niman Posted January 25, 2017 Report Share Posted January 25, 2017 WHO Chinese National Influenza Center has released a full 2017 H7N9 sequence, A/Hunan/02285/2017, (at GISAID) from 81M case in Hunan. Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887644 A/Hunan/02285/2017 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%) EPI887804 A/Zhejiang/6/2016 (A/H7N9) segment 4 (HA) 3066.6 0.000000e+00 1675/1683 (99%) EPI887828 A/Jiangsu/60466/2016 (A/H7N9) segment 4 (HA) 3053.6 0.000000e+00 1673/1683 (99%) EPI833714 A/Fujian/3/2016 (A/H7N9) segment 4 (HA) 3048.1 0.000000e+00 1672/1683 (99%) EPI740738 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 4 (HA) 3048.1 0.000000e+00 1672/1683 (99%) EPI874338 A/Hong Kong/VB17002884/2017 (A/H7N9) segment 4 (HA) 3037.0 0.000000e+00 1670/1683 (99%) EPI869673 A/Hong Kong/VB16184091/2016 (A/H7N9) segment 4 (HA) 3031.5 0.000000e+00 1669/1683 (99%) EPI712926 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 4 (HA) 3031.5 0.000000e+00 1669/1683 (99%) EPI888084 A/Fujian/54840/2016 (A/H7N9) segment 4 (HA) 3020.4 0.000000e+00 1667/1683 (99%) EPI888076 A/Anhui/60926/2016 (A/H7N9) segment 4 (HA) 3020.4 0.000000e+00 1667/1683 (99%) EPI627017 A/Jiangsu/18828/2014 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1659/1683 (98%) EPI627513 A/Environment/Jiangsu/98337/2014 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%) EPI621120 A/Quzhou/1/2015 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%) EPI566108 A/XinjiangBintuan/99118/2014 (A/H7N9) segment 4 (HA) 2970.5 0.000000e+00 1658/1683 (98%) EPI566138 A/Jiangsu/06307/2014 (A/H7N9) segment 4 (HA) 2966.8 0.000000e+00 1657/1683 (98%) EPI628800 A/Fujian/28/2015 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI627441 A/Anhui/01887/2014 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI627177 A/Zhejiang/5/2015 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI621127 A/Quzhou/2/2015 (A/H7N9) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI593581 A/chicken/Jiangxi/18524/2014 (A/H0) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI593396 A/chicken/Jiangxi/18035/2014 (A/H0) segment 4 (HA) 2965.0 0.000000e+00 1657/1683 (98%) EPI708010 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI707997 A/chicken/Shanghai/S3167/2014 (A/H7N9) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI707995 A/chicken/Shanghai/S3123/2014 (A/H7) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI707994 A/chicken/Shanghai/S3090/2014 (A/H7N9) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI707989 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI707987 A/chicken/Shanghai/S3065/2014 (A/H7N9) segment 4 (HA) 2961.3 0.000000e+00 1652/1676 (98%) EPI627832 A/Xinjiang/75802/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI621115 A/chicken/Quzhou/2/2015 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593541 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI593521 A/chicken/Jiangxi/18500/2014 (A/H0) segment 4 (HA) 2959.5 0.000000e+00 1657/1684 (98%) EPI593447 A/chicken/Jiangxi/18470/2014 (A/H0) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI592592 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI592568 A/chicken/Jiangxi/13540/2014 (A/H0) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI592460 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI592281 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI592274 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 4 (HA) 2959.5 0.000000e+00 1656/1683 (98%) EPI682923 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI628832 A/Zhejiang/9/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI628632 A/Environment/Guangdong/21275/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI627465 A/Fujian/2/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI627385 A/Guangdong/02497/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI627305 A/Fujian/11/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI627265 A/Guangdong/15SF021/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI627137 A/Zhejiang/1/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI593388 A/chicken/Jiangxi/18012/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592607 A/chicken/Jiangxi/13554/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592532 A/chicken/Jiangxi/13526/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592524 A/chicken/Jiangxi/13525/2014 (A/H0) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592515 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592484 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI566084 A/Guizhou/03240/2015 (A/H7N9) segment 4 (HA) 2953.9 0.000000e+00 1655/1683 (98%) EPI592508 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 4 (HA) 2952.1 0.000000e+00 1654/1683 (98%) EPI707986 A/chicken/Shanghai/S3064/2014 (A/H7N9) segment 4 (HA) 2950.2 0.000000e+00 1650/1676 (98%) EPI769575 A/Fujian/16/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI769567 A/Fujian/10/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI692632 A/Huai'an/002/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI692614 A/chicken/Huai'an/003/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI682919 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI682918 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI628640 A/Environment/Guangdong/21286/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI628600 A/Environment/Fujian/23611/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627920 A/Xinjiang/73030/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627912 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627257 A/Fujian/7/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627233 A/Fujian/23/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1655/1684 (98%) EPI627193 A/Guangdong/15SF020/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627113 A/Guangdong/15SF043/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627041 A/Fujian/6/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI627001 A/Guangdong/15SF080/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI626985 A/Jiangsu/22184/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593607 A/chicken/Jiangxi/18527/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593593 A/chicken/Jiangxi/18526/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593570 A/chicken/Jiangxi/18523/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593532 A/chicken/Jiangxi/18502/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593486 A/chicken/Jiangxi/18486/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593460 A/chicken/Jiangxi/18476/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593437 A/chicken/Jiangxi/18468/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593424 A/chicken/Jiangxi/18466/2014 (A/H0) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593405 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593167 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI593146 A/chicken/Jiangxi/14513/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI592632 A/chicken/Jiangxi/14023/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI592577 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI592244 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI580387 A/Chicken/Guangdong/SW154/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI580379 A/Chicken/Guangdong/SW153/2015 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI566076 A/Jiangsu/06306/2014 (A/H7N9) segment 4 (HA) 2948.4 0.000000e+00 1654/1683 (98%) EPI729459 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI729451 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI708012 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1645/1671 (98%) EPI703994 A/chicken/China/028/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI692631 A/Huai'an/074/2014 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI628728 A/Anhui/33228/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI628416 A/environment/Jiangsu/03137/2013 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI627225 A/Fujian/24/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI627217 A/Fujian/25/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI627105 A/Fujian/17/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI627073 A/Guangdong/15SF050/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98%) EPI627049 A/Guangdong/15SF081/2015 (A/H7N9) segment 4 (HA) 2942.8 0.000000e+00 1653/1683 (98% Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887643 A/Hunan/02285/2017 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%) EPI887803 A/Zhejiang/6/2016 (A/H7N9) segment 6 (NA) 2560.6 0.000000e+00 1394/1398 (99%) EPI887827 A/Jiangsu/60466/2016 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%) EPI626984 A/Jiangsu/22184/2015 (A/H7N9) segment 6 (NA) 2477.5 0.000000e+00 1379/1398 (98%) EPI627160 A/Zhejiang/3/2015 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1377/1398 (98%) EPI592276 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 6 (NA) 2466.4 0.000000e+00 1378/1399 (98%) EPI729461 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI707983 A/chicken/Shanghai/S3086/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI707982 A/chicken/Shanghai/S3085/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI707981 A/chicken/Shanghai/S3084/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI707904 A/duck/Jiangsu/J3619/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1376/1398 (98%) EPI683028 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI683027 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI593638 A/chicken/Jiangxi/19463/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI593625 A/chicken/Jiangxi/19426/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI593383 A/chicken/Jiangxi/18008/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592610 A/chicken/Jiangxi/13554/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592594 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592579 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592570 A/chicken/Jiangxi/13540/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592534 A/chicken/Jiangxi/13526/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592526 A/chicken/Jiangxi/13525/2014 (A/H0) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592517 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592510 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592486 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592462 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592283 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI592246 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI521919 A/Taiwan/2/2014 (A/H7N9) segment 6 (NA) 2460.9 0.000000e+00 1377/1399 (98%) EPI729453 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI707984 A/chicken/Shanghai/S3087/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI707980 A/chicken/Shanghai/S3075/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI707902 A/chicken/Shanghai/S3630/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI707889 A/chicken/Shanghai/S3169/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI707888 A/chicken/Shanghai/S3167/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI707887 A/chicken/Shanghai/S3140/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI627919 A/Xinjiang/73030/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI627911 A/Environment/Xinjiang/73033/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI627440 A/Anhui/01887/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI593583 A/chicken/Jiangxi/18524/2014 (A/H0) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI593543 A/chicken/Jiangxi/18513/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI593453 A/chicken/Jiangxi/18470/2014 (A/H0) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI593400 A/chicken/Jiangxi/18035/2014 (A/H0) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI593132 A/chicken/Jiangxi/14502/2014 (A/H0) segment 6 (NA) 2455.3 0.000000e+00 1376/1399 (98%) EPI566137 A/Jiangsu/06307/2014 (A/H7N9) segment 6 (NA) 2455.3 0.000000e+00 1375/1398 (98%) EPI627480 A/Fujian/17/2014 (A/H7N9) segment 6 (NA) 2451.6 0.000000e+00 1375/1399 (98%) EPI769577 A/Fujian/16/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI707893 A/chicken/Shanghai/S3307/2014 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1374/1398 (98%) EPI683029 A/chicken/Wenzhou/HATSLG01/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI628807 A/Fujian/27/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI628767 A/Zhejiang/8/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1374/1398 (98%) EPI628735 A/Anhui/33223/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1374/1398 (98%) EPI627488 A/Fujian/19/2014 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI627312 A/Fujian/8/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI627296 A/Fujian/19/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI627280 A/Fujian/9/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI627176 A/Zhejiang/5/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1374/1398 (98%) EPI627104 A/Fujian/17/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI593526 A/chicken/Jiangxi/18500/2014 (A/H0) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI593255 A/chicken/Jiangxi/15492/2014 (A/H0) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI593176 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI593169 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI566130 A/Fujian/09273/2015 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI566099 A/XinjiangBintuan/99117/2014 (A/H7N9) segment 6 (NA) 2449.8 0.000000e+00 1375/1399 (98%) EPI628543 A/Beijing/40610/2015 (A/H7N9) segment 6 (NA) 2447.9 0.000000e+00 1373/1398 (98%) EPI769569 A/Fujian/10/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI712925 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI707977 A/chicken/Shanghai/S3061/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI707903 A/chicken/Shanghai/S3880/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI692616 A/Huai'an/002/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628799 A/Fujian/28/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI628703 A/Environment/Hunan/07626/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628655 A/Environment/Hunan/20986/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628583 A/Environment/Anhui/33248/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628551 A/Environment/Hunan/39719/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI628383 A/Zhejiang/1/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628351 A/Zhejiang/5/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI628191 A/Jiangsu/09389/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627592 A/Zhejiang/13/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627384 A/Guangdong/02497/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627352 A/Environment/Xinjiang/00347/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627344 A/Environment/Xinjiang/00344/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627256 A/Fujian/7/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627224 A/Fujian/24/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627216 A/Fujian/25/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627184 A/Zhejiang/33/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI627120 A/Guangdong/15SF030/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627096 A/Jiangsu/19758/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627040 A/Fujian/6/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627024 A/Guangdong/15SF027/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627016 A/Jiangsu/18828/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI627008 A/Jiangsu/19757/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI627000 A/Guangdong/15SF080/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI566083 A/Guizhou/03240/2015 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI566059 A/Environment/Xinjiang/98679/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1374/1399 (98%) EPI552401 A/Zhejiang/17/2014 (A/H7N9) segment 6 (NA) 2444.2 0.000000e+00 1373/1398 (98%) EPI707978 A/chicken/Shanghai/S3064/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI707976 A/chicken/Jiangsu/J3899/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI707973 A/chicken/Jiangsu/J3489/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) EPI707891 A/chicken/Shanghai/S3301/2014 (A/H7N9) segment 6 (NA) 2438.7 0.000000e+00 1372/1398 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887639 A/Hunan/02285/2017 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%) EPI712921 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%) EPI833717 A/Fujian/3/2016 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI729782 A/chicken/Shanghai/15/2015 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI682977 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI681159 A/chicken/Zhejiang/727192/2014 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI628555 A/Anhui/40094/2015 (A/H7N9) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%) EPI887799 A/Zhejiang/6/2016 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI682978 