niman Posted January 20, 2017 Report Share Posted January 20, 2017 CHP has release a full H7N9 sequence (at GISAID) from 10M, A/Hong Kong/214/2017 Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Isolate name: A/Hong Kong/214/2017 Isolate ID: EPI_ISL_242275 Passage details/history: MDCK Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-09 Host Human Additional host information: Zip code: Patient status: In-patient Last vaccinated: In-vivo pathogenicity test: Location: Hong Kong (SAR) Additional location information: Patient age: 10 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Nasopharyngeal Institute information Originating lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the sample provider: Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Submitting lab: Public Health Laboratory Services Branch, Centre for Health Protection Sample ID given by the submitting laboratory: VB17005301 Authors: Mak,G.C.; Lo,J.Y.C. Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A/Hong Kong/214/2017_s1 2280 EPI884219 PB1 A/Hong Kong/214/2017_s2 2274 EPI884220 PA A/Hong Kong/214/2017_s3 2151 EPI884218 HA A/Hong Kong/214/2017_s4 1683 EPI884222 NP A/Hong Kong/214/2017_s5 1497 EPI884215 NA A/Hong Kong/214/2017_s6 1398 EPI884221 MP A/Hong Kong/214/2017_s7 982 EPI884217 NS A/Hong Kong/214/2017_s8 838 EPI884216 Submitter information Submitter: Mak, Gannon Submission Date: 2017-01-20 Last modifier: Mak, Gannon Last modified: 2017-01-20 Address: Public Health Laboratory Services Branch, Centre for Health Protection Virology Division Kowloon Hong Kong Hong Kong (SAR) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Imported human case of avian influenza A(H7N9) confirmed ********************************************* The Centre for Health Protection (CHP) of the Department of Health today (January 11) reported that the suspected imported human case of avian influenza A(H7) affecting a boy aged 10 last night (January 10) has been laboratory confirmed. This is the fourth human H7N9 case in Hong Kong this winter. His nasopharyngeal aspirate tested positive for influenza A(H7N9) virus upon laboratory testing by the CHP's Public Health Laboratory Services Branch. Contact tracing has so far identified 27 close contacts and 70 other contacts. Close contacts are the patient's family and school contacts as well as relevant in-patients and visitors of Princess Margaret Hospital (PMH). All have remained asymptomatic. They will be given antiviral prophylaxis with oseltamivir (Tamiflu) for five days, advised to wear a mask and put under medical surveillance for 10 days following their last exposure to the patient. Other contacts include the patient's school contacts, healthcare workers (HCWs) of North Lantau Hospital and PMH and ambulance personnel involved in patient transfer. Four HCWs of PMH have mild symptoms. Two of them tested negative for influenza A and two are pending testing. The others have remained asymptomatic. They will be advised to wear a mask and will be put under medical surveillance for 10 days following their last exposure to the patient. From 2013 to date, 20 imported human H7N9 cases, including 13 males and seven females aged from 5 months to 85 years (median: 66.5 years), have been confirmed in Hong Kong, with seven deaths (35 per cent). "In view of the upcoming Lunar New Year holidays, adults and parents should look after children with extra care in personal, hand, food and environmental hygiene against infections during travel," a spokesman for the CHP said. "We strongly urge the public to avoid touching birds, poultry or their droppings and visiting poultry markets or farms during travel. If feeling unwell, such as having a fever or cough, wear a mask and seek medical advice at once. Travellers returning from affected areas should consult doctors promptly if symptoms develop, and actively inform the doctors of their travel history for prompt diagnosis and treatment," the spokesman said. In addition, the CHP is closely monitoring an additional human H7N9 case in Shanghai. According to the Shanghai Municipal Commission of Health and Family Planning, the patient is a man aged 60 from Hubei. "While local surveillance, prevention and control measures are in place, we will remain vigilant and work closely with the World Health Organization and relevant health authorities to monitor the latest developments," the spokesman said. As the H7N9 virus continues to be detected in animals and environments in the Mainland, additional human cases are expected in affected and possibly neighbouring areas. In view of the heavy trade and travel between the Mainland and Hong Kong, further sporadic imported human cases in Hong Kong every now and then are expected, especially in the coming few months. Ends/Wednesday, January 11, 2017 Issued at HKT 19:40 http://www.info.gov.hk/gia/general/201701/11/P2017011100831.htm Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884222 A/Hong Kong/214/2017 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%) EPI627209 A/Guangdong/15SF002/2015 (A/H7N9) segment 4 (HA) 3005.6 0.000000e+00 1664/1683 (98%) EPI580363 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 4 (HA) 2992.7 0.000000e+00 1662/1683 (98%) EPI628648 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1662/1684 (98%) EPI626993 A/Guangdong/15SF082/2015 (A/H7N9) segment 4 (HA) 2987.2 0.000000e+00 1662/1684 (98%) EPI627057 A/Guangdong/15SF051/2015 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627721 A/Guangdong-Guangzhou/XN08664/2014 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%) EPI601940 A/chicken/Dongguan/1100/2014 (A/H0) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597584 A/chicken/Dongguan/1421/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597453 A/chicken/Dongguan/1124/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597446 A/chicken/Dongguan/1022/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597427 A/silkie chicken/Dongguan/986/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597421 A/silkie chicken/Dongguan/981/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI597160 A/chicken/Dongguan/1091/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI592201 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI592186 A/Shenzhen/SP126/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI578139 A/silkie chicken/Dongguan/997/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI509880 A/Hong Kong/4495/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI627665 A/Guangdong-Guangzhou/XN00509/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI627649 A/Guangdong-Guangzhou/XN08423/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597399 A/silkie chicken/Dongguan/979/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597181 A/chicken/Dongguan/191/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597167 A/chicken/Dongguan/1108/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI597077 A/chicken/Dongguan/1506/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI596907 A/silkie chicken/Dongguan/988/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593237 A/chicken/Shantou/2562/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593216 A/chicken/Shantou/2546/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593202 A/chicken/Shantou/2538/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593195 A/chicken/Shantou/2537/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578119 A/chicken/Shantou/1556/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578112 A/chicken/Shantou/1554/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578105 A/chicken/Shantou/1552/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI578098 A/chicken/Shantou/1550/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI656282 A/GD-2/2015/H7N9/2015-01-06 (A/H7N9) segment 4 (HA) 2955.8 0.000000e+00 1636/1654 (98%) EPI628536 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597146 