Yunnan/14563/2015 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI587554 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 3 (PA) 3967.7 0.000000e+00 2150/2151 (99%) EPI587538 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 3 (PA) 3964.0 0.000000e+00 2149/2151 (99%) EPI668876 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI668868 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI668859 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI659099 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI587570 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI587530 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI658739 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI657798 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI657638 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI657630 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI657510 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI587546 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%) EPI657654 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 3 (PA) 3954.8 0.000000e+00 2147/2150 (99%) EPI657646 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 3 (PA) 3954.8 0.000000e+00 2145/2147 (99%) EPI658683 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI658027 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657830 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI657662 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI658691 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI658003 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI657702 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI657694 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI657686 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 3 (PA) 3945.6 0.000000e+00 2146/2151 (99%) EPI664601 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2145/2151 (99%) EPI656774 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 3 (PA) 3940.0 0.000000e+00 2146/2152 (99%) EPI664537 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 3 (PA) 3936.3 0.000000e+00 2139/2143 (99%) EPI627117 A/Guangdong/15SF030/2015 (A/H7N9) segment 3 (PA) 3923.4 0.000000e+00 2142/2151 (99%) EPI641342 A/Yunnan/0127/2015 (A/H5N6) segment 3 (PA) 3921.6 0.000000e+00 2141/2151 (99%) EPI628684 A/Guangdong/15SF054/2015 (A/H7N9) segment 3 (PA) 3919.7 0.000000e+00 2141/2151 (99%) EPI668793 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI628620 A/Environment/Guangdong/21231/2015 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI627469 A/Fujian/1/2015 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI627309 A/Fujian/8/2015 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI566127 A/Fujian/09273/2015 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI541773 A/Taiwan/3/2013 (A/H7N9) segment 3 (PA) 3917.9 0.000000e+00 2141/2151 (99%) EPI769574 A/Fujian/16/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668893 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668843 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668810 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI668802 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI628628 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627493 A/Fujian/20/2014 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627461 A/Fujian/2/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627381 A/Guangdong/02497/2014 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627293 A/Fujian/19/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627229 A/Fujian/23/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627213 A/Fujian/25/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627101 A/Fujian/17/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI627045 A/Guangdong/15SF081/2015 (A/H7N9) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI769566 A/Fujian/10/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI656374 A/GD-54/2015/H7N9/2015-01-27 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2137/2148 (99%) EPI627221 A/Fujian/24/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI627133 A/Zhejiang/1/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI626997 A/Guangdong/15SF080/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI621113 A/Quzhou/1/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI566080 A/Guizhou/03240/2015 (A/H7N9) segment 3 (PA) 3906.8 0.000000e+00 2139/2151 (99%) EPI628692 A/Guangdong/15SF055/2015 (A/H7N9) segment 3 (PA) 3903.1 0.000000e+00 2138/2151 (99%) EPI692637 A/chicken/Henan/F246/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI692635 A/chicken/Henan/117/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI692633 A/chicken/Henan/114/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI680771 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI680758 A/chicken/Zhejiang/C38/2013 (A/H9N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI680733 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI663521 A/duck/Sunan/040802/2013 (A/H0) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI628636 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI628180 A/Hunan/09193/2014 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI627253 A/Fujian/7/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI627157 A/Zhejiang/3/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI621114 A/Quzhou/2/2015 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI596649 A/Shanghai/02/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI576875 A/chicken/Jiangxi/12544/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI576873 A/chicken/Jiangxi/12492/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI576562 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI545207 A/duck/Sunan/040802G/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI542255 A/Shanghai/MH01/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI532269 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI532268 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI509114 A/Fujian/05/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI509065 A/Hunan/0070/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI497934 