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI628747 A/Anhui/33225/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627260 A/Guangdong/15SF021/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627212 A/Fujian/25/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627132 A/Zhejiang/1/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627108 A/Guangdong/15SF043/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627044 A/Guangdong/15SF081/2015 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI627012 A/Jiangsu/18828/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593614 A/chicken/Jiangxi/18527/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593576 A/chicken/Jiangxi/18523/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593551 A/chicken/Jiangxi/18515/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593513 A/chicken/Jiangxi/18491/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593479 A/chicken/Jiangxi/18483/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593472 A/chicken/Jiangxi/18482/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593430 A/chicken/Jiangxi/18466/2014 (A/H0) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI593408 A/chicken/Jiangxi/18449/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI566071 A/Jiangsu/06306/2014 (A/H7N9) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%) EPI888079 A/Fujian/54840/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI846042 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838162 A/chicken/Jiangsu/SIC42/2015 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI838159 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769578 A/Fujian/16/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI769570 A/Fujian/10/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI740733 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI729780 A/chicken/Shanghai/02/2015 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI729462 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI729454 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI682985 A/chicken/Wenzhou/WZTSLG02/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI681155 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680963 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI680962 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628811 A/Zhejiang/11/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628403 A/environment/Jiangsu/03174/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI628019 A/Environment/Jiangsu/09386/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627308 A/Fujian/8/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627292 A/Fujian/19/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627252 A/Fujian/7/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627148 A/Zhejiang/34/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI627140 A/Zhejiang/35/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI593441 A/chicken/Jiangxi/18468/2014 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI592013 A/chicken/Shaoxing/5453/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI591998 A/chicken/Shaoxing/5195/2013 (A/H0) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI591990 A/chicken/Shaoxing/5088/2013 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI583126 A/chicken/Shaoxing/5186/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI566126 A/Fujian/09273/2015 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI531804 A/Taiwan/2/2014 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI529239 A/wild chicken/Shanghai/C1/2014 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%) EPI591973 A/chicken/Suzhou/4833/2013 (A/H0) segment 7 (MP) 1766.5 0.000000e+00 973/982 (99%) EPI846034 A/chicken/Anhui/AH120/2015 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI838148 A/chicken/Shandong/SIC24/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI769642 A/Fujian/22/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI769586 A/Fujian/18/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI682983 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI682982 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI681154 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI680978 A/chicken/Zhejiang/C58/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI680959 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI680940 A/quail/Zhejiang/2A1-6/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI639590 A/chicken/Hangzhou/174/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628787 A/Environment/Shandong-Taian/EV03/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628779 A/Shandong-Taian/01/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628675 A/Environment/Shandong-Taian/EV02/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628667 A/Environment/Shandong-Taian/EV01/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628603 A/Environment/Anhui/39280/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628563 A/Anhui/40095/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI628547 A/Environment/Hunan/39719/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI627356 A/Fujian/5/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI627220 A/Fujian/24/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI627156 A/Zhejiang/3/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI627100 A/Fujian/17/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI621117 A/chicken/Quzhou/2/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI602002 A/black chicken/Jiangxi/10139/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI601992 A/black chicken/Jiangxi/10136/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI601974 A/chicken/Jiangxi/10122/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI601533 A/chicken/Jiangxi/23772/2013 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI599582 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI594412 A/chicken/Rizhao/2658/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI594363 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI593565 A/chicken/Jiangxi/18517/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI593273 A/chicken/Jiangxi/15520/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI593256 A/chicken/Jiangxi/15492/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI593133 A/chicken/Jiangxi/14502/2014 (A/H0) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI592006 A/silkie chicken/Shaoxing/5371/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI583857 A/chicken/Rizhao/3052/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI583638 A/chicken/Dongguan/3186/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI576626 A/environment/Shanghai/PD-JZ-01/2014 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI566079 A/Guizhou/03240/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI560401 A/British Columbia/1/2015 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI553357 A/chicken/Hangzhou/410/2013 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI530501 A/Environment/Jiangxi/10663/2014 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI497876 A/Wuxi/4/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) EPI497860 A/Zhenjiang/1/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887641 A/Hunan/02285/2017 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI712923 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 1 (PB2) 4106.2 0.000000e+00 2261/2280 (99%) EPI628541 A/Beijing/40610/2015 (A/H7N9) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%) EPI729800 A/chicken/Shanghai/15/2015 (A/H9N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%) EPI628557 A/Anhui/40094/2015 (A/H7N9) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%) EPI683192 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%) EPI628749 A/Anhui/33225/2015 (A/H7N9) segment 1 (PB2) 4028.7 0.000000e+00 2247/2280 (98%) EPI601321 A/chicken/Jiangxi/1255/2014 (A/H0) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI600108 A/chicken/Jiangxi/21978/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI600087 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI600052 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI599500 A/chicken/Jiangxi/20506/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI599458 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI599423 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 1 (PB2) 4006.5 0.000000e+00 2243/2280 (98%) EPI888081 A/Fujian/54840/2016 (A/H7N9) segment 1 (PB2) 4004.7 0.000000e+00 2242/2280 (98%) EPI833701 A/Fujian/1/2016 (A/H7N9) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI602461 