A/chicken/Dongguan/1670/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597132 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI597067 A/chicken/Dongguan/1505/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI596881 A/silkie chicken/Dongguan/959/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI596759 A/chicken/Dongguan/169/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593306 A/silkie chicken/Shantou/2056/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593300 A/silkie chicken/Shantou/2054/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593294 A/silkie chicken/Shantou/2050/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593230 A/chicken/Shantou/2556/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593223 A/chicken/Shantou/2550/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578224 A/chicken/Dongguan/1697/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578213 A/chicken/Dongguan/1693/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI578205 A/chicken/Dongguan/1690/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI516606 A/Hong Kong/8122430/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI516598 A/Hong Kong/5581/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI656330 A/GD-44/2015/H7N9/2015-01-19 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1635/1654 (98%) EPI656290 A/GD-10/2015/H7N9/2015-01-06 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1635/1654 (98%) EPI627761 A/Guangdong-Guangzhou/XN00429/2014 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1653/1683 (98%) EPI730495 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1655/1684 (98%) EPI627856 A/Hunan/26938/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627848 A/Hunan/26937/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627689 A/Guangdong-Guangzhou/XN15122/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627625 A/Guangdong-Guangzhou/XN14670/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI597033 A/silkie chicken/Dongguan/1451/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI596803 A/chicken/Dongguan/536/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593312 A/chicken/Shantou/3057/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593209 A/chicken/Shantou/2539/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI597021 A/silkie chicken/Dongguan/1449/2014 (A/H0) segment 4 (HA) 2942.8 0.000000e+00 1651/1683 (98%) EPI520864 A/Hong Kong/5731/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI656498 A/GD-95/2015/H7N9/2015-03-05 (A/H7N9) segment 4 (HA) 2939.1 0.000000e+00 1633/1654 (98%) EPI596919 A/chicken/Dongguan/1051/2014 (A/H7N9) segment 4 (HA) 2939.1 0.000000e+00 1650/1683 (98%) EPI708131 A/chicken/Guangdong/G1381/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1642/1668 (98%) EPI628096 A/Guangdong/0012/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI627633 A/Guangdong-Guangzhou/XN14050/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI593326 A/chicken/Shantou/4329/2014 (A/H0) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI593319 A/chicken/Shantou/4325/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI592193 A/Shenzhen/SP139/2014 (A/H7N9) segment 4 (HA) 2937.3 0.000000e+00 1652/1683 (98%) EPI708036 A/chicken/Guangdong/G1392/2014 (A/H7N9) segment 4 (HA) 2933.6 0.000000e+00 1644/1672 (98%) EPI628496 A/Guangdong/02124/2014 (A/H7N9) segment 4 (HA) 2933.6 0.000000e+00 1651/1683 (98%) EPI707946 A/chicken/Guangdong/G1381/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1641/1668 (98%) EPI628528 A/environment/Guangdong/25003/2013 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI627984 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI593355 A/chicken/Shantou/4833/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI593348 A/chicken/Shantou/4832/2014 (A/H7N9) segment 4 (HA) 2931.8 0.000000e+00 1651/1683 (98%) EPI509205 Influenza A Virus (A/Malaysia/228/2014(H7N9)) segment 4 hemagglutinin (HA) gene (A/H7N9) segment 4 (HA) 2929.9 0.000000e+00 1638/1664 (98%) EPI628472 A/Guangdong/035/2014 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI627273 A/Guangdong/15SF001/2015 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI627201 A/Guangdong/15SF017/2015 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1651/1684 (98%) EPI583318 A/chicken/Dongguan/4040/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI583249 A/Shenzhen/SP-W1/2014 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581984 A/silkie chicken/Dongguan/4128/2013 (A/H0) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581965 A/chicken/Dongguan/4114/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581958 A/chicken/Dongguan/4102/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581949 A/chicken/Dongguan/4094/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581942 A/chicken/Dongguan/4063/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581935 A/chicken/Dongguan/4048/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581907 A/chicken/Dongguan/3972/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581900 A/chicken/Dongguan/3945/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581886 A/chicken/Dongguan/3917/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581649 A/chicken/Dongguan/3219/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI581629 A/chicken/Dongguan/3145/2013 (A/H7N9) segment 4 (HA) 2926.2 0.000000e+00 1650/1683 (98%) EPI708039 A/chicken/Guangdong/G1521/2014 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1642/1672 (98%) EPI708038 A/chicken/Guangdong/G1519/2014 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1642/1672 (98%) EPI656442 A/GD-68/2015/H7N9/2015-02-08 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1630/1654 (98%) EPI656402 A/GD-51/2015/H7N9/2015-01-30 (A/H7N9) segment 4 (HA) 2922.5 0.000000e+00 1630/1654 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884221 A/Hong Kong/214/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI628647 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627208 A/Guangdong/15SF002/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI626992 A/Guangdong/15SF082/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI580365 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI627056 A/Guangdong/15SF051/2015 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI597535 A/chicken/Dongguan/1348/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI597008 A/chicken/Dongguan/1424/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI596988 A/chicken/Dongguan/1374/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI578165 A/chicken/Dongguan/1445/2014 (A/H0) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI601943 A/chicken/Dongguan/1100/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597586 A/chicken/Dongguan/1421/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597521 A/chicken/Dongguan/1314/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597504 A/chicken/Dongguan/1303/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597455 A/chicken/Dongguan/1124/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597429 A/silkie chicken/Dongguan/986/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597423 A/silkie chicken/Dongguan/981/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597401 A/silkie chicken/Dongguan/979/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597169 A/chicken/Dongguan/1108/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597162 A/chicken/Dongguan/1091/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597148 A/chicken/Dongguan/1670/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597134 A/silkie chicken/Dongguan/1644/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597079 A/chicken/Dongguan/1506/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597072 A/chicken/Dongguan/1505/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597056 A/silkie