A/Nanjing/6/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI497890 A/Wuxi/4/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI497844 A/environment/Suzhou/8/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI490975 A/Environment/Guangdong/C13281030/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI468345 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457873 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457721 A/environment/Fujian/SC337/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457713 A/environment/Henan/SC232/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457689 A/environment/Shandong/SD039/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457681 A/environment/Shandong/SD049/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457633 A/pigeon/Shanghai/S1421/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%) EPI457617 A/wild pigeon/Jiangsu/SD001/2013 (A/H7N9) segment 3 (PA) 3901.2 0.000000e+00 2138/2151 (99%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Align Segment-ID Name Score E-Value Identity EPI668882 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI587622 A/Yunnan/14564/2015 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI587614 A/Yunnan/14563/2015 (A/H5N6) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI668888 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668866 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668805 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI668796 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI658736 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657827 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657683 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657651 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657643 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657635 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI657507 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI587543 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI664598 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI658000 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657795 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657699 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI657691 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%) EPI664558 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1494/1495 (99%) EPI658024 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1494/1495 (99%) EPI587535 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 5 (NP) 2756.3 0.000000e+00 1495/1497 (99%) EPI668874 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668858 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668850 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668812 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI668736 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI657659 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI656867 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1493/1494 (99%) EPI587567 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI587551 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI587527 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 5 (NP) 2754.5 0.000000e+00 1495/1497 (99%) EPI659152 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI659096 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI658704 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%) EPI656771 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 5 (NP) 2750.8 0.000000e+00 1491/1492 (99%) EPI658680 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI657627 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 5 (NP) 2748.9 0.000000e+00 1494/1497 (99%) EPI658688 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2747.1 0.000000e+00 1493/1496 (99%) EPI691544 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 5 (NP) 2739.7 0.000000e+00 1491/1495 (99%) EPI691538 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 5 (NP) 2739.7 0.000000e+00 1491/1495 (99%) EPI658864 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 5 (NP) 2732.3 0.000000e+00 1485/1488 (99%) EPI641401 A/Yunnan/0127/2015 (A/H5N6) segment 5 (NP) 2732.3 0.000000e+00 1491/1497 (99%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%) Alignments
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Align Segment-ID Name Score E-Value Identity EPI668889 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668880 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668848 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668840 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668811 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668803 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668794 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668737 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI659153 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658737 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658705 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658689 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI658681 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657796 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657652 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657644 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI657508 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587623 A/Yunnan/14564/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587615 A/Yunnan/14563/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI587552 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI668864 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI668856 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI658025 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657828 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657660 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657636 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI657628 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587544 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587528 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%) EPI587536 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 8 (NS) 1541.2 0.000000e+00 836/838 (99%) EPI664599 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664559 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI664535 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI658001 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657700 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657692 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI657684 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI659097 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI641402 A/Yunnan/0127/2015 (A/H5N6) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%) EPI668872 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI656772 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 828/829 (99%) EPI587568 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%) EPI658865 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 8 (NS) 1513.5 0.000000e+00 823/825 (99%) EPI838166 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI497500 A/environment/Chongqing/00516/2013 (A/H9N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI692043 A/pigeon/Hubei/269/2012 (A/H9N2) segment 8 (NS) 1489.5 0.000000e+00 827/838 (98%) EPI838176 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI656868 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 8 (NS) 1484.0 0.000000e+00 807/809 (99%) EPI838188 A/chicken/Guangdong/SIC27/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838185 A/chicken/Guangdong/SIC18/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI838182 A/chicken/Guangxi/SIC19/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI736589 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI692041 A/pigeon/Hubei/228/2012 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI690482 A/Zhongshan/201501/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI683109 A/chicken/Wuhan/JXQL01/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI664567 A/environment/Yunnan/03.17 DQJT0015-Z/2015(Mixed) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658457 A/environment/Jiangxi/05.07 NCJD0095C/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI658225 A/chicken/Jiangxi/05.06 NCDZT0043B-P/2015(H5N6) (A/H5N6) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI654120 A/Chicken/GD-ZS_720/H7N9/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 824/835 (98%) EPI628714 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI628418 A/Guangdong/037/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627994 A/Guangdong/0065/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627970 A/Guangdong/0081/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627946 A/Guangdong/0069/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627938 A/Guangdong/0066/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627771 A/Guangdong-Guangzhou/XN05586/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627723 A/Guangdong/0024/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627667 A/Guangdong-Guangzhou/XN02778/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627651 A/Guangdong-Guangzhou/XN00588/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602474 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602142 A/chicken/Jiangxi/18955/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602124 A/chicken/Jiangxi/18474/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI602090 A/chicken/Jiangxi/20471/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601956 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601928 A/chicken/Jiangxi/23786/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601919 A/chicken/Jiangxi/23241/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601891 A/chicken/Jiangxi/1271/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601880 A/chicken/Jiangxi/36242/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601813 A/chicken/Jiangxi/36266/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601580 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601552 A/chicken/Jiangxi/36240/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601526 A/chicken/Jiangxi/20420/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601506 A/chicken/Jiangxi/36278/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601310 A/chicken/Jiangxi/1247/2014 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI601235 A/duck/Jiangxi/36477/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600086 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600079 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI600072 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599820 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599760 A/chicken/Jiangxi/31872/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 827/839 (98%) EPI599746 A/chicken/Jiangxi/30772/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599739 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599583 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599562 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599555 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599548 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599527 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599520 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599513 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI599506 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Isolate name: A/Yunnan/0127/2015 Isolate ID: EPI_ISL_195294 Passage details/history: passage details: E1 Type: A / H5N6 Lineage: Sample information Collection date: 2015-02-06 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China Additional location information: Patient age: Gender: Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: Other Database Import Sample ID given by the submitting laboratory: Authors: Xia,X.; Zhang,Y.; Yang,Z.; Guan,W.; Yuan,B.; Feng,Y.; Wang,Y.; Song,Y.; Li,Z.; Zhong,N.; Li,S. Address: Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: passage details: E1 Sequence segment identifier length accession # INSDC Sequence PB2 A/Yunnan/0127/2015 2280 EPI641404 KT245150 PB1 A/Yunnan/0127/2015 2274 EPI641403 KT245149 PA A/Yunnan/0127/2015 2151 EPI641342 KT245148 HA A/Yunnan/0127/2015 1701 EPI641398 KT245143 NP A/Yunnan/0127/2015 1497 EPI641401 KT245146 NA A/Yunnan/0127/2015 1380 EPI641400 KT245145 MP A/Yunnan/0127/2015 982 EPI641399 KT245144 NS A/Yunnan/0127/2015 849 EPI641402 KT245147 Submitter information Submitter: , EpiFluDB Submission Date: 2015-07-06 Last modifier: Pohlmann, Anne (EpiFlu Data Curator) Last modified: 2015-08-02