A/chicken/Jiangxi/3152/2014 (A/H10N8) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI602354 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI602117 A/chicken/Jiangxi/18474/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI602083 A/chicken/Jiangxi/20471/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI601024 A/chicken/Jiangxi/1289/2014 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI600101 A/chicken/Jiangxi/21468/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI600094 A/chicken/Jiangxi/20927/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI600073 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599786 A/chicken/Jiangxi/36226/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599733 A/chicken/Jiangxi/28563/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599528 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599493 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599472 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599465 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599444 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599416 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599408 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599394 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI599387 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI594358 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI591968 A/chicken/Suzhou/4833/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI583824 A/chicken/Suzhou/4954/2013 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI578056 A/chicken/Jiangxi/33621/2013 (A/H0) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI557811 A/Anser fabalis/China/HuBS428/2014 (A/H9N2) segment 1 (PB2) 4001.0 0.000000e+00 2242/2280 (98%) EPI601871 A/chicken/Jiangxi/36242/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2280 (98%) EPI601475 A/chicken/Jiangxi/36256/2013 (A/H0) segment 1 (PB2) 3999.1 0.000000e+00 2241/2280 (98%) EPI602064 A/chicken/Jiangxi/19967/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601970 A/chicken/Jiangxi/1271/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601930 A/chicken/Jiangxi/25941/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601920 A/chicken/Jiangxi/23273/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601911 A/chicken/Jiangxi/23241/2013 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601892 A/chicken/Jiangxi/1286/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601604 A/chicken/Jiangxi/1288/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601363 A/chicken/Jiangxi/1242/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601354 A/chicken/Jiangxi/1226/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601262 A/chicken/Jiangxi/1269/2014 (A/H0) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI600080 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI600066 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599814 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599747 A/chicken/Jiangxi/31856/2013 (A/H10N8) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599570 A/chicken/Jiangxi/29086/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599521 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599514 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599507 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599486 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599479 A/chicken/Jiangxi/20478/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599437 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599430 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI599401 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI583817 A/chicken/Suzhou/4837/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI583810 A/chicken/Suzhou/4822/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI537478 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI537469 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI530485 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI530415 A/Environment/Jiangxi/10615/2014 (A/H10N8) segment 1 (PB2) 3995.4 0.000000e+00 2241/2280 (98%) EPI601486 A/chicken/Jiangxi/36274/2013 (A/H0) segment 1 (PB2) 3991.7 0.000000e+00 2240/2280 (98%) EPI601332 A/chicken/Jiangxi/1257/2014 (A/H0) segment 1 (PB2) 3991.7 0.000000e+00 2240/2280 (98%) EPI837981 A/chicken/Shandong/SIC25/2014 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI602003 A/chicken/Jiangxi/23786/2013 (A/H0) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI601804 A/chicken/Jiangxi/36266/2013 (A/H0) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI601593 A/chicken/Jiangxi/1218/2014 (A/H0) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI601251 A/chicken/Jiangxi/1267/2014 (A/H0) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI600293 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI600279 A/chicken/Jiangxi/1232/2014 (A/H10N8) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI600059 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI599577 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI599451 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI594407 A/chicken/Rizhao/2658/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI589864 A/chicken/Jiangxi/19924/2013 (A/H10N8) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI583845 A/chicken/Suzhou/4965/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2239/2280 (98%) EPI583838 A/chicken/Suzhou/4960/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI583831 A/chicken/Suzhou/4957/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI578065 A/chicken/Jiangxi/36277/2013 (A/H9N2) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI530391 A/Environment/Jiangxi/03367/2013 (A/H10N8) segment 1 (PB2) 3989.9 0.000000e+00 2240/2280 (98%) EPI601311 A/chicken/Jiangxi/1250/2014 (A/H0) segment 1 (PB2) 3988.0 0.000000e+00 2239/2280 (98%) EPI596740 A/chicken/Jiangxi/30801/2013 (A/H0) segment 1 (PB2) 3986.2 0.000000e+00 2239/2280 (98%) EPI601862 A/chicken/Jiangxi/36227/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601852 A/chicken/Jiangxi/36223/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601571 A/chicken/Jiangxi/1206/2014 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601543 A/chicken/Jiangxi/36240/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601535 A/chicken/Jiangxi/36225/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601301 A/chicken/Jiangxi/1247/2014 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) EPI601211 A/chicken/Jiangxi/36293/2013 (A/H0) segment 1 (PB2) 3984.3 0.000000e+00 2240/2281 (98%) EPI599373 A/duck/Jiangxi/36505/2013 (A/H9N2) segment 1 (PB2) 3984.3 0.000000e+00 2239/2280 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887642 A/Hunan/02285/2017 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%) EPI628542 A/Beijing/40610/2015 (A/H7N9) segment 2 (PB1) 4080.4 0.000000e+00 2252/2274 (99%) EPI628558 A/Anhui/40094/2015 (A/H7N9) segment 2 (PB1) 4078.5 0.000000e+00 2252/2274 (99%) EPI712924 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI683149 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 2 (PB1) 4073.0 0.000000e+00 2251/2274 (98%) EPI887826 A/Jiangsu/60466/2016 (A/H7N9) segment 2 (PB1) 4067.4 0.000000e+00 2250/2274 (98%) EPI681061 A/chicken/Zhejiang/3C34/2014 (A/H9N2) segment 2 (PB1) 4050.8 0.000000e+00 2247/2274 (98%) EPI729457 A/Taiwan/4-CGMH2/2014 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI654357 A/Environment/GD-MZ_441/H9N2/2014-5 (A/H9N2) segment 2 (PB1) 4039.7 0.000000e+00 2243/2271 (98%) EPI627143 A/Zhejiang/35/2014 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI602187 A/chicken/Jiangxi/14512/2014 (A/H10N6) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI593250 A/chicken/Jiangxi/15492/2014 (A/H0) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI531801 A/Taiwan/2/2014 (A/H7N9) segment 2 (PB1) 4039.7 0.000000e+00 2245/2274 (98%) EPI729449 A/Taiwan/4-CGMH1/2014 (A/H7N9) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI703992 A/chicken/China/028/2014 (A/H7N9) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI681059 A/chicken/Zhejiang/3C14/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI681058 A/chicken/Zhejiang/3C9/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI654363 A/Environment/GD-MZ_445/H9N2/2014-5 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2242/2271 (98%) EPI654351 A/Environment/GD-MZ_439/H9N2/2014-5 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2242/2271 (98%) EPI652980 A/chicken/Qingdao/009/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI652978 A/chicken/Qingdao/007/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI652975 