niman Posted September 30, 2023 Report Posted September 30, 2023 (edited) England/CLIMB-CM7YKF4X/2023 England 9/25/23 collection https://ukcovid.xyz/ba_2_86_daily.php Edited October 2, 2023 by niman
niman Posted September 30, 2023 Author Report Posted September 30, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.26791881132429%2C-0.09669472752421804&z=9
niman Posted October 1, 2023 Author Report Posted October 1, 2023 (edited) England/CLIMB-CM7YKF4X/2023 England 9/25/23 collection NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3) H/T @OliasDave Edited October 2, 2023 by niman
niman Posted October 1, 2023 Author Report Posted October 1, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.41256881921809%2C-0.13960374356757121&z=10
niman Posted October 2, 2023 Author Report Posted October 2, 2023 England/CLIMB-CM7YKF4X/2023 England 9/25/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3)
niman Posted October 2, 2023 Author Report Posted October 2, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.444357533429255%2C-0.03348049449034218&z=13
niman Posted October 6, 2023 Author Report Posted October 6, 2023 England/CLIMB-CM7YKF4X/2023 England 9/25/23 collection Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1 NSP3 T1269I C4456T (NSP3) C19524T (NSP14) Spike T572I N T391I
niman Posted October 6, 2023 Author Report Posted October 6, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=51.444357533429255%2C-0.03348049449034218&z=13
niman Posted October 6, 2023 Author Report Posted October 6, 2023 collection date 2023-09-25 geographic location United Kingdom host common name not provided host health state not provided host Homo sapiens host sex not provided host subject id not provided isolate not provided sample capture status active surveillance in response to outbreak sample name COG-UK/CLIMB-CM7YKF4X ENA-CHECKLIST ERC000033 INSDC center name Respiratory Virus Unit, Microbiology Services Colindale, Public Health England Submitter Id COG-UK/CLIMB-CM7YKF4X broker name COVID-19 Genomics UK Consortium collecting institution Respiratory Virus Unit, Microbiology Services Colindale, Public Health England collector name not provided definition for seropositive sample not provided geographic location (region and locality) England receipt date 2023-09-25 scientific_name Severe acute respiratory syndrome coronavirus 2 serotype (required for a seropositive sample) not provided virus identifier not provided Submission EBI; 2023-10-03 Accession: SAMEA114462397 ID: 37655664 https://www.ncbi.nlm.nih.gov/biosample/SAMEA114462397
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