niman Posted September 16, 2023 Report Posted September 16, 2023 USA/NY-CDC-LC1055462/2023 New York collected 8/23/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1
niman Posted September 16, 2023 Author Report Posted September 16, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.68234508746838%2C-74.88246234796276&z=8
niman Posted September 16, 2023 Author Report Posted September 16, 2023 USA/NY-CDC-LC1055462/2023 New York collected 8/23/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I
niman Posted September 16, 2023 Author Report Posted September 16, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.68234508746838%2C-74.88246234796276&z=8
niman Posted September 26, 2023 Author Report Posted September 26, 2023 USA/NY-CDC-LC1055462/2023 New York collected 8/23/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C1420T (nsp2)
niman Posted September 26, 2023 Author Report Posted September 26, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.68234508746838%2C-74.88246234796276&z=8
niman Posted September 28, 2023 Author Report Posted September 28, 2023 isolate SARS-CoV-2/Human/USA/NY-CDC-LC1055462/2023 collected by Laboratory Corporation of America collection date 2023-08-23 isolation source Nasal Swabs geographic location USA: New York host Homo sapiens host disease COVID-19 host sex female host age 43 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_gene_name_1 N1 gene diagnostic_pcr_protocol_1 Labcorp LDT diagnostic_pcr_Ct_value_1 20.377 diagnostic_gene_name_2 N2 gene diagnostic_pcr_protocol_2 Labcorp LDT diagnostic_pcr_Ct_value_2 17.732 diagnostic_gene_name_3 RP gene diagnostic_pcr_protocol_3 Labcorp LDT diagnostic_pcr_Ct_value_3 33.897 lineage/clade name BA.2.86 https://www.ncbi.nlm.nih.gov/biosample/SAMN37363732
niman Posted September 28, 2023 Author Report Posted September 28, 2023 USA/NY-CDC-LC1055462/2023 New York collected 8/23/23 43F Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C1420T (nsp2)
niman Posted September 28, 2023 Author Report Posted September 28, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.68234508746838%2C-74.88246234796276&z=8
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