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI641398 A/Yunnan/0127/2015 (A/H5N6) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%) EPI668887 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%) EPI587629 A/Yunnan/14564/2015 (A/H5N6) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%) EPI587621 A/Yunnan/14563/2015 (A/H5N6) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%) EPI668863 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI587534 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%) EPI668743 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI587558 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%) EPI587542 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 4 (HA) 3118.3 0.000000e+00 1696/1701 (99%) EPI668879 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI668871 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI658743 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI657658 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI587574 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI587550 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%) EPI659159 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI658711 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI658695 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI658687 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI658031 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657666 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657650 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI657642 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%) EPI668855 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 4 (HA) 3105.3 0.000000e+00 1694/1701 (99%) EPI691535 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI664605 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI658007 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI657834 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI657706 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI657698 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI656874 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI641396 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%) EPI657690 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 4 (HA) 3101.6 0.000000e+00 1693/1700 (99%) EPI658871 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3099.8 0.000000e+00 1692/1699 (99%) EPI657802 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3099.8 0.000000e+00 1696/1704 (99%) EPI657514 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3099.8 0.000000e+00 1696/1704 (99%) EPI659103 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 4 (HA) 3094.3 0.000000e+00 1695/1704 (99%) EPI668895 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI668815 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI668807 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI668799 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%) EPI664565 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 4 (HA) 3088.7 0.000000e+00 1694/1704 (99%) EPI664541 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 4 (HA) 3088.7 0.000000e+00 1694/1704 (99%) EPI668847 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%) EPI656778 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 4 (HA) 3081.3 0.000000e+00 1680/1686 (99%) EPI657634 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 4 (HA) 3079.5 0.000000e+00 1689/1699 (99%) EPI550768 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3055.5 0.000000e+00 1688/1704 (99%) EPI550763 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 3055.5 0.000000e+00 1688/1704 (99%) EPI550759 A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA) 3055.5 0.000000e+00 1688/1704 (99%) EPI550757 A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA) 3055.5 0.000000e+00 1688/1704 (99%) EPI550752 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA) 3049.9 0.000000e+00 1687/1704 (99%) EPI691534 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 4 (HA) 3037.0 0.000000e+00 1683/1702 (98%) EPI641394 A/chicken/Yunnan/22/2015 (A/H5N6) segment 4 (HA) 3037.0 0.000000e+00 1683/1702 (98%) EPI599662 A/goose/Shantou/1806/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI599655 A/goose/Shantou/1791/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI599648 A/goose/Shantou/1763/2014 (A/H5N6) segment 4 (HA) 3016.7 0.000000e+00 1681/1704 (98%) EPI687498 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1681/1705 (98%) EPI656626 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI602412 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI602045 A/chicken/Dongguan/2818/2013 (A/H0) segment 4 (HA) 3011.2 0.000000e+00 1680/1704 (98%) EPI691533 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%) EPI641392 A/chicken/Yunnan/19/2015 (A/H5N6) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%) EPI656602 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 3005.6 0.000000e+00 1679/1704 (98%) EPI602419 A/chicken/Dongguan/3363/2013 (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI599346 A/chicken/Dongguan/4259/2013 (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI599292 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 4 (HA) 3000.1 0.000000e+00 1678/1704 (98%) EPI736914 A/Changsha/1/2014 (A/H5N6) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%) EPI602028 A/chicken/Dongguan/4190/2013 (A/H0) segment 4 (HA) 2996.4 0.000000e+00 1677/1704 (98%) EPI703600 A/goose/Eastern China/S0513/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI656650 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599339 A/duck/Dongguan/3069/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599320 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599313 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI599299 A/chicken/Shenzhen/1395/2013 (A/H5N6) segment 4 (HA) 2994.5 0.000000e+00 1677/1704 (98%) EPI681296 A/chicken/Zhejiang/727155/2014 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1677/1705 (98%) EPI656658 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI656642 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI656634 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI602491 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI601941 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599333 A/silkie chicken/Dongguan/2809/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI599327 A/duck/Dongguan/2685/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2989.0 0.000000e+00 1676/1704 (98%) EPI839147 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI681295 A/chicken/Zhejiang/727026/2014 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI681294 A/chicken/Zhejiang/727022/2014 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI681284 A/chicken/Zhejiang/727159/2014 (A/H5N2) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI681283 A/chicken/Zhejiang/727079/2014 (A/H5N2) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI661663 A/goose/Shandong/02.26 GD/2015(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1676/1705 (98%) EPI656722 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI602477 A/chicken/Shenzhen/715/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI599285 A/chicken/Shenzhen/433/2013 (A/H5N6) segment 4 (HA) 2983.5 0.000000e+00 1675/1704 (98%) EPI645049 A/swine/Guangdong/1/2014 (A/H5N6) segment 4 (HA) 2981.6 0.000000e+00 1674/1703 (98%) EPI768621 A/chicken/Wuxi/SC7393/2015(H5N6) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI681287 A/goose/Zhejiang/727110/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI657498 A/environment/Jilin/04.25 NA004/2015(H5N6) (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1675/1705 (98%) EPI645982 A/chicken/Jiangsu/WXS7393/2014 (A/H5N6) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%) EPI602103 A/chicken/Shenzhen/2072/2013 (A/H0) segment 4 (HA) 2977.9 0.000000e+00 1674/1704 (98%)
niman Posted December 11, 2016 Author Report Posted December 11, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI668886 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI641400 A/Yunnan/0127/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587628 A/Yunnan/14564/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI587620 A/Yunnan/14563/2015 (A/H5N6) segment 6 (NA) 2549.5 0.000000e+00 1380/1380 (100%) EPI691537 A/environment/Yunnan/YN19/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668878 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI668742 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI587557 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 6 (NA) 2544.0 0.000000e+00 1379/1380 (99%) EPI691543 A/environment/Yunnan/YN22/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668862 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI668853 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658710 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI658030 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI657641 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI587533 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%) EPI659158 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657833 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657665 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI657649 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI656777 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2536.6 0.000000e+00 1377/1379 (99%) EPI659102 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2534.7 0.000000e+00 1376/1378 (99%) EPI691550 A/environment/Yunnan/YN25/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI668870 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI664604 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI658694 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657705 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657697 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657689 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI657633 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI641397 A/chicken/Yunnan/25A/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587549 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1377/1380 (99%) EPI587541 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 6 (NA) 2532.9 0.000000e+00 1376/1380 (99%) EPI664564 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658686 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI658006 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 6 (NA) 2531.0 0.000000e+00 1376/1379 (99%) EPI656873 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 6 (NA) 2527.3 0.000000e+00 1376/1380 (99%) EPI657657 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 6 (NA) 2525.5 0.000000e+00 1375/1379 (99%) EPI587573 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 6 (NA) 2523.6 0.000000e+00 1376/1380 (99%) EPI668814 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI664540 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657801 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI657513 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641395 A/chicken/Yunnan/22/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI641393 A/chicken/Yunnan/19/2015 (A/H5N6) segment 6 (NA) 2521.8 0.000000e+00 1375/1380 (99%) EPI658742 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2516.3 0.000000e+00 1372/1377 (99%) EPI668894 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668846 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI668806 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 6 (NA) 2510.7 0.000000e+00 1373/1380 (99%) EPI602414 A/chicken/Dongguan/2690/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI601944 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI599294 A/chicken/Shenzhen/552/2013 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI530056 A/duck/Jiangxi/95/2014 (A/H5N6) segment 6 (NA) 2505.2 0.000000e+00 1372/1380 (99%) EPI839149 A/Gallinula chloropus/Guangdong/GZ174/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI687500 A/Goose/ Guangdong /JG125/2013（H5N6） (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI668797 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656721 A/duck/Hunan/12.07 YGK098-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI602493 A/chicken/Shenzhen/2269/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI599322 A/chicken/Shenzhen/2464/2013 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550765 A/duck/Laos/XBY004/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI550754 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 6 (NA) 2499.6 0.000000e+00 1371/1380 (99%) EPI656601 A/chicken/Hunan/12.28 YYGK034-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2497.8 0.000000e+00 1370/1379 (99%) EPI656657 A/duck/Hunan/12.07 YYGK113-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI656641 A/duck/Hunan/12.07 YYGK111-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI601070 A/chicken/Jiangxi/13259/2014 (A/H0) segment 6 (NA) 2494.1 0.000000e+00 1371/1381 (99%) EPI599315 A/chicken/Shenzhen/2396/2013 (A/H5N6) segment 6 (NA) 2494.1 0.000000e+00 1370/1380 (99%) EPI658870 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 6 (NA) 2492.3 0.000000e+00 1355/1358 (99%) EPI656649 A/duck/Hunan/12.07 YYGK112-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI656633 A/duck/Hunan/12.07 YYGK110-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI656625 A/duck/Hunan/12.07 YYGK108-P/2013(H5N6) (A/H5N6) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI602319 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602312 A/chicken/Jiangxi/13201/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602305 A/chicken/Jiangxi/13199/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602298 A/chicken/Jiangxi/13197/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602274 A/chicken/Jiangxi/13238/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602267 A/chicken/Jiangxi/13235/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602260 A/chicken/Jiangxi/13231/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602253 A/chicken/Jiangxi/13221/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602236 A/chicken/Jiangxi/13264/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602229 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602222 A/chicken/Jiangxi/13251/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602208 A/chicken/Jiangxi/13247/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602201 A/chicken/Jiangxi/13241/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602155 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI602048 A/chicken/Dongguan/2818/2013 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1369/1380 (99%) EPI601464 A/chicken/Jiangxi/13211/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601453 A/chicken/Jiangxi/13198/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601443 A/chicken/Jiangxi/13196/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601406 A/chicken/Jiangxi/13253/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601394 A/chicken/Jiangxi/13237/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601342 A/chicken/Jiangxi/13272/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601197 A/chicken/Jiangxi/13216/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601190 A/chicken/Jiangxi/13215/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601180 A/chicken/Jiangxi/13212/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601171 A/chicken/Jiangxi/13206/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601162 A/chicken/Jiangxi/13204/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601152 A/chicken/Jiangxi/13246/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601126 A/chicken/Jiangxi/13228/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601117 A/chicken/Jiangxi/13219/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601099 A/chicken/Jiangxi/13271/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%) EPI601080 A/chicken/Jiangxi/13260/2014 (A/H0) segment 6 (NA) 2488.6 0.000000e+00 1370/1381 (99%)
niman Posted December 12, 2016 Author Report Posted December 12, 2016 Align Segment-ID Name Score E-Value Identity EPI641399 A/Yunnan/0127/2015 (A/H5N6) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI668881 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI668865 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI668857 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI668849 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI668738 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI664560 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI664536 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI658738 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI658690 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI658682 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI658002 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657797 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657701 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657685 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657653 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657645 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657637 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657629 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI657509 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587624 A/Yunnan/14564/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587616 A/Yunnan/14563/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587553 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587545 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587537 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI587529 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI658866 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1788.7 0.000000e+00 970/971 (99%) EPI668890 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI668873 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI668841 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI668813 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI664600 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI659154 