A/chicken/Qingdao/004/2014 (A/H9N2) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI627151 A/Zhejiang/34/2014 (A/H7N9) segment 2 (PB1) 4034.2 0.000000e+00 2244/2274 (98%) EPI681060 A/chicken/Zhejiang/3C28/2014 (A/H9N2) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI652991 A/chicken/Qingdao/020/2014 (A/H9N2) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI652986 A/chicken/Qingdao/015/2014 (A/H9N2) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI652982 A/chicken/Qingdao/011/2014 (A/H9N2) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI652979 A/chicken/Qingdao/008/2014 (A/H9N2) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592591 A/chicken/Jiangxi/13548/2014 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592531 A/chicken/Jiangxi/13526/2014 (A/H0) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592521 A/chicken/Jiangxi/13525/2014 (A/H0) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592514 A/chicken/Jiangxi/13524/2014 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592483 A/chicken/Jiangxi/13512/2014 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI592280 A/chicken/Jiangxi/13546/2014 (A/H7N9) segment 2 (PB1) 4028.7 0.000000e+00 2243/2274 (98%) EPI888082 A/Fujian/54840/2016 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI838237 A/Hunan/44557/2015 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI729797 A/chicken/Shanghai/15/2015 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2243/2275 (98%) EPI680524 A/Hunan/44558/2015 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI652983 A/chicken/Qingdao/012/2014 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI652972 A/chicken/Qingdao/001/2014 (A/H9N2) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI627247 A/Fujian/14/2015 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI593173 A/chicken/Jiangxi/14530/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI593166 A/chicken/Jiangxi/14518/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592576 A/chicken/Jiangxi/13543/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592507 A/chicken/Jiangxi/13521/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592498 A/chicken/Jiangxi/13520/2014 (A/H0) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592459 A/chicken/Jiangxi/13493/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592273 A/chicken/Jiangxi/13538/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI592243 A/chicken/Jiangxi/13513/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI576541 A/Shanghai/PD-01/2014 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI509113 A/Fujian/05/2013 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI457867 A/chicken/Jiangsu/SC035/2013 (A/H7N9) segment 2 (PB1) 4023.1 0.000000e+00 2242/2274 (98%) EPI838034 A/chicken/Jiangsu/SIC11/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI681071 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI680697 A/chicken/Zhejiang/C71921/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI680694 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI652990 A/chicken/Qingdao/019/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI652987 A/duck/Qingdao/016/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI652977 A/chicken/Qingdao/006/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2242/2275 (98%) EPI652976 A/chicken/Qingdao/005/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI652973 A/chicken/Qingdao/002/2014 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI628382 A/Zhejiang/1/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI628350 A/Zhejiang/5/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI627439 A/Anhui/01887/2014 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI594359 A/chicken/Qingdao/2044/2013 (A/H9N2) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI576593 A/chicken/Guangdong/SD1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI576592 A/chicken/Guangdong/G3/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI576591 A/chicken/Guangdong/G2/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI568751 A/goose/Jiangsu/1027/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI550523 A/Shanghai/Mix1/2014 (A/H0) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI545787 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI542310 A/Shanghai/MH01/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI509077 A/Beijing/02/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI508925 A/tree sparrow/Shanghai/01/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI504720 A/Shanghai/5190T/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI498096 A/Xuzhou/1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497916 A/Nanjing/7/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497908 A/Suzhou/5/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI497871 A/Wuxi/4/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI469192 A/chicken/Rizhao/515/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI467303 A/Wuxi/1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI460773 A/Nanjing/5/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457883 A/chicken/Guangdong/SD641/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457875 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457851 A/chicken/Jiangsu/SC537/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457779 A/chicken/Shanghai/S1410/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457747 A/chicken/Zhejiang/SD033/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457675 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457659 A/environment/Shanghai/S1438/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457643 A/homing pigeon/Jiangsu/SD184/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI457627 A/pigeon/Shanghai/S1423/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447960 A/Shanghai/3/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447950 A/Shanghai/4/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447876 A/Jiangsu/02/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447777 A/Shanghai/14/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447762 A/Shanghai/8/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI447636 A/Anhui/03/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI440691 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%) EPI592567 A/chicken/Jiangxi/13540/2014 (A/H0) segment 2 (PB1) 4015.7 0.000000e+00 2238/2274 (98%) EPI680698 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Descriptions Align Segment-ID Name Score E-Value Identity EPI887640 A/Hunan/02285/2017 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%) EPI887824 A/Jiangsu/60466/2016 (A/H7N9) segment 3 (PA) 3873.5 0.000000e+00 2133/2151 (99%) EPI681080 A/pigeon/Zhejiang/727044/2014 (A/H9N2) segment 3 (PA) 3829.2 0.000000e+00 2125/2151 (98%) EPI681079 A/pigeon/Zhejiang/77037/2014 (A/H9N2) segment 3 (PA) 3829.2 0.000000e+00 2125/2151 (98%) EPI683235 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 3 (PA) 3818.1 0.000000e+00 2123/2151 (98%) EPI872954 A/Hong Kong/VB16189623/2016 (A/H7N9) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI838075 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 3 (PA) 3812.6 0.000000e+00 2122/2151 (98%) EPI846038 A/chicken/Jiangsu/JS4539/2014 (A/H9N2) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI681091 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI627149 A/Zhejiang/34/2014 (A/H7N9) segment 3 (PA) 3807.1 0.000000e+00 2121/2151 (98%) EPI627509 A/Environment/Jiangsu/98337/2014 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI566135 A/Jiangsu/06307/2014 (A/H7N9) segment 3 (PA) 3801.5 0.000000e+00 2120/2151 (98%) EPI683242 A/chicken/Wenzhou/RAQL01/2015 (A/H7N9) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI683241 A/chicken/Wenzhou/RAQL18/2015 (A/H7N9) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI681089 A/chicken/Zhejiang/925018/2014 (A/H9N2) segment 3 (PA) 3796.0 0.000000e+00 2119/2151 (98%) EPI683240 A/duck/Wenzhou/RAQL10/2015 (A/H7N9) segment 3 (PA) 3792.3 0.000000e+00 2118/2151 (98%) EPI652791 A/chicken/Qingdao/011/2014 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI652790 A/chicken/Qingdao/010/2014 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI627141 A/Zhejiang/35/2014 (A/H7N9) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI599274 A/chicken/Jiangxi/19934/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI599268 A/chicken/Jiangxi/18946/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI599266 A/chicken/Jiangxi/18913/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI599225 