Nineth BA.2.86 Sequence from New York

[niman]

NY-CDC-QDX84783166/2023

New York

9/5/23 collection

Spike ins16MPLF, V483del

NSP3 K1155R
BA.2.86.1

NSP2 Y441C

 

[niman]

map update

https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.6471479232209%2C-74.91860012382351&z=8

[niman]

isolate	SARS-CoV-2/Human/USA/NY-CDC-QDX84783166/2023
collected by	Quest Diagnostics Incorporated
collection date	2023-09-05
isolation source	Nasal Swabs
geographic location	USA: New York
host	Homo sapiens
host disease	COVID-19
host sex	male
host age	40
collection device	Nasal Swabs
collection method	Nasal Swabs
purpose of sequencing	baseline surveillance (random sampling)
host_race	Unknown
diagnostic_pcr_protocol_1	Roche
diagnostic_pcr_Ct_value_1	17
lineage/clade name	BA.2.86 https://www.ncbi.nlm.nih.gov/biosample/SAMN37536552

[niman]

NY-CDC-QDX84783166/2023

New York

9/5/23 collection

40M

Spike ins16MPLF, V483del

NSP3 K1155R
BA.2.86.1

NSP2 Y441C

[niman]

map update

https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=41.6471479232209%2C-74.91860012382351&z=8

[niman]

NY-CDC-QDX84783166/2023

New York

9/5/23 collection

40M

Spike ins16MPLF, V483del

NSP3 K1155R
BA.2.86.1

NSP2 Y441C

NSP14 S221A

[niman]

map update

https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.668168043518904%2C-74.33518879842407&z=9

[niman]

NY-CDC-QDX84783166/2023

New York

9/5/23 collection

40M

Spike ins16MPLF, V483del

NSP3 K1155R
BA.2.86.1

NSP2 Y441C

NSP1 H110Q

NSP8 S8F

NSP14 S221A

NSP14 N408K

C25549T (ORF3a)

T27134C ( M)

[niman]

map update

https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=40.751839246789814%2C-74.36265461873657&z=9