niman Posted October 8, 2023 Report Posted October 8, 2023 (edited) USA/IN-CDC-QDX84403122/2023 Indiana 8/25/23 collection 80M https://www.ncbi.nlm.nih.gov/biosample/37399815 Edited October 11, 2023 by niman
niman Posted October 8, 2023 Author Report Posted October 8, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=39.89855905763443%2C-86.49371059765625&z=9
niman Posted October 8, 2023 Author Report Posted October 8, 2023 isolate SARS-CoV-2/Human/USA/IN-CDC-QDX84403122/2023 collected by Quest Diagnostics Incorporated collection date 2023-08-25 isolation source Nasal Swabs geographic location USA: Indiana host Homo sapiens host disease COVID-19 host sex male host age 82 collection device Nasal Swabs collection method Nasal Swabs purpose of sequencing baseline surveillance (random sampling) host_race Unknown diagnostic_pcr_protocol_1 Roche diagnostic_pcr_Ct_value_1 17 lineage/clade name BA.2.86 BioProject PRJNA716985 Severe acute respiratory syndrome coronavirus 2 Retrieve all samples from this project Submission Centers for Disease Control and Prevention; 2023-09-14 Accession: SAMN37399815 ID: 37399815 SRA
niman Posted October 11, 2023 Author Report Posted October 11, 2023 USA/IN-CDC-QDX84403122/2023 Indiana 8/25/23 collection 80M Spike ins16MPLF, V483del NSP3 K1155R BA.2.86.1
niman Posted October 11, 2023 Author Report Posted October 11, 2023 map update https://www.google.com/maps/d/u/1/edit?mid=1OCfYIWOx61CCNsWu-FDaiTeSYn066gY&ll=39.91630941817188%2C-86.17358458089056&z=14
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