A/chicken/Jiangxi/21481/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI599220 A/chicken/Jiangxi/20489/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI598714 A/chicken/Jiangxi/36266/2013 (A/H0) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI598458 A/chicken/Jiangxi/19407/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI598452 A/chicken/Jiangxi/18901/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI598441 A/chicken/Jiangxi/17913/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI598347 A/duck/Jiangxi/20147/2013 (A/H9N2) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI568385 A/chicken/Jiangxi/19912/2013 (A/H0) segment 3 (PA) 3790.4 0.000000e+00 2118/2151 (98%) EPI683236 A/chicken/Taizhou/TZJF05/2015 (A/H9N2) segment 3 (PA) 3786.8 0.000000e+00 2117/2151 (98%) EPI652789 A/chicken/Qingdao/009/2014 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI652787 A/chicken/Qingdao/007/2014 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI628556 A/Anhui/40094/2015 (A/H7N9) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI628404 A/environment/Jiangsu/03174/2013 (A/H7N9) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI628020 A/Environment/Jiangsu/09386/2013 (A/H7N9) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599278 A/chicken/Jiangxi/20457/2013 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599276 A/chicken/Jiangxi/20443/2013 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599272 A/chicken/Jiangxi/19436/2013 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599202 A/chicken/Jiangxi/19960/2013 (A/H10N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599196 A/chicken/Jiangxi/18933/2013 (A/H10N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI598694 A/chicken/Jiangxi/31860/2013 (A/H0) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI598659 A/chicken/Jiangxi/18474/2013 (A/H0) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI598466 A/chicken/Jiangxi/19898/2013 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI577183 A/chicken/Suzhou/4960/2013 (A/H9N2) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI568453 A/chicken/Jiangxi/23241/2013 (A/H0) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI568452 A/chicken/Jiangxi/1287/2014 (A/H0) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI568443 A/chicken/Jiangxi/23252/2013 (A/H10N8) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI568383 A/chicken/Jiangxi/18926/2013 (A/H0) segment 3 (PA) 3784.9 0.000000e+00 2117/2151 (98%) EPI599271 A/chicken/Jiangxi/18980/2013 (A/H9N2) segment 3 (PA) 3781.2 0.000000e+00 2116/2151 (98%) EPI729794 A/chicken/Shanghai/15/2015 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2117/2152 (98%) EPI681086 A/chicken/Zhejiang/727063/2014 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI652794 A/chicken/Qingdao/014/2014 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI652786 A/chicken/Qingdao/006/2014 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599275 A/chicken/Jiangxi/19981/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599273 A/chicken/Jiangxi/19448/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599270 A/chicken/Jiangxi/18957/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599269 A/chicken/Jiangxi/18952/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599267 A/chicken/Jiangxi/18922/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599226 A/chicken/Jiangxi/21984/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599224 A/chicken/Jiangxi/20976/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599223 A/chicken/Jiangxi/20482/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599207 A/chicken/Jiangxi/23773/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599193 A/chicken/Jiangxi/18399/2013 (A/H10N8) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599052 A/chicken/Jiangxi/1247/2014 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI598795 A/chicken/Jiangxi/36240/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI598791 A/chicken/Jiangxi/20420/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI598622 A/chicken/Jiangxi/1279/2014 (A/H10N8) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI598442 A/chicken/Jiangxi/18445/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI598440 A/chicken/Jiangxi/17403/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI577891 A/chicken/Jiangxi/33583/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI573371 A/chicken/Shanghai/015/2014 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568448 A/chicken/Jiangxi/28113/2013 (A/H10N8) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568445 A/chicken/Jiangxi/23274/2013 (A/H10N8) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568434 A/chicken/Jiangxi/29099/2013 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568401 A/chicken/Jiangxi/23786/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568386 A/chicken/Jiangxi/19967/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI568384 A/chicken/Jiangxi/18955/2013 (A/H0) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI530454 A/Environment/Jiangxi/03355/2014 (A/H9N2) segment 3 (PA) 3779.4 0.000000e+00 2116/2151 (98%) EPI599054 A/chicken/Jiangxi/1255/2014 (A/H0) segment 3 (PA) 3777.5 0.000000e+00 2115/2151 (98%) EPI599060 A/chicken/Jiangxi/36291/2013 (A/H0) segment 3 (PA) 3775.7 0.000000e+00 2115/2151 (98%) EPI888080 A/Fujian/54840/2016 (A/H7N9) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI838045 A/chicken/Fujian/SIC16/2014 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2116/2152 (98%) EPI729793 A/chicken/Shanghai/06/2015 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI652799 A/chicken/Qingdao/019/2014 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI652788 A/chicken/Qingdao/008/2014 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI627029 A/Zhejiang/6/2015 (A/H7N9) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599277 A/chicken/Jiangxi/20446/2013 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599222 A/chicken/Jiangxi/20935/2013 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599210 A/chicken/Jiangxi/23797/2013 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599208 A/chicken/Jiangxi/25970/2013 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599107 A/chicken/Jiangxi/36263/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599062 A/environment/Jiangxi/36468/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599057 A/chicken/Jiangxi/1269/2014 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI599049 A/chicken/Jiangxi/1242/2014 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI598796 A/chicken/Jiangxi/36247/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI598697 A/chicken/Jiangxi/36242/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI598693 A/chicken/Jiangxi/23273/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI598660 A/chicken/Jiangxi/19982/2013 (A/H0) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) EPI598647 A/duck/Jiangxi/36489/2013 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887637 A/Hunan/02285/2017 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%) EPI833715 A/Fujian/3/2016 (A/H7N9) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%) EPI740731 A/Hong Kong/VB16064646/2016 (A/H7N9) segment 5 (NP) 2693.5 0.000000e+00 1484/1497 (99%) EPI888069 A/Anhui/60926/2016 (A/H7N9) segment 5 (NP) 2682.5 0.000000e+00 1482/1497 (98%) EPI838117 A/chicken/Zhejiang/SIC40/2015 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%) EPI628761 A/Zhejiang/8/2015 (A/H7N9) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%) EPI627194 A/Guangdong/15SF017/2015 (A/H7N9) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%) EPI656299 A/GD-17/2015/H7N9/2015-01-11 (A/H7N9) segment 5 (NP) 2643.7 0.000000e+00 1474/1495 (98%) EPI838102 A/chicken/Zhejiang/SIC30/2014 (A/H9N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%) EPI838096 A/chicken/Zhejiang/SIC32/2014 (A/H9N2) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%) EPI683074 A/duck/Wenzhou/YJYF24/2015 (A/H7N9) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI681127 A/chicken/Zhejiang/925117/2014 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI680855 A/chicken/Zhejiang/C71916/2013 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI680854 A/chicken/Zhejiang/C71914/2013 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI680852 A/chicken/Zhejiang/C7195/2013 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI680839 A/quail/Zhejiang/2A6/2013 (A/H9N2) segment 5 (NP) 2616.0 0.000000e+00 1471/1498 (98%) EPI833706 A/Fujian/1/2016 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI712919 