chicken/Dongguan/1473/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597048 A/chicken/Dongguan/1459/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597041 A/chicken/Dongguan/1456/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597035 A/silkie chicken/Dongguan/1451/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI597023 A/silkie chicken/Dongguan/1449/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596974 A/chicken/Dongguan/1297/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596921 A/chicken/Dongguan/1051/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596886 A/silkie chicken/Dongguan/959/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596805 A/chicken/Dongguan/536/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI596761 A/chicken/Dongguan/169/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593357 A/chicken/Shantou/4833/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593350 A/chicken/Shantou/4832/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593329 A/chicken/Shantou/4329/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593321 A/chicken/Shantou/4325/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593232 A/chicken/Shantou/2556/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593225 A/chicken/Shantou/2550/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI593197 A/chicken/Shantou/2537/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592203 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592195 A/Shenzhen/SP139/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI592188 A/Shenzhen/SP126/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578226 A/chicken/Dongguan/1697/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578218 A/chicken/Dongguan/1693/2014 (A/H0) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578187 A/chicken/Dongguan/1548/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578141 A/silkie chicken/Dongguan/997/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578114 A/chicken/Shantou/1554/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578107 A/chicken/Shantou/1552/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578100 A/chicken/Shantou/1550/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI578010 A/Shenzhen/SP62/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI516605 A/Hong Kong/8122430/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI509879 A/Hong Kong/4495/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI628535 A/Environment/Guangdong/47403/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI628527 A/environment/Guangdong/25003/2013 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI628015 A/Guangdong/0075/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627983 A/Environmental/Guangdong/00329/2013 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627855 A/Hunan/26938/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627847 A/Hunan/26937/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627760 A/Guangdong-Guangzhou/XN00429/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627720 A/Guangdong-Guangzhou/XN08664/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627696 A/Guangdong-Guangzhou/XN13392/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627648 A/Guangdong-Guangzhou/XN08423/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627632 A/Guangdong-Guangzhou/XN14050/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627064 A/Guangdong/15SF053/2015 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597448 A/chicken/Dongguan/1022/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597183 A/chicken/Dongguan/191/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI597155 A/chicken/Dongguan/1673/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593308 A/silkie chicken/Shantou/2056/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593302 A/silkie chicken/Shantou/2054/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593296 A/silkie chicken/Shantou/2050/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593239 A/chicken/Shantou/2562/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI593204 A/chicken/Shantou/2538/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI580277 A/Chicken/Guangdong/DG479/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI578121 A/chicken/Shantou/1556/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI566091 A/Guangdong/02496/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI516597 A/Hong Kong/5581/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI505123 A/silky_chicken/Hong_Kong/1772-3/2014 (A/H7N9) segment 6 (NA) 2433.2 0.000000e+00 1371/1398 (98%) EPI627664 A/Guangdong-Guangzhou/XN00509/2014 (A/H7N9) segment 6 (NA) 2431.3 0.000000e+00 1370/1398 (97%) EPI730494 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI656289 A/GD-10/2015/H7N9/2015-01-06 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1354/1374 (98%) EPI628711 A/Environment/Guangdong/22351/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI597567 A/chicken/Dongguan/1401/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI597545 A/chicken/Dongguan/1373/2014 (A/H0) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI596856 A/chicken/Dongguan/856/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI593314 A/chicken/Shantou/3057/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI593211 A/chicken/Shantou/2539/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI583279 A/Shenzhen/SP48/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580339 A/Environment/Guangdong/DG104/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580329 A/Duck/Guangdong/DG103/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580301 A/Chicken/Guangdong/DG593/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580293 A/Chicken/Guangdong/DG592/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI580285 A/Duck/Guangdong/DG527/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578207 A/chicken/Dongguan/1690/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578003 A/Shenzhen/SP75/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI566035 A/Guangdong/15SF018/2015 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI520863 A/Hong Kong/5731/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI507086 A/Hong Kong/3263/2014 (A/H7N9) segment 6 (NA) 2427.6 0.000000e+00 1370/1398 (97%) EPI578235 A/silkie chicken/Dongguan/1002/2014 (A/H0) segment 6 (NA) 2423.9 0.000000e+00 1369/1398 (97%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884217 A/Hong Kong/214/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI730490 A/Hong Kong/VB16049808/2016 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI843875 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 7 (MP) 1729.6 0.000000e+00 966/981 (98%) EPI838140 A/chicken/Guangxi/SIC19/2014 (A/H9N2) segment 7 (MP) 1720.4 0.000000e+00 965/982 (98%) EPI583470 A/chicken/Shenzhen/1544/2013 (A/H9N2) segment 7 (MP) 1716.7 0.000000e+00 964/982 (98%) EPI838129 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI682980 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI664544 A/duck/Hunan/03.09 YYFQH0036-P/2015(Mixed) (A/H5N6) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602131 A/chicken/Jiangxi/18926/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602123 A/chicken/Jiangxi/18474/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602081 A/chicken/Jiangxi/19982/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602070 A/chicken/Jiangxi/19967/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI602062 A/chicken/Jiangxi/19912/2013 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI601359 A/chicken/Jiangxi/1226/2014 (A/H0) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600106 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600092 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600085 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600078 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600071 