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI659098 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI658706 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI658026 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI657693 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI657661 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI587569 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 7 (MP) 1786.8 0.000000e+00 977/982 (99%) EPI668804 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI668798 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI657829 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI656773 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1768.4 0.000000e+00 965/969 (99%) EPI656869 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 7 (MP) 1766.5 0.000000e+00 958/959 (99%) EPI838142 A/chicken/Guangdong/SIC17/2014 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI596715 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI583836 A/chicken/Suzhou/4957/2013 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI497543 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI497530 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI838124 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI680983 A/chicken/Zhejiang/3C19/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI591974 A/chicken/Suzhou/4833/2013 (A/H0) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI583829 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI568615 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI515841 A/Chicken/Nantong/031-2/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI515833 A/Chicken/Nanjing/023/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI510437 A/chicken/Bangladesh/15083/2012 (A/H5N1) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI510421 A/chicken/Bangladesh/15079/2012 (A/H5N1) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470069 A/chicken/Rizhao/1313/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470066 A/chicken/Rizhao/723/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470064 A/chicken/Rizhao/437/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470063 A/chicken/Rizhao/249/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470062 A/chicken/Rizhao/85/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI470060 A/chicken/Rizhao/15/2013 (A/H9N2) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI658458 A/environment/Jiangxi/05.07 NCJD0095C/2015(H5N6) (A/H5N6) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
niman Posted December 12, 2016 Author Report Posted December 12, 2016 Descriptions Align Segment-ID Name Score E-Value Identity EPI641404 A/Yunnan/0127/2015 (A/H5N6) segment 1 (PB2) 4207.8 0.000000e+00 2280/2280 (100%) EPI587618 A/Yunnan/14563/2015 (A/H5N6) segment 1 (PB2) 4196.7 0.000000e+00 2277/2280 (99%) EPI668885 A/Yunnan/DQ001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2276/2280 (99%) EPI587626 A/Yunnan/14564/2015 (A/H5N6) segment 1 (PB2) 4193.0 0.000000e+00 2276/2280 (99%) EPI668867 A/environment/Yunnan/02.09 DQXY009-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI668851 A/environment/Yunnan/02.09 DQWGH013-2E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI668739 A/chicken/Yunnan/02.09 DQXY008L/2015(H5N6) (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI587555 A/Environment/Yunnan/DQ16/2015 (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI587547 A/Environment/Yunnan/DQ9/2015 (A/H5N6) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%) EPI587539 A/Environment/Yunnan/DQ8/2015 (A/H5N6) segment 1 (PB2) 4187.5 0.000000e+00 2275/2280 (99%) EPI668877 A/environment/Yunnan/02.10 DQXY053-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4185.6 0.000000e+00 2275/2280 (99%) EPI668861 A/environment/Yunnan/02.09 DQXY005-1E/2015(H5N6) (A/H5N6) segment 1 (PB2) 4185.6 0.000000e+00 2275/2280 (99%) EPI587571 A/Environment/Yunnan/DQ53/2015 (A/H5N6) segment 1 (PB2) 4185.6 0.000000e+00 2275/2280 (99%) EPI587531 A/Environment/Yunnan/DQ5/2015 (A/H5N6) segment 1 (PB2) 4185.6 0.000000e+00 2275/2280 (99%) EPI657799 A/chicken/Jiangxi/05.06 NCDZT1174-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4183.8 0.000000e+00 2274/2279 (99%) EPI657511 A/chicken/Yunnan/03.16 DQXYL0034-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4183.8 0.000000e+00 2274/2279 (99%) EPI658740 A/chicken/Yunnan/03.16 DQXYL023-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4181.9 0.000000e+00 2273/2278 (99%) EPI659156 A/duck/Yunnan/03.15 DQXYL007-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4180.1 0.000000e+00 2274/2280 (99%) EPI658708 A/duck/Yunnan/03.16 DQXYL0013-O/2015 (A/H5N6) segment 1 (PB2) 4178.2 0.000000e+00 2273/2279 (99%) EPI657655 A/environment/Yunnan/03.15 DQWGH014/2015(H5N6) (A/H5N6) segment 1 (PB2) 4170.9 0.000000e+00 2271/2278 (99%) EPI664538 A/duck/Yunnan/03.16 DQXYL007-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4169.0 0.000000e+00 2270/2277 (99%) EPI664602 A/duck/Hunan/04.14 YYGK0453-1-O/2015(Mixed) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI664562 A/environment/Yunnan/03.15 DQWGH008-Z/2015(Mixed) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI658028 A/environment/Yunnan/03.17 DQJT040/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI657703 A/environment/Yunnan/03.15 DQWGH008-1/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI657695 A/environment/Yunnan/03.15 DQWGH004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI657687 A/environment/Yunnan/03.15 DQWGH017/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI657663 A/environment/Yunnan/03.17 DQJT039/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI657639 A/environment/Yunnan/03.15 DQWGH010/2015(H5N6) (A/H5N6) segment 1 (PB2) 4167.2 0.000000e+00 2271/2279 (99%) EPI658004 A/environment/Yunnan/03.15 DQWGH001/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2270/2278 (99%) EPI657647 A/environment/Yunnan/03.15 DQWGH011-2/2015(H5N6) (A/H5N6) segment 1 (PB2) 4165.3 0.000000e+00 2270/2278 (99%) EPI668891 A/Yunnan/DQ002/2015(H5N6) (A/H5N6) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI668795 A/environment/Yunnan/07.11 DQENM015/2015(H5N6) (A/H5N6) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI658692 