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI680862 A/chicken/Zhejiang/C19/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI680858 A/chicken/Zhejiang/C1/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI680857 A/chicken/Zhejiang/C71926/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI680853 A/chicken/Zhejiang/C7199/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI628553 A/Anhui/40094/2015 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI596698 A/chicken/Wenzhou/3280/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI596675 A/chicken/Wenzhou/2619/2013 (A/H0) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI583806 A/chicken/Shaoxing/5498/2013 (A/H9N2) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI509116 A/Fujian/05/2013 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI447717 A/Shandong/01/2013 (A/H7N9) segment 5 (NP) 2610.4 0.000000e+00 1470/1498 (98%) EPI683071 A/chicken/Taizhou/TZJF02/2015 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI681129 A/chicken/Zhejiang/925134/2014 (A/H9N2) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI680851 A/chicken/Zhejiang/C4910/2013 (A/H9N2) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI680850 A/chicken/Zhejiang/C496/2013 (A/H9N2) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI680848 A/chicken/Zhejiang/C489/2013 (A/H9N2) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638105 A/Anhui/1-YK_RG202/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638098 A/Anhui/1-YK_RG201/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638091 A/Anhui/1-YK_RG200/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638084 A/Anhui/1-YK_RG199/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638077 A/Anhui/1-YK_RG198/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638070 A/Anhui/1-YK_RG197/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638063 A/Anhui/1-YK_RG196/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638056 A/Anhui/1-YK_RG195/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638049 A/Anhui/1-YK_RG194/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638042 A/Anhui/1-YK_RG193/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638035 A/Anhui/1-YK_RG192/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638028 A/Anhui/1-YK_RG191/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638021 A/Anhui/1-YK_RG190/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638014 A/Anhui/1-YK_RG189/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638007 A/Anhui/1-YK_RG188/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI638000 A/Anhui/1-YK_RG187/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637993 A/Anhui/1-YK_RG186/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637986 A/Anhui/1-YK_RG185/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637979 A/Anhui/1-YK_RG184/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637972 A/Anhui/1-YK_RG183/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637965 A/Anhui/1-YK_RG182/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637958 A/Anhui/1-YK_RG181/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637951 A/Anhui/1-YK_RG180/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637944 A/Anhui/1-YK_RG179/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637937 A/Anhui/1-YK_RG178/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637930 A/Anhui/1-YK_RG177/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637923 A/Anhui/1-YK_RG176/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637916 A/Anhui/1-YK_RG174/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637909 A/Anhui/1-YK_RG173/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637902 A/Anhui/1-YK_RG172/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637895 A/Anhui/1-YK_RG171/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637888 A/Anhui/1-YK_RG170/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637881 A/Anhui/1-YK_RG169/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637874 A/Anhui/1-YK_RG168/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637867 A/Anhui/1-YK_RG167/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637860 A/Anhui/1-YK_RG166/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637832 A/Anhui/1-YK_RG162/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637825 A/Anhui/1-YK_RG161/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637818 A/Anhui/1-YK_RG160/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637811 A/Anhui/1-YK_RG159/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637804 A/Anhui/1-YK_RG158/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637797 A/Anhui/1-YK_RG157/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637776 A/Anhui/1-YK_RG154/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637769 A/Anhui/1-YK_RG153/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637762 A/Anhui/1-YK_RG152/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637755 A/Anhui/1-YK_RG151/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637748 A/Anhui/1-YK_RG150/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637741 A/Anhui/1-YK_RG149/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637734 A/Anhui/1-YK_RG148/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637727 A/Anhui/1-YK_RG147/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637720 A/Anhui/1-YK_RG146/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637713 A/Anhui/1-YK_RG145/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637706 A/Anhui/1-YK_RG144/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637699 A/Anhui/1-YK_RG143/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637692 A/Anhui/1-YK_RG142/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637685 A/Anhui/1-YK_RG141/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637484 A/Anhui/1-YK_RG113/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637477 A/Anhui/1-YK_RG112/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637470 A/Anhui/1-YK_RG111/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637463 A/Anhui/1-YK_RG110/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637456 A/Anhui/1-YK_RG109/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637449 A/Anhui/1-YK_RG108/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637421 A/Anhui/1-YK_RG104/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637414 A/Anhui/1-YK_RG103/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637407 A/Anhui/1-YK_RG102/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637400 A/Anhui/1-YK_RG101/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) EPI637393 A/Anhui/1-YK_RG100/2013 (A/H7N9) segment 5 (NP) 2604.9 0.000000e+00 1469/1498 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Align Segment-ID Name Score E-Value Identity EPI887638 A/Hunan/02285/2017 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%) EPI833709 A/Fujian/1/2016 (A/H7N9) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%) EPI712920 A/Hong Kong/VB16021618/2016 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI683106 A/duck/Wenzhou/YHQL64/2014 (A/H9N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI628554 A/Anhui/40094/2015 (A/H7N9) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%) EPI887822 A/Jiangsu/60466/2016 (A/H7N9) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI601495 A/chicken/Jiangxi/36274/2013 (A/H0) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI601485 A/chicken/Jiangxi/36256/2013 (A/H0) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI601210 A/chicken/Jiangxi/36291/2013 (A/H0) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI601033 A/chicken/Jiangxi/1289/2014 (A/H0) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI601023 A/chicken/Jiangxi/1203/2014 (A/H0) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%) EPI887798 A/Zhejiang/6/2016 (A/H7N9) segment 8 (NS) 1491.4 0.000000e+00 827/838 (98%) EPI628746 A/Anhui/33225/2015 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI602360 A/duck/Jiangxi/36485/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI602293 A/duck/Jiangxi/36501/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601957 A/chicken/Jiangxi/1208/2014 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601850 A/chicken/Jiangxi/31860/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601592 A/chicken/Jiangxi/1214/2014 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601581 A/chicken/Jiangxi/1206/2014 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601563 A/chicken/Jiangxi/36247/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601331 A/chicken/Jiangxi/1255/2014 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601270 