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI600057 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599819 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599540 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599526 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599498 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599477 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599449 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599392 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI599184 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI589862 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI589854 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI583328 A/chicken/Shenzhen/317/2013 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI557786 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469991 A/chicken/Hong Kong/JV75/2011 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469990 A/chicken/Hong Kong/YU158/2011 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI469974 A/chicken/Hong Kong/FL96/2010 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%) EPI736588 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI692271 A/chicken/Shandong/WG18/2011 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI652908 A/chicken/Qingdao/017/2014 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602473 A/chicken/Jiangxi/5195/2014 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602320 A/chicken/Jiangxi/13205/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602230 A/chicken/Jiangxi/13258/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602216 A/chicken/Jiangxi/13249/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602163 A/chicken/Jiangxi/13274/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602156 A/chicken/Jiangxi/13266/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI602141 A/chicken/Jiangxi/18955/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601918 A/chicken/Jiangxi/23241/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601812 A/chicken/Jiangxi/36266/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601562 A/chicken/Jiangxi/36247/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601525 A/chicken/Jiangxi/20420/2013 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601454 A/chicken/Jiangxi/13198/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601407 A/chicken/Jiangxi/13253/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601396 A/chicken/Jiangxi/13237/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601385 A/chicken/Jiangxi/13232/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601379 A/chicken/Jiangxi/1243/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601343 A/chicken/Jiangxi/13272/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601268 A/chicken/Jiangxi/1269/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601243 A/chicken/Jiangxi/13203/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601198 A/chicken/Jiangxi/13216/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601191 A/chicken/Jiangxi/13215/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601182 A/chicken/Jiangxi/13212/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601172 A/chicken/Jiangxi/13206/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601163 A/chicken/Jiangxi/13204/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601153 A/chicken/Jiangxi/13246/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601146 A/chicken/Jiangxi/13244/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601127 A/chicken/Jiangxi/13228/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601118 A/chicken/Jiangxi/13219/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601101 A/chicken/Jiangxi/13271/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601089 A/chicken/Jiangxi/13262/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI601071 A/chicken/Jiangxi/13259/2014 (A/H0) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600270 A/chicken/Jiangxi/13263/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600263 A/chicken/Jiangxi/13256/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600249 A/chicken/Jiangxi/13242/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600228 A/chicken/Jiangxi/13214/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600214 A/chicken/Jiangxi/13202/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600200 A/chicken/Jiangxi/12782/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI600193 A/chicken/Jiangxi/12272/2014 (A/H10N6) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599777 A/chicken/Jiangxi/34609/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599766 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599702 A/chicken/Jiangxi/23259/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599561 A/chicken/Jiangxi/28601/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599547 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599505 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599484 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599470 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599456 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599428 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599421 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599414 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599406 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599399 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI599281 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594349 A/chicken/Jiangxi/10964/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594342 A/chicken/Jiangxi/10963/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594335 A/chicken/Jiangxi/10962/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594321 A/chicken/Jiangxi/10959/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594314 A/chicken/Jiangxi/10958/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594300 A/chicken/Jiangxi/10956/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594293 A/chicken/Jiangxi/10955/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594286 A/chicken/Jiangxi/10954/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) EPI594279 A/chicken/Jiangxi/10953/2014 (A/H7N9) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884219 A/Hong Kong/214/2017 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI844491 A/environment/Zhongshan/ZS201601/2016 (A/H9N2) segment 1 (PB2) 4137.6 0.000000e+00 2266/2279 (99%) EPI844493 A/environment/Zhongshan/ZS201603/2016 (A/H9N2) segment 1 (PB2) 4121.0 0.000000e+00 2263/2279 (99%) EPI874335 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 1 (PB2) 4111.8 0.000000e+00 2262/2280 (99%) EPI578196 A/chicken/Dongguan/1674/2014 (A/H9N2) segment 1 (PB2) 4021.3 0.000000e+00 2245/2279 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593590 A/chicken/Jiangxi/18526/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593568 A/chicken/Jiangxi/18523/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593502 A/chicken/Jiangxi/18491/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593420 A/chicken/Jiangxi/18466/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI593410 A/chicken/Jiangxi/18457/2014 (A/H0) segment 1 (PB2) 4015.7 0.000000e+00 2244/2279 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4010.2 0.000000e+00 2244/2280 (98%) EPI593518 A/chicken/Jiangxi/18500/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593482 A/chicken/Jiangxi/18486/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593443 A/chicken/Jiangxi/18470/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI593394 A/chicken/Jiangxi/18035/2014 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4010.2 0.000000e+00 2243/2279 (98%) EPI837987 A/chicken/Sichuan/SIC36/2014 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2243/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 