niman Posted September 19, 2023 Report Posted September 19, 2023 PA-CDC-LC1057572/2023 Pennsylvania Collected 9/2/23 Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I
niman Posted September 19, 2023 Author Report Posted September 19, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.307740148079745%2C-76.65021318887914&z=8
niman Posted October 2, 2023 Author Report Posted October 2, 2023 isolate SARS-CoV-2/Human/USA/PA-CDC-LC1057572/2023 collected by Laboratory Corporation of America collection date 2023-09-02 isolation source Nasal Swabs geographic location USA: Pennsylvania host Homo sapiens host disease COVID-19 host sex female host age 75 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_gene_name_1 N1 gene diagnostic_pcr_protocol_1 Labcorp LDT diagnostic_pcr_Ct_value_1 19.788 diagnostic_gene_name_2 N2 gene diagnostic_pcr_protocol_2 Labcorp LDT diagnostic_pcr_Ct_value_2 17.483 diagnostic_gene_name_3 RP gene diagnostic_pcr_protocol_3 Labcorp LDT diagnostic_pcr_Ct_value_3 27.199 lineage/clade name BA.2.86 Submission CDC-OAMD; 2023-09-19 Accession: SAMN37447578 ID: 37447578 https://www.ncbi.nlm.nih.gov/biosample/SAMN37447578
niman Posted October 2, 2023 Author Report Posted October 2, 2023 PA-CDC-LC1057572/2023 Pennsylvania Collected 9/2/23 75F Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I
niman Posted October 2, 2023 Author Report Posted October 2, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.20510675312596%2C-75.66401861284179&z=13
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