A/chicken/Jiangxi/1269/2014 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI601218 A/chicken/Jiangxi/36293/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI599792 A/chicken/Jiangxi/36226/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI599767 A/chicken/Jiangxi/33542/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI599569 A/chicken/Jiangxi/29075/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI596750 A/chicken/Jiangxi/30801/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI585986 A/Shanghai/ION/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI584150 A/chicken/Jiangxi/S3612/2013 (A/H10N8) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI578064 A/chicken/Jiangxi/33621/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI578055 A/chicken/Jiangxi/33583/2013 (A/H0) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI578047 A/chicken/Jiangxi/33552/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI530512 A/Environment/Jiangxi/10726/2014 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI530482 A/Environment/Jiangxi/03501/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI530464 A/Environment/Jiangxi/03470/2013 (A/H9N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI469536 A/Jiangsu/1/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI453608 A/Nanjing/1/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI451327 A/Shanghai/Patient3/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI447819 A/Shanghai/06-A/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI447767 A/Shanghai/17/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI447669 A/Jiangsu/07/2013 (A/H7N9) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%) EPI838189 A/chicken/Guangdong/SIC28/2014 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI764649 A/chicken/Jiaxing/4640/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI764619 A/chicken/Jiaxing/4490/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI764537 A/chicken/Huzhou/4034/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI729791 A/chicken/Shanghai/15/2015 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 822/832 (98%) EPI691661 A/chicken/Henan/141/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI691660 A/chicken/Henan/117/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI691659 A/chicken/Henan/114/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI681003 A/pigeon/Zhejiang/2P5/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI681002 A/pigeon/Zhejiang/2P4/2013 (A/H9N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI663522 A/pigeon/Wuxi/0405007/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI663499 A/duck/Sunan/040802/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI663498 A/duck/Wuxi/04030204/2013 (A/H0) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636948 A/Anhui/1-YK_RG39/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636941 A/Anhui/1-YK_RG38/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636934 A/Anhui/1-YK_RG37/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636918 A/Anhui/1-YK_RG35/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636911 A/Anhui/1-YK_RG34/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636881 A/Anhui/1-YK_RG30/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636874 A/Anhui/1-YK_RG29/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636867 A/Anhui/1-YK_RG28/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636860 A/Anhui/1-YK_RG27/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636853 A/Anhui/1-YK_RG26/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636844 A/Anhui/1-YK_RG25/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636837 A/Anhui/1-YK_RG24/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636830 A/Anhui/1-YK_RG23/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636823 A/Anhui/1-YK_RG22/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636816 A/Anhui/1-YK_RG21/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636809 A/Anhui/1-YK_RG20/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636798 A/Anhui/1-YK_RG19/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636791 A/Anhui/1-YK_RG18/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636784 A/Anhui/1-YK_RG17/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636777 A/Anhui/1-YK_RG16/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636770 A/Anhui/1-YK_RG15/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636763 A/Anhui/1-YK_RG14/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636756 A/Anhui/1-YK_RG13/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636749 A/Anhui/1-YK_RG12/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636742 A/Anhui/1-YK_RG10/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636734 A/Anhui/1-YK_RG09/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636726 A/Anhui/1-YK_RG08/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636719 A/Anhui/1-YK_RG07/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636712 A/Anhui/1-YK_RG06/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636705 A/Anhui/1-YK_RG05/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636698 A/Anhui/1-YK_RG04/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636691 A/Anhui/1-YK_RG03/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636684 A/Anhui/1-YK_RG02/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI636677 A/Anhui/1-YK_RG01/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI628538 A/Beijing/40610/2015 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI628362 A/Zhejiang/3/2014 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI627603 A/Environment/Guangdong-Guangzhou/XN01070/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620203 A/Anhui/1-BALF_RG6/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620196 A/Anhui/1-JCVI1_RG3/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620189 A/Anhui/1-JCVI1_RG2/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620182 A/Anhui/1-JCVI1_RG1/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620171 A/Anhui/1-BALF_RG9/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620164 A/Anhui/1-BALF_RG8/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620157 A/Anhui/1-BALF_RG7/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620146 A/Anhui/1-BALF_RG20/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) EPI620139 A/Anhui/1-BALF_RG19/2013 (A/H7N9) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%) Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Map Update https://www.google.com/maps/d/edit?hl=en&hl=en&authuser=0&authuser=0&mid=18hzYEnr0cRj2MpRMciJAN_b2e6s&ll=28.52128066472157%2C110.98772297187497&z=7 Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 Isolate name: A/Hunan/02285/2017 Isolate ID: EPI_ISL_242846 Passage details/history: E1 Type: A / H7N9 Lineage: Sample information Collection date: 2017-01-08 Host Human Additional host information: Zip code: Patient status: Last vaccinated: In-vivo pathogenicity test: Location: China Additional location information: Hunan Patient age: 81 Year(s) Gender: Male Outbreak: Treatment: Specimen source: Institute information Originating lab: Sample ID given by the sample provider: Address: Submitting lab: WHO Chinese National Influenza Center Sample ID given by the submitting laboratory: Authors: Wang,Dayan; Zhou,Shumei; Li,Xiyan; Li,Xiaodan; Zhang,Ye; Bo,Hong; Shu,Yuelong Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Publication Publication In vivo antiviral resistance Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures Adamantanes: Unknown Oseltamivir: Unknown Zanamivir: Unknown Peramivir: Unknown Other: Unknown Additional information Antigenic characterization: Note: Sequence segment identifier length accession # INSDC Sequence PB2 A_HUNAN_02285_2017_JAN-PB2 2280 EPI887641 PB1 A_HUNAN_02285_2017_JAN-PB1 2274 EPI887642 PA A_HUNAN_02285_2017_JAN-PA 2151 EPI887640 HA A_HUNAN_02285_2017_JAN-HA 1683 EPI887644 NP A_HUNAN_02285_2017_JAN-NP 1497 EPI887637 NA A_HUNAN_02285_2017_JAN-NA 1398 EPI887643 MP A_HUNAN_02285_2017_JAN-MP 982 EPI887639 NS A_HUNAN_02285_2017_JAN-NS 838 EPI887638 Submitter information Submitter: Yang, Lei Submission Date: 2017-01-25 Last modifier: Yang, Lei Last modified: 2017-01-25 Address: WHO Chinese National Influenza Center Virology Institute, Chinese CDC 155 Changbai Road, Changping District, Beijing 102206 China Link to comment Share on other sites More sharing options...
niman Posted January 25, 2017 Author Report Share Posted January 25, 2017 PB2 D701N Link to comment Share on other sites More sharing options...
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