4004.7 0.000000e+00 2242/2279 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2241/2279 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI683196 A/duck/Wuhan/WHYF14/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI623615 A/chicken/Hubei/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2242/2280 (98%) EPI593629 A/chicken/Jiangxi/19463/2014 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI593346 A/chicken/Shantou/4832/2014 (A/H7N9) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 3999.1 0.000000e+00 2241/2279 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 3997.3 0.000000e+00 2240/2279 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 3997.3 0.000000e+00 2240/2279 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2240/2279 (98%) EPI736582 A/Anser fabalis/Anhui/L139/2014 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI601613 A/chicken/Jiangxi/20420/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI596731 A/chicken/Jiangxi/29132/2013 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2241/2280 (98%) EPI593618 A/chicken/Jiangxi/19426/2014 (A/H0) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI593353 A/chicken/Shantou/4833/2014 (A/H7N9) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 3993.6 0.000000e+00 2240/2279 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884220 A/Hong Kong/214/2017 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI685603 A/Shenzhen/TH001/2015 (H5N6) (A/H5N6) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI684539 A/Shenzhen/1/2015 (A/H5N6) segment 2 (PB1) 4061.9 0.000000e+00 2249/2274 (98%) EPI654222 A/Environment/GD-GZ_791/H9N2/2014-10 (A/H9N2) segment 2 (PB1) 4054.5 0.000000e+00 2245/2270 (98%) EPI838028 A/chicken/Guangdong/SIC37/2015 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI691368 A/ Guangdong /SZ872/2015(H5N6) (A/H5N6) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI654438 A/Environment/GD-GZ_50/H9N2/2014-9 (A/H9N2) segment 2 (PB1) 4045.3 0.000000e+00 2242/2268 (98%) EPI596895 A/silkie chicken/Dongguan/978/2014 (A/H0) segment 2 (PB1) 4045.3 0.000000e+00 2246/2274 (98%) EPI654460 A/Environment/GD-CH_68/H9N2/2015-1 (A/H9N2) segment 2 (PB1) 4037.9 0.000000e+00 2242/2270 (98%) EPI838021 A/chicken/Guangdong/SIC28/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI837995 A/chicken/Guangdong/SIC31/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI583459 A/chicken/Shenzhen/1488/2013 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI583445 A/chicken/Shenzhen/1377/2013 (A/H9N2) segment 2 (PB1) 4030.5 0.000000e+00 2243/2274 (98%) EPI718497 A/chicken/Yuhang/1/2013 (A/H5N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI583409 A/chicken/Shenzhen/1036/2013 (A/H0) segment 2 (PB1) 4026.8 0.000000e+00 2240/2270 (98%) EPI583529 A/chicken/Shenzhen/2066/2013 (A/H9N2) segment 2 (PB1) 4025.0 0.000000e+00 2242/2274 (98%) EPI583376 A/chicken/Shenzhen/844/2013 (A/H9N2) segment 2 (PB1) 4025.0 0.000000e+00 2242/2274 (98%) EPI583416 A/chicken/Shenzhen/1047/2013 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI583690 A/chicken/Dongguan/3964/2013 (A/H9N2) segment 2 (PB1) 4019.4 0.000000e+00 2241/2274 (98%) EPI627974 A/Guangdong/0081/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI627782 A/Guangdong-Guangzhou/XN00175/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI626991 A/Guangdong/15SF082/2015 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI583353 A/chicken/Shenzhen/515/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI498035 A/Hong Kong/308/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI656028 A/GD-81/2014/H7N9/2014-01-30 (A/H7N9) segment 2 (PB1) 4015.7 0.000000e+00 2238/2270 (98%) EPI627950 A/Guangdong/0069/2014 (A/H7N9) segment 2 (PB1) 4013.9 0.000000e+00 2240/2274 (98%) EPI844499 A/environment/Zhongshan/ZS201506/2015 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI838005 A/chicken/Fujian/SIC13/2013 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) EPI680683 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI680681 A/pigeon/Zhejiang/P3/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI583383 A/chicken/Shenzhen/881/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI532296 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI468350 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI450829 A/quail/Hangzhou/35/2013 (A/H9N2) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI443657 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%) EPI583473 A/chicken/Shenzhen/1591/2013 (A/H9N2) segment 2 (PB1) 4002.8 0.000000e+00 2238/2274 (98%) EPI680690 A/chicken/Zhejiang/C493/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI680670 A/quail/Zhejiang/A1/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI627207 A/Guangdong/15SF002/2015 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI580361 A/Chicken/Guangdong/GZ068/2015 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI557660 A/duck/Zhejiang/D485/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI532330 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI443649 A/environment/Hangzhou/37/2013 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%) EPI656280 A/GD-2/2015/H7N9/2015-01-06 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI656068 A/GD-98/2014/H7N9/2014-02-06 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI656020 A/GD-69/2014/H7N9/2014-01-30 (A/H7N9) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI492269 A/environment/Zhejiang/13/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI492262 A/environment/Zhejiang/09/2013 (A/H9N2) segment 2 (PB1) 3999.1 0.000000e+00 2235/2270 (98%) EPI628646 A/Environment/Guangdong/21123/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI580353 A/Environment/Guangdong/DG127/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI580345 A/Chicken/Guangdong/DG120/2015 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI446456 A/Hangzhou/3/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%) EPI656328 A/GD-44/2015/H7N9/2015-01-19 (A/H7N9) segment 2 (PB1) 3993.6 0.000000e+00 2234/2270 (98%) EPI654304 A/Environment/GD-ZQ_499/H9N2/2014-12 (A/H9N2) segment 2 (PB1) 3993.6 0.000000e+00 2235/2271 (98%) EPI838027 A/chicken/Guangdong/SIC41/2015 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI838013 A/chicken/Guangdong/SIC1/2012 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI838009 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI764809 A/chicken/Beijing/11/2013 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI654325 A/Environment/GD-QY_71/H9N2/2014-4 (A/H9N2) segment 2 (PB1) 3989.9 0.000000e+00 2232/2268 (98%) EPI627519 A/fujian/16/2014 (A/H7N9) segment 2 (PB1) 3989.9 0.000000e+00 2236/2274 (98%) EPI654409 A/Environment/GD-YF_233/H9N2/2014-7 (A/H9N2) segment 2 (PB1) 3988.0 0.000000e+00 2233/2270 (98%) EPI654320 A/Environment/GD-MZ_308/H9N2/2014-4 (A/H9N2) segment 2 (PB1) 3982.5 0.000000e+00 2232/2270 (98%) EPI844498 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI838031 A/chicken/Guangdong/SIC38/2015 (A/H9N2) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI457763 A/chicken/Zhejiang/SD007/2013 (A/H7N9) segment 2 (PB1) 3978.8 0.000000e+00 2234/2274 (98%) EPI580325 A/Duck/Guangdong/DG103/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580289 A/Chicken/Guangdong/DG592/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580281 A/Duck/Guangdong/DG527/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580273 A/Chicken/Guangdong/DG479/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI580265 A/Chicken/Guangdong/DG478/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566670 A/Hong Kong/8130773/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566090 A/Guangdong/02496/2014 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI566034 A/Guangdong/15SF018/2015 (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI468344 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI443673 