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2020 Guangdong Pangolin 90% Identity With Human COVID Sequences


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Posted

Full sequence of a 2020 collection from a Guangdong Pangolin is 90% identical with human COVID sequences from patients in China and the United States

Posted (edited)

Characterization sheet for BetaCoV/pangolin/Guandong/1/2020 on deposit at GISAID

Virus detail
 
Virus name: BetaCoV/pangolin/Guandong/1/2020
Accession ID: EPI_ISL_410721
Type: betacoronavirus
Passage details/history: Original
Sample information
 
Collection date: 2020-02-16
Location: Asia / China / Guangdong
Host: Manis javanica
   
   
   
   
   
   
   
   
Edited by niman
Posted

Top 10 matches at Genbank

Sequences producing significant alignments:
Select for downloading or viewing reports Description Max Score Total Score Query Cover E value Per. Ident Accession
40450 40450 100% 0.0 90.18% MN938384.1
40446 40446 100% 0.0 90.18% MN997409.1
40446 40446 100% 0.0 90.18% MN985325.1
40441 40441 100% 0.0 90.17% MN975262.1
40437 40437 100% 0.0 90.17% MN988669.1
40437 40437 100% 0.0 90.17% MN988668.1
40437 40437 100% 0.0 90.17% NC_045512.2
40429 40429 100% 0.0 90.15% MN988713.1
40428 40428 100% 0.0 90.16% MN994468.1
40423 40423 100% 0.0 90.16% MN994467.1
Posted
14 hours ago, niman said:

Full sequence of a 2020 collection from a Guangdong Pangolin is 90% identical with human COVID sequences from patients in China and the United States

Thank you Doctor. 

What are the consequences of that finding? Sorry, I'm not an specialist in this matter. 

Many thanks 

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