A/chicken/Yunnan/03.15 DQXYL0073-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4163.5 0.000000e+00 2271/2280 (99%) EPI659100 A/chicken/Yunnan/03.16 DQXYL0063-Z-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4161.6 0.000000e+00 2267/2274 (99%) EPI658684 A/chicken/Yunnan/03.16 DQJT0068-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4161.6 0.000000e+00 2270/2279 (99%) EPI668800 A/environment/Yunnan/07.11 DQENM006/2015(H5N6) (A/H5N6) segment 1 (PB2) 4157.9 0.000000e+00 2270/2280 (99%) EPI657631 A/environment/Yunnan/03.15 DQWGH012/2015(H5N6) (A/H5N6) segment 1 (PB2) 4156.1 0.000000e+00 2269/2279 (99%) EPI656775 A/duck/Hunan/01.16 YYGK0204-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4156.1 0.000000e+00 2270/2280 (99%) EPI657831 A/chicken/Jiangxi/04.01 NCJD0137-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4150.5 0.000000e+00 2268/2279 (99%) EPI658868 A/duck/Hunan/02.07 YYFQHY19Y-O/2015(H5N6) (A/H5N6) segment 1 (PB2) 4148.7 0.000000e+00 2264/2273 (99%) EPI668808 A/environment/Yunnan/07.11 DQENM004/2015(H5N6) (A/H5N6) segment 1 (PB2) 4146.8 0.000000e+00 2268/2280 (99%) EPI656871 A/duck/Hunan/02.26 YYGK265-P/2014(H5N6) (A/H5N6) segment 1 (PB2) 4130.2 0.000000e+00 2263/2276 (99%) EPI668844 A/environment/Yunnan/07.11 DQXY20/2015(H5N6) (A/H5N6) segment 1 (PB2) 4085.9 0.000000e+00 2258/2281 (98%) EPI654178 A/Environment/GD-ZS_44/H9N2/2013-4 (A/H9N2) segment 1 (PB2) 4008.4 0.000000e+00 2241/2277 (98%) EPI583591 A/chicken/Dongguan/2827/2013 (A/H9N2) segment 1 (PB2) 4002.8 0.000000e+00 2242/2280 (98%) EPI583619 A/chicken/Dongguan/3056/2013 (A/H9N2) segment 1 (PB2) 3997.3 0.000000e+00 2241/2280 (98%) EPI654167 A/Environment/GD-YJ_25005/H9N2/2013 (A/H9N2) segment 1 (PB2) 3991.7 0.000000e+00 2238/2277 (98%) EPI583723 A/chicken/Dongguan/4254/2013 (A/H0) segment 1 (PB2) 3991.7 0.000000e+00 2240/2280 (98%) EPI583549 A/chicken/Shenzhen/2403/2013 (A/H9N2) segment 1 (PB2) 3991.7 0.000000e+00 2240/2280 (98%) EPI837990 A/chicken/Guangdong/SIC23/2014 (A/H9N2) segment 1 (PB2) 3986.2 0.000000e+00 2239/2280 (98%) EPI583675 A/chicken/Shenzhen/3745/2013 (A/H9N2) segment 1 (PB2) 3986.2 0.000000e+00 2239/2280 (98%) EPI628533 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 1 (PB2) 3980.7 0.000000e+00 2238/2280 (98%) EPI837954 A/chicken/Guangdong/SIC14/2013 (A/H9N2) segment 1 (PB2) 3977.0 0.000000e+00 2237/2280 (98%) EPI583661 A/chicken/Dongguan/3550/2013 (A/H9N2) segment 1 (PB2) 3975.1 0.000000e+00 2237/2280 (98%) EPI583500 A/chicken/Shenzhen/1799/2013 (A/H9N2) segment 1 (PB2) 3975.1 0.000000e+00 2237/2280 (98%) EPI583703 A/silkie chicken/Dongguan/4184/2013 (A/H9N2) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI583444 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 1 (PB2) 3958.5 0.000000e+00 2234/2280 (97%) EPI837953 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI628493 A/Guangdong/02124/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI628093 A/Guangdong/0012/2014 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI627054 A/Guangdong/15SF051/2015 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI503496 A/Huizhou/01/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI476698 A/Guangdong/1/2013 (A/H7N9) segment 1 (PB2) 3930.8 0.000000e+00 2229/2280 (97%) EPI656399 A/GD-51/2015/H7N9/2015-01-30 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI655883 A/GD-13/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI655875 A/GD-12/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2226/2277 (97%) EPI628509 A/Guangdong/24999/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628485 A/Guangdong/02125/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI628421 A/Guangdong/037/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627981 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627973 A/Guangdong/0081/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI627742 A/Guangdong/0010/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI602023 A/chicken/Dongguan/4190/2013 (A/H0) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI597437 A/chicken/Dongguan/1009/2014 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI597143 A/chicken/Dongguan/1670/2014 (A/H0) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI597129 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI596868 A/silkie chicken/Dongguan/952/2014 (A/H0) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581995 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581920 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581905 A/chicken/Dongguan/3972/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581877 A/chicken/Dongguan/3894/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581760 A/silkie chicken/Dongguan/3528/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581754 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581748 A/silkie chicken/Dongguan/3525/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581729 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581722 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581690 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581641 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581634 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581620 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI581613 A/chicken/Dongguan/3112/2013 (A/H7N9) segment 1 (PB2) 3925.3 0.000000e+00 2228/2280 (97%) EPI656495 A/GD-95/2015/H7N9/2015-03-05 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2225/2277 (97%) EPI656439 A/GD-68/2015/H7N9/2015-02-08 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2225/2277 (97%) EPI656027 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2225/2277 (97%) EPI655891 A/GD-18/2014/H7N9/2014-01-07 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2225/2277 (97%) EPI655867 A/GD-10/2014/H7N9/2014-01-03 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2225/2277 (97%) EPI628525 A/environment/Guangdong/25003/2013 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI628501 A/Guangdong/02620/2014 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%) EPI628469 A/Guangdong/035/2014 (A/H7N9) segment 1 (PB2) 3919.7 0.000000e+00 2227/2280 (97%)
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