A/environment/Hangzhou/109-1/2013(H7N9) (A/H7N9) segment 2 (PB1) 3973.3 0.000000e+00 2233/2274 (98%) EPI656296 A/GD-18/2015/H7N9/2015-01-11 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2230/2270 (98%) EPI831454 A/GD-155/2014/H7N9/2014-11-19 (A/H7N9) segment 2 (PB1) 3969.6 0.000000e+00 2230/2270 (98%) EPI627271 A/Guangdong/15SF001/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580335 A/Environment/Guangdong/DG104/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580311 A/Chicken/Guangdong/HZ098/2015 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI580297 A/Chicken/Guangdong/DG593/2014 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI553468 A/Hong Kong/8194273/2014 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI423865 A/brambling/Beijing/16/2012 (A/H9N2) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%) EPI656272 A/GD-1/2015/H7N9/2015-01-03 (A/H7N9) segment 2 (PB1) 3965.9 0.000000e+00 2229/2270 (98%) EPI656504 A/GD-120/2015/H7N9/2015-03-10 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2229/2270 (98%) EPI572937 A/chicken/Beijing/0512/2013 (A/H9N2) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI568782 A/chicken/Liaoning/1116/2012 (A/H9N2) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI559415 A/Hong Kong/2550/2015 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%) EPI628710 A/Environment/Guangdong/22351/2015 (A/H7N9) segment 2 (PB1) 3956.6 0.000000e+00 2230/2274 (98%) EPI656360 A/GD-42/2015/H7N9/2015-01-25 (A/H7N9) segment 2 (PB1) 3954.8 0.000000e+00 2227/2270 (98%) EPI654258 A/Environment/GD-MM_281/H9N2/2014-11 (A/H9N2) segment 2 (PB1) 3954.8 0.000000e+00 2227/2270 (98%) EPI760085 A/environment/Guangdong/01.01 SZSGXJK006-E/2016 (A/H5N6) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI568781 A/chicken/Shandong/qd0312/2013 (A/H9N2) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI532348 A/chicken/Zhejiang/C11/2013 (A/H9N9) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI450848 A/Hangzhou/327/2013 (A/H7N9) segment 2 (PB1) 3945.6 0.000000e+00 2228/2274 (97%) EPI572924 A/chicken/Shandong/lc0903/2013 (A/H9N2) segment 2 (PB1) 3934.5 0.000000e+00 2226/2274 (97%) EPI845706 A/chicken/Shandong/903/2013 (A/H9N2) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%) EPI656496 A/GD-95/2015/H7N9/2015-03-05 (A/H7N9) segment 2 (PB1) 3928.9 0.000000e+00 2221/2268 (97%) EPI568746 A/chicken/Tianjin/61/2012 (A/H9N2) segment 2 (PB1) 3928.9 0.000000e+00 2226/2275 (97%) EPI680671 A/quail/Zhejiang/A2/2013 (A/H9N2) segment 2 (PB1) 3923.4 0.000000e+00 2224/2274 (97%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884218 A/Hong Kong/214/2017 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI874334 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 3 (PA) 3951.1 0.000000e+00 2147/2151 (99%) EPI693856 A/Shenzhen/TH003/2016(H5N6) (A/H5N6) segment 3 (PA) 3912.3 0.000000e+00 2140/2151 (99%) EPI628748 A/Anhui/33225/2015 (A/H7N9) segment 3 (PA) 3868.0 0.000000e+00 2132/2151 (99%) EPI869669 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%) EPI628700 A/Environment/Hunan/07626/2015 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI627013 A/Jiangsu/18828/2014 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI838067 A/chicken/Shandong/SIC34/2014 (A/H9N2) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI628716 A/Environment/Guangxi/06891/2014 (A/H7N9) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI692495 A/duck/Hubei/S2227/2012 (A/H4N2) segment 3 (PA) 3779.4 0.000000e+00 2117/2152 (98%) EPI691871 A/chicken/Anhui/w107/2011 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2110/2143 (98%) EPI661507 A/environment/Guangdong/04.23 DGQTXC055/2015(Mixed) (A/H5N6) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%) EPI627189 A/Guangdong/15SF020/2015 (A/H7N9) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%) EPI529225 A/chicken/Shanghai/C/2011 (A/H9N2) segment 3 (PA) 3768.3 0.000000e+00 2115/2152 (98%) EPI466406 A/chicken/Jiangsu/MYJMF/2012 (A/H9N2) segment 3 (PA) 3768.3 0.000000e+00 2115/2152 (98%) EPI691877 A/chicken/Henan/322/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI627069 A/Guangdong/15SF050/2015 (A/H7N9) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI594046 A/chicken/Jiangsu/XZ0616/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI572883 A/chicken/Shandong/qd0427/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI497525 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2114/2152 (98%) EPI515821 A/Chicken/Suzhou/097-2/2013 (A/H9N2) segment 3 (PA) 3760.9 0.000000e+00 2111/2148 (98%) EPI661915 A/chicken/Guangdong/04.15 SZBAXQ019/2015(H5N6) (A/H5N6) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI661427 A/chicken/Guangdong/04.16 LGWL013/2015(Mixed) (A/H5N6) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI580386 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%) EPI572890 A/chicken/Shaanxi/xa0414/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI497541 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI466382 A/chicken/Jiangsu/CZYWP/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2113/2152 (98%) EPI838040 A/chicken/Hubei/SIC3/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI580370 A/Chicken/Guangdong/CZ145/2015 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI572896 A/chicken/Hebei/1024/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI568776 A/chicken/Shandong/qd1115/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI497532 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI466270 A/chicken/Jiangsu/WJHRG/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI457673 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2112/2152 (98%) EPI580378 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%) EPI572876 A/chicken/Shandong/qd1224/2012 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI568778 A/chicken/Shandong/qd0107/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI568777 A/chicken/Shandong/qd0307/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2111/2152 (98%) EPI691903 A/pigeon/Hubei/269/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2106/2146 (98%) EPI691901 A/pigeon/Hubei/228/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2102/2140 (98%) EPI680745 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI680744 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI594071 A/chicken/Jiangsu/WJ58/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2112/2154 (98%) EPI577337 A/chicken/Wenzhou/3330/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI572898 A/chicken/Hebei/0109/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI532335 A/chicken/Zhejiang/C497/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI497516 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI466294 A/chicken/Jiangsu/XZMG/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%) EPI691923 A/pigeon/Shanxi/87/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2103/2143 (98%) EPI680743 A/chicken/Zhejiang/C493/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI598801 A/chicken/Jiangxi/6741/2013 (A/H0) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI594023 A/chicken/Shandong/0613/2012 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI572893 A/chicken/Liaoning/0517/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI557657 A/duck/Zhejiang/D485/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI532334 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI532292 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI497847 A/environment/Zhenjiang/4/2013 (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI497499 A/environment/Chongqing/00516/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI466454 A/chicken/Jiangsu/ZJ4/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI450830 A/quail/Hangzhou/35/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2109/2152 (98%) EPI760825 A/chicken/Guangdong/10.16 SZLGKQHY-072/2015 (A/H5N6) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%) EPI654367 A/Environment/GD-QY_201/H9N2/2014-5 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2083/2115 (98%) EPI572885 A/chicken/Shandong/qd0225/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487858 A/chicken/Rizhao/1436/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487857 A/chicken/Rizhao/1363/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487854 A/chicken/Rizhao/853/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487853 A/chicken/Rizhao/811/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2109/2153 (97%) EPI487840 A/chicken/Wenzhou/614/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487828 A/chicken/Wenzhou/666/2013 (A/H7N7) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI468351 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI466492 A/chicken/Jiangsu/CZ1/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI466342 A/chicken/Jiangsu/XZWHL/2012 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI443658 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3729.5 0.000000e+00 2108/2152 (97%) EPI487839 A/chicken/Wenzhou/606/2013 (A/H9N2) segment 3 (PA) 3725.8 0.000000e+00 2107/2152 (97%) EPI838050 A/chicken/Guangxi/SIC15/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI729792 A/chicken/Shanghai/02/2015 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2110/2155 (97%) EPI691900 A/pigeon/Hubei/227/2012 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2101/2143 (98%) EPI680742 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680740 A/chicken/Zhejiang/C485/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680736 A/pigeon/Zhejiang/P5/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680735 A/pigeon/Zhejiang/P4/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680734 A/pigeon/Zhejiang/P3/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680724 A/quail/Zhejiang/A2/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI680723 A/quail/Zhejiang/A1/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI654149 A/Environment/GD-ZS_162/H7N9/2014-5 (A/H7N9) segment 3 (PA) 3724.0 0.000000e+00 2082/2115 (98%) EPI599274 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599268 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599266 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599226 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599225 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599222 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI599220 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598795 A/chicken/Jiangxi/36240/2013 (A/H0) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598714 A/chicken/Jiangxi/36266/2013 (A/H0) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598622 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598458 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598452 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598441 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI598347 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) EPI577063 A/chicken/Shenzhen/1047/2013 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2107/2152 (97%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884215 A/Hong Kong/214/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI838112 A/chicken/Guangdong/SIC37/2015 (A/H9N2) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI843857 A/environment/Zhongshan/ZS201505/2015 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1483/1497 (99%) EPI654455 A/Environment/GD-CH_68/H9N2/2015-1 (A/H9N2) segment 5 (NP) 2688.0 0.000000e+00 1481/1494 (99%) EPI627698 A/Guangdong-Guangzhou/XN08763/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597592 A/chicken/Dongguan/1433/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597575 A/chicken/Dongguan/1415/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597559 A/chicken/Dongguan/1393/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597552 A/chicken/Dongguan/1382/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597543 A/chicken/Dongguan/1373/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597527 A/chicken/Dongguan/1318/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597513 A/chicken/Dongguan/1307/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597374 A/chicken/Dongguan/934/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597325 A/chicken/Dongguan/836/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597304 A/chicken/Dongguan/803/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597097 A/chicken/Dongguan/1523/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI597085 A/silkie chicken/Dongguan/1516/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596995 A/chicken/Dongguan/1418/2014 (A/H0) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596955 A/silkie chicken/Dongguan/1264/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596927 A/chicken/Dongguan/1057/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596855 A/chicken/Dongguan/856/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596818 A/chicken/Dongguan/584/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI596790 A/chicken/Dongguan/449/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI592202 A/chicken/Dongguan/1096/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI583319 A/chicken/Dongguan/4040/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581973 A/silkie chicken/Dongguan/4126/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581959 A/chicken/Dongguan/4102/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581943 A/chicken/Dongguan/4063/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581936 A/chicken/Dongguan/4048/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581929 A/chicken/Dongguan/4037/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581908 A/chicken/Dongguan/3972/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI581681 A/silkie chicken/Dongguan/3281/2013 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI578179 A/chicken/Dongguan/1533/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI578172 A/chicken/Dongguan/1527/2014 (A/H7N9) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%) EPI656149 A/GD-121/2014/H7N9/2014-02-19 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1477/1494 (98%) EPI628505 A/Guangdong/24999/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628481 A/Guangdong/02125/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628473 A/Guangdong/033/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628417 A/Guangdong/037/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628121 A/Guangdong/0031/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI628113 A/Guangdong/0029/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627778 A/Guangdong-Guangzhou/XN00175/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627730 A/Guangdong-Guangzhou/XN06587/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627722 A/Guangdong/0024/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627666 A/Guangdong-Guangzhou/XN02778/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627634 A/Guangdong-Guangzhou/XN09086/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597497 A/silkie chicken/Dongguan/1271/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597475 A/chicken/Dongguan/1188/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597434 A/silkie chicken/Dongguan/994/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597413 A/silkie chicken/Dongguan/968/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597382 A/silkie chicken/Dongguan/966/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597339 A/chicken/Dongguan/850/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597332 A/chicken/Dongguan/843/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597311 A/chicken/Dongguan/815/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597295 A/chicken/Dongguan/795/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597266 A/chicken/Dongguan/748/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597259 A/chicken/Dongguan/744/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597245 A/chicken/Dongguan/709/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597238 A/silkie chicken/Dongguan/634/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597139 A/chicken/Dongguan/1666/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597125 A/chicken/Dongguan/1619/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597028 A/silkie chicken/Dongguan/1450/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI597015 A/silkie chicken/Dongguan/1448/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596980 A/chicken/Dongguan/1312/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596967 A/silkie chicken/Dongguan/1274/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596961 A/silkie chicken/Dongguan/1268/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI596863 A/chicken/Dongguan/891/2014 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI592209 A/chicken/Dongguan/1358/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583312 A/chicken/Dongguan/4064/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583292 A/chicken/Dongguan/4119/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI583250 A/Shenzhen/SP-W1/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI582362 A/chicken/Dongguan/4195/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581992 A/silkie chicken/Dongguan/4129/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581986 A/silkie chicken/Dongguan/4128/2013 (A/H0) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581950 A/chicken/Dongguan/4094/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581923 A/silkie chicken/Dongguan/3990/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581757 A/silkie chicken/Dongguan/3526/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581745 A/silkie chicken/Dongguan/3522/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581739 A/silkie chicken/Dongguan/3520/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581732 A/chicken/Dongguan/3491/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581725 A/chicken/Dongguan/3488/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581704 A/chicken/Dongguan/3438/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581693 A/chicken/Dongguan/3418/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581650 A/chicken/Dongguan/3219/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581644 A/silkie chicken/Dongguan/3166/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581637 A/chicken/Dongguan/3146/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581630 A/chicken/Dongguan/3145/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581623 A/chicken/Dongguan/3141/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI581610 A/silkie chicken/Dongguan/3049/2013 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578193 A/silkie chicken/Dongguan/1641/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578153 A/silkie chicken/Dongguan/1519/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578146 A/chicken/Dongguan/1100/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578134 A/silkie chicken/Dongguan/953/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578086 A/chicken/Shenzhen/138/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578079 A/chicken/Dongguan/575/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578023 A/Shenzhen/SP116/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI578016 A/Shenzhen/SP113/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI509881 A/Hong Kong/8113530/2014 (A/H7N9) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%) EPI627738 A/Guangdong/0010/2014 (A/H7N9) segment 5 (NP) 2662.1 0.000000e+00 1478/1497 (98%) EPI656087 A/GD-104/2014/H7N9/2014-02-11 (A/H7N9) segment 5 (NP) 2660.3 0.000000e+00 1476/1494 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Align Segment-ID Name Score E-Value Identity EPI884216 A/Hong Kong/214/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI628362 A/Zhejiang/3/2014 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%) EPI602360 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI602293 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601957 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601850 A/chicken/Jiangxi/31860/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601592 A/chicken/Jiangxi/1214/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601581 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601563 A/chicken/Jiangxi/36247/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601331 A/chicken/Jiangxi/1255/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601270 A/chicken/Jiangxi/1269/2014 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI601218 A/chicken/Jiangxi/36293/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599792 A/chicken/Jiangxi/36226/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599767 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI599569 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI596750 A/chicken/Jiangxi/30801/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI584150 A/chicken/Jiangxi/S3612/2013 (A/H10N8) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578064 A/chicken/Jiangxi/33621/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578055 A/chicken/Jiangxi/33583/2013 (A/H0) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI578047 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI559411 A/Hong Kong/2550/2015 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530512 A/Environment/Jiangxi/10726/2014 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530482 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI530464 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%) EPI846043 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681039 A/chicken/Zhejiang/4C91/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI628762 A/Zhejiang/8/2015 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI627059 A/Guangdong/15SF053/2015 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620132 A/Anhui/1-BALF_RG18/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620125 A/Anhui/1-BALF_RG17/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620122 A/Anhui/1-BALF_RG32/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620115 A/Anhui/1-BALF_RG31/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620108 A/Anhui/1-BALF_RG29/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620101 A/Anhui/1-BALF_RG21/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620096 A/Anhui/1-BALF_RG44/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620089 A/Anhui/1-BALF_RG43/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620082 A/Anhui/1-BALF_RG42/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620075 A/Anhui/1-BALF_RG41/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620068 A/Anhui/1-BALF_RG40/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620057 A/Anhui/1-BALF_RG1/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620050 A/Anhui/1-BALF_RG45/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620043 A/Anhui/1-BALF_RG5/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620036 A/Anhui/1-BALF_RG4/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620029 A/Anhui/1-BALF_RG3/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI620022 A/Anhui/1-BALF_RG2/2013 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) Link to comment Share on other sites More sharing options...
niman Posted January 20, 2017 Author Report Share Posted January 20, 2017 Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=18hzYEnr0cRj2MpRMciJAN_b2e6s&ll=22.339874123626217%2C114.13308517196651&z=17 Link to comment Share on other sites More sharing options...
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